Citrus Sinensis ID: 015872

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccccccccccEEEEEcccccccHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccccccEEEEcccccccccccHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHcccccccccccccccccccccccccccEccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccEEEEccccccccHHHHHccccEEEEEcccccccccHHccHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHccccccccEEEEccccccEEEccHHHHHHHHHHHHcccHHcccEEEccccccccHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHHccccHHHcccHHHHHHHHHHHHHHHHHHcccHcccccEEc
Coil and Loop (DISEMBL)
malrslptqlptrgnlhqphphhhmkgslswchtltplpllspsanslgkvcTQQMVVKcsagggtsgtvqavnmspgtpvrptsilvvgatgtLGRQIVRRALdegydvrclvrprpapadflrdwgatvvnadlskpetipatlVGVHTvidcatgrpeepikkvdwEGKVALIQCAKAMGIQKYVFYSIhncdkhpevplmeIKYCTEQflqdsglpHVIIRLCGFMQGligqyavpileeksvwgtdALTRIAYMDTQDIARLTFVALRNEkingrtltfsgprawttQEVITLCERlagqdanvtmVPVSVLRFTRQLTRFFEWTNDvadrlafsevltsdtvfsvpmsetfdllgvdaKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI
Flexible Loop (DISEMBL)
malrslptqlptrgnlhqpHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRaldegydvrcLVRPrpapadflrDWGATVVNADlskpetipatlvGVHTVIDCAtgrpeepikkvdwEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKingrtltfsgprawTTQEVITLCERLagqdanvtmVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI
Low Complexity Region (SEG)
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHtltplpllspsANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI
Disordered region (IsUnstruct)
***************************SLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVN*****PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK*************
Disordered Region (DISOPRED)
*************************************************************************************ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL*****************
Disordered Region (DISEMBL)
MALRSLPTQLPTRGNL***********SLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLK**********
Disordered Region (DISPRO)
******P***********************WCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAG******************RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ*DFYI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
P48279	321	Uncharacterized protein y	N/A	no	0.774	0.962	0.512	5e-92
P51238	319	Uncharacterized protein y	N/A	no	0.779	0.974	0.487	5e-90
Q1XDP9	319	Uncharacterized protein y	N/A	no	0.779	0.974	0.477	1e-86
O78472	314	Uncharacterized protein y	yes	no	0.766	0.974	0.473	2e-85
P49534	319	Uncharacterized protein y	N/A	no	0.774	0.968	0.435	6e-77
O19883	312	Uncharacterized protein y	N/A	no	0.759	0.971	0.353	2e-46
Q8KU07	286	NAD(P)H azoreductase OS=X	N/A	no	0.491	0.685	0.288	2e-12
Q54LW0	301	Prestalk A differentiatio	yes	no	0.498	0.661	0.270	2e-09
Q8H124	280	Uncharacterized protein A	no	no	0.393	0.560	0.266	7e-07
P52580	309	Isoflavone reductase homo	N/A	no	0.553	0.715	0.244	8e-07

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score =  338 bits (866), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 160/312 (51%), Positives = 219/312 (70%), Gaps = 3/312 (0%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           SILV+GATGTLGRQIVR ALDEGY VRCLVR     A FL++WGA ++  DLS+PE++  
Sbjct: 2   SILVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAA-FLKEWGAKLIWGDLSQPESLLP 60

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L G+  +ID +T RP +P  + +VD +GK ALI  AKAM I+K++F+SI N +K+ +VP
Sbjct: 61  ALTGIRVIIDTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKIEKFIFFSILNSEKYSQVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           LM IK  TE+ L++SGL + I +LCGF QGLIGQYAVPIL++++VW T   T IAYMDT 
Sbjct: 121 LMRIKTVTEELLKESGLNYTIFKLCGFFQGLIGQYAVPILDQQTVWITTESTSIAYMDTI 180

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           DIAR T  +L  ++ N R     G R+W + ++I LCERL+GQ+A VT VP++ L   R 
Sbjct: 181 DIARFTLRSLVLKETNNRVFPLVGTRSWNSADIIQLCERLSGQNAKVTRVPIAFLELARN 240

Query: 323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL 382
            + FFEW  ++ADRLAF+EVL+    F+  M E + +  +++     LE YLQ+YF+ IL
Sbjct: 241 TSCFFEWGWNIADRLAFTEVLSKSQFFNSSMDEVYKIFKIESTSTTILESYLQEYFSRIL 300

Query: 383 KKLKDLKAQSKQ 394
           K+LK++ +Q  Q
Sbjct: 301 KRLKEINSQQSQ 312

Cyanophora paradoxa (taxid: 2762)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score =  331 bits (849), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 153/314 (48%), Positives = 222/314 (70%), Gaps = 3/314 (0%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA +V  DL  PE+I  
Sbjct: 2   TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELVYGDLKLPESILQ 60

Query: 145 TLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  VID +T RP +P   +++D +GK+ALI+ AKA  +Q+++F+SI N D++P+VP
Sbjct: 61  SFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFSILNADQYPKVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           LM +K     +LQ S + + +  L GF QGLI QYA+PIL++KSVW T   T IAY+DTQ
Sbjct: 121 LMNLKSQVVNYLQKSSISYTVFSLGGFFQGLISQYAIPILDKKSVWVTGESTPIAYIDTQ 180

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           D A+L   +L       R L   G +AWT+ E+ITLCE+L+GQ   ++ +P+S+L+  R+
Sbjct: 181 DAAKLVIKSLGVPSTENRILPLVGNKAWTSAEIITLCEKLSGQKTQISQIPLSLLKALRK 240

Query: 323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL 382
           +T+  +WT +++DRLAF+EVLTS  +F  PM+E +++L +D  ++I+LEKY Q+YF  IL
Sbjct: 241 ITKTLQWTWNISDRLAFAEVLTSGEIFMAPMNEVYEILSIDKSEVISLEKYFQEYFGKIL 300

Query: 383 KKLKDLKAQSKQAD 396
           K LKD+  +  Q D
Sbjct: 301 KVLKDISYEQSQQD 314

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1

 Score =  320 bits (820), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 220/314 (70%), Gaps = 3/314 (0%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA ++  DL  PE+I  
Sbjct: 2   TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELIYGDLKLPESILQ 60

Query: 145 TLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  +ID +T R  +P   +K+D +GK+ALI+ AKA  +++++F+SI N +K+P+VP
Sbjct: 61  SFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFSILNSEKYPDVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           LM +K     FLQ S + +++  L GF QGLI QYA+PIL++KSVW T   T IAY+DTQ
Sbjct: 121 LMNLKSQVVDFLQKSNVKYIVFSLGGFFQGLINQYAIPILDKKSVWVTGESTPIAYIDTQ 180

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           D A+L   +L       RTL   G  AWT+ E+I LCE+L+GQ   ++ +P+ +L+  R+
Sbjct: 181 DAAKLVIKSLGVPSTENRTLPLVGNPAWTSAEIIKLCEKLSGQKTQISQIPIGLLKALRR 240

Query: 323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL 382
           +T+  +WT +++DRLAF+E+L+S   F+ PM E + +LG+D  ++I+LEKYLQ+YF  IL
Sbjct: 241 ITKTLQWTWNISDRLAFAEILSSGEQFTAPMDEVYSILGIDRLEVISLEKYLQEYFGKIL 300

Query: 383 KKLKDLKAQSKQAD 396
           K LKD+  +  Q D
Sbjct: 301 KVLKDITYEQGQQD 314

Porphyra yezoensis (taxid: 2788)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O78472|YCF39_GUITH Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1

 Score =  316 bits (810), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 219/315 (69%), Gaps = 9/315 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GATGTLGRQIVRRALDEGY+V CLVR     A FL++WGA ++  DLS PET+P 
Sbjct: 2   SLLVIGATGTLGRQIVRRALDEGYEVSCLVR-NLRKAYFLKEWGAELLYGDLSLPETLPT 60

Query: 145 TLVGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L  +  +ID +T RP +P K  K+D EGK+AL++ AK  GI+++VF+S+ N   +  +P
Sbjct: 61  NLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLNAQNYRHLP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L+ +K   E++LQ S L +   +L GF QGLI QYA+PILE++++W T   T+I Y+DT 
Sbjct: 121 LVNLKCRMEEYLQTSELEYTTFQLSGFFQGLISQYAIPILEKQTIWITGEYTKINYIDTN 180

Query: 263 DIARLTFVALRNEKING---RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRF 319
           DIA+    A+R+  +NG   RT+   G ++W ++E+I LCERL+GQ AN+T +P+ +L F
Sbjct: 181 DIAKF---AVRSLSLNGTIKRTIPLVGLKSWNSEEIIQLCERLSGQKANITKIPLQLLVF 237

Query: 320 TRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFT 379
            + LT FFEWT ++++RLAF+EVL +    +  M+ T+   G +  DI +LE Y+QDYF 
Sbjct: 238 FKYLTGFFEWTTNISERLAFAEVLNARQDITSEMASTYSQFGFEPNDITSLESYMQDYFG 297

Query: 380 NILKKLKDLKAQSKQ 394
            IL++LK+L  + ++
Sbjct: 298 RILRRLKELSDERER 312

Guillardia theta (taxid: 55529)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1

 Score =  288 bits (737), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 136/312 (43%), Positives = 202/312 (64%), Gaps = 3/312 (0%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+L++G TGTLGRQ+V +AL +GY VRCLVR     A+FL++WGA ++  DLS+PETIP 
Sbjct: 2   SLLIIGGTGTLGRQVVLQALTKGYQVRCLVR-NFRKANFLKEWGAELIYGDLSRPETIPP 60

Query: 145 TLVGVHTVIDCATGRPEE--PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L G+  VID +T RP +   +K+VDW+GK ALI+ A+A  ++ +VF S  N ++   +P
Sbjct: 61  CLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNIP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           LME+K+  E  LQ S +P+ + RL GF QGLI QYA+P+LE   +  T+  T ++YMDTQ
Sbjct: 121 LMEMKFGIETKLQQSNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTNENTCVSYMDTQ 180

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           DIA+    +L+  +   RT    G + W + E+I LCE+LAGQ A V  +P+ +L+   Q
Sbjct: 181 DIAKFCLRSLQLPETKNRTFVLGGQKGWVSSEIINLCEQLAGQSAKVNKIPLFLLKLVSQ 240

Query: 323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL 382
           +  FFEW  +++DRLAF+E+L  +  FS    + +    VD  +I  L+ Y  +YF  +L
Sbjct: 241 IFGFFEWGQNISDRLAFAEILNVENDFSKSTFDLYKTFKVDDSEITQLDDYFLEYFIRLL 300

Query: 383 KKLKDLKAQSKQ 394
           K+L+D+  +  Q
Sbjct: 301 KRLRDINFEDIQ 312

Odontella sinensis (taxid: 2839)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O19883|YCF39_CYACA Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 169/311 (54%), Gaps = 8/311 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GAT TLGRQIV++AL +GY+V+CLVR     A FL+ WGA +V  DL  PET+P 
Sbjct: 2   SLLVIGATSTLGRQIVKKALIQGYEVKCLVR-NSKKAAFLKAWGAILVYGDLMVPETLPQ 60

Query: 145 TLVGVHTVIDCATGRPEEPIKK--VDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
             VG   +ID +T + ++      VD   K A+++ A    ++K+V +S+ N  ++ +VP
Sbjct: 61  CFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTD--ALTRIAYMD 260
             +IK   ++ L  SG+ ++I    GF Q L  QYA PIL  + V+  +     +I+Y+D
Sbjct: 121 STKIKSDFDRALIKSGINYLIFTPLGFFQDLTSQYAAPILSSQPVFILEQSESVQISYID 180

Query: 261 TQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFT 320
            +D A +   A     +        G R+W    +I+LC+  AGQ + V  VP+ ++ F 
Sbjct: 181 ARDAANIVLAATSLAFLKNIDFPLIGNRSWNNVSIISLCQLYAGQASPVVTVPLLLVYFI 240

Query: 321 RQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTN 380
           R++  FF +T      L   E L+  +  S         L +  K + +LEKY Q YFT+
Sbjct: 241 RRILGFFAFTRQFYFYLTLVENLSRSSYLSFNHENENKFLKIYQKKLFSLEKYFQYYFTH 300

Query: 381 ILKKLKDLKAQ 391
              KL +LK Q
Sbjct: 301 ---KLGNLKKQ 308

Cyanidium caldarium (taxid: 2771)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 12/208 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILVVG TGT+G ++VR   +     + LVR   A A  L   G      DL +P T+PA 
Sbjct: 2   ILVVGGTGTIGSEVVRLLQEAKLPFKALVR-DAAKARELNARGVQTAAGDLREPRTLPAA 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
           L GV  V          P+     + + ALI  AK  G++ +V  +       P+ P+  
Sbjct: 61  LGGVDKVFVVT------PLVPDQVQMRAALITAAKTAGVKHFVMST--GIGAAPDSPVQI 112

Query: 206 IKYCTE--QFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
            ++  E  Q +Q+SG+    ++   FMQ L+  YA  I E+   +      +++++D +D
Sbjct: 113 GRWLGENQQQVQESGMAWTFVQPGFFMQNLL-MYAQAIREKGEFYMPLGEGKVSWIDARD 171

Query: 264 IARLTFVALRNEKINGRTLTFSGPRAWT 291
           IA +   AL       +    +GP+A +
Sbjct: 172 IAAVAVQALTKPGHENQAYPVTGPQALS 199

Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Uses preferentially NADPH rather than NADH as an electron donor for its activity. The enzyme reductively cleaved Orange II and carboxy-Orange II, and can also reduce several sulfonated structural analogs, which carry a hydroxy group in the 2 position of the naphthol ring.

Xenophilus azovorans (taxid: 151755)

EC: 1

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q54LW0|PADA_DICDI Prestalk A differentiation protein A OS=Dictyostelium discoideum GN=padA PE=3 SV=2

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 34/233 (14%)

Query: 85  SILVVGATGTLGRQIVR--RALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SILV G TG +GRQ+V+     ++  ++R   R +           +T    D   P T 
Sbjct: 11  SILVTGGTGVVGRQVVKSLELREKNINIRVGGRDQDKCNQLGFGKNSTFTRFDFMDPTTW 70

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
             +L GV  V   A      P K +        I+  K   ++K V  S+ + ++   VP
Sbjct: 71  DKSLEGVDRVFLIALPMDPTPEKSLG-----PFIEKCKERKLKKIVVLSVIDAER---VP 122

Query: 203 LMEIKYCTEQFLQDSGLPHVIIR--------LCGFMQGLI--GQYAVPILEEKSVWGTDA 252
           L++I    EQ +Q SGL  VI+R          GFM+  I  G   VP+ E    W    
Sbjct: 123 LVKI----EQMVQGSGLTFVILRPPFFSENFSEGFMKHDIDQGTIRVPVGEHSVNW---- 174

Query: 253 LTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ 305
                 + T DI     + L + K +GRT+  +GP+    +E+  +  +  G+
Sbjct: 175 ------ISTHDIGECASIVLMDSKFDGRTIEITGPKPINFKELSEVVSKNVGK 221

Involved in development and cell differentiation.

Dictyostelium discoideum (taxid: 44689)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 23/180 (12%)

Query: 72  AVNMSPG---TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDW 127
           ++ M  G     V+   + V GATG  G++IV + L  G+ V+  VR    A   F  D 
Sbjct: 32  SIKMEKGEAENAVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDP 91

Query: 128 GATVVNADLSK-PETIPATLVGVHTVIDCATG-RPEEPIK---KVDWEGKVALIQCAKAM 182
              +V AD+++ P+ +   +      + CATG RP   I    KVD  G V L+   +  
Sbjct: 92  SLQIVRADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQ 151

Query: 183 GIQKYVFYSIHNCDK-------HPEVPLMEI-------KYCTEQFLQDSGLPHVIIRLCG 228
           G++K+V  S    +        +P    + +       K   E++++ SG+ + I+R  G
Sbjct: 152 GVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGG 211

Arabidopsis thaliana (taxid: 3702)

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 28/249 (11%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVR----PRPAPADFLR---DWGATVVNADL 136
           + ILVVG TG LGR +V  +   G+    LVR      PA A  L+   D G T++  DL
Sbjct: 6   SKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDL 65

Query: 137 SKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
               ++ + + G   VI          +  +    +  L+   K  G  K  F S    D
Sbjct: 66  YDQASLVSAVKGADVVISV--------LGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLD 117

Query: 197 ------KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGL----IGQYAVP-ILEEK 245
                   P   ++  K    +  + +G+P+    + GF  G     +GQ   P    +K
Sbjct: 118 VDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYA-VAGFFAGFGLPKVGQVLAPGPPADK 176

Query: 246 SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERLAG 304
           +V   D  T+  +++  DIA  T +A  + +   + L    P    +  E+++L E+  G
Sbjct: 177 AVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTG 236

Query: 305 QDANVTMVP 313
           +      VP
Sbjct: 237 KTFRREYVP 245

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
224080772	399	predicted protein [Populus trichocarpa]	0.972	0.972	0.827	0.0
255586211	404	conserved hypothetical protein [Ricinus	0.994	0.982	0.805	0.0
147784532	397	hypothetical protein VITISV_029950 [Viti	0.962	0.967	0.806	0.0
225428167	397	PREDICTED: uncharacterized protein ycf39	0.964	0.969	0.805	0.0
357467621	391	hypothetical protein MTR_3g118430 [Medic	0.834	0.851	0.918	0.0
297798398	400	hypothetical protein ARALYDRAFT_491124 [	0.969	0.967	0.781	0.0
15236930	395	Rossmann-fold NAD(P)-binding domain-cont	0.979	0.989	0.806	0.0
449444370	389	PREDICTED: uncharacterized protein ycf39	0.964	0.989	0.794	1e-180
326488323	386	predicted protein [Hordeum vulgare subsp	0.954	0.987	0.782	1e-177
242079675	385	hypothetical protein SORBIDRAFT_07g02459	0.954	0.989	0.766	1e-176

>gi|224080772|ref|XP_002306225.1| predicted protein [Populus trichocarpa] gi|222849189|gb|EEE86736.1| predicted protein [Populus trichocarpa]

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/401 (82%), Positives = 349/401 (87%), Gaps = 13/401 (3%)

Query: 6   LPTQLPTRGNLHQPHPHHHMKGS-------LSWCHTLTPLPLLSPSANSLGKVCTQQMVV 58
           LP QL T G LH     HH + +       LSW  TL+P PLLS S +     C  + +V
Sbjct: 5   LPAQLATPGKLH-----HHCQFTITSAFIPLSWRRTLSPEPLLSLSTSFPSGKCNGKQLV 59

Query: 59  KCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP 118
            CSA G T+    AVN+ PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP
Sbjct: 60  TCSAIG-TAEATGAVNLGPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP 118

Query: 119 APADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
           APADFLRDWGA VVNADLSKPETIPAT+VGVHTVIDCATGRPEEPIK VDWEGKVALIQC
Sbjct: 119 APADFLRDWGAIVVNADLSKPETIPATMVGVHTVIDCATGRPEEPIKTVDWEGKVALIQC 178

Query: 179 AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYA 238
           AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQDSGLPHVIIRLCGFMQGLIGQYA
Sbjct: 179 AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQDSGLPHVIIRLCGFMQGLIGQYA 238

Query: 239 VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITL 298
           VPILEEKSVWGTDA TRIAYMDTQDIARLT VALRNEKING+ LTF+GPRAWTTQEVITL
Sbjct: 239 VPILEEKSVWGTDAPTRIAYMDTQDIARLTLVALRNEKINGKLLTFAGPRAWTTQEVITL 298

Query: 299 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFD 358
           CERLAGQDANVT VPVSVLR TRQLTR FEWTNDVADRLAFSEVLTSD VFSVPM+ET+ 
Sbjct: 299 CERLAGQDANVTTVPVSVLRVTRQLTRLFEWTNDVADRLAFSEVLTSDVVFSVPMNETYS 358

Query: 359 LLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           LLGV+ KDI+TLEKYLQDYFTNILKKLKDLKAQSKQ+D Y 
Sbjct: 359 LLGVEQKDIVTLEKYLQDYFTNILKKLKDLKAQSKQSDIYF 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586211|ref|XP_002533763.1| conserved hypothetical protein [Ricinus communis] gi|223526320|gb|EEF28622.1| conserved hypothetical protein [Ricinus communis]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/406 (80%), Positives = 347/406 (85%), Gaps = 9/406 (2%)

Query: 1   MALRSLPTQLPTRGN-LHQ----PHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQ 55
           MALR    QL T G   HQ    P        +LSW   LTP PL+S S      V T  
Sbjct: 1   MALRFSTIQLATPGKRCHQIAIPPSSSSSNSSTLSWHRNLTPHPLISLSTGKCS-VRTTA 59

Query: 56  MVVKCSAGGGTSGTV--QAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL 113
             V C+A     GTV    VN+ PGTPVRPTSILVVG TGTLGRQIVRRALDEGYDVRCL
Sbjct: 60  AGVTCNASAA-EGTVVPGTVNLGPGTPVRPTSILVVGPTGTLGRQIVRRALDEGYDVRCL 118

Query: 114 VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKV 173
           VRPRPAPADFLRDWGATVVNADLSKPETIPATLVG+HT+IDCATGRPEEPIK VDWEGKV
Sbjct: 119 VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTIIDCATGRPEEPIKTVDWEGKV 178

Query: 174 ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGL 233
           ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FL+DSG+ HVIIRLCGFMQGL
Sbjct: 179 ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLKDSGINHVIIRLCGFMQGL 238

Query: 234 IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ 293
           IGQYAVPILEEKSVWGTDA TRIAYMDTQDIARLTF+ALRNE +NG+ LTF+GPRAWTTQ
Sbjct: 239 IGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIALRNENVNGKLLTFAGPRAWTTQ 298

Query: 294 EVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM 353
           EVITLCERLAGQDANVT VPVS+LRFTRQLTRFFEWTNDVADRLAFSEVLTSDT+FS PM
Sbjct: 299 EVITLCERLAGQDANVTTVPVSILRFTRQLTRFFEWTNDVADRLAFSEVLTSDTIFSAPM 358

Query: 354 SETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           +ET+ LLGV+ KDI+TLE+YLQDYFTNILKKLKDLKAQSKQ DFYI
Sbjct: 359 NETYKLLGVEQKDIVTLEQYLQDYFTNILKKLKDLKAQSKQTDFYI 404

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784532|emb|CAN77228.1| hypothetical protein VITISV_029950 [Vitis vinifera]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/403 (80%), Positives = 343/403 (85%), Gaps = 19/403 (4%)

Query: 6   LPTQLPTRGNLHQPHPHHHMK--GSLSWCHTLT-----PLPLLSP--SANSLGKVCTQQM 56
           LPTQL T  +L   H HH      SLSW  TL+     P PL S   S N L K      
Sbjct: 5   LPTQLATARSLDS-HGHHSKPKPSSLSWRTTLSSNGVVPSPLTSSNLSFNGLPKRSVLP- 62

Query: 57  VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
           VV+CS          AVN+ PGTPVR TS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRP
Sbjct: 63  VVRCSGA--------AVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRP 114

Query: 117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
           RPAPADFLRDWGA VVNADL+KPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct: 115 RPAPADFLRDWGAIVVNADLTKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 174

Query: 177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ 236
           QCAKAMGIQKYVF+SIHNCD HPEVPLMEIKYCTE+FLQD GL H+IIRLCGFMQGLIGQ
Sbjct: 175 QCAKAMGIQKYVFFSIHNCDNHPEVPLMEIKYCTEKFLQDIGLXHIIIRLCGFMQGLIGQ 234

Query: 237 YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVI 296
           YAVPILEEKSVWGTDA TRIAYMDTQDIARLTF+ALRNEKING+ LTF GPRAWTTQEVI
Sbjct: 235 YAVPILEEKSVWGTDATTRIAYMDTQDIARLTFIALRNEKINGKLLTFXGPRAWTTQEVI 294

Query: 297 TLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET 356
           TLCERLAGQDANVT VPVSVL+ TRQLTR FEWTNDVADRLAFSEVLTSDTVFS  M+ET
Sbjct: 295 TLCERLAGQDANVTTVPVSVLKLTRQLTRLFEWTNDVADRLAFSEVLTSDTVFSTSMTET 354

Query: 357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           +DLLGVD KDI+TLEKYLQDYFTNILKKLKDLKAQSKQ+DFYI
Sbjct: 355 YDLLGVDPKDIVTLEKYLQDYFTNILKKLKDLKAQSKQSDFYI 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428167|ref|XP_002278811.1| PREDICTED: uncharacterized protein ycf39 [Vitis vinifera] gi|297744530|emb|CBI37792.3| unnamed protein product [Vitis vinifera]

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/402 (80%), Positives = 343/402 (85%), Gaps = 17/402 (4%)

Query: 6   LPTQLPTRGNLHQPHPHHHMK-GSLSWCHTLT-----PLPLLSP--SANSLGKVCTQQMV 57
           LPTQL T  +L     H   K  SLSW  TL+     P PL S   S N L K      V
Sbjct: 5   LPTQLATARSLDSRGHHSKPKPSSLSWRTTLSSNGVVPSPLTSSNLSFNGLPKRSVLP-V 63

Query: 58  VKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR 117
           V+CS          AVN+ PGTPVR TS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRPR
Sbjct: 64  VRCSGA--------AVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRPR 115

Query: 118 PAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQ 177
           PAPADFLRDWGA VVNADL+KPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALIQ
Sbjct: 116 PAPADFLRDWGAIVVNADLTKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQ 175

Query: 178 CAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQY 237
           CAKAMGIQKYVF+SIHNCD HPEVPLMEIKYCTE+FLQD GL H+IIRLCGFMQGLIGQY
Sbjct: 176 CAKAMGIQKYVFFSIHNCDNHPEVPLMEIKYCTEKFLQDIGLTHIIIRLCGFMQGLIGQY 235

Query: 238 AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT 297
           AVPILEEKSVWGTDA TRIAYMDTQDIARLTF+ALRNEKING+ LTF+GPRAWTTQEVIT
Sbjct: 236 AVPILEEKSVWGTDATTRIAYMDTQDIARLTFIALRNEKINGKLLTFAGPRAWTTQEVIT 295

Query: 298 LCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF 357
           LCERLAGQDANVT VPVSVL+ TRQLTR FEWTNDVADRLAFSEVLTSDTVFS  M+ET+
Sbjct: 296 LCERLAGQDANVTTVPVSVLKLTRQLTRLFEWTNDVADRLAFSEVLTSDTVFSTSMTETY 355

Query: 358 DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           DLLGVD KDI+TLEKYLQDYFTNILKKLKDLKAQSKQ+DFYI
Sbjct: 356 DLLGVDPKDIVTLEKYLQDYFTNILKKLKDLKAQSKQSDFYI 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467621|ref|XP_003604095.1| hypothetical protein MTR_3g118430 [Medicago truncatula] gi|355493143|gb|AES74346.1| hypothetical protein MTR_3g118430 [Medicago truncatula]

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/333 (91%), Positives = 320/333 (96%)

Query: 67  SGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 126
           S + +AVN+ PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD
Sbjct: 59  SNSERAVNLGPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 118

Query: 127 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQK 186
           WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK VDWEGKVALIQCAKAMGIQK
Sbjct: 119 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQK 178

Query: 187 YVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKS 246
           YVFYSIHNCDKHPEVPLMEIKYCTE FL+DSGL H++IRLCGFMQGLIGQYAVPILEEKS
Sbjct: 179 YVFYSIHNCDKHPEVPLMEIKYCTENFLRDSGLNHIVIRLCGFMQGLIGQYAVPILEEKS 238

Query: 247 VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQD 306
           VWGTDA TRIAYMDTQDIARLTF+ALRNEKING+ LTF+GPRAWTTQEVITLCERLAGQD
Sbjct: 239 VWGTDAPTRIAYMDTQDIARLTFIALRNEKINGKLLTFAGPRAWTTQEVITLCERLAGQD 298

Query: 307 ANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKD 366
           ANVT VPVSVLR TRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM+ET++LLGVD KD
Sbjct: 299 ANVTTVPVSVLRLTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMAETYNLLGVDTKD 358

Query: 367 IITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           IITLEKYLQDYFTNILKKLKDLKAQSKQ+D + 
Sbjct: 359 IITLEKYLQDYFTNILKKLKDLKAQSKQSDIFF 391

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798398|ref|XP_002867083.1| hypothetical protein ARALYDRAFT_491124 [Arabidopsis lyrata subsp. lyrata] gi|297312919|gb|EFH43342.1| hypothetical protein ARALYDRAFT_491124 [Arabidopsis lyrata subsp. lyrata]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/412 (78%), Positives = 347/412 (84%), Gaps = 25/412 (6%)

Query: 1   MALRSLPTQLPTRGNLHQPHPHHHMK---------GSLSWCHTLTPLPLLSPSANSLGKV 51
           MA   LPTQL TRG L     +H+           G LSW  +LTP   +S   +S    
Sbjct: 1   MAALRLPTQLVTRGTLD----YHNSSPSSATAASSGRLSWRRSLTPENSISLFPSSSSSS 56

Query: 52  CTQQMV----VKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEG 107
             ++ +    V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEG
Sbjct: 57  LNRERLIVVPVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEG 108

Query: 108 YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKV 167
           YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK V
Sbjct: 109 YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTV 168

Query: 168 DWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLC 227
           DWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRLC
Sbjct: 169 DWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRLC 228

Query: 228 GFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP 287
           GFMQGLIGQYAVPILEEKSVWGTDA TRIAYMDTQDIARLT +ALRN+KING+ LTF+GP
Sbjct: 229 GFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTLIALRNDKINGKLLTFAGP 288

Query: 288 RAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDT 347
           RAWTTQEVITLCERLAGQDANVT VPVSVLR TRQLTRFF+WTNDVADRLAFSEVL+SDT
Sbjct: 289 RAWTTQEVITLCERLAGQDANVTTVPVSVLRVTRQLTRFFQWTNDVADRLAFSEVLSSDT 348

Query: 348 VFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           VFSVPM+ET  LLGVD KD++TLEKYLQDYF+NILKKLK LKAQSKQ+D Y 
Sbjct: 349 VFSVPMTETNSLLGVDQKDMVTLEKYLQDYFSNILKKLKGLKAQSKQSDIYF 400

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236930|ref|NP_195251.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|18087583|gb|AAL58922.1|AF462834_1 AT4g35250/F23E12_190 [Arabidopsis thaliana] gi|3080425|emb|CAA18744.1| putative protein [Arabidopsis thaliana] gi|7270477|emb|CAB80242.1| putative protein [Arabidopsis thaliana] gi|22137054|gb|AAM91372.1| At4g35250/F23E12_190 [Arabidopsis thaliana] gi|332661085|gb|AEE86485.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/403 (80%), Positives = 350/403 (86%), Gaps = 12/403 (2%)

Query: 1   MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTP---LPLL-SPSANSLGKVCTQQM 56
           MA   LP QL TRGNL   +      G LSW  +LTP   +PL  S S++SL +  +  +
Sbjct: 1   MASLRLPAQLVTRGNLIHHNSSSSSSGRLSWRRSLTPENTIPLFPSSSSSSLNRERSIVV 60

Query: 57  VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
            V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP
Sbjct: 61  PVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 112

Query: 117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
           RPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct: 113 RPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 172

Query: 177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ 236
           QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRLCGFMQGLIGQ
Sbjct: 173 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRLCGFMQGLIGQ 232

Query: 237 YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVI 296
           YAVPILEEKSVWGTDA TR+AYMDTQDIARLT +ALRNEKING+ LTF+GPRAWTTQEVI
Sbjct: 233 YAVPILEEKSVWGTDAPTRVAYMDTQDIARLTLIALRNEKINGKLLTFAGPRAWTTQEVI 292

Query: 297 TLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET 356
           TLCERLAGQDANVT VPVSVLR TRQLTRFF+WTNDVADRLAFSEVL+SDTVFS PM+ET
Sbjct: 293 TLCERLAGQDANVTTVPVSVLRVTRQLTRFFQWTNDVADRLAFSEVLSSDTVFSAPMTET 352

Query: 357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
             LLGVD KD++TLEKYLQDYF+NILKKLKDLKAQSKQ+D Y 
Sbjct: 353 NSLLGVDQKDMVTLEKYLQDYFSNILKKLKDLKAQSKQSDIYF 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444370|ref|XP_004139948.1| PREDICTED: uncharacterized protein ycf39-like [Cucumis sativus] gi|449475769|ref|XP_004154546.1| PREDICTED: uncharacterized protein ycf39-like [Cucumis sativus]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/403 (79%), Positives = 348/403 (86%), Gaps = 18/403 (4%)

Query: 1   MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQM---- 56
           MALR LPTQL T  NLH        + + S   +  P   L  S  S     + +     
Sbjct: 1   MALR-LPTQLVTPVNLH--------RDAFSSRRSFAPSDTLFSSFPSFTSSSSGRSCWLP 51

Query: 57  VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
           +V+C+A          VN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGY+VRCLVRP
Sbjct: 52  LVRCAAQ-----QTGPVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYEVRCLVRP 106

Query: 117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
           RPAPADFLRDWGA VVNADLSKPETIPATLVG+HT+IDCATGRPEEPIK VDWEGKVALI
Sbjct: 107 RPAPADFLRDWGAIVVNADLSKPETIPATLVGIHTIIDCATGRPEEPIKTVDWEGKVALI 166

Query: 177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ 236
           QCAKAMGIQKY+F+SIHNCDKHPEVPLMEIKYCTE+FL+D+GL H+IIRLCGFMQGLIGQ
Sbjct: 167 QCAKAMGIQKYIFFSIHNCDKHPEVPLMEIKYCTEKFLKDAGLNHIIIRLCGFMQGLIGQ 226

Query: 237 YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVI 296
           YAVPILEEKSVWGTDA TRIAYMDTQDIARLTF+ALRNE +NG+ LTF+GPRAWTTQEVI
Sbjct: 227 YAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIALRNENMNGKLLTFAGPRAWTTQEVI 286

Query: 297 TLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET 356
           TLCERLAGQDANVT VPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM+ET
Sbjct: 287 TLCERLAGQDANVTTVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMTET 346

Query: 357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           ++LLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ+D +I
Sbjct: 347 YNLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQSDIFI 389

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326488323|dbj|BAJ93830.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510869|dbj|BAJ91782.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/395 (78%), Positives = 342/395 (86%), Gaps = 14/395 (3%)

Query: 5   SLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGG 64
           SL   LP+R       P H  +G+LSW  T +  P  + + +S G  C  ++VV C+A  
Sbjct: 6   SLAAALPSRLT----SPGH--RGALSWA-TSSARPHPARAVSSGGPRC--RLVVTCNAQA 56

Query: 65  GTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL 124
                   +++  GTPVRPTS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRPRPAPADFL
Sbjct: 57  AAP-----MSIGQGTPVRPTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPADFL 111

Query: 125 RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGI 184
           RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI+ VDWEGKVALIQCAKAMGI
Sbjct: 112 RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIRTVDWEGKVALIQCAKAMGI 171

Query: 185 QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEE 244
           QKYVFYSIHNCDKHPEVPLMEIKYCTE+F+QD+GL + IIRLCGFMQGLIGQYAVPILEE
Sbjct: 172 QKYVFYSIHNCDKHPEVPLMEIKYCTERFIQDTGLDYTIIRLCGFMQGLIGQYAVPILEE 231

Query: 245 KSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAG 304
           KSVWGTDA TRIAYMDTQD+ARLTFVALRNEK + + LTF+GPRAWTTQEVITLCERLAG
Sbjct: 232 KSVWGTDAPTRIAYMDTQDVARLTFVALRNEKASKKLLTFAGPRAWTTQEVITLCERLAG 291

Query: 305 QDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDA 364
           QDANVT VPV+VLRFTRQLTRFF+WTNDVADRLAFSEVL+SDTVFS PM+ET+ LLGV+A
Sbjct: 292 QDANVTTVPVAVLRFTRQLTRFFQWTNDVADRLAFSEVLSSDTVFSAPMNETYQLLGVEA 351

Query: 365 KDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           KDI+TLEKYLQDYF+NILKKLK LKAQSKQ+D Y 
Sbjct: 352 KDILTLEKYLQDYFSNILKKLKGLKAQSKQSDIYF 386

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242079675|ref|XP_002444606.1| hypothetical protein SORBIDRAFT_07g024590 [Sorghum bicolor] gi|241940956|gb|EES14101.1| hypothetical protein SORBIDRAFT_07g024590 [Sorghum bicolor]

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 305/398 (76%), Positives = 341/398 (85%), Gaps = 17/398 (4%)

Query: 2   ALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCS 61
           +L +LP+QL + G L +       + +LS   + +   LL   A   G  C  ++ V C+
Sbjct: 5   SLAALPSQLASPGRLRR-------RAALS---SASRSNLLLHRATKGGSRC--RLAVTCN 52

Query: 62  AGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA 121
           A       V   +++ GTPVRPTSILVVGATGTLGRQ+VRRALDEGYDVRCLVRPRPAPA
Sbjct: 53  AQA-----VAPTSIAQGTPVRPTSILVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPA 107

Query: 122 DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA 181
           DFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPI+ VDWEGKVALIQCAKA
Sbjct: 108 DFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIRTVDWEGKVALIQCAKA 167

Query: 182 MGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPI 241
           MGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+F+QDSGL ++IIRLCGFMQGLIGQYAVPI
Sbjct: 168 MGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFIQDSGLDYIIIRLCGFMQGLIGQYAVPI 227

Query: 242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCER 301
           LEEKSVWGTDA TRIAYMDTQD+ARLTF+A+RNEK N + +TF+GPRAWTTQEVITLCER
Sbjct: 228 LEEKSVWGTDAPTRIAYMDTQDVARLTFIAMRNEKANRKLMTFAGPRAWTTQEVITLCER 287

Query: 302 LAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLG 361
           LAGQDANVT VPV+VLRFTRQLTRFF+WTNDVADRLAFSEVL+SDTVFS PM+ET+ LLG
Sbjct: 288 LAGQDANVTTVPVAVLRFTRQLTRFFQWTNDVADRLAFSEVLSSDTVFSAPMNETYQLLG 347

Query: 362 VDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
           VD  DI++LEKYLQDYFTNILKKLKDLKAQSKQ D + 
Sbjct: 348 VDGNDILSLEKYLQDYFTNILKKLKDLKAQSKQTDIFF 385

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
TAIR|locus:2122083	395	HCF244 "high chlorophyll fluor	0.977	0.987	0.791	1.1e-165
UNIPROTKB|Q880Y0	289	PSPTO_3020 "Uncharacterized pr	0.498	0.688	0.302	6.8e-12
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.563	0.709	0.248	9.3e-09
UNIPROTKB|Q3Z6W4	302	DET1324 "Putative uncharacteri	0.571	0.754	0.241	1.3e-08
TIGR_CMR|DET_1324	302	DET_1324 "conserved hypothetic	0.571	0.754	0.241	1.3e-08
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.355	0.679	0.269	3e-08
DICTYBASE|DDB_G0286385	301	padA "nmrA-like family protein	0.523	0.694	0.246	8.6e-08
UNIPROTKB|Q48HT9	285	PSPPH_2860 "Uncharacterized pr	0.551	0.771	0.251	9.4e-08
UNIPROTKB|P39315	286	ytfG "NAD(P)H:quinone oxidored	0.616	0.860	0.247	2.1e-07
UNIPROTKB|Q0C053	271	HNE_2194 "Putative uncharacter	0.353	0.520	0.331	3e-07

TAIR|locus:2122083 HCF244 "high chlorophyll fluorescence phenotype 244" [Arabidopsis thaliana (taxid:3702)]

 Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
 Identities = 318/402 (79%), Positives = 341/402 (84%)

Query:     1 MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHXXXXXXXX----XXXANSLGKVCTQQM 56
             MA   LP QL TRGNL   +      G LSW                 ++SL +  +  +
Sbjct:     1 MASLRLPAQLVTRGNLIHHNSSSSSSGRLSWRRSLTPENTIPLFPSSSSSSLNRERSIVV 60

Query:    57 VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
              V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP
Sbjct:    61 PVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 112

Query:   117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
             RPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct:   113 RPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 172

Query:   177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ 236
             QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRLCGFMQGLIGQ
Sbjct:   173 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRLCGFMQGLIGQ 232

Query:   237 YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVI 296
             YAVPILEEKSVWGTDA TR+AYMDTQDIARLT +ALRNEKING+ LTF+GPRAWTTQEVI
Sbjct:   233 YAVPILEEKSVWGTDAPTRVAYMDTQDIARLTLIALRNEKINGKLLTFAGPRAWTTQEVI 292

Query:   297 TLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET 356
             TLCERLAGQDANVT VPVSVLR TRQLTRFF+WTNDVADRLAFSEVL+SDTVFS PM+ET
Sbjct:   293 TLCERLAGQDANVTTVPVSVLRVTRQLTRFFQWTNDVADRLAFSEVLSSDTVFSAPMTET 352

Query:   357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQADFY 398
               LLGVD KD++TLEKYLQDYF+NILKKLKDLKAQSKQ+D Y
Sbjct:   353 NSLLGVDQKDMVTLEKYLQDYFSNILKKLKDLKAQSKQSDIY 394

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0003743 "translation initiation factor activity" evidence=IMP

GO:0010207 "photosystem II assembly" evidence=IMP

UNIPROTKB|Q880Y0 PSPTO_3020 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 66/218 (30%), Positives = 103/218 (47%)

Query:    85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
             SILV GATGT+G  + +     G DV+ +VR +P   DF    G T V ADL+   ++  
Sbjct:     2 SILVTGATGTIGSLVTQGLASAGADVKAMVR-QPGKRDFPA--GVTEVVADLTDVSSMRV 58

Query:   145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              L  V T+       P+E  + +     +AL   A+  GI++ V+ S+ + D    VP  
Sbjct:    59 ALSSVRTLFLLNAVTPDEVTQAL-----IAL-NLAQEAGIERIVYLSVIHADTFTNVPHF 112

Query:   205 EIKYCTEQFLQDSGLPHVIIRLCGFMQG-LIGQYAVPILEEKSVWGTD-ALTRIAYMDTQ 262
               KY  E+ ++   +P  I+R   FMQ  L+ Q  +   +  SV+        ++ +D +
Sbjct:   113 TGKYTVERMIESLDIPATILRPAYFMQNDLMVQQTI---QSYSVYPMPIGSAGVSMIDAR 169

Query:   263 DIARLTFVAL--RNEKINGR---TLTFSGPRAWTTQEV 295
             DIA +    L  R+E  +     TL   GP+A T   V
Sbjct:   170 DIADVAVAELLRRDEASSALDLVTLELVGPQALTGASV 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 9.3e-09, P = 9.3e-09
 Identities = 62/249 (24%), Positives = 112/249 (44%)

Query:    84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-----PAPADFL--RDWGATVVNADL 136
             T +LVVGATG +G++IVR  L EG++   L RP           FL  +  GA +V    
Sbjct:    10 TRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGSF 69

Query:   137 SKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
             S  +++ + +  V  V+   +G      +  +   ++ L++  K  G  K    S    D
Sbjct:    70 SDHQSLVSAVKLVDVVVSAMSG---VHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMD 126

Query:   197 K----HPEVPLMEI---KYCTEQFLQDSGLPHV-IIRLC--GFMQGLIGQYA--VPILEE 244
                  H   P  E    K    Q ++ +G+P+  ++  C   +  G + Q    +P  E+
Sbjct:   127 PPRMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEK 186

Query:   245 KSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCERLA 303
              +++G D   ++ + D  DIA+ T   L + +   +T+    P    TQ E++ + E+L 
Sbjct:   187 VNIYG-DGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLT 245

Query:   304 GQDANVTMV 312
             G++   T +
Sbjct:   246 GKELEKTNI 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

UNIPROTKB|Q3Z6W4 DET1324 "Putative uncharacterized protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 59/244 (24%), Positives = 108/244 (44%)

Query:    86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
             + V G +G +G  ++ R  + G+ +R LV    A A  ++  G   V   ++    +  +
Sbjct:     5 VFVSGGSGFVGGHLLPRLAENGFKIRLLVM-NEAEAKRVKTPGVEFVYGTVNDLPVLMES 63

Query:   146 LVGVHTVIDC-ATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
             +  +  VI   A  R  + I  +KV+ EG   ++  A   G+++++   I      P   
Sbjct:    64 MKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGASADPRFT 123

Query:   203 LMEIKYCTEQFLQDSGLPHVIIRL-------CGFMQGLIGQYA-VPILEEKSVWGTDALT 254
              +  KY  E+ +  SGL + I++         GF+  LI  +   P+L    V G +  T
Sbjct:   124 YLHSKYLAEEAVSKSGLDYSILKPSVMFGQGAGFITALIRSFKPYPLLAP--VAG-NGKT 180

Query:   255 RIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPV 314
             R+  +  +D+       L  EKI+ +++   GPR +T  EV+    +  G       VPV
Sbjct:   181 RLQPIWVEDVVSCLLKMLDGEKIH-QSVQIGGPRIFTYDEVLLAVMQAMGVKKPRLHVPV 239

Query:   315 SVLR 318
              ++R
Sbjct:   240 GLMR 243

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_1324 DET_1324 "conserved hypothetical protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 59/244 (24%), Positives = 108/244 (44%)

Query:    86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
             + V G +G +G  ++ R  + G+ +R LV    A A  ++  G   V   ++    +  +
Sbjct:     5 VFVSGGSGFVGGHLLPRLAENGFKIRLLVM-NEAEAKRVKTPGVEFVYGTVNDLPVLMES 63

Query:   146 LVGVHTVIDC-ATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
             +  +  VI   A  R  + I  +KV+ EG   ++  A   G+++++   I      P   
Sbjct:    64 MKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGASADPRFT 123

Query:   203 LMEIKYCTEQFLQDSGLPHVIIRL-------CGFMQGLIGQYA-VPILEEKSVWGTDALT 254
              +  KY  E+ +  SGL + I++         GF+  LI  +   P+L    V G +  T
Sbjct:   124 YLHSKYLAEEAVSKSGLDYSILKPSVMFGQGAGFITALIRSFKPYPLLAP--VAG-NGKT 180

Query:   255 RIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPV 314
             R+  +  +D+       L  EKI+ +++   GPR +T  EV+    +  G       VPV
Sbjct:   181 RLQPIWVEDVVSCLLKMLDGEKIH-QSVQIGGPRIFTYDEVLLAVMQAMGVKKPRLHVPV 239

Query:   315 SVLR 318
              ++R
Sbjct:   240 GLMR 243

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 144 (55.7 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 41/152 (26%), Positives = 75/152 (49%)

Query:    85 SILVVGATGTLGRQIVRR-ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
             ++LV+GA G +GR +V + A+++G+ VR +VR     ++ L   GA  + ADL K     
Sbjct:     2 NVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSE-LEKLGAKPIIADLKKDFHYA 60

Query:   144 ATLVGVHTVIDCATG--RPEEPIKKVDWEGKVALIQCAKAMGIQKYVF---YSIHNCDKH 198
                +    +    +G   P      +D  G +  I+ AK  G+++++    Y   N +  
Sbjct:    61 YDEIEA-VIFTAGSGGHTPASETINIDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENG 119

Query:   199 PE--VPLMEIKYCTEQFLQDSGLPHVIIRLCG 228
             PE  +  ++ K   ++ L+ SGL + I+R  G
Sbjct:   120 PESLIHYLKAKQAADEELKRSGLDYTIVRPVG 151

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0286385 padA "nmrA-like family protein PadA" [Dictyostelium discoideum (taxid:44689)]

 Score = 148 (57.2 bits), Expect = 8.6e-08, P = 8.6e-08
 Identities = 55/223 (24%), Positives = 98/223 (43%)

Query:    85 SILVVGATGTLGRQIVR--RALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
             SILV G TG +GRQ+V+     ++  ++R   R +           +T    D   P T 
Sbjct:    11 SILVTGGTGVVGRQVVKSLELREKNINIRVGGRDQDKCNQLGFGKNSTFTRFDFMDPTTW 70

Query:   143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
               +L GV  V   A      P K +        I+  K   ++K V  S+ + ++   VP
Sbjct:    71 DKSLEGVDRVFLIALPMDPTPEKSLG-----PFIEKCKERKLKKIVVLSVIDAER---VP 122

Query:   203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
             L++I    EQ +Q SGL  VI+R   F +     +    +++ ++        + ++ T 
Sbjct:   123 LVKI----EQMVQGSGLTFVILRPPFFSENFSEGFMKHDIDQGTIRVPVGEHSVNWISTH 178

Query:   263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ 305
             DI     + L + K +GRT+  +GP+    +E+  +  +  G+
Sbjct:   179 DIGECASIVLMDSKFDGRTIEITGPKPINFKELSEVVSKNVGK 221

GO:0070402 "NADPH binding" evidence=ISS

GO:0051287 "NAD binding" evidence=ISS

GO:0031149 "sorocarp stalk cell differentiation" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q48HT9 PSPPH_2860 "Uncharacterized protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 147 (56.8 bits), Expect = 9.4e-08, P = 9.4e-08
 Identities = 58/231 (25%), Positives = 102/231 (44%)

Query:    86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRDWGATVVNADLSKPETIPA 144
             I+V GATG LGR ++ + L      + +   R P  A+ L   G  V +AD S+P T+ +
Sbjct:     2 IVVTGATGQLGRIVIEQLLTRVPAGQIIAAVRSPEKANDLSAKGIQVRHADYSQPLTLDS 61

Query:   145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
                G   V+  ++    + + +       A++  AK +G++   + S+ + D    + L 
Sbjct:    62 AFAGADKVLLISSSEVGQRLPQ-----HKAVVDAAKRVGVKLLAYTSVLHADASV-LGLA 115

Query:   205 EIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQD 263
                  TE +L+ SGLP+V++R   + +       +P  L   +V G     RI+     D
Sbjct:   116 REHRETEDYLRASGLPYVLLRNGWYTENYTA--GIPGALSHGAVMGCADEGRISSASRLD 173

Query:   264 IARLTFVALRN-EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
              A    V L + E  +GR    +G  ++T  E      + AG+      +P
Sbjct:   174 YAEAAAVLLTSGEDQSGRVYELAGDDSYTLAEFAAELSKQAGKTLPYVNLP 224

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P39315 ytfG "NAD(P)H:quinone oxidoreductase" [Escherichia coli K-12 (taxid:83333)]

 Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 64/259 (24%), Positives = 107/259 (41%)

Query:    86 ILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
             I + GATG LG  ++   +       +  +VR  PA A  L   G TV  AD      + 
Sbjct:     2 IAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALAAQGITVRQADYGDEAALT 60

Query:   144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
             + L GV  ++  ++    E  ++      V  I  AKA G++   + S+ + D  P + L
Sbjct:    61 SALQGVEKLLLISSS---EVGQRAPQHRNV--INAAKAAGVKFIAYTSLLHADTSP-LGL 114

Query:   204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
              +    TE+ L DSG+ + ++R   + +  +   A   LE     G     +IA     D
Sbjct:   115 ADEHIETEKMLADSGIVYTLLRNGWYSENYLAS-APAALEHGVFIGAAGDGKIASATRAD 173

Query:   264 IARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQL 323
              A      +      G+    +G  AWT  ++     + +G+   VT   +S   F   L
Sbjct:   174 YAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ--VTYQNLSEADFAAAL 231

Query:   324 TRFFEWTNDVADRLAFSEV 342
              +     + +AD LA S+V
Sbjct:   232 -KSVGLPDGLADMLADSDV 249

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003955 "NAD(P)H dehydrogenase (quinone) activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

UNIPROTKB|Q0C053 HNE_2194 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 55/166 (33%), Positives = 76/166 (45%)

Query:    85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDWGATVVNADLSKPETIP 143
             ++LV GATG +G +++ R  D G + R L+R    APA      GA  V ADL  PE++P
Sbjct:     2 TVLVTGATGLVGARLLPRLSDAGVNCRALLRSGSKAPA------GAEAVEADLLNPESLP 55

Query:   144 ATLVGVHTVIDCAT---GRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHN----- 194
               + GV  +I  A       E+ I K + EG   LI  A+A     +++  S  N     
Sbjct:    56 KAVAGVSAIIHLAAVFRTADEDLIWKSNLEGTRNLIAAAEAHAPDARFILASTSNVYDAD 115

Query:   195 -----CDKHPEVPLMEI---KYCTEQFLQDSGLPHVIIRLCGFMQG 232
                  C+     P       K   EQ LQ+SGL   I R  GF+ G
Sbjct:   116 TVRPGCEDDAAEPRQAYPASKLAAEQALQESGLTWSIHRF-GFVYG 160

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_IV0572	hypothetical protein (399 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pm.C_LG_II001205	RecName- Full=Photosystem II reaction center psb28 protein; (115 aa)			•	•					0.486
	estExt_Genewise1_v1.C_LG_V3745	SubName- Full=Putative uncharacterized protein; (331 aa)			•	•					0.410
	eugene3.00070178	hypothetical protein (262 aa)			•	•					0.404

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	399
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	1e-151
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	8e-66
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-34
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-31
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	8e-27
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-24
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-21
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	5e-18
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-17
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	6e-17
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	1e-16
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-16
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-13
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-13
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	5e-13
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	9e-13
cd08946	200	cd08946, SDR_e, extended (e) SDRs	7e-12
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-10
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-10
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-10
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-09
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-07
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	2e-07
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-07
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	2e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	6e-07
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-06
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-06
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-06
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	9e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-05
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-05
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	6e-05
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-04
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	1e-04
pfam08659	181	pfam08659, KR, KR domain	2e-04
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	3e-04
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	5e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	6e-04
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	0.001
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.001
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	0.001
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	0.002
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.002
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.003
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.003
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.004
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	0.004

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score =  429 bits (1104), Expect = e-151
 Identities = 154/317 (48%), Positives = 224/317 (70%), Gaps = 5/317 (1%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GATGTLGRQIVR+ALDEGY VRCLVR     A FL++WGA +V  DLS PET+P 
Sbjct: 2   SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK-ASFLKEWGAELVYGDLSLPETLPP 60

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  +ID +T RP +    K++DW+GK+ALI+ AKA  I++++F+SI N +++P +P
Sbjct: 61  SFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           LM++K   EQ L+ SG+P+ I RL GF QGLI QYA+PILE++ +W T+  T I+Y+DTQ
Sbjct: 121 LMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQ 180

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           D A+    +L   +   +T    GP++W + E+I+LCE+L+GQ A ++ VP+ +L+  RQ
Sbjct: 181 DAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQ 240

Query: 323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL 382
           +T FFEWT +++DRLAF E+L +   FS  M+E + +  +D  ++I+LE Y Q+YF  IL
Sbjct: 241 ITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERIL 300

Query: 383 KKLKDL--KAQSKQADF 397
           K+LKD+  +   KQ D 
Sbjct: 301 KRLKDINYEQVQKQKDL 317

Length = 317

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  207 bits (530), Expect = 8e-66
 Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 15/211 (7%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +LVVGATG +GR +VR  LD GY VR LVR  P+ A+ L   GA VV  DL+  E++ A
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-PSQAEKLEAAGAEVVVGDLTDAESLAA 59

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE-- 200
            L G+  VI  A    +     + VD++G + LI  AK  G++++V  S    DK     
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPL 119

Query: 201 ---VPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIA 257
               P ++ K   E +L+ SGL + I+R  G      G   V +  + +           
Sbjct: 120 EALGPYLDAKRKAEDYLRASGLDYTIVRPGGLTDDPAGTGRVVLGGDGTRL-------DG 172

Query: 258 YMDTQDIARLTFVALRNEKINGRTLTFSGPR 288
            +   D+A +   AL      G+T    G  
Sbjct: 173 PISRADVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score =  127 bits (322), Expect = 3e-34
 Identities = 75/254 (29%), Positives = 112/254 (44%), Gaps = 12/254 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIPA 144
           ILV GATG LG  +V   L +   V  LVR P  A A      G  V   D   PET+  
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAAD--GVEVRQGDYDDPETLER 58

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              GV  ++  +    E+ I++         I  AK  G++  V+ S    D+     L 
Sbjct: 59  AFEGVDRLLLISPSDLEDRIQQHK-----NFIDAAKQAGVKHIVYLSASGADEDSPFLLA 113

Query: 205 EIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDI 264
                TE++L+ SG+P+ I+R   FM  L+ ++   ILEE +++G     ++A++D +DI
Sbjct: 114 RDHGATEKYLEASGIPYTILRPGWFMDNLL-EFLPSILEEGTIYGPAGDGKVAFVDRRDI 172

Query: 265 ARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLT 324
           A     AL      G+    +GP A +  E+  +     G+   V  VPVS     R+L 
Sbjct: 173 AEAAAAALTEPGHEGKVYNLTGPEALSYAELAAILSEALGKP--VRYVPVSPDEAARELL 230

Query: 325 RFFEWTNDVADRLA 338
                    A  LA
Sbjct: 231 A-AGLPEGFAALLA 243

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score =  120 bits (302), Expect = 1e-31
 Identities = 76/239 (31%), Positives = 112/239 (46%), Gaps = 20/239 (8%)

Query: 86  ILVVGATGTLGRQIVRRAL-DEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ILV GATG  G  +VR  L D G+ VR L R P    A  L   G  VV  DL  PE++ 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 144 ATLVGVHTV---IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-HP 199
           A L GV+ V    D      E+ I     +GK  ++  AK  G+Q +VF S+ + +K   
Sbjct: 61  AALKGVYGVFLVTDFWEAGGEDEI----AQGK-NVVDAAKRAGVQHFVFSSVPDVEKLTL 115

Query: 200 EVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKS---VWGTDALTRI 256
            VP  + K   E++++ SGLP  I+R   FM+  +   A   +E+ +   V   D  T++
Sbjct: 116 AVPHFDSKAEVEEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLTLVLPLDPDTKL 175

Query: 257 AYMDTQDIARLTFVA---LRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMV 312
             +D  DI     VA       K NG+T+  +G    T +E+     ++ G+      V
Sbjct: 176 PMIDVADIGP--AVAAIFKDPAKFNGKTIELAGDE-LTPEEIAAAFSKVLGKPVTYVQV 231

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  107 bits (269), Expect = 8e-27
 Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 8/278 (2%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG +G  +VR  L  G++VR  VR  P  A  L   G  VV  DL  P+++ A 
Sbjct: 3   ILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAAAALAG-GVEVVLGDLRDPKSLVAG 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA--MGIQKYVFYSIHNCDKHPEVPL 203
             GV  V+   +G  +        +   A+++ A+A   G++  V  S+   D      L
Sbjct: 61  AKGVDGVL-LISGLLDGSDAFRAVQV-TAVVRAAEAAGAGVKHGVSLSVLGADAASPSAL 118

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
              K   E  L+ SG+P+  +R   F  G    +               + R++ +   D
Sbjct: 119 ARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDD 178

Query: 264 IARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQL 323
           +A     AL      GRT   +GP A T  E+ +  +   G+   V ++P ++   T  L
Sbjct: 179 VAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRP--VGLIPEALAALTLAL 236

Query: 324 TRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLG 361
           +        VA  L   ++       +    +  +L+G
Sbjct: 237 SGLGLLPGFVARALVAGDIGELLGDLAADSGKLSELIG 274

Length = 275

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  100 bits (250), Expect = 2e-24
 Identities = 59/237 (24%), Positives = 92/237 (38%), Gaps = 18/237 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIPA 144
           ILV GATG  G  +VR +L  G+ VR LVR P+   A  L+  G  +V  DL   E++  
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----P 199
            L GV  V    TG         + E    L   AK  G++ ++     N         P
Sbjct: 61  ALKGVDVVF-SVTGFWLS----KEIEDGKKLADAAKEAGVKHFIPSEFGNDVDRSNGVEP 115

Query: 200 EVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKS----VWGTDALTR 255
            VP  + K   E++++  G+P+  +    FM   +   A P                  +
Sbjct: 116 AVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGPGNPK 175

Query: 256 IAYM-DTQDIARLTFVALRN-EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVT 310
              + D +DI       L +  K+ G+ +   G    +  E+  L  +  G+    T
Sbjct: 176 AVPLDDEEDIGTYVIKILDDPRKLKGKYIRPPG-NILSGNEIAELWSKKIGKTVKYT 231

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 89.7 bits (223), Expect = 3e-21
 Identities = 47/198 (23%), Positives = 69/198 (34%), Gaps = 29/198 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I V+GATG  GR++V+  L  G+ V  L R            G T V  DL     +   
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAP----GVTPVQKDLFDLADLAEA 56

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI--HNCDKHPEVPL 203
           L GV  V+D    RP+      D +G   L+  A   G+++ V  S      D+     L
Sbjct: 57  LAGVDAVVDAFGARPD------DSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRL 110

Query: 204 MEI---------KYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALT 254
            +          K   E+ L+ SGL   I+R           Y         +       
Sbjct: 111 DDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYE--------IGTEGDPA 162

Query: 255 RIAYMDTQDIARLTFVAL 272
             + +   D+A      L
Sbjct: 163 GESSISRADVAAALLDEL 180

Length = 182

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 82.8 bits (205), Expect = 5e-18
 Identities = 72/257 (28%), Positives = 106/257 (41%), Gaps = 13/257 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG +G ++    L+ G  VR LVR     A  L   GA VV  DL  P  + A 
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVR-SDERAAALAARGAEVVVGDLDDPAVLAAA 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALI--QCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           L GV  V   A   P    +      + A       +  G+++ V  S    D      L
Sbjct: 60  LAGVDAVFFLAPPAPTADAR--PGYVQAAEAFASALREAGVKRVVNLSSVGADPESPSGL 117

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALT-RIAYMDTQ 262
           +   +  EQ L  +GLP V +R   FM+ L+ Q A  I +   +        R+  + T 
Sbjct: 118 IRGHWLMEQVLNWAGLPVVHLRPAWFMENLLSQ-APSIRKAGVLALPFPGDGRLPPIATD 176

Query: 263 DIARLTFVALRNEKING-RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTR 321
           DIAR+    L + + +G R    +GP   T  E+     R+ G+   V  VPV   ++  
Sbjct: 177 DIARVAAKLLLDPEWHGHRVYELTGPEDLTMNEIAAALSRVLGRP--VRYVPVPEEQWEA 234

Query: 322 QLTRFF---EWTNDVAD 335
            L       E    +++
Sbjct: 235 TLLSLGFSPEMAQHLSE 251

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 69/282 (24%), Positives = 107/282 (37%), Gaps = 37/282 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG----ATVVNADLSKPET 141
           + V GATG +GR +V R    G  V    R   A A  L   G       V  DL   E+
Sbjct: 3   VTVFGATGFIGRYVVNRLAKRGSQVIVPYR-CEAYARRLLVMGDLGQVLFVEFDLRDDES 61

Query: 142 IPATLVGVHTVIDCATGRPEEP----IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
           I   L G   VI+   GR  E      + V  EG   L + AK  G+++ +  S    D 
Sbjct: 62  IRKALEGSDVVINLV-GRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISALGADA 120

Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVIIR-----------LCGFMQGLIGQYAVPILEEKS 246
           +     +  K   E+ ++++     I+R           L  F + L     +P      
Sbjct: 121 NSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNRFAKLL---AFLPFP-PLI 176

Query: 247 VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQD 306
             G    T+   +   D+A     AL++ +  G+T    GP+ +T  E++ L  RL G+ 
Sbjct: 177 GGGQ---TKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYTLAELVELLRRLGGRK 233

Query: 307 ANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTV 348
             V  +P+ + R    + R           L     LT D +
Sbjct: 234 RRVLPLPLWLARL---IARVKLL------LLLPEPPLTRDQL 266

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 25/242 (10%)

Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
            I + GATGTLG  IV  AL    G+ V  L RP    ++  +  G  VV  D +  E++
Sbjct: 1   KIAIAGATGTLGGPIVS-ALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESL 59

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV---FYS-IHNCDKH 198
            A L GV  VI  A G      +         LI  A A G+++++   F          
Sbjct: 60  VAALKGVDAVI-SALGGAAIGDQLK-------LIDAAIAAGVKRFIPSEFGVDYDRIGAL 111

Query: 199 PEVPLMEIKYCTEQFLQDS--GLPHVIIRLCG-FMQ-GLIGQYAVPILEEKSV--WGTDA 252
           P + L + K    ++L+    GLP   +   G F+   L   + V  L  ++   +G D 
Sbjct: 112 PLLDLFDEKRDVRRYLRAKNAGLPWTYV-STGMFLDYLLEPLFGVVDLANRTATIYG-DG 169

Query: 253 LTRIAYMDTQDIARLT-FVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTM 311
            T+ A+   +DI R         ++   R + F      T  E+I L ER+ G+    T 
Sbjct: 170 ETKFAFTTLEDIGRAVARALTHPDRTLNRVV-FVAGDVVTQNELIALVERVTGRKFERTY 228

Query: 312 VP 313
           V 
Sbjct: 229 VS 230

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 78.0 bits (192), Expect = 1e-16
 Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 11/232 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           I V GATG  G  ++R  L +G   VR +VR     A  L D G  V   D ++PE +  
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVR-NVEKAATLADQGVEVRQGDYNQPELLQK 59

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              G   +        +  ++    +GK  +   A+  G+ K+++ + +   +   +PL 
Sbjct: 60  AFAGASKLFIITGPHYDNTLEIK--QGK-NVADAARRAGV-KHIYSTGYAFAEESAIPLA 115

Query: 205 EIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV-WGTDALTRIA-YMDTQ 262
            +K   E  ++ +G+P+  +R   + +  + +   P  +  S      A       +   
Sbjct: 116 HVKLAVEYAIRTTGIPYTFLRNGLYTENFVSEGL-PAADTGSGAIVLPAGDGPVPSVTRN 174

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPV 314
           D+       L+ E   G+T+       WT  E+     R+ G+   V   PV
Sbjct: 175 DLGPAAAQLLKEEGHEGKTINLVSNCRWTPDELAAALSRVLGKK--VVHQPV 224

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 75.5 bits (186), Expect = 4e-16
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           IL++GATG +GR + R  L++G++V  LVR               VV  DL   +++   
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVR-NTKRLSKEDQEPVAVVEGDLRDLDSLSDA 59

Query: 146 LVGVHTVIDCATGRPE-EPIKKVDWEGKVALIQCAKAMGIQKYVFYS--------IHNCD 196
           + GV  VI  A    +     +VD EG   +++ AK  G++ ++F S            +
Sbjct: 60  VQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETE 119

Query: 197 KHPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
             P  P + +K  TE  L+++ LP+ I+R
Sbjct: 120 PSPSSPYLAVKAKTEAVLREASLPYTIVR 148

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 65/263 (24%), Positives = 99/263 (37%), Gaps = 44/263 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G  G +G  +V R L  G+DVR L R R    D L   G   V  DL+  + +   
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD-GLDPLLS-GVEFVVLDLTDRDLVDEL 60

Query: 146 LVGVH-TVIDCA---TGRPEEPIKKVDW-----EGKVALIQCAKAMGIQKYVFYSIHNC- 195
             GV   VI  A   +          ++     +G + L++ A+A G++++VF S  +  
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120

Query: 196 -----------DKHPEVPL---MEIKYCTEQFLQD----SGLPHVIIRLCGFM------- 230
                      D  P  PL      K   EQ L+      GLP VI+R            
Sbjct: 121 YGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD 180

Query: 231 --QGLIGQYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG 286
              G++  +   +L+ +   V G D      ++   D+A    +AL N   +G       
Sbjct: 181 LSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP--DGGVFNIGS 238

Query: 287 PRAWTT-QEVITLCERLAGQDAN 308
             A  T +E+        G  A 
Sbjct: 239 GTAEITVRELAEAVAEAVGSKAP 261

Length = 314

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 22/191 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GATG  G  IVR AL  G++V  LVR  PA           VV  D+   E +   
Sbjct: 2   IAIIGATGRTGSAIVREALARGHEVTALVR-DPA-KLPAEHEKLKVVQGDVLDLEDVKEA 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF----YSIHNCDKH--- 198
           L G   VI     R +     +  EG   ++   KA G+++ +      S+ +  K    
Sbjct: 60  LEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKVTLV 119

Query: 199 ---PEVP-----LMEIKYCTEQFLQDSGLPHVIIRLCGFMQ-GLIGQYAVPILEEKSVWG 249
                 P     + E      + L++SGL    +R       G  G Y    L   +  G
Sbjct: 120 LDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGYYRVELLVDAKGG 179

Query: 250 TDALTRIAYMD 260
               +RI+  D
Sbjct: 180 ----SRISRAD 186

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 69.8 bits (171), Expect = 5e-13
 Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 31/319 (9%)

Query: 25  MKGSLSWCHTLTPLPLLSPSA--NSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVR 82
              S  +          SPS    +       +     S G   +    A +     P +
Sbjct: 1   HLSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEP-K 59

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP------RPAPADFLRDW-GATVVNAD 135
             ++LVVGATG +G+ +VR  +  GY+V  + R       +    D  ++  GA VV  D
Sbjct: 60  DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGD 119

Query: 136 LSKPETIPATL----VGVHTVIDCATGRP--EEPIKKVDWEGKVALIQCAKAMGIQKYVF 189
           ++  +++   L      V  V+ C   R    +   K+D++     +   + +G + +V 
Sbjct: 120 VTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVL 179

Query: 190 YSIHNCDKHPEVPLMEIKYCTEQFLQ--DSGLPHVIIRLCGFMQGLIGQYAVPILEEKS- 246
            S   C + P +     K   E  LQ  DS   + I+R   F + L GQ  V I+++   
Sbjct: 180 LSAI-CVQKPLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQ--VEIVKDGGP 236

Query: 247 --VWGTDALTRIAYMDTQDIARLTFVA---LRNEKINGRTLTFSGP-RAWTTQEVITLCE 300
             ++G   L     +   D+A  +F+A   L   KIN + L   GP +A T  E   +  
Sbjct: 237 YVMFGDGKLCACKPISEADLA--SFIADCVLDESKIN-KVLPIGGPGKALTPLEQGEMLF 293

Query: 301 RLAGQDANVTMVPVSVLRF 319
           R+ G++     VP+ ++ F
Sbjct: 294 RILGKEPKFFKVPIQIMDF 312

Length = 390

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 68.1 bits (167), Expect = 9e-13
 Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 24/277 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GATG +G ++V R L EG+ VR LVR     AD       TVV  DL  PE++ A 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 146 LVGVHTVIDCATG-RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
           L G+ T              ++ D        + A+A G+++ ++            P +
Sbjct: 61  LEGIDTAYYLVHSMGSGGDFEEADRRAARNFARAARAAGVKRIIYLGGLIPKGEELSPHL 120

Query: 205 EIKYCTEQFLQDSGLP------HVIIRLCG----FMQGLIGQYAVPILEEKSVWGTDALT 254
             +    + L+  G+P       VII         ++ L+    +P++     W     T
Sbjct: 121 RSRAEVGEILRAGGVPVTELRAAVIIGSGSASFEMVRYLV--ERLPVMITPR-W---VNT 174

Query: 255 RIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPV 314
               +  +D+      AL      G T    GP   + ++++     + G      ++PV
Sbjct: 175 PCQPIAIRDVLEYLVAALDRPATAGETFEIGGPDVLSYKDMMERFAEVRGL--RRWILPV 232

Query: 315 SVLRFTRQLTRFF-EWTNDVADRLA--FSEVLTSDTV 348
            VL  T +L+  +      V + +A    E L  D V
Sbjct: 233 PVL--TPRLSSLWVGLVTPVPNSIARPLIEGLKHDVV 267

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 63.9 bits (156), Expect = 7e-12
 Identities = 51/228 (22%), Positives = 83/228 (36%), Gaps = 56/228 (24%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G  G +G  +VRR L+ G++V  +            D    VV+          A 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVI------------DRLDVVVHL---------AA 39

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----------IHNC 195
           LVGV      +   P+E   + +  G + L++ A+  G++++V+ S          +   
Sbjct: 40  LVGV----PASWDNPDE-DFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEE 94

Query: 196 DKHPEVP--------LMEIKYCTEQFLQDSGLPHVIIRL---CGFMQGLIGQYAVPIL-- 242
           ++ P  P        L         + +  GLP VI+RL    G  Q       V     
Sbjct: 95  EETPPRPLSPYGVSKLAAEHLL-RSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIR 153

Query: 243 -----EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS 285
                +  +V+G    TR  ++   D+ R    AL N    G      
Sbjct: 154 RALEGKPLTVFGGGNQTR-DFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG LG  +VR  L +GY VR LVR   + A  L      VV  DL+   ++ A 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRS-GSDAVLLDGLPVEVVEGDLTDAASLAAA 59

Query: 146 LVGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           + G   V   A          +E + + + EG   ++  A   G+++ V  S
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKE-LYRTNVEGTRNVLDAALEAGVRRVVHTS 110

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 87  LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL 146
           LV GATG +G  +VR  L++G +VR LVRP  +    L      +V  DL  P ++   +
Sbjct: 4   LVTGATGFVGSAVVRLLLEQGEEVRVLVRP-TSDRRNLEGLDVEIVEGDLRDPASLRKAV 62

Query: 147 VGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
            G   +   A         PEE +   + EG   L++ A   G+++ V+ S
Sbjct: 63  AGCRALFHVAADYRLWAPDPEE-MYAANVEGTRNLLRAALEAGVERVVYTS 112

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 52/237 (21%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G TG +G  +VRR L EGY+V  L R R + +  L          DL+ P+ +   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES--LNTGRIRFHEGDLTDPDALERL 58

Query: 146 L--VGVHTVIDCA--------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF------ 189
           L  V    VI  A           P + I + +  G + L++ A+  G++++VF      
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFI-RANVLGTLRLLEAARRAGVKRFVFASSSEV 117

Query: 190 YSIHNCDKHPEVPLMEI------------KYCTEQFLQDS----GLPHVIIRLC------ 227
           Y         + P+ E             K   E+ ++      GL  VI+RL       
Sbjct: 118 Y-----GDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 228 ---GFMQGLIGQYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKING 279
               F+  +I      ILE K   + G D   R  ++   D+AR   +AL +     
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLG-DGTQRRDFLYVDDVARAILLALEHPDGGE 228

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 58/262 (22%), Positives = 96/262 (36%), Gaps = 36/262 (13%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           +  V+GA+G +GR++ R     G+DVR + R     A      G  +V AD     ++ A
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLA---WLPGVEIVAADAMDASSVIA 57

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKV-----ALIQCAKAMGIQKYVFYSIHN----- 194
              G   +  CA      P     WE         ++  A+A G +  +  +++      
Sbjct: 58  AARGADVIYHCAN-----PAYT-RWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGPQA 111

Query: 195 ----CDKHPEVPLME---IKYCTEQFLQDS----GLPHVIIRLCGFM-----QGLIGQYA 238
                +  P  P      I+   E+ L  +     +  +I+R   F         +G   
Sbjct: 112 GSPITEDTPFQPTTRKGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINSWLGAAL 171

Query: 239 VPILEEKSVWGTDAL-TRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT 297
             IL+ K+      L T   +    D+AR            G      G  A TT+E+I 
Sbjct: 172 FAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAITTRELIA 231

Query: 298 LCERLAGQDANVTMVPVSVLRF 319
           +  R AG+   V ++P   LR 
Sbjct: 232 IAARAAGRPPKVRVIPKWTLRL 253

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 16/116 (13%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +LV GA G +GR +V + L  G +VR  VR     A+       +VV A+L   ++   
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVR-NAENAE------PSVVLAELPDIDSFTD 53

Query: 145 TLVGVHTVIDCA---------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
             +GV  V+  A            P    +KV+ E    L + A   G++++VF S
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 11/149 (7%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
            + LV+GATG +G+ ++R  L   Y   V  +VR R       ++    +V       E 
Sbjct: 1   KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVR-RKLTFPEAKEKLVQIVVDFERLDE- 58

Query: 142 IPATLVGVHTVIDCATGRP------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
                     V  C  G        +E  +KVD +  + L + AKA G+Q ++  S    
Sbjct: 59  -YLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFLLVSSLGA 117

Query: 196 DKHPEVPLMEIKYCTEQFLQDSGLPHVII 224
           D       +++K   E+ LQ  G   + I
Sbjct: 118 DPKSSFLYLKVKGEVERDLQKLGFERLTI 146

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 36/175 (20%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP--------APADFLRDWGATVVNADLS 137
           + V G TG LGR +V+R L+ G+ V  LVR             A    D    V+  DL+
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEAD-RVRVLEGDLT 59

Query: 138 KP------ETIPATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           +P               V  VI CA       P E   + + +G   +++ A  + IQ++
Sbjct: 60  QPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRF 119

Query: 188 VFYS-----------IHNCDKHPEVPLM----EIKYCTEQFLQDSG--LPHVIIR 225
            + S           I   + +P         + K   EQ ++ +   +P  + R
Sbjct: 120 HYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPLTVYR 174

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 38/226 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP----APADFLRDWGATVVNADLSKPET 141
           I V GA+G LGR +  R L +G++V  + R RP    + ADF        + AD+     
Sbjct: 3   IAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADF--------IAADIRDATA 54

Query: 142 IPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV 201
           + + + G   V  CA  R       ++ +G   +++     G  + VF            
Sbjct: 55  VESAMTGADVVAHCAWVR--GRNDHINIDGTANVLKAMAETGTGRIVF---------TSS 103

Query: 202 PLMEIKYCTEQFLQDSGLPHVIIRLCGFMQG------LIGQYAVPILEEKSVWGTDALTR 255
                +   EQ L D GL  V +R C  + G      +   +A+P+L        D + +
Sbjct: 104 GH---QPRVEQMLADCGLEWVAVR-CALIFGRNVDNWVQRLFALPVLPAGYA---DRVVQ 156

Query: 256 IAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCER 301
           + + D  D  RL   AL +  I+   +  + P   T + +     R
Sbjct: 157 VVHSD--DAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGR 200

Length = 854

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 71/292 (24%), Positives = 108/292 (36%), Gaps = 54/292 (18%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +L+VG  G +G  +V   L+EG  VR  V  R  P   L   G   +  D      + +
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVR--VFDRSIPPYELPLGGVDYIKGDYENRADLES 58

Query: 145 TLVGVHTVIDCATG---RPEEPIKKVDWEGKV-ALIQCAKAM---GIQKYVF-------Y 190
            LVG+ TVI  A+            +D +  V   +Q  +A    GI K +F       Y
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASSGGTVY 118

Query: 191 SIHNCD----KHPEVPLME---IKYCTEQFL----QDSGLPHVIIRLC---GFMQGLIG- 235
            +          P +P+      K   E++L       GL + ++R+    G  Q   G 
Sbjct: 119 GVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPGQRPDGK 178

Query: 236 QYAVPIL-------EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF---S 285
           Q  +PI        E   +WG     R  Y+   D+       LR++   G    F   S
Sbjct: 179 QGVIPIALNKILRGEPIEIWGDGESIR-DYIYIDDLVEALMALLRSK---GLEEVFNIGS 234

Query: 286 GPRAWTTQEVITLCERLAG-------QDANVTMVPVSVLRFTRQLTRFFEWT 330
           G   ++  E+I   E++ G         A  T VP  VL  +R       W+
Sbjct: 235 G-IGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISR-ARAELGWS 284

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 56/276 (20%), Positives = 90/276 (32%), Gaps = 70/276 (25%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            IL++G T  +G+ +V   L  G+DV    R R    D     G   +  D +  + +  
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGR-TKPDLPE--GVEHIVGDRNDRDALEE 58

Query: 145 TL--VGVHTVID--CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF------YSIHN 194
            L       V+D    T R  E      ++G+V           ++Y+F      Y    
Sbjct: 59  LLGGEDFDVVVDTIAYTPRQVERALDA-FKGRV-----------KQYIFISSASVYLKPG 106

Query: 195 CDKHPEVPLME--------------IKYCTEQFLQDS-GLPHVIIRLCGFMQGLI---GQ 236
                  PL E               K   E  L ++   P+ I+R        I   G 
Sbjct: 107 RVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRP-----PYIYGPGD 161

Query: 237 YA---------------VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT 281
           Y                + +  +    G   +  I     +D+AR    A  N K  G  
Sbjct: 162 YTGRLAYFFDRLARGRPILVPGD----GHSLVQFI---HVKDLARALLGAAGNPKAIGGI 214

Query: 282 LTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVL 317
              +G  A T  E++  C +  G++A +  V    L
Sbjct: 215 FNITGDEAVTWDELLEACAKALGKEAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)

Query: 85  SILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+LV G +G  G ++V++ L+  G  VR   + P        +      +  D++    +
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDV 60

Query: 143 PATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS------- 191
              L G   V   A       P +   +V+  G   ++   +  G+QK+V+ S       
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFG 120

Query: 192 ---IHN-CDKHPEVPLMEIKY 208
              IHN  +  P  PL    Y
Sbjct: 121 GQNIHNGDETLPYPPLDSDMY 141

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           + V GATG +G  +VR  +  G++V  L R   A A  L   GA V   DL   + +   
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLAR-SDAGAAKLEAAGAQVHRGDLEDLDILRKA 61

Query: 146 LVGVHTVIDCA 156
                 VI  A
Sbjct: 62  AAEADAVIHLA 72

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDWGATVVNADLSK--PE 140
            ++ V GATG  G++IV + L +G+ V+  VR    A     +D    +V AD+++   +
Sbjct: 18  KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDK 77

Query: 141 TIPATLVGVHTVIDCATG-RPE-EPIK--KVDWEGKVALIQCAKAMGIQKYVFYS 191
            + A       VI CATG R   +P    KVD  G V L++  +  G+ +++  S
Sbjct: 78  LVEAIGDDSDAVI-CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVS 131

Length = 251

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 87  LVVGATGTLGRQIVRRALDEG--YDVRCL-VRPRPAPADFLRDWG-ATVVNADLSKPETI 142
           LV G  G LGR IVR  L EG   +VR   +R  P   +        T +  D++  + +
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60

Query: 143 PATLVGVHTVI------DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              L G   VI      D       + I KV+ +G   ++      G++  V+ S
Sbjct: 61  RRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 55/282 (19%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +LV G  G +G   VR+ L  G++V  L          L          DL     + A
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTA 61

Query: 145 TLV--GVHTVIDCATGR---PE---EPIKKVDWE--GKVALIQCAKAMGIQKYVFYS--- 191
                 +  V+  A       E    P+K  D    G + LI+     G++K++F S   
Sbjct: 62  VFEENKIDAVVHFA-ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAA 120

Query: 192 ----------IHNCDKHPEVPLMEIKYCTEQFLQD----SGLPHVIIR---LCG-FMQGL 233
                            P  P    K  +E+ L+D    +    VI+R   + G    G 
Sbjct: 121 VYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGT 180

Query: 234 IG--------------QYAVPILEEKSVWGTDALTRIA-----YMDTQDIARLTFVALRN 274
           +G              + A+   ++  ++G D  T+       Y+   D+A    +AL+ 
Sbjct: 181 LGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY 240

Query: 275 EKINGRTLTF---SGPRAWTTQEVITLCERLAGQDANVTMVP 313
            K  G    F   SG   ++  EVI   +++ G+D  V + P
Sbjct: 241 LKEGGSNNIFNLGSG-NGFSVLEVIEAAKKVTGRDIPVEIAP 281

Length = 329

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GA+G  G +I++ AL  G++V  +VR     +      G T++  D+    ++ + 
Sbjct: 3   IAIIGASGKAGSRILKEALKRGHEVTAIVR---NASKLAARQGVTILQKDIFDLTSLASD 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           L G   VI        +  +      + ALI+  K  G+ + 
Sbjct: 60  LAGHDAVISAFGAGASDNDELHSKSIE-ALIEALKGAGVPRL 100

Length = 211

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 18/120 (15%)

Query: 88  VVGATGTLGRQIVRRALDEGYDVRCLVR--PRPAPADFLRDW-GA----TVVNADLSKPE 140
           V GA+G +G  +V+R L  GY VR  VR          L +  GA     +  ADL    
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 141 TIPATLVGVHTV------IDCATGRPEEPIKKVDWEGKVA---LIQCAKAMGIQKYVFYS 191
           +  A + G   V      +D  +  PEE +  ++   K     L  CAKA  +++ VF S
Sbjct: 63  SFDAAIDGCDGVFHVASPVDFDSEDPEEEM--IEPAVKGTLNVLEACAKAKSVKRVVFTS 120

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 26/148 (17%)

Query: 85  SILVVGATGTLGRQIVRRALDEG------YDVRCLVRPRPAPADFLRDWGATVVNADLSK 138
           S LVVG +G LGR +V + L  G      +D+R      P+ +             DL+ 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSG-----RVQFHTGDLTD 55

Query: 139 PETI-PA-TLVGVHTVIDCAT---GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-- 191
           P+ +  A    G + V   A+   G  ++   KV+ +G   +I+  +  G++K V+ S  
Sbjct: 56  PQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYTSSA 115

Query: 192 --------IHNCDKHPEVPLMEIKYCTE 211
                   I N D+    P        E
Sbjct: 116 SVVFNGQDIINGDESLPYPDKHQDAYNE 143

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 20/104 (19%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLV------RPRPAPADFLRDW---GATV--VN 133
           + LV G  G LG ++ R   + G   R LV       P P     L +    GA V  V 
Sbjct: 2   TYLVTGGLGGLGLELARWLAERG--ARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVA 59

Query: 134 ADLSKPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
            D+S  +        I A    +  VI  A    +  +  +  E
Sbjct: 60  CDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAE 103

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 19/103 (18%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLV---RPRPAP-----ADFLRDWGA--TVVNA 134
           ++L+ G TG LG  + R    EG   R LV   R  PAP        L   GA  TV   
Sbjct: 2   TVLITGGTGGLGLALARWLAAEG--ARHLVLVSRRGPAPGAAELVAELEALGAEVTVAAC 59

Query: 135 DLSKPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           D++  +        +PA L  +  V+  A    + P++++  E
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPE 102

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGA-----TVVNADLSK 138
           +LV GA+G +   +V + L+ GY VR  VR   +    + L D  A      +  ADL+ 
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 139 PETIPATLVG------VHTVIDCATGRPEEPIKKVDWEGKVALIQ-CAKAMGIQKYVFYS 191
            ++    + G      V T +  ++  P E IK     G +  ++  A A  ++++V  S
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKP-AIGGTLNALKAAAAAKSVKRFVLTS 119

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 32/139 (23%), Positives = 47/139 (33%), Gaps = 35/139 (25%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVR--CLVR-----------PRPAPADFLRDWGA-- 129
           ++L+ GATG LG  ++R  L      +  CLVR                   L  W    
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 130 ----TVVNADLSKP---------ETIPATLVGVHTVIDCATGR----PEEPIKKVDWEGK 172
                VV  DLSKP         + +      V  +I          P E +K  +  G 
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEE---VDVIIHNGANVNWVYPYEELKPANVLGT 117

Query: 173 VALIQCAKAMGIQKYVFYS 191
             L++ A    ++   F S
Sbjct: 118 KELLKLAATGKLKPLHFVS 136

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 55/241 (22%), Positives = 89/241 (36%), Gaps = 57/241 (23%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGATVVNAD 135
           +LV G  G +G  +V R L+ G++V  L          +        F        +  D
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKF--------IEGD 53

Query: 136 LSKPETIPATLVGVHTVIDCAT--GRP---EEPIKKVDWE--GKVALIQCAKAMGIQKYV 188
           +   E +     GV  V   A     P   E+PIK  +    G + L++ A+  G++++V
Sbjct: 54  IRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFV 113

Query: 189 FYSIHNC-DKHPEVPLME------------IKYCTEQFLQ----DSGLPHVIIRLC---G 228
           + S  +     P +P  E             KY  E + Q      GLP V +R     G
Sbjct: 114 YASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRYFNVYG 173

Query: 229 FMQGLIGQYA--VPILEEK-------SVWGTDALTR-IAYMDTQDIARLTFVALRNEKIN 278
             Q   G YA  +PI  E+       +++G    TR   Y++  D+     +A       
Sbjct: 174 PRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVE--DVVEANLLAATAGAGG 231

Query: 279 G 279
            
Sbjct: 232 E 232

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 87  LVVGATGTLGRQIVRRAL--DEGYDVRCLVRPRPAP--ADFLRDWGA---TVVNADLSKP 139
            V G TG +GR++V R L       V  LVR +           WGA     +  DL++P
Sbjct: 4   FVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEP 63

Query: 140 -----ETIPATLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMG 183
                E   A L  +  V+  A        EE  +  + +G   +++ A+ + 
Sbjct: 64  GLGLSEADIAELGDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ 116

Length = 657

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA 119
           IL+ GATG LGR +VR   + GY+V    R R +
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVIGTGRSRAS 35

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 24/114 (21%), Positives = 36/114 (31%), Gaps = 7/114 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA- 144
           ILV GA G LGR + RR       +      R  P           V  D+  P      
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPP--GSPPKVEYVRLDIRDPAAADVF 58

Query: 145 TLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
                  V+  A      R      +++ +G   ++    A G+ + V  S   
Sbjct: 59  REREADAVVHLAFILDPPRDGAERHRINVDGTQNVLDACAAAGVPRVVVTSSVA 112

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 39/192 (20%), Positives = 64/192 (33%), Gaps = 54/192 (28%)

Query: 88  VVGATGTLGRQIVRRALD--EGYDVRCLVRPRP--APAD-----------FLRDWGA--- 129
           + GATG LG+ ++ + L       + CLVR +   +  +           F R       
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 130 TVVNADLSKP------ETIPATLVG-VHTVIDCA----TGRPEEPIKKVDWEGKVALIQC 178
             V  DLS+P      E     L   V  +I  A       P   ++  +  G   +++ 
Sbjct: 61  IPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRL 119

Query: 179 AKAMGIQKYVFYS--IHNCDKHPEVPLMEI--------------------KYCTEQFLQD 216
           AK M    +   S    N ++   +                         K+  EQ +++
Sbjct: 120 AKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVRE 179

Query: 217 --SGLPHVIIRL 226
              GLP VI R 
Sbjct: 180 AAGGLPVVIYRP 191

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPE---- 140
            LV GA+  +G +I R    +GY V   +R P    A          V  D   PE    
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARA 62

Query: 141 ---TIPATLVGVHTVIDCA-TGRPEEPIKKVDWEGKVALIQ 177
               +      +  ++  A  GRP         EG  A ++
Sbjct: 63  LVDALRDRFGRIDVLVHNAGIGRPTTLR-----EGSDAELE 98

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 61/320 (19%), Positives = 108/320 (33%), Gaps = 72/320 (22%)

Query: 33  HTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVV--- 89
              +    L  S++S          +   A G +    Q    +    V    +L+V   
Sbjct: 7   LRSSSASSLLSSSSSSS----ISPALAARAQG-SRRASQVAGAAAAAAVEKKKVLIVNTN 61

Query: 90  -GATGTLGRQIVRRALDEGYDVRCLVR--------PRPAPADF--LRDWGATVVNADLSK 138
            G    +G  + +  +  G++V    R         +   + F  L   G   V  D   
Sbjct: 62  SGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGD--- 118

Query: 139 PETIPATLVG--VHTVIDCATGRPE---EPIKKVDWEGKVALIQCAKAMGIQKYVFYS-- 191
           P  + + + G     V D   G+     EP+   DW         AK+ G+++++F S  
Sbjct: 119 PADVKSKVAGAGFDVVYD-NNGKDLDEVEPV--ADW---------AKSPGLKQFLFCSSA 166

Query: 192 -IHNCDKHPEVPLMEI--------KYCTEQFLQDSGLPHVIIR---LCG----------F 229
            ++   K  E P +E             E +LQ  G+     R   + G          F
Sbjct: 167 GVYK--KSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWF 224

Query: 230 MQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRA 289
              L+    VPI           LT++ ++  +D+A +  + + N K  G+       RA
Sbjct: 225 FDRLVRGRPVPIPGSG-----IQLTQLGHV--KDLASMFALVVGNPKAAGQIFNIVSDRA 277

Query: 290 WTTQEVITLCERLAGQDANV 309
            T   +   C + AG    +
Sbjct: 278 VTFDGMAKACAKAAGFPEEI 297

Length = 378

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 17/102 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLRDWG---ATVVNADLS 137
            LV GA+  +GR I R    EG  V    R          A  +++ G   A  V AD+S
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVS 67

Query: 138 KP--------ETIPATLVGVHTVIDCA-TGRPEEPIKKVDWE 170
                              +  +++ A    P+ P++++  E
Sbjct: 68  DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEE 109

Length = 251

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDV 110
           I+V+GATGT+G  + +     G++V
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEV 25

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGAT-----VVNADLSK 138
             LV GA   LGR I  R    G DV    R     A+ L     A       V AD++ 
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD 67

Query: 139 PETI 142
              +
Sbjct: 68  KAAL 71

Length = 249

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVV 132
            L+ G    +GR +V R L EG  V  L R        LR  +G  V+
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLER-SAEKLASLRQRFGDHVL 55

Length = 263

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LRDWGATVVNADLS 137
           IL+ G TG +GR + +R    G++V  L R P P         + W     ++   
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPWAGEDADSLEG 56

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 51/168 (30%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI--- 142
           IL+ GA G LGR++V++   EG  V  L R +                 DL+ PE +   
Sbjct: 2   ILITGANGQLGRELVQQLSPEGRVVVALTRSQ----------------LDLTDPEALERL 45

Query: 143 -----PATLV--GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ------KYVF 189
                P  +V    +T +D A   PE+    V+      L + A   G +       YVF
Sbjct: 46  LRAIRPDAVVNTAAYTDVDGAESDPEKAFA-VNALAPQNLARAAARHGARLVHISTDYVF 104

Query: 190 YSIHNCDKHPEVPLME------------IKYCTEQFLQDSGLPHVIIR 225
                 D   + P  E             K   EQ ++ +G   +I+R
Sbjct: 105 ------DGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNALIVR 146

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	399
CHL00194	317	ycf39 Ycf39; Provisional	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PLN02686	367	cinnamoyl-CoA reductase	99.97
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.97
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
PLN02778	298	3,5-epimerase/4-reductase	99.95
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
PRK12320	699	hypothetical protein; Provisional	99.93
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.93
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.92
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.92
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.9
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.88
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.87
PRK06482	276	short chain dehydrogenase; Provisional	99.87
PRK07806	248	short chain dehydrogenase; Provisional	99.87
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.86
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.86
PRK05875	276	short chain dehydrogenase; Provisional	99.86
PRK08263	275	short chain dehydrogenase; Provisional	99.85
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.85
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.84
PRK07074	257	short chain dehydrogenase; Provisional	99.84
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK12828	239	short chain dehydrogenase; Provisional	99.83
PRK09135	249	pteridine reductase; Provisional	99.83
PRK06182	273	short chain dehydrogenase; Validated	99.82
PRK06180	277	short chain dehydrogenase; Provisional	99.82
PRK06914	280	short chain dehydrogenase; Provisional	99.82
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK12829	264	short chain dehydrogenase; Provisional	99.82
PRK07060	245	short chain dehydrogenase; Provisional	99.81
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK07774	250	short chain dehydrogenase; Provisional	99.81
PRK07067	257	sorbitol dehydrogenase; Provisional	99.81
PRK07775	274	short chain dehydrogenase; Provisional	99.81
PRK06138	252	short chain dehydrogenase; Provisional	99.81
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.81
PRK12746	254	short chain dehydrogenase; Provisional	99.8
PRK07825	273	short chain dehydrogenase; Provisional	99.8
PRK12827	249	short chain dehydrogenase; Provisional	99.8
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
COG2910	211	Putative NADH-flavin reductase [General function p	99.8
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
PRK08219	227	short chain dehydrogenase; Provisional	99.8
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.8
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.79
PRK06194	287	hypothetical protein; Provisional	99.79
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.79
PRK05993	277	short chain dehydrogenase; Provisional	99.79
PRK07577	234	short chain dehydrogenase; Provisional	99.79
PRK09186	256	flagellin modification protein A; Provisional	99.78
PRK09291	257	short chain dehydrogenase; Provisional	99.78
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.78
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.78
PLN02253	280	xanthoxin dehydrogenase	99.78
PRK07890	258	short chain dehydrogenase; Provisional	99.78
PRK08628	258	short chain dehydrogenase; Provisional	99.78
PRK06523	260	short chain dehydrogenase; Provisional	99.78
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK06179	270	short chain dehydrogenase; Provisional	99.78
PRK05876	275	short chain dehydrogenase; Provisional	99.78
PRK09134	258	short chain dehydrogenase; Provisional	99.78
PRK12939	250	short chain dehydrogenase; Provisional	99.77
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK06841	255	short chain dehydrogenase; Provisional	99.76
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.76
PRK07856	252	short chain dehydrogenase; Provisional	99.76
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.76
PRK07326	237	short chain dehydrogenase; Provisional	99.76
PRK10538	248	malonic semialdehyde reductase; Provisional	99.75
PRK06057	255	short chain dehydrogenase; Provisional	99.75
PRK06701	290	short chain dehydrogenase; Provisional	99.75
PRK05717	255	oxidoreductase; Validated	99.75
PRK08017	256	oxidoreductase; Provisional	99.75
PRK06128	300	oxidoreductase; Provisional	99.75
PRK06181	263	short chain dehydrogenase; Provisional	99.75
PRK06196	315	oxidoreductase; Provisional	99.75
PRK06123	248	short chain dehydrogenase; Provisional	99.75
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.75
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08265	261	short chain dehydrogenase; Provisional	99.74
PRK07024	257	short chain dehydrogenase; Provisional	99.74
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.74
PRK06398	258	aldose dehydrogenase; Validated	99.74
PRK07814	263	short chain dehydrogenase; Provisional	99.74
PRK08643	256	acetoin reductase; Validated	99.74
PRK08264	238	short chain dehydrogenase; Validated	99.74
PRK07478	254	short chain dehydrogenase; Provisional	99.74
PRK05650	270	short chain dehydrogenase; Provisional	99.74
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.74
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.73
PRK07041	230	short chain dehydrogenase; Provisional	99.73
PRK12744	257	short chain dehydrogenase; Provisional	99.73
KOG2774	366	consensus NAD dependent epimerase [General functio	99.73
PRK12743	256	oxidoreductase; Provisional	99.73
PRK12742	237	oxidoreductase; Provisional	99.73
PRK07063	260	short chain dehydrogenase; Provisional	99.73
PRK05866	293	short chain dehydrogenase; Provisional	99.73
PRK12937	245	short chain dehydrogenase; Provisional	99.72
PRK07904	253	short chain dehydrogenase; Provisional	99.72
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.72
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.72
PRK07035	252	short chain dehydrogenase; Provisional	99.72
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.72
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.72
PRK06500	249	short chain dehydrogenase; Provisional	99.72
PRK08324	681	short chain dehydrogenase; Validated	99.72
PRK08267	260	short chain dehydrogenase; Provisional	99.72
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.72
PRK08251	248	short chain dehydrogenase; Provisional	99.72
PRK06114	254	short chain dehydrogenase; Provisional	99.72
PRK05693	274	short chain dehydrogenase; Provisional	99.72
PRK12747	252	short chain dehydrogenase; Provisional	99.71
PRK06483	236	dihydromonapterin reductase; Provisional	99.71
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.71
PRK07454	241	short chain dehydrogenase; Provisional	99.71
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.71
PRK07109	334	short chain dehydrogenase; Provisional	99.71
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.71
PRK06172	253	short chain dehydrogenase; Provisional	99.71
PRK07102	243	short chain dehydrogenase; Provisional	99.71
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.71
PRK05867	253	short chain dehydrogenase; Provisional	99.71
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK07576	264	short chain dehydrogenase; Provisional	99.7
PRK06101	240	short chain dehydrogenase; Provisional	99.7
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK07023	243	short chain dehydrogenase; Provisional	99.7
PRK08339	263	short chain dehydrogenase; Provisional	99.7
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.7
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK07985	294	oxidoreductase; Provisional	99.7
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.7
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.69
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.69
PRK09242	257	tropinone reductase; Provisional	99.69
PRK06949	258	short chain dehydrogenase; Provisional	99.69
PRK06197	306	short chain dehydrogenase; Provisional	99.69
PRK09072	263	short chain dehydrogenase; Provisional	99.68
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.68
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.68
PRK06198	260	short chain dehydrogenase; Provisional	99.68
PRK07069	251	short chain dehydrogenase; Validated	99.68
PRK08589	272	short chain dehydrogenase; Validated	99.68
PRK08226	263	short chain dehydrogenase; Provisional	99.68
PRK06139	330	short chain dehydrogenase; Provisional	99.68
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.67
PRK08278	273	short chain dehydrogenase; Provisional	99.67
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK05884	223	short chain dehydrogenase; Provisional	99.67
PRK12367	245	short chain dehydrogenase; Provisional	99.67
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.67
PRK05872	296	short chain dehydrogenase; Provisional	99.67
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.66
PRK06924	251	short chain dehydrogenase; Provisional	99.66
PRK07677	252	short chain dehydrogenase; Provisional	99.66
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.66
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.66
PRK07062	265	short chain dehydrogenase; Provisional	99.65
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.65
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.65
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.64
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.64
PRK07832	272	short chain dehydrogenase; Provisional	99.64
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.63
PRK06484	520	short chain dehydrogenase; Validated	99.62
PRK08703	239	short chain dehydrogenase; Provisional	99.62
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.62
PRK06940	275	short chain dehydrogenase; Provisional	99.62
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.62
PRK07578	199	short chain dehydrogenase; Provisional	99.62
PRK06953	222	short chain dehydrogenase; Provisional	99.62
PRK06125	259	short chain dehydrogenase; Provisional	99.62
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.62
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.62
PRK07831	262	short chain dehydrogenase; Provisional	99.61
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.61
PRK07791	286	short chain dehydrogenase; Provisional	99.61
PRK08177	225	short chain dehydrogenase; Provisional	99.6
PRK07201	657	short chain dehydrogenase; Provisional	99.59
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.59
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK05854	313	short chain dehydrogenase; Provisional	99.57
PRK05855	582	short chain dehydrogenase; Validated	99.57
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.56
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.55
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK06484	520	short chain dehydrogenase; Validated	99.54
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.53
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
PLN02780	320	ketoreductase/ oxidoreductase	99.51
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.51
PRK05599	246	hypothetical protein; Provisional	99.49
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.47
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.46
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.46
PRK08303	305	short chain dehydrogenase; Provisional	99.45
PRK08862	227	short chain dehydrogenase; Provisional	99.39
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.38
PLN00015	308	protochlorophyllide reductase	99.37
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.33
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.32
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.31
KOG0725	270	consensus Reductases with broad range of substrate	99.31
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.3
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.3
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.28
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.27
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.27
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.22
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.21
COG1028	251	FabG Dehydrogenases with different specificities (	99.21
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.19
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.16
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.16
KOG1208	314	consensus Dehydrogenases with different specificit	99.15
PRK08309	177	short chain dehydrogenase; Provisional	99.05
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.02
PTZ00325	321	malate dehydrogenase; Provisional	98.99
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.95
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.86
PLN00106	323	malate dehydrogenase	98.83
PRK06720	169	hypothetical protein; Provisional	98.82
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.8
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.75
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.6
PRK09620	229	hypothetical protein; Provisional	98.57
PRK05086	312	malate dehydrogenase; Provisional	98.54
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.5
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.4
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.37
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.36
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.33
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.32
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.19
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.17
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.13
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.11
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.07
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.04
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.04
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.98
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.97
PRK14982	340	acyl-ACP reductase; Provisional	97.97
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.95
COG3268	382	Uncharacterized conserved protein [Function unknow	97.91
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.9
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.86
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.83
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.83
PRK09496	453	trkA potassium transporter peripheral membrane com	97.82
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.78
PRK04148	134	hypothetical protein; Provisional	97.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.72
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.71
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.71
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.7
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.7
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.69
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.66
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.63
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.61
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.61
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.58
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.57
PLN02383	344	aspartate semialdehyde dehydrogenase	97.55
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.49
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.48
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.48
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.46
PRK09496	453	trkA potassium transporter peripheral membrane com	97.45
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.45
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.41
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.41
PRK05442	326	malate dehydrogenase; Provisional	97.39
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.35
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.34
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.31
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.29
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.28
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.27
PRK10669	558	putative cation:proton antiport protein; Provision	97.24
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.22
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.2
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.17
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.14
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	97.13
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.11
PRK08223	287	hypothetical protein; Validated	97.11
PTZ00117	319	malate dehydrogenase; Provisional	97.07
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.04
PRK08655	437	prephenate dehydrogenase; Provisional	97.03
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.03
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.03
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.02
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.98
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.98
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.98
PRK06223	307	malate dehydrogenase; Reviewed	96.98
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.97
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.96
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.95
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.95
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.93
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.93
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.93
PRK08328	231	hypothetical protein; Provisional	96.91
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.91
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.9
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.88
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.85
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.85
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.84
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.83
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.82
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.82
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.82
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.81
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.8
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.8
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.79
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.78
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.77
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.76
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.75
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.75
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.74
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.74
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.73
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.72
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.71
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.71
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.71
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.71
PRK07877	722	hypothetical protein; Provisional	96.7
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.69
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.68
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.68
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.68
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.67
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.67
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.67
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.65
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.64
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.63
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.61
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.6
PLN02602	350	lactate dehydrogenase	96.58
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.58
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.56
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.55
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.55
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.54
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.51
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.51
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.51
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.5
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.49
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.48
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.48
PRK10537	393	voltage-gated potassium channel; Provisional	96.47
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.46
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.45
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.45
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.42
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.42
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.4
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.38
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.37
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.36
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.35
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.32
PLN02928	347	oxidoreductase family protein	96.31
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	96.3
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.27
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	96.26
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.26
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.25
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.25
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.23
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.23
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	96.23
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.22
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.22
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.21
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.21
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.21
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.2
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.2
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.18
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.18
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.18
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.18
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.17
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.17
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.17
PRK08818	370	prephenate dehydrogenase; Provisional	96.17
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.15
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.14
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.09
PLN00203	519	glutamyl-tRNA reductase	96.09
PRK07411	390	hypothetical protein; Validated	96.07
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.07
PRK07574	385	formate dehydrogenase; Provisional	96.06
PRK06849	389	hypothetical protein; Provisional	96.05
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.04
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.04
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.04
PLN02775	286	Probable dihydrodipicolinate reductase	96.04
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.04
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.04
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.03
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.01
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.01
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.01
PLN02712	667	arogenate dehydrogenase	96.01
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.01
PRK07417	279	arogenate dehydrogenase; Reviewed	96.01
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.0
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.99

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.2e-45  Score=348.95  Aligned_cols=305  Identities=49%  Similarity=0.909  Sum_probs=261.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC--CC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR--PE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~--~~  161 (399)
                      |+|+|||||||+|++++++|+++||+|++++|+..+ ...+...+++++++|++|++++.++++++|+|||+++..  ..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~-~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~   79 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK-ASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL   79 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH-hhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence            579999999999999999999999999999998543 233344589999999999999999999999999998733  33


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhh
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPI  241 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~  241 (399)
                      ..+.++|+.++.+++++|+++|++|||++||.+.+..+..+|..+|..+|+++++++++++++||+++|++++..+..++
T Consensus        80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~  159 (317)
T CHL00194         80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPI  159 (317)
T ss_pred             cchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhh
Confidence            45778999999999999999999999999998776667788999999999999999999999999999987665555555


Q ss_pred             ccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHH
Q 015872          242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTR  321 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~  321 (399)
                      +.+.+++..+++.+++|+|++|+|++++.+++++...|++||+++++.+|++|+++.+.+.+|++..+.++|.+..+...
T Consensus       160 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~  239 (317)
T CHL00194        160 LEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLR  239 (317)
T ss_pred             ccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHH
Confidence            55555665556677799999999999999998876678999999999999999999999999999999999999999888


Q ss_pred             HHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHh
Q 015872          322 QLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLK  389 (399)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~  389 (399)
                      .+...+++.......+.+...+..+.....+.+.++++||+.|..+.++++++++++...++++++..
T Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (317)
T CHL00194        240 QITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILKRLKDIN  307 (317)
T ss_pred             HHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            88887777666667776666666666666666788899999997667999999999999999887765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.1e-43  Score=309.57  Aligned_cols=272  Identities=22%  Similarity=0.302  Sum_probs=218.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC----
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT----  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~----  157 (399)
                      |+||||||+||||+|.+.+|++.||+|+++++-.....+.+....+++++||+.|.+.|.++|+  .+|+|||+||    
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            5799999999999999999999999999999865444444433337899999999999999997  6999999998    


Q ss_pred             ---CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh----C
Q 015872          158 ---GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD----S  217 (399)
Q Consensus       158 ---~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~----~  217 (399)
                         ...+..++++|+.||.+|+++|+++|+++|||.||++++.             .|.+||+++|...|++|++    .
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~  160 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN  160 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence               2456778899999999999999999999999999998753             3457999999999999954    7


Q ss_pred             CCCEEEEecCccccc----ccc-------c---chhhhcccc----ccccCCCC-----cceeceeHHHHHHHHHHHHhC
Q 015872          218 GLPHVIIRLCGFMQG----LIG-------Q---YAVPILEEK----SVWGTDAL-----TRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       218 g~~~~ilRp~~~~~~----~~~-------~---~~~~~~~~~----~~~~~~~~-----~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +++++++|..++.|.    .++       .   ++.+..-|+    .+||++-+     ..++||||.|+|++.+.+++.
T Consensus       161 ~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~  240 (329)
T COG1087         161 PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY  240 (329)
T ss_pred             CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHH
Confidence            899999999887631    111       1   122222222    56665433     346999999999999999986


Q ss_pred             CccCC--cEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          275 EKING--RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       275 ~~~~g--~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      =...|  .+||+++|.-+|+.|+++.++++.|++++++..|..              +.|.+             .+.+|
T Consensus       241 L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR--------------~GDpa-------------~l~Ad  293 (329)
T COG1087         241 LKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR--------------AGDPA-------------ILVAD  293 (329)
T ss_pred             HHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCC--------------CCCCc-------------eeEeC
Confidence            22122  599999999999999999999999999988876643              22322             34478


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHH
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~  383 (399)
                      .++++++|||+|+. .+|++.+++.|.|..+
T Consensus       294 ~~kA~~~Lgw~p~~-~~L~~ii~~aw~W~~~  323 (329)
T COG1087         294 SSKARQILGWQPTY-DDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             HHHHHHHhCCCccc-CCHHHHHHHHHHHhhh
Confidence            89999999999982 3999999999999974

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.4e-40  Score=291.04  Aligned_cols=278  Identities=22%  Similarity=0.254  Sum_probs=229.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCC-----CCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPR-----PAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~-----~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      |++|||||.||||+.+++.++++.  .+|++++.-.     +.........+..++++|++|.+.+..+++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            579999999999999999999985  4567777521     222223334589999999999999999998  5999999


Q ss_pred             CCCC-------CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCC---------------CCCCCcHHHHHHHHH
Q 015872          155 CATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD---------------KHPEVPLMEIKYCTE  211 (399)
Q Consensus       155 ~a~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~---------------~~~~~~y~~~K~~~E  211 (399)
                      +|++       ..+..|.++|+.||.+|++++++...+ ||+++||-.++               ..|.+||.+||+..+
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            9983       357788999999999999999999864 99999986542               357899999999999


Q ss_pred             HHHH----hCCCCEEEEecCcccccc------cccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCC
Q 015872          212 QFLQ----DSGLPHVIIRLCGFMQGL------IGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKING  279 (399)
Q Consensus       212 ~~l~----~~g~~~~ilRp~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g  279 (399)
                      .+++    .+|++++|.|+++-||+.      ++..+.+++.|.  +++|+|.+.| +|+||+|-++++..+++++.. |
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iR-DWl~VeDh~~ai~~Vl~kg~~-G  238 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIR-DWLYVEDHCRAIDLVLTKGKI-G  238 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCccee-eeEEeHhHHHHHHHHHhcCcC-C
Confidence            8774    589999999999999753      344556666666  6677775555 999999999999999999876 9


Q ss_pred             cEEEEcCCCCCCHHHHHHHHHHHhCCCCC-----eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccc
Q 015872          280 RTLTFSGPRAWTTQEVITLCERLAGQDAN-----VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMS  354 (399)
Q Consensus       280 ~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ++|||+++...+-.|+++.+++.+|+..+     +.++.                           +.-.-|..|.+|.+
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~---------------------------DRpGHD~RYaid~~  291 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE---------------------------DRPGHDRRYAIDAS  291 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc---------------------------CCCCCccceeechH
Confidence            99999999999999999999999998765     33332                           22335777889999


Q ss_pred             ccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhhhc
Q 015872          355 ETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQS  392 (399)
Q Consensus       355 ~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~~  392 (399)
                      |++++|||.|+  ++||++|+++++||..+..+-+...
T Consensus       292 Ki~~eLgW~P~--~~fe~GlrkTv~WY~~N~~Ww~~l~  327 (340)
T COG1088         292 KIKRELGWRPQ--ETFETGLRKTVDWYLDNEWWWEPLK  327 (340)
T ss_pred             HHhhhcCCCcC--CCHHHHHHHHHHHHHhchHHHhhhh
Confidence            99999999998  8999999999999999876655543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=3e-39  Score=309.15  Aligned_cols=282  Identities=11%  Similarity=0.146  Sum_probs=211.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----------cCCcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----------~~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      .+++|+|||||||||||++|+++|+++|++|++++|........+.          ..+++++.+|++|.+.+.++++++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            4556899999999999999999999999999999986432211110          124788999999999999999999


Q ss_pred             CEEEECCCC-------CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHH
Q 015872          150 HTVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYC  209 (399)
Q Consensus       150 d~Vi~~a~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~  209 (399)
                      |+|||+|+.       ..+..+.++|+.|+.+++++|++.++++|||+||..++.             .|.++|+.+|..
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~  171 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV  171 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence            999999983       123345789999999999999999999999999976542             245689999999


Q ss_pred             HHHHHH----hCCCCEEEEecCccccccc----------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          210 TEQFLQ----DSGLPHVIIRLCGFMQGLI----------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       210 ~E~~l~----~~g~~~~ilRp~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +|.+++    +.+++++++||+++||+..          +.++..+..++.+. .+++.++++|+|++|+|++++.++..
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~  251 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATT  251 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            998764    4689999999999998532          22334455555433 23456666999999999999988765


Q ss_pred             Cc--cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          275 EK--INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      +.  ..+++||+++++.+|++|+++.+.+.++............          +. +.    +      ......+..|
T Consensus       252 ~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~----------~~-~~----~------~~~~~~~~~d  310 (348)
T PRK15181        252 NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPI----------YK-DF----R------DGDVKHSQAD  310 (348)
T ss_pred             ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcc----------cC-CC----C------CCcccccccC
Confidence            32  3568999999999999999999999987432100000000          00 00    0      0011123467


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      .++++++|||.|+  ++++|+|+++++|+..+
T Consensus       311 ~~k~~~~lGw~P~--~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        311 ITKIKTFLSYEPE--FDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             HHHHHHHhCCCCC--CCHHHHHHHHHHHHHHh
Confidence            8899999999999  89999999999999654

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=2e-38  Score=306.73  Aligned_cols=286  Identities=18%  Similarity=0.235  Sum_probs=221.3

Q ss_pred             CCCeEEEE----cCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----------ccccCCcEEEEccCCCCCcHHHHh-
Q 015872           82 RPTSILVV----GATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRDWGATVVNADLSKPETIPATL-  146 (399)
Q Consensus        82 ~~~~vlVt----GatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----------~l~~~~v~~~~~Dl~d~~~l~~~~-  146 (399)
                      ++++||||    |||||||++|++.|+++||+|++++|+......          .+...+++++++|+.|   +.+++ 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            35789999    999999999999999999999999998543211          1223468999999987   44444 


Q ss_pred             -cCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCC----------CcHHHHHHHHHHHHH
Q 015872          147 -VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE----------VPLMEIKYCTEQFLQ  215 (399)
Q Consensus       147 -~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~----------~~y~~~K~~~E~~l~  215 (399)
                       .++|+|||+++.         ++.++.+++++|++.|++||||+||.+++....          .++. +|..+|++++
T Consensus       128 ~~~~d~Vi~~~~~---------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~  197 (378)
T PLN00016        128 GAGFDVVYDNNGK---------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ  197 (378)
T ss_pred             cCCccEEEeCCCC---------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH
Confidence             479999999762         356789999999999999999999988754321          1222 8999999999


Q ss_pred             hCCCCEEEEecCcccccccc-----cchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCC
Q 015872          216 DSGLPHVIIRLCGFMQGLIG-----QYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRA  289 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~  289 (399)
                      +.+++++++||+++||....     .++..+..+.++. ..++...++++|++|+|++++.+++++...+++||+++++.
T Consensus       198 ~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~  277 (378)
T PLN00016        198 KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRA  277 (378)
T ss_pred             HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCc
Confidence            99999999999999975422     1233444554433 23346667999999999999999998766679999999999


Q ss_pred             CCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCcccc
Q 015872          290 WTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIIT  369 (399)
Q Consensus       290 ~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~  369 (399)
                      +|+.|+++.+.+.+|.+.++..+++......          ..  ..+.     .....+..|.++++++|||+|+  ++
T Consensus       278 ~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~----------~~--~~~p-----~~~~~~~~d~~ka~~~LGw~p~--~~  338 (378)
T PLN00016        278 VTFDGMAKACAKAAGFPEEIVHYDPKAVGFG----------AK--KAFP-----FRDQHFFASPRKAKEELGWTPK--FD  338 (378)
T ss_pred             cCHHHHHHHHHHHhCCCCceeecCccccCcc----------cc--cccc-----ccccccccCHHHHHHhcCCCCC--CC
Confidence            9999999999999999877766554321100          00  0000     0122334578999999999999  89


Q ss_pred             HHHHHHHHHHHHHHhhHHHhhhcccccccC
Q 015872          370 LEKYLQDYFTNILKKLKDLKAQSKQADFYI  399 (399)
Q Consensus       370 lee~l~~~~~~~~~~~~~~~~~~~~~~~~~  399 (399)
                      ++|+|++.++|+.+.....|+..+..|++|
T Consensus       339 l~egl~~~~~~~~~~~~~~~~~~~~~~~~~  368 (378)
T PLN00016        339 LVEDLKDRYELYFGRGRDRKEADFETDDKI  368 (378)
T ss_pred             HHHHHHHHHHHHHhcCCCccccCccccHHH
Confidence            999999999999999988899999999875

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.6e-37  Score=304.54  Aligned_cols=276  Identities=13%  Similarity=0.182  Sum_probs=205.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----------------ccc------ccCCcEEEEccCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----------------DFL------RDWGATVVNADLS  137 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----------------~~l------~~~~v~~~~~Dl~  137 (399)
                      ..++|+||||||+||||++|+++|+++|++|++++|......                ..+      ...+++++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            345688999999999999999999999999999875321100                000      1125889999999


Q ss_pred             CCCcHHHHhc--CCCEEEECCCCCC-------C---CcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCCC-------
Q 015872          138 KPETIPATLV--GVHTVIDCATGRP-------E---EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDK-------  197 (399)
Q Consensus       138 d~~~l~~~~~--~~d~Vi~~a~~~~-------~---~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~~-------  197 (399)
                      |.+.+.++++  ++|+|||+|+...       +   ....++|+.|+.+++++|++.+++ +||++||..++.       
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~  203 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIE  203 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCc
Confidence            9999999998  5899999996311       1   123468999999999999999986 999999986542       


Q ss_pred             -------------------CCCCcHHHHHHHHHHHHH----hCCCCEEEEecCcccccccc-------------------
Q 015872          198 -------------------HPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIG-------------------  235 (399)
Q Consensus       198 -------------------~~~~~y~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~-------------------  235 (399)
                                         .|.++|+.+|..+|.+++    ..|++++++||+++||....                   
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~  283 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG  283 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence                               123579999999998773    46999999999999985421                   


Q ss_pred             ----cchhhhccccc--cccCCCCcceeceeHHHHHHHHHHHHhCCccCC--cEEEEcCCCCCCHHHHHHHHHHH---hC
Q 015872          236 ----QYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKING--RTLTFSGPRAWTTQEVITLCERL---AG  304 (399)
Q Consensus       236 ----~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g--~~~~l~~~~~~s~~e~~~~~~~~---~g  304 (399)
                          .++..+..+..  +++.+ ++.++|+||+|+|++++.+++++...|  .+||+++ +.+|+.|+++.+.+.   +|
T Consensus       284 ~~i~~~~~~~~~g~~i~v~g~G-~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g  361 (442)
T PLN02572        284 TALNRFCVQAAVGHPLTVYGKG-GQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLG  361 (442)
T ss_pred             hHHHHHHHHHhcCCCceecCCC-CEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhC
Confidence                12233444553  34444 455699999999999999998753334  5899987 579999999999999   88


Q ss_pred             CCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc---cHHHHHHHHHHHH
Q 015872          305 QDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII---TLEKYLQDYFTNI  381 (399)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~---~lee~l~~~~~~~  381 (399)
                      .+.++...|.+..              +.           ....+..|.+++++ |||+|+  .   +++|+|.+++.||
T Consensus       362 ~~~~~~~~p~~~~--------------~~-----------~~~~~~~d~~k~~~-LGw~p~--~~~~~l~~~l~~~~~~~  413 (442)
T PLN02572        362 LDVEVISVPNPRV--------------EA-----------EEHYYNAKHTKLCE-LGLEPH--LLSDSLLDSLLNFAVKY  413 (442)
T ss_pred             CCCCeeeCCCCcc--------------cc-----------cccccCccHHHHHH-cCCCCC--CcHHHHHHHHHHHHHHH
Confidence            7766655543210              00           01123356778864 999998  5   8999999999999


Q ss_pred             HHhh
Q 015872          382 LKKL  385 (399)
Q Consensus       382 ~~~~  385 (399)
                      +...
T Consensus       414 ~~~~  417 (442)
T PLN02572        414 KDRV  417 (442)
T ss_pred             Hhhc
Confidence            7543

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.7e-37  Score=299.95  Aligned_cols=284  Identities=13%  Similarity=0.187  Sum_probs=209.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCcccc------ccCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFL------RDWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l------~~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      +.++|+|||||||||||++|++.|+++ |++|++++|+..+.....      ...+++++.+|++|.+.+.++++++|+|
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            445678999999999999999999998 599999998744322111      1136899999999999999999999999


Q ss_pred             EECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC---------------------------
Q 015872          153 IDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH---------------------------  198 (399)
Q Consensus       153 i~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~---------------------------  198 (399)
                      ||+|+...       +......|+.++.+++++|++.+ ++|||+||..++..                           
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~  169 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP  169 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence            99998321       12334589999999999999887 89999999754321                           


Q ss_pred             --------CCCcHHHHHHHHHHHHHh----CCCCEEEEecCcccccccc-------------c----chhhhccccccc-
Q 015872          199 --------PEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLIG-------------Q----YAVPILEEKSVW-  248 (399)
Q Consensus       199 --------~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~-------------~----~~~~~~~~~~~~-  248 (399)
                              +.++|+.+|..+|+++..    .+++++++||+++||....             .    +...+..+.++. 
T Consensus       170 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (386)
T PLN02427        170 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKL  249 (386)
T ss_pred             cccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEE
Confidence                    124699999999998854    6899999999999985421             1    112333444332 


Q ss_pred             cCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEcCC-CCCCHHHHHHHHHHHhCCCCCe-------eecCHHHHHH
Q 015872          249 GTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFSGP-RAWTTQEVITLCERLAGQDANV-------TMVPVSVLRF  319 (399)
Q Consensus       249 ~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~~~-~~~s~~e~~~~~~~~~g~~~~~-------~~~~~~~~~~  319 (399)
                      .+++.+.++|+|++|+|++++.+++++. ..|++||++++ +.+|+.|+++.+.+.+|.....       +.++...   
T Consensus       250 ~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~---  326 (386)
T PLN02427        250 VDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE---  326 (386)
T ss_pred             ECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc---
Confidence            2234556699999999999999998864 45789999997 5899999999999999852110       0111000   


Q ss_pred             HHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          320 TRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                             +   ..        ........+..|.++++++|||+|+  ++++++|+++++|+.+.+-+
T Consensus       327 -------~---~~--------~~~~~~~~~~~d~~k~~~~lGw~p~--~~l~~gl~~~~~~~~~~~~~  374 (386)
T PLN02427        327 -------F---YG--------EGYDDSDKRIPDMTIINKQLGWNPK--TSLWDLLESTLTYQHKTYAE  374 (386)
T ss_pred             -------c---cC--------ccccchhhccCCHHHHHHhcCCCcC--ccHHHHHHHHHHHHHHHHHH
Confidence                   0   00        0000111223577999999999999  89999999999999888755

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=7.6e-37  Score=294.32  Aligned_cols=277  Identities=15%  Similarity=0.155  Sum_probs=214.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC--
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR--  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~--  159 (399)
                      ..|+|||||||||||+++++.|+++||+|++++|........ ....++++.+|++|.+.+.+++.++|+|||+|+..  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~   98 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG   98 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence            458999999999999999999999999999999864322111 11246788999999988888899999999999732  


Q ss_pred             ------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------------CCCCcHHHHHHHHHHHH
Q 015872          160 ------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------------HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       160 ------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------------~~~~~y~~~K~~~E~~l  214 (399)
                            .+......|+.++.+++++|++.++++|||+||..++.                   .|.++|+.+|..+|+++
T Consensus        99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695         99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHH
Confidence                  12334568999999999999999999999999975432                   24457999999999876


Q ss_pred             H----hCCCCEEEEecCccccccc----------ccchhhhccc-c--ccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          215 Q----DSGLPHVIIRLCGFMQGLI----------GQYAVPILEE-K--SVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       215 ~----~~g~~~~ilRp~~~~~~~~----------~~~~~~~~~~-~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      +    +.|++++++||+++||...          ..++..+... .  .+++. +++.++|+|++|++++++.+++++  
T Consensus       179 ~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~-g~~~r~~i~v~D~a~ai~~~~~~~--  255 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGD-GKQTRSFTFIDECVEGVLRLTKSD--  255 (370)
T ss_pred             HHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCC-CCeEEeEEeHHHHHHHHHHHHhcc--
Confidence            3    4799999999999997532          1233333332 2  23444 455669999999999999988764  


Q ss_pred             CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          278 NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       278 ~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      .+++||+++++.+|++|+++.+.+..|.+.++...+...               ..             .....|+++++
T Consensus       256 ~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~---------------~~-------------~~~~~d~sk~~  307 (370)
T PLN02695        256 FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPE---------------GV-------------RGRNSDNTLIK  307 (370)
T ss_pred             CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCC---------------Cc-------------cccccCHHHHH
Confidence            257999999999999999999999999876665544210               00             01125788999


Q ss_pred             cccCCCCCccccHHHHHHHHHHHHHHhhHHHhhhc
Q 015872          358 DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQS  392 (399)
Q Consensus       358 ~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~~  392 (399)
                      ++|||+|+  ++++|+|+++++|+.+...+.+++.
T Consensus       308 ~~lgw~p~--~~l~e~i~~~~~~~~~~~~~~~~~~  340 (370)
T PLN02695        308 EKLGWAPT--MRLKDGLRITYFWIKEQIEKEKAEG  340 (370)
T ss_pred             HhcCCCCC--CCHHHHHHHHHHHHHHHHHhhhccc
Confidence            99999998  7999999999999998887666544

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=7.2e-37  Score=292.92  Aligned_cols=293  Identities=15%  Similarity=0.226  Sum_probs=211.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCC-CCCcHHHHhcCCCEEEECCCC--
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCATG--  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~-d~~~l~~~~~~~d~Vi~~a~~--  158 (399)
                      ||+|||||||||||++|+++|+++ ||+|++++|+..+........+++++.+|++ +.+.+.++++++|+|||+|+.  
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            368999999999999999999987 7999999986443222223346899999998 667788888999999999972  


Q ss_pred             -----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------------CCCCcHHHHHHHHHHH
Q 015872          159 -----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       159 -----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~~y~~~K~~~E~~  213 (399)
                           ..+...+++|+.++.+++++|++.+ ++|||+||..++.                    .|.++|+.+|..+|++
T Consensus        81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence                 2234456789999999999999988 7999999975431                    1223699999999988


Q ss_pred             HH----hCCCCEEEEecCcccccccc--------------cchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          214 LQ----DSGLPHVIIRLCGFMQGLIG--------------QYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       214 l~----~~g~~~~ilRp~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      ++    +.+++++++||+++||....              .++..+..+.++. ..++.++++|+|++|++++++.++++
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~  239 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN  239 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence            85    47899999999999975421              2223334454322 22345666999999999999999987


Q ss_pred             Cc--cCCcEEEEcCC-CCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          275 EK--INGRTLTFSGP-RAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       275 ~~--~~g~~~~l~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +.  ..|++||++++ +.+|++|+++.+.+.+|....+...+.+. ..       ...+......    ........+..
T Consensus       240 ~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~----~~~~~~~~~~~  307 (347)
T PRK11908        240 KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKV-KL-------VETTSGAYYG----KGYQDVQNRVP  307 (347)
T ss_pred             ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccccccccccc-cc-------ccCCchhccC----cCcchhccccC
Confidence            53  35789999997 47999999999999999654331111000 00       0000000000    00001112234


Q ss_pred             cccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          352 PMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      |.++++++|||+|+  ++++|+|+++++|+.+...+.++
T Consensus       308 d~~k~~~~lGw~p~--~~l~~~l~~~~~~~~~~~~~~~~  344 (347)
T PRK11908        308 KIDNTMQELGWAPK--TTMDDALRRIFEAYRGHVAEARA  344 (347)
T ss_pred             ChHHHHHHcCCCCC--CcHHHHHHHHHHHHHHHHHHHHh
Confidence            67889999999999  89999999999999887776554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.4e-36  Score=291.21  Aligned_cols=270  Identities=15%  Similarity=0.219  Sum_probs=206.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      -..|+|||||||||||++|++.|+++|++|++++|........    ....+++++.+|+.+.     .+.++|+|||+|
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA  192 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA  192 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence            3457899999999999999999999999999999853221111    1123578888888664     356899999999


Q ss_pred             CCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------------------CCCcHHHHHHHHH
Q 015872          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------------PEVPLMEIKYCTE  211 (399)
Q Consensus       157 ~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------------------~~~~y~~~K~~~E  211 (399)
                      +..       ++..+.+.|+.++.+++++|++.++ +||++||..++..                  +.++|+.+|..+|
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE  271 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  271 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHH
Confidence            832       2234567999999999999999986 8999999765321                  2356999999999


Q ss_pred             HHHH----hCCCCEEEEecCcccccc--------cccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          212 QFLQ----DSGLPHVIIRLCGFMQGL--------IGQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       212 ~~l~----~~g~~~~ilRp~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      ++++    +.+++++++||+++||..        +..++..+..+..+. .+++++.++|+|++|+++++..+++++.  
T Consensus       272 ~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--  349 (436)
T PLN02166        272 TLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--  349 (436)
T ss_pred             HHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--
Confidence            9874    468999999999999753        223444555555432 2334556699999999999999997643  


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFD  358 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +++||+++++.+|+.|+++.+.+.+|.+.++...+...              .+             ......|++|+++
T Consensus       350 ~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~--------------~~-------------~~~~~~d~~Ka~~  402 (436)
T PLN02166        350 VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTA--------------DD-------------PHKRKPDISKAKE  402 (436)
T ss_pred             CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCC--------------CC-------------ccccccCHHHHHH
Confidence            46999999999999999999999999876665543210              00             0112357899999


Q ss_pred             ccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          359 LLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       359 ~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      +|||+|+  .+++|+|+++++|++..+.+
T Consensus       403 ~LGw~P~--~sl~egl~~~i~~~~~~~~~  429 (436)
T PLN02166        403 LLNWEPK--ISLREGLPLMVSDFRNRILN  429 (436)
T ss_pred             HcCCCCC--CCHHHHHHHHHHHHHHHhcC
Confidence            9999998  79999999999999876644

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.6e-35  Score=289.68  Aligned_cols=267  Identities=15%  Similarity=0.228  Sum_probs=204.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +.|+|||||||||||++|++.|+++|++|++++|......    ..+...+++++.+|+.++     ++.++|+|||+|+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa  192 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC  192 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence            4589999999999999999999999999999987532211    112234678889998664     3568999999998


Q ss_pred             CC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC---------------C---CCcHHHHHHHHHH
Q 015872          158 GR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH---------------P---EVPLMEIKYCTEQ  212 (399)
Q Consensus       158 ~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~---------------~---~~~y~~~K~~~E~  212 (399)
                      ..       ++..+.++|+.++.+++++|++.++ +||++||..++..               |   .++|+.+|..+|+
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            22       2344567999999999999999997 8999999865421               1   3569999999999


Q ss_pred             HHH----hCCCCEEEEecCccccccc--------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCC
Q 015872          213 FLQ----DSGLPHVIIRLCGFMQGLI--------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKING  279 (399)
Q Consensus       213 ~l~----~~g~~~~ilRp~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g  279 (399)
                      ++.    +.+++++++||+++||...        ..++..+..+.++. .+++++.++|+|++|+|++++.+++++.  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            874    4689999999999997541        22334444544332 2234556699999999999999998653  4


Q ss_pred             cEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccc
Q 015872          280 RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDL  359 (399)
Q Consensus       280 ~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      ++||+++++.+|+.|+++.+.+.+|.+.++...|...              .+             ......|.++++++
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~--------------~~-------------~~~~~~d~sKa~~~  402 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTE--------------DD-------------PHKRKPDITKAKEL  402 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCC--------------CC-------------ccccccCHHHHHHH
Confidence            5999999999999999999999999776665543210              00             01112577899999


Q ss_pred             cCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          360 LGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       360 LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      |||+|+  ++++|+|+++++|+++.+
T Consensus       403 LGw~P~--~~l~egl~~~~~~~~~~~  426 (442)
T PLN02206        403 LGWEPK--VSLRQGLPLMVKDFRQRV  426 (442)
T ss_pred             cCCCCC--CCHHHHHHHHHHHHHHhh
Confidence            999998  899999999999997765

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.3e-35  Score=305.73  Aligned_cols=288  Identities=15%  Similarity=0.189  Sum_probs=209.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCc-HHHHhcCCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~-l~~~~~~~d~Vi~~a~~~~  160 (399)
                      +|+|||||||||||++|+++|+++ ||+|++++|........+...+++++.+|++|.+. +.++++++|+|||+|+...
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~  394 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIAT  394 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccC
Confidence            578999999999999999999986 79999999975433222333468999999998765 5778899999999998321


Q ss_pred             -------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------------CCCcHHHHHHHHHHH
Q 015872          161 -------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------------PEVPLMEIKYCTEQF  213 (399)
Q Consensus       161 -------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------------~~~~y~~~K~~~E~~  213 (399)
                             +..++++|+.++.+++++|++.+ ++|||+||..++..                    |.++|+.+|..+|++
T Consensus       395 ~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~  473 (660)
T PRK08125        395 PIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRV  473 (660)
T ss_pred             chhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHH
Confidence                   22456789999999999999998 79999999754321                    224699999999998


Q ss_pred             HH----hCCCCEEEEecCccccccc--------------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          214 LQ----DSGLPHVIIRLCGFMQGLI--------------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       214 l~----~~g~~~~ilRp~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      ++    +.|++++++||+++||...              ..++..+..+.++. .+++.+.++|+|++|+|++++.++++
T Consensus       474 ~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~  553 (660)
T PRK08125        474 IWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN  553 (660)
T ss_pred             HHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence            84    4689999999999997532              12334444454432 23346667999999999999999987


Q ss_pred             Cc--cCCcEEEEcCCC-CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          275 EK--INGRTLTFSGPR-AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~-~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +.  ..|++||+++++ .+|++|+++.+.+.+|.+.....++.......   .....+..         ........+..
T Consensus       554 ~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~~  621 (660)
T PRK08125        554 KDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRV---VESSSYYG---------KGYQDVEHRKP  621 (660)
T ss_pred             cccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccc---cccccccc---------cccccccccCC
Confidence            42  347899999985 69999999999999996432223322110000   00000000         00001112235


Q ss_pred             cccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          352 PMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      |+++++++|||+|+  ++++|+|+++++|+++..
T Consensus       622 d~~ka~~~LGw~P~--~~lee~l~~~i~~~~~~~  653 (660)
T PRK08125        622 SIRNARRLLDWEPK--IDMQETIDETLDFFLRTV  653 (660)
T ss_pred             ChHHHHHHhCCCCC--CcHHHHHHHHHHHHHhcc
Confidence            77899999999998  899999999999997554

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=2.2e-35  Score=283.66  Aligned_cols=289  Identities=17%  Similarity=0.173  Sum_probs=209.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc--ccc----ccCCcEEEEccCCCCCcHHHHhcC--CCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFL----RDWGATVVNADLSKPETIPATLVG--VHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~l----~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~  154 (399)
                      |++|||||||||||+++++.|+++|++|+++.++..+..  ..+    ...+++++++|++|.+++.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            368999999999999999999999988665544322211  111    112577889999999999999984  899999


Q ss_pred             CCCCC-------CCCcchhccHHHHHHHHHHHHHc---------CCcEEEEecccCCCC---------------CCCCcH
Q 015872          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAM---------GIQKYVFYSIHNCDK---------------HPEVPL  203 (399)
Q Consensus       155 ~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~---------~v~~~V~~Ss~~~~~---------------~~~~~y  203 (399)
                      +|+..       ....+.++|+.++.+++++|.+.         ++++||++||..++.               .|.++|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            99832       22446679999999999999873         567999999965432               245679


Q ss_pred             HHHHHHHHHHHH----hCCCCEEEEecCcccccccc------cchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIG------QYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       204 ~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      +.+|..+|.+++    +.+++++++||+.+||....      .++..+..+.++. .++++++++|+|++|+|+++..++
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~  240 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA  240 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHH
Confidence            999999998773    57899999999999975431      2333444444322 233466679999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      +.+. .+++||+++++.+|++|+++.+.+.+|...+..+.+.....      ..+.+..         ........+..|
T Consensus       241 ~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~~~d  304 (355)
T PRK10217        241 TTGK-VGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYR------DLITFVA---------DRPGHDLRYAID  304 (355)
T ss_pred             hcCC-CCCeEEeCCCCcccHHHHHHHHHHHhccccccccccccccc------ccceecC---------CCCCCCcccccC
Confidence            8754 46899999999999999999999999864332221111000      0000000         000112234578


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLK  389 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~  389 (399)
                      +++++++|||+|+  ++++|+|+++++|+..+....+
T Consensus       305 ~~k~~~~lg~~p~--~~l~e~l~~~~~~~~~~~~~~~  339 (355)
T PRK10217        305 ASKIARELGWLPQ--ETFESGMRKTVQWYLANESWWK  339 (355)
T ss_pred             HHHHHHhcCCCCc--CcHHHHHHHHHHHHHhCHHHHh
Confidence            8999999999998  8999999999999988765443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=2.6e-34  Score=273.05  Aligned_cols=292  Identities=21%  Similarity=0.261  Sum_probs=217.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC----
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR----  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~----  159 (399)
                      |+|+||||+||||+++++.|+++|++|++++|+..+. ..+...+++++++|+.|.+++.++++++|+|||+++..    
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            4799999999999999999999999999999975442 23334478999999999999999999999999999732    


Q ss_pred             -CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-----------------CCCcHHHHHHHHHHHHHh----C
Q 015872          160 -PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----------------PEVPLMEIKYCTEQFLQD----S  217 (399)
Q Consensus       160 -~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-----------------~~~~y~~~K~~~E~~l~~----~  217 (399)
                       .+...+++|+.++.++++++++.++++||++||..++..                 ...+|+.+|...|+++++    .
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  159 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK  159 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc
Confidence             234556789999999999999999999999999765431                 024799999999988754    6


Q ss_pred             CCCEEEEecCcccccccc------cchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCC
Q 015872          218 GLPHVIIRLCGFMQGLIG------QYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAW  290 (399)
Q Consensus       218 g~~~~ilRp~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~  290 (399)
                      +++++++||+.+||....      ..+.....+. +.+.   +...+++|++|+|++++.+++++. .++.|+++ ++.+
T Consensus       160 ~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~-~~~~  234 (328)
T TIGR03466       160 GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGR-IGERYILG-GENL  234 (328)
T ss_pred             CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCC-CCceEEec-CCCc
Confidence            899999999999975321      1122222222 2222   233589999999999999998854 57789886 5789


Q ss_pred             CHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccH
Q 015872          291 TTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITL  370 (399)
Q Consensus       291 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~l  370 (399)
                      |++|+++.+.+.+|.+.+...+|.+.....+...+.+.........+...........+..|++++++.|||+|.   ++
T Consensus       235 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~---~~  311 (328)
T TIGR03466       235 TLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR---PA  311 (328)
T ss_pred             CHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc---CH
Confidence            999999999999999888888887766555443332211100000000000000112334678999999999997   99


Q ss_pred             HHHHHHHHHHHHHh
Q 015872          371 EKYLQDYFTNILKK  384 (399)
Q Consensus       371 ee~l~~~~~~~~~~  384 (399)
                      +|+++++++|++++
T Consensus       312 ~~~i~~~~~~~~~~  325 (328)
T TIGR03466       312 REALRDAVEWFRAN  325 (328)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=100.00  E-value=2.5e-34  Score=267.88  Aligned_cols=274  Identities=18%  Similarity=0.234  Sum_probs=211.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh------cC-CCEEEECCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL------VG-VHTVIDCAT  157 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~------~~-~d~Vi~~a~  157 (399)
                      +|+||||||++|++++++|+++|++|++++|+..+..    ..+++.+.+|+.|++++.+++      ++ +|.|+|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999999999999865432    247888899999999999998      67 999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhC-CCCEEEEecCccccccccc
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDS-GLPHVIIRLCGFMQGLIGQ  236 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~-g~~~~ilRp~~~~~~~~~~  236 (399)
                      ....      ......+++++|+++|++|||++|+.+.....     ..+...|+++++. |++++++||+++++++...
T Consensus        77 ~~~~------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-----~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~  145 (285)
T TIGR03649        77 PIPD------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-----PAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEE  145 (285)
T ss_pred             CCCC------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-----chHHHHHHHHHhccCCCEEEEeccHHhhhhccc
Confidence            4321      12456789999999999999999997664322     2455678899885 9999999999999886543


Q ss_pred             chh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHH
Q 015872          237 YAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS  315 (399)
Q Consensus       237 ~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  315 (399)
                      +.. .+.....++...++.+++|++++|+|++++.++.++...+++|++.+++.+|++|+++.+.+++|+++++..++.+
T Consensus       146 ~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~  225 (285)
T TIGR03649       146 FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEE  225 (285)
T ss_pred             ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHH
Confidence            322 2333344444445778899999999999999999876677899999999999999999999999999999999887


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHH
Q 015872          316 VLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFT  379 (399)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~  379 (399)
                      ......   ...+++.+....+.........+.....+..+++.+|.+|+   +|+||+++...
T Consensus       226 ~~~~~l---~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~---~~~~~~~~~~~  283 (285)
T TIGR03649       226 ELAQRL---QSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR---GFRDFAESNKA  283 (285)
T ss_pred             HHHHHH---HHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc---cHHHHHHHhhh
Confidence            553221   11344555555444333222333333345777888999998   89999998864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.2e-34  Score=278.23  Aligned_cols=282  Identities=18%  Similarity=0.236  Sum_probs=213.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cc------ccCCcEEEEccCCCCCcHHHHhc--C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FL------RDWGATVVNADLSKPETIPATLV--G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l------~~~~v~~~~~Dl~d~~~l~~~~~--~  148 (399)
                      +|++++|+|||||||+|.++++.|+++|++|++++|.......   .+      ...+++++.+|++|++++.++++  +
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            4566899999999999999999999999999999875332110   01      11357899999999999988886  6


Q ss_pred             CCEEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHH
Q 015872          149 VHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKY  208 (399)
Q Consensus       149 ~d~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~  208 (399)
                      +|+|||+|+...       .....++|+.++.+++++|++.++++||++||.+++.             .+..+|+.+|.
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  161 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKL  161 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            899999998321       2234678999999999999999999999999976542             13467999999


Q ss_pred             HHHHHHHh-----CCCCEEEEecCccccccc-----------c----cchhhhcccc----cccc-----CCCCcceece
Q 015872          209 CTEQFLQD-----SGLPHVIIRLCGFMQGLI-----------G----QYAVPILEEK----SVWG-----TDALTRIAYM  259 (399)
Q Consensus       209 ~~E~~l~~-----~g~~~~ilRp~~~~~~~~-----------~----~~~~~~~~~~----~~~~-----~~~~~~~~~v  259 (399)
                      .+|++++.     .+++++++|++++|+...           .    .++..+..++    .+++     .++.+.++|+
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  241 (352)
T PLN02240        162 FIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYI  241 (352)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeE
Confidence            99998853     468899999988875311           0    1222232222    2333     2456677999


Q ss_pred             eHHHHHHHHHHHHhC----CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhh
Q 015872          260 DTQDIARLTFVALRN----EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVAD  335 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~----~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (399)
                      |++|+|++++.+++.    +...+++||+++++.+|++|+++.+.+.+|.+.++...+..              +.+.  
T Consensus       242 ~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--------------~~~~--  305 (352)
T PLN02240        242 HVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRR--------------PGDA--  305 (352)
T ss_pred             EHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCC--------------CCCh--
Confidence            999999999998864    23346899999999999999999999999987776654421              0110  


Q ss_pred             hhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          336 RLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                                 ..+..|+++++++|||+|+  .+++|+|+++++|++++...+..
T Consensus       306 -----------~~~~~d~~k~~~~lg~~p~--~~l~~~l~~~~~~~~~~~~~~~~  347 (352)
T PLN02240        306 -----------EEVYASTEKAEKELGWKAK--YGIDEMCRDQWNWASKNPYGYGS  347 (352)
T ss_pred             -----------hhhhcCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHhCccccCC
Confidence                       1122567899999999998  89999999999999988766544

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.3e-35  Score=281.02  Aligned_cols=282  Identities=16%  Similarity=0.171  Sum_probs=202.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccc-------cCCcEEEEccCCCCCcHHHHhcC--CC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLR-------DWGATVVNADLSKPETIPATLVG--VH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~-------~~~v~~~~~Dl~d~~~l~~~~~~--~d  150 (399)
                      |+||||||+||||++|+++|+++|++|++++|+....    ...+.       ..+++++++|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999999975321    11110       23588999999999999999984  69


Q ss_pred             EEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCc---EEEEecccCCCC-------------CCCCcHHHHH
Q 015872          151 TVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNCDK-------------HPEVPLMEIK  207 (399)
Q Consensus       151 ~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~---~~V~~Ss~~~~~-------------~~~~~y~~~K  207 (399)
                      +|||+|+...       +....++|+.|+.+++++|++.+++   +|||+||..++.             .|.++|+.+|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            9999998321       2223367899999999999998864   899999975532             2457899999


Q ss_pred             HHHHHHHH----hCCCCEEEEecCcccccccc-----c----chhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          208 YCTEQFLQ----DSGLPHVIIRLCGFMQGLIG-----Q----YAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       208 ~~~E~~l~----~~g~~~~ilRp~~~~~~~~~-----~----~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+|.+++    +.++++++.|+.++++....     .    ++..+..+.  .++.+++++.++|+|++|+|++++.++
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~  240 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLML  240 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHH
Confidence            99998874    46899999998887754211     1    112233343  223233455669999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeec-------CHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhcc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMV-------PVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTS  345 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (399)
                      +++.  +++|||++++.+|++|+++.+.+.+|.+..+...       +......          ...... ..  ..-..
T Consensus       241 ~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~--~~~~~  305 (343)
T TIGR01472       241 QQDK--PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKV----------HVEIDP-RY--FRPTE  305 (343)
T ss_pred             hcCC--CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCce----------eEEeCc-cc--cCCCc
Confidence            8753  3589999999999999999999999975432110       0000000          000000 00  00001


Q ss_pred             CccccccccccccccCCCCCccccHHHHHHHHHHHHH
Q 015872          346 DTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       346 ~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~  382 (399)
                      ...+..|.++++++|||+|+  ++++|+|++++++++
T Consensus       306 ~~~~~~d~~k~~~~lgw~p~--~~l~egi~~~~~~~~  340 (343)
T TIGR01472       306 VDLLLGDATKAKEKLGWKPE--VSFEKLVKEMVEEDL  340 (343)
T ss_pred             cchhcCCHHHHHHhhCCCCC--CCHHHHHHHHHHHHH
Confidence            11223588999999999999  899999999999886

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.5e-34  Score=275.90  Aligned_cols=268  Identities=18%  Similarity=0.177  Sum_probs=199.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----ccccc--CCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRD--WGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      ++|+||||||+||||++++++|+++||+|++++|+.....    ..+..  .+++++.+|++|.+++.++++++|+|||+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            3578999999999999999999999999999999754321    11111  24788999999999999999999999999


Q ss_pred             CCCC--CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC-CCCC----------------------CCCcHHHHHHHH
Q 015872          156 ATGR--PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN-CDKH----------------------PEVPLMEIKYCT  210 (399)
Q Consensus       156 a~~~--~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~-~~~~----------------------~~~~y~~~K~~~  210 (399)
                      |+..  .+....++|+.++.+++++|++.++++||++||.+ ++..                      +.++|+.+|..+
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a  168 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA  168 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence            9843  33455678999999999999999999999999853 3210                      234699999999


Q ss_pred             HHHHH----hCCCCEEEEecCccccccccc-------chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCC
Q 015872          211 EQFLQ----DSGLPHVIIRLCGFMQGLIGQ-------YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKING  279 (399)
Q Consensus       211 E~~l~----~~g~~~~ilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g  279 (399)
                      |+++.    +.|++++++||+++||.....       .+...+.+.... .+ +..++|||++|+|++++.+++++.. +
T Consensus       169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~-~~~~~~i~V~Dva~a~~~al~~~~~-~  245 (342)
T PLN02214        169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT-YA-NLTQAYVDVRDVALAHVLVYEAPSA-S  245 (342)
T ss_pred             HHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc-CC-CCCcCeeEHHHHHHHHHHHHhCccc-C
Confidence            99874    469999999999999865321       111222333211 12 3345999999999999999998654 4


Q ss_pred             cEEEEcCCCCCCHHHHHHHHHHHhCC-CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccc
Q 015872          280 RTLTFSGPRAWTTQEVITLCERLAGQ-DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFD  358 (399)
Q Consensus       280 ~~~~l~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +.||+++. .++++|+++.+.+.++. +.+....+..              ..             ....+..|+++++ 
T Consensus       246 g~yn~~~~-~~~~~el~~~i~~~~~~~~~~~~~~~~~--------------~~-------------~~~~~~~d~~k~~-  296 (342)
T PLN02214        246 GRYLLAES-ARHRGEVVEILAKLFPEYPLPTKCKDEK--------------NP-------------RAKPYKFTNQKIK-  296 (342)
T ss_pred             CcEEEecC-CCCHHHHHHHHHHHCCCCCCCCCCcccc--------------CC-------------CCCccccCcHHHH-
Confidence            58999874 68999999999999863 1111100000              00             0112235778886 


Q ss_pred             ccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          359 LLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       359 ~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      +|||+|.   +++|+|+++++|+++.
T Consensus       297 ~LG~~p~---~lee~i~~~~~~~~~~  319 (342)
T PLN02214        297 DLGLEFT---STKQSLYDTVKSLQEK  319 (342)
T ss_pred             HcCCccc---CHHHHHHHHHHHHHHc
Confidence            5999986   9999999999999754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.2e-34  Score=277.64  Aligned_cols=278  Identities=15%  Similarity=0.124  Sum_probs=207.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc-cCCcEEEEccCCCCCcHHHHhcC--CCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-DWGATVVNADLSKPETIPATLVG--VHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~-~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a  156 (399)
                      +|+||||||+||||+++++.|+++|++|++++|+.......   +. ...++++.+|++|.+++.+++++  +|+|||+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            57899999999999999999999999999999975543221   11 12477899999999999998874  69999999


Q ss_pred             CCC-------CCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC--------------CCCCcHHHHHHHHHHHH
Q 015872          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       157 ~~~-------~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~l  214 (399)
                      +..       .+....++|+.++.+++++|++.+ +++||++||..++.              .|.++|+.+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            831       223455789999999999999887 78999999964431              34578999999999887


Q ss_pred             Hh-----------CCCCEEEEecCcccccc-------cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          215 QD-----------SGLPHVIIRLCGFMQGL-------IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       215 ~~-----------~g~~~~ilRp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      +.           .+++++++||+++||..       +..++..+..+..+...++++.++|+|++|+|++++.+++.. 
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~  243 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLF  243 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHHh
Confidence            53           28999999999999743       122334444555444444566679999999999999888742 


Q ss_pred             ---ccCCcEEEEcCC--CCCCHHHHHHHHHHHhC-CCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccc
Q 015872          276 ---KINGRTLTFSGP--RAWTTQEVITLCERLAG-QDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVF  349 (399)
Q Consensus       276 ---~~~g~~~~l~~~--~~~s~~e~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (399)
                         ...+++||++++  +.+++.|+++.+.+.++ .++.+..-+...            .+.             .....
T Consensus       244 ~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~------------~~~-------------~~~~~  298 (349)
T TIGR02622       244 TGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLN------------HPH-------------EARLL  298 (349)
T ss_pred             hcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCC------------CCc-------------cccee
Confidence               123579999974  68999999999988765 333332211000            000             01112


Q ss_pred             cccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          350 SVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       350 ~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ..|.++++++|||+|+  ++++++++++++|+++..+.
T Consensus       299 ~~d~~k~~~~lgw~p~--~~l~~gi~~~i~w~~~~~~~  334 (349)
T TIGR02622       299 KLDSSKARTLLGWHPR--WGLEEAVSRTVDWYKAWLRG  334 (349)
T ss_pred             ecCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHHhcC
Confidence            3578999999999999  89999999999999877544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.8e-34  Score=275.42  Aligned_cols=273  Identities=19%  Similarity=0.246  Sum_probs=206.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc------cccCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF------LRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~------l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |+|+||||+||||.++++.|+++|++|++++|........      +...++.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            5799999999999999999999999999998753322211      112346789999999999988886  69999999


Q ss_pred             CCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CCCCcHHHHHHHHHHHH
Q 015872          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       156 a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~l  214 (399)
                      |+...       ...+.++|+.++.+++++|++.++++||++||.+++.              .|..+|+.+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            98322       2345678999999999999999999999999976531              34678999999999988


Q ss_pred             Hh-----CCCCEEEEecCccccccc------------c---cchhhhcccc----cccc-----CCCCcceeceeHHHHH
Q 015872          215 QD-----SGLPHVIIRLCGFMQGLI------------G---QYAVPILEEK----SVWG-----TDALTRIAYMDTQDIA  265 (399)
Q Consensus       215 ~~-----~g~~~~ilRp~~~~~~~~------------~---~~~~~~~~~~----~~~~-----~~~~~~~~~v~v~Dva  265 (399)
                      ++     .+++++++|++.+|+...            .   .++..+..+.    .+++     .++.+.++|+|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a  240 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHH
Confidence            53     378999999877775310            0   1122222221    1222     2345667999999999


Q ss_pred             HHHHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 015872          266 RLTFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVL  343 (399)
Q Consensus       266 ~~i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
                      ++++.+++..  ...+++||+++++.+|+.|+++.+.+.+|.+.++...|...              .+..         
T Consensus       241 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~~~~---------  297 (338)
T PRK10675        241 DGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRRE--------------GDLP---------  297 (338)
T ss_pred             HHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCC--------------Cchh---------
Confidence            9999999852  23457999999999999999999999999877665544210              0000         


Q ss_pred             ccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          344 TSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       344 ~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                          ....|+++++++|||+|+  ++++++++++++|+.++.
T Consensus       298 ----~~~~~~~k~~~~lg~~p~--~~~~~~~~~~~~~~~~~~  333 (338)
T PRK10675        298 ----AYWADASKADRELNWRVT--RTLDEMAQDTWHWQSRHP  333 (338)
T ss_pred             ----hhhcCHHHHHHHhCCCCc--CcHHHHHHHHHHHHHhhh
Confidence                112577999999999998  899999999999987653

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=1.7e-33  Score=272.16  Aligned_cols=242  Identities=23%  Similarity=0.363  Sum_probs=197.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc------cc-ccCCcEEEEccCCCCCcHHHHhc----CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FL-RDWGATVVNADLSKPETIPATLV----GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~------~l-~~~~v~~~~~Dl~d~~~l~~~~~----~~  149 (399)
                      .++++|+||||||+||++++++|+++|++|++++|+..+...      .. ...+++++++|++|++++.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            446789999999999999999999999999999997543211      01 12378999999999999999987    59


Q ss_pred             CEEEECCCCC--CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHh--CCCCEEEEe
Q 015872          150 HTVIDCATGR--PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD--SGLPHVIIR  225 (399)
Q Consensus       150 d~Vi~~a~~~--~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~--~g~~~~ilR  225 (399)
                      |+||||++..  .....+++|+.++.+++++|++.|+++||++||..++. +...|..+|...|+.+++  .+++++|+|
T Consensus       138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~-p~~~~~~sK~~~E~~l~~~~~gl~~tIlR  216 (390)
T PLN02657        138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK-PLLEFQRAKLKFEAELQALDSDFTYSIVR  216 (390)
T ss_pred             cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC-cchHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence            9999998742  23455678999999999999999999999999988654 567899999999999976  899999999


Q ss_pred             cCcccccccccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHHHH
Q 015872          226 LCGFMQGLIGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERL  302 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~~~  302 (399)
                      |+++|+++. .++..+..+.++  ++++...+.++||++|+|++++.++.++...+++||++++ +.+|++|+++++.+.
T Consensus       217 p~~~~~~~~-~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~  295 (390)
T PLN02657        217 PTAFFKSLG-GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRI  295 (390)
T ss_pred             cHHHhcccH-HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHH
Confidence            999997643 233444455543  3443333446899999999999999877667899999986 589999999999999


Q ss_pred             hCCCCCeeecCHHHHHHHHHHh
Q 015872          303 AGQDANVTMVPVSVLRFTRQLT  324 (399)
Q Consensus       303 ~g~~~~~~~~~~~~~~~~~~~~  324 (399)
                      +|+++++..+|.+.......+.
T Consensus       296 lG~~~~~~~vp~~~~~~~~~~~  317 (390)
T PLN02657        296 LGKEPKFFKVPIQIMDFAIGVL  317 (390)
T ss_pred             hCCCCceEEcCHHHHHHHHHHH
Confidence            9999999999998877655443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2e-34  Score=251.44  Aligned_cols=272  Identities=18%  Similarity=0.270  Sum_probs=217.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ...++|+||||.||||+||++.|..+||+|++++.--....    .......++.+.-|+..     .++.++|.|+|+|
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhLA   99 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHLA   99 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhhhc
Confidence            34589999999999999999999999999999997433322    22233467777777754     4788999999999


Q ss_pred             CCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC------------------CCcHHHHHHHHH
Q 015872          157 TGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP------------------EVPLMEIKYCTE  211 (399)
Q Consensus       157 ~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~------------------~~~y~~~K~~~E  211 (399)
                      +...       +-.....|+.++.+++-.|++.+ +||++.||..+|..|                  ...|...|+.+|
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE  178 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE  178 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence            8433       33344689999999999999999 699999998876543                  345999999999


Q ss_pred             HHH----HhCCCCEEEEecCccccccc--------ccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          212 QFL----QDSGLPHVIIRLCGFMQGLI--------GQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       212 ~~l----~~~g~~~~ilRp~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      .+.    ++.|+++.|.|+.++||+..        ..|..+.+.+.  .+|++|.++| .|.++.|++++++++++++..
T Consensus       179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR-SF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR-SFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE-EEEeHHHHHHHHHHHhcCCCc
Confidence            876    56899999999999997543        33556666666  6788888887 999999999999999998765


Q ss_pred             CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          278 NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       278 ~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      .  -+||++|+.+|+.|+++++.+..|....++..+..              +.+...+.             .|.++++
T Consensus       258 ~--pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~--------------~Ddp~kR~-------------pDit~ak  308 (350)
T KOG1429|consen  258 G--PVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENG--------------PDDPRKRK-------------PDITKAK  308 (350)
T ss_pred             C--CcccCCccceeHHHHHHHHHHHcCCCcceeecCCC--------------CCCccccC-------------ccHHHHH
Confidence            3  49999999999999999999999766666654332              12222222             5789999


Q ss_pred             cccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          358 DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       358 ~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      +.|||.|+  ++|+|+|..++.|+++.+...+.
T Consensus       309 e~LgW~Pk--v~L~egL~~t~~~fr~~i~~~~~  339 (350)
T KOG1429|consen  309 EQLGWEPK--VSLREGLPLTVTYFRERIAREKK  339 (350)
T ss_pred             HHhCCCCC--CcHHHhhHHHHHHHHHHHHHHHh
Confidence            99999999  89999999999999998876554

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=6.4e-34  Score=269.78  Aligned_cols=266  Identities=17%  Similarity=0.253  Sum_probs=197.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc--cccc-----cCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLR-----DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~l~-----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .|+||||||+||||++++++|+++||+|++++|+.....  ..+.     ..+++++++|++|++.+.++++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            478999999999999999999999999999999754321  1111     125789999999999999999999999999


Q ss_pred             CCCC-----CC-CcchhccHHHHHHHHHHHHHc-CCcEEEEecccCC--CCC----------------C------CCcHH
Q 015872          156 ATGR-----PE-EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC--DKH----------------P------EVPLM  204 (399)
Q Consensus       156 a~~~-----~~-~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~--~~~----------------~------~~~y~  204 (399)
                      |+..     .+ ..+.++|+.++.+++++|.+. +++|||++||.++  +..                |      ..+|+
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  163 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV  163 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence            9832     12 246678999999999999988 8999999999642  210                1      14799


Q ss_pred             HHHHHHHHHH----HhCCCCEEEEecCccccccccc-------chhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          205 EIKYCTEQFL----QDSGLPHVIIRLCGFMQGLIGQ-------YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       205 ~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+|..+|+++    ++.+++++++||+++||+....       .+..++.+...++   ++.++|+|++|+|++++.+++
T Consensus       164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFP---NASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCC---CCCcCeEEHHHHHHHHHHHhc
Confidence            9999999876    4579999999999999865321       1222333322222   345699999999999999999


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                      ++... +.||+++ +.+|++|+++.+.+.++.. +   ++...             ...        .  .....+..|.
T Consensus       241 ~~~~~-~~~~~~g-~~~s~~e~~~~i~~~~~~~-~---~~~~~-------------~~~--------~--~~~~~~~~d~  291 (322)
T PLN02662        241 IPSAS-GRYCLVE-RVVHYSEVVKILHELYPTL-Q---LPEKC-------------ADD--------K--PYVPTYQVSK  291 (322)
T ss_pred             CcCcC-CcEEEeC-CCCCHHHHHHHHHHHCCCC-C---CCCCC-------------CCc--------c--ccccccccCh
Confidence            86543 4788875 6799999999999987631 1   11110             000        0  0011234678


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      +++++ |||++.   +++|+|+++++|++++
T Consensus       292 ~k~~~-lg~~~~---~~~~~l~~~~~~~~~~  318 (322)
T PLN02662        292 EKAKS-LGIEFI---PLEVSLKDTVESLKEK  318 (322)
T ss_pred             HHHHH-hCCccc---cHHHHHHHHHHHHHHc
Confidence            89974 999865   8999999999998754

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=8.6e-34  Score=270.71  Aligned_cols=271  Identities=15%  Similarity=0.193  Sum_probs=197.9

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc-----cccc-CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-----FLRD-WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~-----~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      +++++++||||||+||||++|+++|+++|++|++++|+......     .+.. .+++++.+|++|.+++.++++++|+|
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   84 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV   84 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence            35667899999999999999999999999999999987543211     1111 24789999999999999999999999


Q ss_pred             EECCCCCC---C---CcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCC--------------------------CC
Q 015872          153 IDCATGRP---E---EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK--------------------------HP  199 (399)
Q Consensus       153 i~~a~~~~---~---~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~--------------------------~~  199 (399)
                      ||+|+...   .   ..+.++|+.++.++++++.+. ++++||++||..++.                          .|
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            99998321   1   124578999999999999887 589999999976432                          13


Q ss_pred             CCcHHHHHHHHHHHHH----hCCCCEEEEecCcccccccc----cch---hhhccccc--cccCCCC----cceeceeHH
Q 015872          200 EVPLMEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIG----QYA---VPILEEKS--VWGTDAL----TRIAYMDTQ  262 (399)
Q Consensus       200 ~~~y~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~----~~~---~~~~~~~~--~~~~~~~----~~~~~v~v~  262 (399)
                      .++|+.+|..+|.++.    +.+++++++||+++||+...    ..+   ..+..+..  +.+.++.    ..++|+|++
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence            4579999999998764    46899999999999986432    111   12233332  2221111    125999999


Q ss_pred             HHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCC-CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 015872          263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ-DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSE  341 (399)
Q Consensus       263 Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
                      |+|++++.+++.+.. ++.|+ ++++.+|+.|+++.+.+.++. +.+....+.               +           
T Consensus       245 D~a~a~~~~~~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~---------------~-----------  296 (338)
T PLN00198        245 DVCRAHIFLAEKESA-SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFGDF---------------P-----------  296 (338)
T ss_pred             HHHHHHHHHhhCcCc-CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCcccccc---------------C-----------
Confidence            999999999988643 34675 445678999999999988763 221111000               0           


Q ss_pred             hhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHH
Q 015872          342 VLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~  383 (399)
                         ....+..|.+++++ +||+|+  ++++|+|+++++|+++
T Consensus       297 ---~~~~~~~~~~k~~~-~G~~p~--~~l~~gi~~~~~~~~~  332 (338)
T PLN00198        297 ---SKAKLIISSEKLIS-EGFSFE--YGIEEIYDQTVEYFKA  332 (338)
T ss_pred             ---CCCccccChHHHHh-CCceec--CcHHHHHHHHHHHHHH
Confidence               00112256688877 599999  8999999999999874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=7.2e-34  Score=272.77  Aligned_cols=283  Identities=17%  Similarity=0.209  Sum_probs=206.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCC-CCccccc----cCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRP-APADFLR----DWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~-~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |+||||||+||||++++++|+++|++ |++++|... .....+.    ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999976 555554321 1111111    2347789999999999999987  48999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHc---------CCcEEEEecccCCCC----------------------
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAM---------GIQKYVFYSIHNCDK----------------------  197 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~---------~v~~~V~~Ss~~~~~----------------------  197 (399)
                      |+..       .+..+.++|+.|+.+++++|++.         ++++||++||..++.                      
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            9832       24567789999999999999875         467999999964432                      


Q ss_pred             -CCCCcHHHHHHHHHHHHH----hCCCCEEEEecCccccccc------ccchhhhccccc--cccCCCCcceeceeHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLI------GQYAVPILEEKS--VWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dv  264 (399)
                       .|.+.|+.+|..+|.+++    +.|++++++|++.+||...      ..++..+..+..  +++. +++.++|+|++|+
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~v~v~D~  239 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK-GDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCC-CCeEEeeEEHHHH
Confidence             234689999999998774    4689999999999997542      122233444443  3343 4566799999999


Q ss_pred             HHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhc
Q 015872          265 ARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLT  344 (399)
Q Consensus       265 a~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (399)
                      |+++..+++++. .+++||+++++.+|+.|+++.+++.+|...+. ..+...     .+......+             .
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~-~~~~~~-----~~~~~~~~~-------------~  299 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEIVPK-ATSYRE-----QITYVADRP-------------G  299 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhcccccc-ccchhh-----hccccccCC-------------C
Confidence            999999998653 47899999999999999999999999864221 111100     000000000             0


Q ss_pred             cCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHh
Q 015872          345 SDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLK  389 (399)
Q Consensus       345 ~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~  389 (399)
                      ....+..|+++++++|||+|+  ++++|+|+++++|+.++....+
T Consensus       300 ~~~~~~~d~~k~~~~lg~~p~--~~l~~~l~~~~~~~~~~~~~~~  342 (352)
T PRK10084        300 HDRRYAIDASKISRELGWKPQ--ETFESGIRKTVEWYLANTEWVQ  342 (352)
T ss_pred             CCceeeeCHHHHHHHcCCCCc--CCHHHHHHHHHHHHHhCHHHhh
Confidence            122345788999999999998  7999999999999988755443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.1e-34  Score=257.45  Aligned_cols=276  Identities=20%  Similarity=0.231  Sum_probs=216.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc------cccc--cCCcEEEEccCCCCCcHHHHhc--CCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLR--DWGATVVNADLSKPETIPATLV--GVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~------~~l~--~~~v~~~~~Dl~d~~~l~~~~~--~~d~V  152 (399)
                      .++||||||+||||+|.+-+|+++||.|.++++-.....      ..+.  ..++.++++|++|.+.|+++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            468999999999999999999999999999997432221      1122  2479999999999999999997  68999


Q ss_pred             EECCC-------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CCCCcHHHHHHHHH
Q 015872          153 IDCAT-------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTE  211 (399)
Q Consensus       153 i~~a~-------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E  211 (399)
                      +|+|+       ...+..++.+|+.|+.+|++++++++++.+||+||++++.              .|.++|+.+|...|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            99998       2345677889999999999999999999999999987642              36789999999999


Q ss_pred             HHHHh----CCCCEEEEecCcccccc------------ccc---chhhhcccc----ccccC-----CCCcceeceeHHH
Q 015872          212 QFLQD----SGLPHVIIRLCGFMQGL------------IGQ---YAVPILEEK----SVWGT-----DALTRIAYMDTQD  263 (399)
Q Consensus       212 ~~l~~----~g~~~~ilRp~~~~~~~------------~~~---~~~~~~~~~----~~~~~-----~~~~~~~~v~v~D  263 (399)
                      +.+..    .++.+++||..+.++..            .++   .+.++.-++    .+++.     +++...+++|+-|
T Consensus       162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~D  241 (343)
T KOG1371|consen  162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLD  241 (343)
T ss_pred             HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEe
Confidence            98854    56888999998776410            001   111211111    12221     2355559999999


Q ss_pred             HHHHHHHHHhCCcc--CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 015872          264 IARLTFVALRNEKI--NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSE  341 (399)
Q Consensus       264 va~~i~~~l~~~~~--~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
                      +|+..+.++.+...  .-++||++.+...++.+++..+++++|.++++..++..              ..+         
T Consensus       242 la~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R--------------~gd---------  298 (343)
T KOG1371|consen  242 LADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRR--------------NGD---------  298 (343)
T ss_pred             hHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCC--------------CCC---------
Confidence            99999999998543  23599999999999999999999999999888776542              122         


Q ss_pred             hhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          342 VLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                          .....+++++++++|||+|+  .+++|++++.|+|..+++..
T Consensus       299 ----v~~~ya~~~~a~~elgwk~~--~~iee~c~dlw~W~~~np~g  338 (343)
T KOG1371|consen  299 ----VAFVYANPSKAQRELGWKAK--YGLQEMLKDLWRWQKQNPSG  338 (343)
T ss_pred             ----ceeeeeChHHHHHHhCCccc--cCHHHHHHHHHHHHhcCCCc
Confidence                22234678999999999999  89999999999999887654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=6.7e-34  Score=271.66  Aligned_cols=276  Identities=17%  Similarity=0.154  Sum_probs=205.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccc------cCCcEEEEccCCCCCcHHHHhcC--C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLR------DWGATVVNADLSKPETIPATLVG--V  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~------~~~v~~~~~Dl~d~~~l~~~~~~--~  149 (399)
                      ++|+||||||+||||++++++|+++|++|++++|.....    ...+.      ..+++++.+|++|.+++.+++++  +
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999864321    11111      12578999999999999998874  7


Q ss_pred             CEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCc-----EEEEecccCCCCC------------CCCcHHH
Q 015872          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-----KYVFYSIHNCDKH------------PEVPLME  205 (399)
Q Consensus       150 d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~-----~~V~~Ss~~~~~~------------~~~~y~~  205 (399)
                      |+|||+|+..       .+....++|+.++.+++++|++.+++     +||++||..++..            |.++|+.
T Consensus        85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~  164 (340)
T PLN02653         85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAV  164 (340)
T ss_pred             CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHH
Confidence            9999999842       12333478999999999999999875     8999998754432            4568999


Q ss_pred             HHHHHHHHHH----hCCCCEEEEecCcccccccc-----cc----hhhhcccc--ccccCCCCcceeceeHHHHHHHHHH
Q 015872          206 IKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIG-----QY----AVPILEEK--SVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       206 ~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      +|..+|.+++    +.+++++..|+.+.|++...     ..    +..+..+.  .++.+++++.++|+|++|+|++++.
T Consensus       165 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~  244 (340)
T PLN02653        165 AKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWL  244 (340)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHH
Confidence            9999999874    46788888888777754221     11    11222343  2343445666799999999999999


Q ss_pred             HHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCC--CeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcc
Q 015872          271 ALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDA--NVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTV  348 (399)
Q Consensus       271 ~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (399)
                      +++++.  +++||+++++.+|+.|+++.+.+.+|.+.  .+...+...            .+.             ....
T Consensus       245 ~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~------------~~~-------------~~~~  297 (340)
T PLN02653        245 MLQQEK--PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYF------------RPA-------------EVDN  297 (340)
T ss_pred             HHhcCC--CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccC------------Ccc-------------cccc
Confidence            998753  46899999999999999999999999642  111111000            000             0112


Q ss_pred             ccccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          349 FSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       349 ~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      +..|.++++++|||+|+  ++++|+|+++++|+++..+
T Consensus       298 ~~~d~~k~~~~lgw~p~--~~l~~gi~~~~~~~~~~~~  333 (340)
T PLN02653        298 LKGDASKAREVLGWKPK--VGFEQLVKMMVDEDLELAK  333 (340)
T ss_pred             ccCCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhcC
Confidence            23578999999999999  8999999999999876554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1e-33  Score=268.36  Aligned_cols=265  Identities=17%  Similarity=0.240  Sum_probs=196.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--cc-c----cCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FL-R----DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--~l-~----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .++||||||+||||++++++|+++||+|++++|+..+...  .+ .    ..+++++.+|++|.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            4789999999999999999999999999999997554211  11 1    135789999999999999999999999999


Q ss_pred             CCCCC-----C-CcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCC--CC----------------------CCCcHH
Q 015872          156 ATGRP-----E-EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD--KH----------------------PEVPLM  204 (399)
Q Consensus       156 a~~~~-----~-~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~--~~----------------------~~~~y~  204 (399)
                      |+...     + ....++|+.|+.+++++|++. +++|||++||.+++  ..                      +.+.|+
T Consensus        85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  164 (322)
T PLN02986         85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYP  164 (322)
T ss_pred             CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchH
Confidence            98421     1 234678999999999999986 78999999997531  10                      135699


Q ss_pred             HHHHHHHHHH----HhCCCCEEEEecCccccccccc-------chhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          205 EIKYCTEQFL----QDSGLPHVIIRLCGFMQGLIGQ-------YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       205 ~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+|..+|.++    ++.+++++++||+.+||+....       .+..+..+...++   ....+|+|++|+|++++.+++
T Consensus       165 ~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        165 LSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFN---NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCC---CcCcceeEHHHHHHHHHHHhc
Confidence            9999999866    4479999999999999864321       1223333433332   334589999999999999999


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                      ++... ++||+++ +.+|++|+++++.+.++. .++......               .+.           ....+..|.
T Consensus       242 ~~~~~-~~yni~~-~~~s~~e~~~~i~~~~~~-~~~~~~~~~---------------~~~-----------~~~~~~~d~  292 (322)
T PLN02986        242 TPSAN-GRYIIDG-PIMSVNDIIDILRELFPD-LCIADTNEE---------------SEM-----------NEMICKVCV  292 (322)
T ss_pred             CcccC-CcEEEec-CCCCHHHHHHHHHHHCCC-CCCCCCCcc---------------ccc-----------cccCCccCH
Confidence            87544 4899965 579999999999999873 221111000               000           011122566


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHH
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~  383 (399)
                      ++++ .|||+|+   +|+|+|+++++|+.+
T Consensus       293 ~~~~-~lg~~~~---~l~e~~~~~~~~~~~  318 (322)
T PLN02986        293 EKVK-NLGVEFT---PMKSSLRDTILSLKE  318 (322)
T ss_pred             HHHH-HcCCccc---CHHHHHHHHHHHHHH
Confidence            7775 5999987   899999999999864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.8e-34  Score=264.20  Aligned_cols=227  Identities=23%  Similarity=0.337  Sum_probs=179.9

Q ss_pred             EEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc-cccccCCcE-EEEccCCCCCcHHHHhcCCCEEEECCCCC---
Q 015872           87 LVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGAT-VVNADLSKPETIPATLVGVHTVIDCATGR---  159 (399)
Q Consensus        87 lVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~-~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~---  159 (399)
                      |||||+||+|++|+++|+++|  ++|+++++...... ..+...+.. ++++|++|++++.++++++|+|||+|+..   
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  89999998755433 223333444 99999999999999999999999999832   


Q ss_pred             ---CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------------CCCCcHHHHHHHHHHHHHh-
Q 015872          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------------HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       160 ---~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------------~~~~~y~~~K~~~E~~l~~-  216 (399)
                         +.+.++++|+.||++|+++|++.+++||||+||.++..                   .+...|+.+|..+|+++.+ 
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence               23457789999999999999999999999999986521                   1335799999999998854 


Q ss_pred             C--------CCCEEEEecCcccccccccc---hhhhc-ccccc-ccCCCCcceeceeHHHHHHHHHHHHhC-------Cc
Q 015872          217 S--------GLPHVIIRLCGFMQGLIGQY---AVPIL-EEKSV-WGTDALTRIAYMDTQDIARLTFVALRN-------EK  276 (399)
Q Consensus       217 ~--------g~~~~ilRp~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~-------~~  276 (399)
                      .        .+.+++|||+.+||.....+   +..+. .+... ..+++...++++|++|+|.+++.+++.       ..
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~  240 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPER  240 (280)
T ss_pred             cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccccc
Confidence            2        27899999999998654332   22222 33222 233446677999999999999998763       23


Q ss_pred             cCCcEEEEcCCCCCC-HHHHHHHHHHHhCCCCCe-eecC
Q 015872          277 INGRTLTFSGPRAWT-TQEVITLCERLAGQDANV-TMVP  313 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s-~~e~~~~~~~~~g~~~~~-~~~~  313 (399)
                      ..|+.|+|++++++. +.|++..+.+.+|.+.+. +++|
T Consensus       241 ~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  241 VAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             CCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence            578999999999999 999999999999988665 5554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1.2e-33  Score=270.93  Aligned_cols=268  Identities=17%  Similarity=0.214  Sum_probs=194.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--c--CCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--D--WGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~--~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .|+||||||+||||++++++|+++|++|++++|+......   .+.  .  .+++++.+|++|.+.+.++++++|+|||+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~   84 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV   84 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence            4789999999999999999999999999999997543221   111  1  14788999999999999999999999999


Q ss_pred             CCCCC-----C-CcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC------------------------CCCCcHH
Q 015872          156 ATGRP-----E-EPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK------------------------HPEVPLM  204 (399)
Q Consensus       156 a~~~~-----~-~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~------------------------~~~~~y~  204 (399)
                      |+...     + ....++|+.++.+++++|.+.+ +++|||+||.+++.                        .+.++|+
T Consensus        85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  164 (351)
T PLN02650         85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYF  164 (351)
T ss_pred             CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHH
Confidence            98321     1 2456789999999999999987 78999999874311                        0124799


Q ss_pred             HHHHHHHHHH----HhCCCCEEEEecCccccccccc-----chhhh--cccc-ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          205 EIKYCTEQFL----QDSGLPHVIIRLCGFMQGLIGQ-----YAVPI--LEEK-SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       205 ~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~~~-----~~~~~--~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .+|..+|.++    ++.|++++++||+++||.....     +...+  ..+. ..++ ..+. ++|+|++|+|++++.++
T Consensus       165 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-r~~v~V~Dva~a~~~~l  242 (351)
T PLN02650        165 VSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYS-IIKQ-GQFVHLDDLCNAHIFLF  242 (351)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccC-cCCC-cceeeHHHHHHHHHHHh
Confidence            9999999876    3569999999999999865322     11111  1122 1122 1222 49999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      +++... +.| +++++.+|+.|+++++.+.++.. .+   +....          ....+             ...+..|
T Consensus       243 ~~~~~~-~~~-i~~~~~~s~~el~~~i~~~~~~~-~~---~~~~~----------~~~~~-------------~~~~~~d  293 (351)
T PLN02650        243 EHPAAE-GRY-ICSSHDATIHDLAKMLREKYPEY-NI---PARFP----------GIDED-------------LKSVEFS  293 (351)
T ss_pred             cCcCcC-ceE-EecCCCcCHHHHHHHHHHhCccc-CC---CCCCC----------CcCcc-------------cccccCC
Confidence            876543 478 45556799999999999987631 11   11000          00000             0111245


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      .+++ ++|||+|+  ++++|+|+++++|+++.
T Consensus       294 ~~k~-~~lG~~p~--~~l~egl~~~i~~~~~~  322 (351)
T PLN02650        294 SKKL-TDLGFTFK--YSLEDMFDGAIETCREK  322 (351)
T ss_pred             hHHH-HHhCCCCC--CCHHHHHHHHHHHHHHc
Confidence            6676 57999999  89999999999998654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-33  Score=268.04  Aligned_cols=267  Identities=15%  Similarity=0.190  Sum_probs=198.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .|+||||||+||||+++++.|+++|++|++++|+.......   +.    ..+++++++|++|.+++.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            57899999999999999999999999999999875532211   11    125788999999999999999999999999


Q ss_pred             CCCCC-------CCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCCC------------------------CCCcH
Q 015872          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDKH------------------------PEVPL  203 (399)
Q Consensus       156 a~~~~-------~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~~------------------------~~~~y  203 (399)
                      |+...       .....++|+.++.+++++|.+. ++++||++||..++..                        +.++|
T Consensus        85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  164 (325)
T PLN02989         85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWY  164 (325)
T ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccch
Confidence            98321       1234578999999999999885 5789999999754210                        12469


Q ss_pred             HHHHHHHHHHHH----hCCCCEEEEecCccccccccc-------chhhhccccccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQ-------YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       204 ~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      +.+|..+|+++.    +.+++++++||+.+||.....       ++..+..+...++  ... .+|+|++|+|++++.++
T Consensus       165 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~--~~~-r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        165 VLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFN--TTH-HRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCC--CcC-cCeeEHHHHHHHHHHHh
Confidence            999999998874    469999999999999854321       2233334433332  222 48999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      +++.. +++||+++ +.+|++|+++++.+.++.. .+..-+                 .+..        ......+..|
T Consensus       242 ~~~~~-~~~~ni~~-~~~s~~ei~~~i~~~~~~~-~~~~~~-----------------~~~~--------~~~~~~~~~~  293 (325)
T PLN02989        242 ETPSA-NGRYIIDG-PVVTIKDIENVLREFFPDL-CIADRN-----------------EDIT--------ELNSVTFNVC  293 (325)
T ss_pred             cCccc-CceEEEec-CCCCHHHHHHHHHHHCCCC-CCCCCC-----------------CCcc--------cccccCcCCC
Confidence            87653 45899965 5799999999999998732 111000                 0000        0011233467


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHH
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~  383 (399)
                      .+++++ |||.|.  ++|+|+|+++++|+++
T Consensus       294 ~~k~~~-lg~~p~--~~l~~gi~~~~~~~~~  321 (325)
T PLN02989        294 LDKVKS-LGIIEF--TPTETSLRDTVLSLKE  321 (325)
T ss_pred             HHHHHH-cCCCCC--CCHHHHHHHHHHHHHH
Confidence            788775 999999  8999999999999853

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.8e-33  Score=254.82  Aligned_cols=270  Identities=20%  Similarity=0.238  Sum_probs=201.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--ccccC-----CcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FLRDW-----GATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      .+++|+|||||||||++|++.|+++||.|++.+|++++...  .+...     +.+.+.+|+.|++++.++++|||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            46899999999999999999999999999999999776322  23222     489999999999999999999999999


Q ss_pred             CCCCCC------CCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCCCC------------------------CCcH
Q 015872          155 CATGRP------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKHP------------------------EVPL  203 (399)
Q Consensus       155 ~a~~~~------~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~~------------------------~~~y  203 (399)
                      +|.+.+      +.+..+.++.|+.|++++|++.+ |+|+|++||.++-..+                        ...|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            998322      22567899999999999999998 9999999997541100                        1248


Q ss_pred             HHHHHHHHHH----HHhCCCCEEEEecCcccccccccc-------hhhhccccccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          204 MEIKYCTEQF----LQDSGLPHVIIRLCGFMQGLIGQY-------AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       204 ~~~K~~~E~~----l~~~g~~~~ilRp~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+|..+|+.    .++.|++.+.+.|+.++|+.+...       ....+.|..  .......+.|||++|+|.+++.++
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~--~~~~n~~~~~VdVrDVA~AHv~a~  242 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLA--ETYPNFWLAFVDVRDVALAHVLAL  242 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhccc--ccCCCCceeeEeHHHHHHHHHHHH
Confidence            9999999975    467899999999999998766541       122333321  111233446999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      +++...| .|.+.+. ..++.|+++++.+......    +|.....              ..        ......+..+
T Consensus       243 E~~~a~G-Ryic~~~-~~~~~ei~~~l~~~~P~~~----ip~~~~~--------------~~--------~~~~~~~~~~  294 (327)
T KOG1502|consen  243 EKPSAKG-RYICVGE-VVSIKEIADILRELFPDYP----IPKKNAE--------------EH--------EGFLTSFKVS  294 (327)
T ss_pred             cCcccCc-eEEEecC-cccHHHHHHHHHHhCCCCC----CCCCCCc--------------cc--------cccccccccc
Confidence            9998764 6777775 4679999999999875432    2221100              00        0011112356


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      ..++++++|++..   +++|.+.++.+++.+.
T Consensus       295 ~~k~k~lg~~~~~---~l~e~~~dt~~sl~~~  323 (327)
T KOG1502|consen  295 SEKLKSLGGFKFR---PLEETLSDTVESLREK  323 (327)
T ss_pred             cHHHHhcccceec---ChHHHHHHHHHHHHHh
Confidence            7888777779665   9999999999998654

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=100.00  E-value=1.6e-33  Score=245.57  Aligned_cols=292  Identities=19%  Similarity=0.205  Sum_probs=234.3

Q ss_pred             ccccccccCCCCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC----CcEEEEccCCCCCcH
Q 015872           67 SGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW----GATVVNADLSKPETI  142 (399)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~----~v~~~~~Dl~d~~~l  142 (399)
                      .+++|+++.++..      +.|+|||||+|++++++|.+.|.+|++-.|..+.-...++-.    .+-+...|+.|++++
T Consensus        51 kGtGGRsS~sGiV------aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSI  124 (391)
T KOG2865|consen   51 KGTGGRSSVSGIV------ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSI  124 (391)
T ss_pred             CCCCCcccccceE------EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHH
Confidence            4456666655543      889999999999999999999999999999866554444433    377889999999999


Q ss_pred             HHHhcCCCEEEECCC---CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCC
Q 015872          143 PATLVGVHTVIDCAT---GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGL  219 (399)
Q Consensus       143 ~~~~~~~d~Vi~~a~---~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~  219 (399)
                      +++++..++|||+.|   +..+-.++++|+.+...+++.|+++|+.|||++|+.++.-...+-|.++|...|..+++.-.
T Consensus       125 r~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafP  204 (391)
T KOG2865|consen  125 RAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFP  204 (391)
T ss_pred             HHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhCC
Confidence            999999999999999   45667888999999999999999999999999999998877888999999999999999999


Q ss_pred             CEEEEecCcccc---cccccchhhhcc--ccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          220 PHVIIRLCGFMQ---GLIGQYAVPILE--EKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       220 ~~~ilRp~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      +.||+||+.+||   ++++.+.....+  -.+++..|.++.-.+|||-|||.+|+.+++++...|++|.+.||..+++.|
T Consensus       205 eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~e  284 (391)
T KOG2865|consen  205 EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSE  284 (391)
T ss_pred             cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHH
Confidence            999999999995   455554433332  225666666666689999999999999999998899999999999999999


Q ss_pred             HHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhh--hhhhhhhhccCccccccccccccccCCCCC
Q 015872          295 VITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVAD--RLAFSEVLTSDTVFSVPMSETFDLLGVDAK  365 (399)
Q Consensus       295 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~  365 (399)
                      +++.+-+.+.+...+...|.+.....+....+...+.....  .....+.+..+... .+.....++||..++
T Consensus       285 Lvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~v-lt~~~tleDLgv~~t  356 (391)
T KOG2865|consen  285 LVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLV-LTGAPTLEDLGVVLT  356 (391)
T ss_pred             HHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhh-cCCCCcHhhcCceee
Confidence            99999999988778888888887777777666443333321  11222333222222 334555689999887

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.6e-33  Score=289.91  Aligned_cols=274  Identities=18%  Similarity=0.230  Sum_probs=207.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCC-CCcccc----ccCCcEEEEccCCCCCcHHHHh--cCCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRP-APADFL----RDWGATVVNADLSKPETIPATL--VGVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~-~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~--~~~d~Vi  153 (399)
                      +|+|||||||||||++|++.|+++  |++|++++|... .....+    ...+++++.+|++|.+.+..++  .++|+||
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            578999999999999999999998  689999987521 111111    1236899999999988887766  5899999


Q ss_pred             ECCCCCC-------CCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC----------------CCCCcHHHHHHH
Q 015872          154 DCATGRP-------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK----------------HPEVPLMEIKYC  209 (399)
Q Consensus       154 ~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~----------------~~~~~y~~~K~~  209 (399)
                      |+|+...       +..+.++|+.++.+++++|++.+ +++|||+||..++.                .|.++|+.+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            9998432       23456799999999999999987 89999999975432                145689999999


Q ss_pred             HHHHHH----hCCCCEEEEecCccccccc------ccchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          210 TEQFLQ----DSGLPHVIIRLCGFMQGLI------GQYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       210 ~E~~l~----~~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      +|++++    +.+++++++||+++||...      ..++..+..+..+.. +++++.++|+|++|+|+++..++++.. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999885    3689999999999997532      223333444443322 234556699999999999999997654 4


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCCe--eecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDANV--TMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET  356 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      +++||+++++.+|+.|+++.+.+.+|.+...  ...+..              +      +       .+..+..|++++
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~--------------p------~-------~~~~~~~d~~k~  297 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENR--------------P------F-------NDQRYFLDDQKL  297 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCC--------------C------C-------CcceeecCHHHH
Confidence            6899999999999999999999999976432  111100              0      0       112234677888


Q ss_pred             ccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       357 ~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      + +|||+|+  ++++|+|+++++|++++...
T Consensus       298 ~-~lGw~p~--~~~~egl~~~i~w~~~~~~~  325 (668)
T PLN02260        298 K-KLGWQER--TSWEEGLKKTMEWYTSNPDW  325 (668)
T ss_pred             H-HcCCCCC--CCHHHHHHHHHHHHHhChhh
Confidence            6 6999998  89999999999999877553

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=6.2e-33  Score=284.99  Aligned_cols=258  Identities=22%  Similarity=0.313  Sum_probs=199.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |+|+||||+||||++++++|+++|++|++++|+.....    ..+++++.+|++|.+++.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW----PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            57999999999999999999999999999999743221    126889999999999999999999999999984332  


Q ss_pred             chhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhhcc
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILE  243 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~  243 (399)
                      ..++|+.++.+++++|++.++++||++||..            |..+|+++++++++++++||+++||.....++..+..
T Consensus        75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~  142 (854)
T PRK05865         75 NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFA  142 (854)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHHHHhc
Confidence            5679999999999999999999999999864            8999999999999999999999998754444444332


Q ss_pred             ccccccCC-CCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHH
Q 015872          244 EKSVWGTD-ALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ  322 (399)
Q Consensus       244 ~~~~~~~~-~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~  322 (399)
                       ..+++.+ ....++|+|++|+|+++..+++++...+++||+++++.+|++|+++.+.+...      .++.+....   
T Consensus       143 -~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~------~v~~~~~~~---  212 (854)
T PRK05865        143 -LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMV------PIGSPVLRR---  212 (854)
T ss_pred             -CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhc------cCCchhhhh---
Confidence             2334333 34456999999999999999976544567999999999999999999876431      111111000   


Q ss_pred             HhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                          ......    .   ..  ......+|.++++++|||+|+  ++++|+|+++++|++..
T Consensus       213 ----~~~~~~----~---~~--~~~~~~~D~sKar~~LGw~P~--~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        213 ----VTSFAE----L---EL--LHSAPLMDVTLLRDRWGFQPA--WNAEECLEDFTLAVRGR  259 (854)
T ss_pred             ----ccchhh----h---hc--ccCCccCCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHhh
Confidence                000000    0   00  011223678999999999999  89999999999999764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=5.9e-33  Score=262.18  Aligned_cols=267  Identities=14%  Similarity=0.173  Sum_probs=198.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc----CCCEEEECCCCC-
Q 015872           86 ILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR-  159 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~----~~d~Vi~~a~~~-  159 (399)
                      |||||||||||+++++.|+++|+ +|.+++|.....  .+.......+.+|+.+.+.+..+.+    ++|+|||+|+.. 
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            68999999999999999999997 788887753321  1222223467788888887776653    799999999832 


Q ss_pred             ----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh------
Q 015872          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD------  216 (399)
Q Consensus       160 ----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~------  216 (399)
                          ++....++|+.++.+++++|++.++ +||++||.+++.             .|.++|+.+|..+|.++++      
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  157 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEA  157 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhc
Confidence                2334557899999999999999987 899999976543             2567899999999998864      


Q ss_pred             CCCCEEEEecCcccccccc----------cchhhhccccc--ccc-----CCCCcceeceeHHHHHHHHHHHHhCCccCC
Q 015872          217 SGLPHVIIRLCGFMQGLIG----------QYAVPILEEKS--VWG-----TDALTRIAYMDTQDIARLTFVALRNEKING  279 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~--~~~-----~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g  279 (399)
                      .+++++++||+.+||....          .++..+..+..  +++     .++++.++|+|++|++++++.++..  ..+
T Consensus       158 ~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~~  235 (314)
T TIGR02197       158 LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--GVS  235 (314)
T ss_pred             cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc--ccC
Confidence            3578999999999975421          12223333332  222     2345566999999999999999987  245


Q ss_pred             cEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccc
Q 015872          280 RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDL  359 (399)
Q Consensus       280 ~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      ++||+++++.+|++|+++.+.+.+|.+.++...+.+..            ..   ...        ......|.++++++
T Consensus       236 ~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------------~~---~~~--------~~~~~~~~~k~~~~  292 (314)
T TIGR02197       236 GIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEA------------LR---GKY--------QYFTQADITKLRAA  292 (314)
T ss_pred             ceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccc------------cc---ccc--------ccccccchHHHHHh
Confidence            79999999999999999999999998755444332210            00   000        00122577999999


Q ss_pred             cCCCCCccccHHHHHHHHHHHHH
Q 015872          360 LGVDAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       360 LG~~p~~~~~lee~l~~~~~~~~  382 (399)
                      |||+|+  .+++|+++++++|+.
T Consensus       293 l~~~p~--~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       293 GYYGPF--TTLEEGVKDYVQWLL  313 (314)
T ss_pred             cCCCCc--ccHHHHHHHHHHHHh
Confidence            999999  899999999999974

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.8e-33  Score=262.33  Aligned_cols=272  Identities=20%  Similarity=0.236  Sum_probs=204.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCC-Cc---ccc-ccCCcEEEEccCCCCCcHHHHhcC--CCEEEEC
Q 015872           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PA---DFL-RDWGATVVNADLSKPETIPATLVG--VHTVIDC  155 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~-~~---~~l-~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~  155 (399)
                      +|+||||||+||++++++|++.|  ++|++++|.... ..   ..+ ...+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            49999999999999999999987  789988874211 11   111 123688999999999999999987  9999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCCC--------------CCCCcHHHHHHHHHHH
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDK--------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~  213 (399)
                      |+..       ....+.++|+.++.+++++|++.+.+ ++|++||..++.              .+...|+.+|..+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            9832       22345678999999999999987544 899999965432              2345799999999988


Q ss_pred             HH----hCCCCEEEEecCccccccc------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCCcEE
Q 015872          214 LQ----DSGLPHVIIRLCGFMQGLI------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRTL  282 (399)
Q Consensus       214 l~----~~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~  282 (399)
                      ++    +.+++++++||+.+|+...      ..++..+..+..+. ...++..++|+|++|+|+++..+++++. .+++|
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~  239 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGETY  239 (317)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCceE
Confidence            74    4689999999999997432      22334444444332 2234566799999999999999998653 56899


Q ss_pred             EEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCC
Q 015872          283 TFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGV  362 (399)
Q Consensus       283 ~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~  362 (399)
                      |+++++.+|+.|+++.+.+.+|.+..+......             .+.             .+..+..|+++++++|||
T Consensus       240 ~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~-------------~~~~~~~~~~k~~~~lG~  293 (317)
T TIGR01181       240 NIGGGNERTNLEVVETILELLGKDEDLITHVED-------------RPG-------------HDRRYAIDASKIKRELGW  293 (317)
T ss_pred             EeCCCCceeHHHHHHHHHHHhCCCcccccccCC-------------Ccc-------------chhhhcCCHHHHHHHhCC
Confidence            999999999999999999999975332111000             000             111233677899999999


Q ss_pred             CCCccccHHHHHHHHHHHHHHhh
Q 015872          363 DAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       363 ~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      .|+  ++++|+++++++|++++.
T Consensus       294 ~p~--~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       294 APK--YTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             CCC--CcHHHHHHHHHHHHHhcc
Confidence            998  799999999999987553

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=4.1e-33  Score=261.09  Aligned_cols=257  Identities=19%  Similarity=0.160  Sum_probs=189.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~-  160 (399)
                      |+||||||+||||++|++.|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||||+... 
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            579999999999999999999999 7999988521            24689999999999988  5899999998321 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                            +...+.+|+.++.+++++|++.++ +|||+||..++             ..|.++|+.+|..+|++++....++
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~  146 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKH  146 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence                  233457899999999999999997 79999996442             1345679999999999999888899


Q ss_pred             EEEecCccccccc----ccchhhhcccc--ccccC--CCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHH
Q 015872          222 VIIRLCGFMQGLI----GQYAVPILEEK--SVWGT--DALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       222 ~ilRp~~~~~~~~----~~~~~~~~~~~--~~~~~--~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~  293 (399)
                      +++|++++||...    ..++..+..+.  .++++  +...+ .+.+++|+++++..+++.+.. +++||+++++.+|+.
T Consensus       147 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~-~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~~s~~  224 (299)
T PRK09987        147 LIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTG-AELLADCTAHAIRVALNKPEV-AGLYHLVASGTTTWH  224 (299)
T ss_pred             EEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCC-HHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCCccHH
Confidence            9999999997532    22333333343  33443  22222 445677788888888765433 359999999999999


Q ss_pred             HHHHHHHHHh---CCCC---CeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCcc
Q 015872          294 EVITLCERLA---GQDA---NVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDI  367 (399)
Q Consensus       294 e~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~  367 (399)
                      |+++.+.+.+   |.+.   ++.+++....          +.+            ..+......|.+++++.|||+|.  
T Consensus       225 e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~----------~~~------------~~rp~~~~ld~~k~~~~lg~~~~--  280 (299)
T PRK09987        225 DYAALVFEEARKAGITLALNKLNAVPTSAY----------PTP------------ARRPHNSRLNTEKFQQNFALVLP--  280 (299)
T ss_pred             HHHHHHHHHHHhcCCCcCcCeeeecchhhc----------CCC------------CCCCCcccCCHHHHHHHhCCCCc--
Confidence            9999998864   4333   2334333211          000            01222334678999999999986  


Q ss_pred             ccHHHHHHHHHHHH
Q 015872          368 ITLEKYLQDYFTNI  381 (399)
Q Consensus       368 ~~lee~l~~~~~~~  381 (399)
                       +++|+|+++++.+
T Consensus       281 -~~~~~l~~~~~~~  293 (299)
T PRK09987        281 -DWQVGVKRMLTEL  293 (299)
T ss_pred             -cHHHHHHHHHHHH
Confidence             9999999998755

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-32  Score=259.16  Aligned_cols=270  Identities=27%  Similarity=0.359  Sum_probs=208.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCC-CEEEECCCCC----
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV-HTVIDCATGR----  159 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-d~Vi~~a~~~----  159 (399)
                      +|||||||||||++|+++|+++||+|++++|...+.....  .+++++.+|++|.+.+.++.+++ |+|||+|+..    
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999766544333  57889999999998888888888 9999999832    


Q ss_pred             C----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC---------------CCCCcHHHHHHHHHHHHHh----
Q 015872          160 P----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---------------HPEVPLMEIKYCTEQFLQD----  216 (399)
Q Consensus       160 ~----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~---------------~~~~~y~~~K~~~E~~l~~----  216 (399)
                      .    +..+..+|+.++.+++++|++.++++|||.||.++..               .|.++|+.+|..+|+++.+    
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~  159 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL  159 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            1    1237789999999999999999999999988854321               1223599999999999854    


Q ss_pred             CCCCEEEEecCccccccccc-----ch----hhhccccc--cccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          217 SGLPHVIIRLCGFMQGLIGQ-----YA----VPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      .|++++++||+++||.....     +.    ..+..+..  .+..++...++++|++|++++++.+++++...  +||++
T Consensus       160 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~  237 (314)
T COG0451         160 YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--VFNIG  237 (314)
T ss_pred             hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEEeC
Confidence            46999999999999754322     11    11333433  23334455569999999999999999987653  99999


Q ss_pred             CCC-CCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCC
Q 015872          286 GPR-AWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVD  363 (399)
Q Consensus       286 ~~~-~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~  363 (399)
                      +++ .++++|+++.+.+.+|.+.+ +...+..                         ...........+.+++++.|||.
T Consensus       238 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~lg~~  292 (314)
T COG0451         238 SGTAEITVRELAEAVAEAVGSKAPLIVYIPLG-------------------------RRGDLREGKLLDISKARAALGWE  292 (314)
T ss_pred             CCCCcEEHHHHHHHHHHHhCCCCcceeecCCC-------------------------CCCcccccccCCHHHHHHHhCCC
Confidence            997 89999999999999998766 3332210                         00011222336778899999999


Q ss_pred             CCccccHHHHHHHHHHHHHHhh
Q 015872          364 AKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       364 p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      |+  .++++++.++..|+....
T Consensus       293 p~--~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         293 PK--VSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             CC--CCHHHHHHHHHHHHHHhh
Confidence            98  799999999999987543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.1e-32  Score=256.94  Aligned_cols=259  Identities=19%  Similarity=0.162  Sum_probs=194.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCC--CEEEECCCCCC--
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV--HTVIDCATGRP--  160 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~--d~Vi~~a~~~~--  160 (399)
                      +|||||||||+|++++++|+++||+|++++|.                .+|+.|.+++.++++++  |+|||+++...  
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            48999999999999999999999999999985                48999999999999865  99999998422  


Q ss_pred             -----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          161 -----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       161 -----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                           ....+++|+.++.+++++|++.+. +||++||..++.             .+.++|+.+|..+|++++..+.+++
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~  143 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNAL  143 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeE
Confidence                 223467899999999999999886 899999975532             2346799999999999999999999


Q ss_pred             EEecCccccccc-----ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHH
Q 015872          223 IIRLCGFMQGLI-----GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       223 ilRp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                      ++||+++||...     ..++..+..+..+...+ +...+++|++|+|+++..+++.+...+++||+++++.+|+.|+++
T Consensus       144 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  222 (287)
T TIGR01214       144 IVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD-DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQ  222 (287)
T ss_pred             EEEeeecccCCCCCCHHHHHHHHhhcCCCceEec-CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHH
Confidence            999999997542     12223333333333222 345689999999999999998864567899999999999999999


Q ss_pred             HHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH
Q 015872          298 LCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY  377 (399)
Q Consensus       298 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~  377 (399)
                      .+.+.+|.+....+.+..  .....  ..+  +          ...........|+++++++|||++.   +++++|++.
T Consensus       223 ~i~~~~~~~~~~~~~~~~--~~~~~--~~~--~----------~~~~~~~~~~~d~~~~~~~lg~~~~---~~~~~l~~~  283 (287)
T TIGR01214       223 AIFEEAGADGLLLHPQEV--KPISS--KEY--P----------RPARRPAYSVLDNTKLVKTLGTPLP---HWREALRAY  283 (287)
T ss_pred             HHHHHhCcccccccCcee--EeecH--HHc--C----------CCCCCCCccccchHHHHHHcCCCCc---cHHHHHHHH
Confidence            999999976542222110  00000  000  0          0001112234788999999999554   999999887


Q ss_pred             HHH
Q 015872          378 FTN  380 (399)
Q Consensus       378 ~~~  380 (399)
                      +++
T Consensus       284 ~~~  286 (287)
T TIGR01214       284 LQE  286 (287)
T ss_pred             Hhh
Confidence            653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.2e-32  Score=262.52  Aligned_cols=270  Identities=16%  Similarity=0.189  Sum_probs=192.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----ccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..|+||||||+||||++++++|+++|++|++++|+..+.....    ...+++++.+|++|.+.+.++++++|+|||+|+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   88 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA   88 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence            3578999999999999999999999999999999754322111    113578999999999999999999999999998


Q ss_pred             CCC---------CCcch-----hccHHHHHHHHHHHHHcC-CcEEEEecccCCCCC------------------------
Q 015872          158 GRP---------EEPIK-----KVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKH------------------------  198 (399)
Q Consensus       158 ~~~---------~~~~~-----~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~------------------------  198 (399)
                      ...         +..+.     +.|+.++.+++++|.+.+ +++||++||..++..                        
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~  168 (353)
T PLN02896         89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN  168 (353)
T ss_pred             cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence            321         11222     234689999999998875 889999999755420                        


Q ss_pred             ---CCCcHHHHHHHHHHHH----HhCCCCEEEEecCcccccccc----cchhhhc---ccc-cccc--CCCCc---ceec
Q 015872          199 ---PEVPLMEIKYCTEQFL----QDSGLPHVIIRLCGFMQGLIG----QYAVPIL---EEK-SVWG--TDALT---RIAY  258 (399)
Q Consensus       199 ---~~~~y~~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~~----~~~~~~~---~~~-~~~~--~~~~~---~~~~  258 (399)
                         +.++|+.+|..+|+++    ++.+++++++||+++||....    .++..+.   .+. ..++  .+.+.   .++|
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~df  248 (353)
T PLN02896        169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIAL  248 (353)
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeE
Confidence               1137999999999876    447899999999999986432    1121111   121 1111  01111   2489


Q ss_pred             eeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCC-CCeeecCHHHHHHHHHHhhhhhhhhhhhhhh
Q 015872          259 MDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQD-ANVTMVPVSVLRFTRQLTRFFEWTNDVADRL  337 (399)
Q Consensus       259 v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (399)
                      +|++|+|++++.+++.+.. +.+|+++ ++.+++.|+++.+.+.++.. ..+...+..              ..      
T Consensus       249 i~v~Dva~a~~~~l~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--------------~~------  306 (353)
T PLN02896        249 VHIEDICDAHIFLMEQTKA-EGRYICC-VDSYDMSELINHLSKEYPCSNIQVRLDEEK--------------RG------  306 (353)
T ss_pred             EeHHHHHHHHHHHHhCCCc-CccEEec-CCCCCHHHHHHHHHHhCCCCCccccccccc--------------cC------
Confidence            9999999999999987543 3468654 56799999999999998732 111111100              00      


Q ss_pred             hhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          338 AFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                              +.....+.++++ .|||+|+  ++++++|+++++|+++.
T Consensus       307 --------~~~~~~~~~~~~-~lGw~p~--~~l~~~i~~~~~~~~~~  342 (353)
T PLN02896        307 --------SIPSEISSKKLR-DLGFEYK--YGIEEIIDQTIDCCVDH  342 (353)
T ss_pred             --------ccccccCHHHHH-HcCCCcc--CCHHHHHHHHHHHHHHC
Confidence                    001123567775 5999999  89999999999999754

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=6.3e-32  Score=250.87  Aligned_cols=301  Identities=16%  Similarity=0.210  Sum_probs=227.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCC-Ccc-ccc---cCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PAD-FLR---DWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~-~~~-~l~---~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      ++.+++||||+||+|++|+++|++++  .+|++++..+.. ... ...   ...++.+++|++|..++..++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            35689999999999999999999998  899999987542 111 111   346899999999999999999999 7887


Q ss_pred             CCC-------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------C---CCCCcHHHHHHHHH
Q 015872          155 CAT-------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------K---HPEVPLMEIKYCTE  211 (399)
Q Consensus       155 ~a~-------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~---~~~~~y~~~K~~~E  211 (399)
                      ||+       ..+.+..+++|+.||.+++++|++.|++++||+||.++.             +   ....+|+.+|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            776       224667788999999999999999999999999998651             1   11247999999999


Q ss_pred             HHHHhCC----CCEEEEecCcccccccccchh---h-hccccccccCC-CCcceeceeHHHHHHHHHHHHhC-----Ccc
Q 015872          212 QFLQDSG----LPHVIIRLCGFMQGLIGQYAV---P-ILEEKSVWGTD-ALTRIAYMDTQDIARLTFVALRN-----EKI  277 (399)
Q Consensus       212 ~~l~~~g----~~~~ilRp~~~~~~~~~~~~~---~-~~~~~~~~~~~-~~~~~~~v~v~Dva~~i~~~l~~-----~~~  277 (399)
                      +++++..    +.+++|||.++||..-..+..   . +..+...+..+ .....++++++.++.+++.+...     +..
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~  241 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSV  241 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCcc
Confidence            9996633    789999999999865444332   2 22343333222 24556999999999998887542     556


Q ss_pred             CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhh-hhhhhhhhhhhccCccccccccc
Q 015872          278 NGRTLTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTND-VADRLAFSEVLTSDTVFSVPMSE  355 (399)
Q Consensus       278 ~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  355 (399)
                      .|++|+|.++.++..-++...+.+.+|...+ ...+|.++....+.+.++..+... ....+.-..+-........+..|
T Consensus       242 ~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~k  321 (361)
T KOG1430|consen  242 NGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEK  321 (361)
T ss_pred             CceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHH
Confidence            8999999999998888888899999999877 777898888888887776443222 22222211111122333456799


Q ss_pred             cccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          356 TFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       356 ~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      ++++||+.|.  .+++|++++++.|+....
T Consensus       322 A~~~lgY~P~--~~~~e~~~~~~~~~~~~~  349 (361)
T KOG1430|consen  322 AKRELGYKPL--VSLEEAIQRTIHWVASES  349 (361)
T ss_pred             HHHhhCCCCc--CCHHHHHHHHHHHHhhhh
Confidence            9999999999  899999999999876443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.6e-32  Score=258.62  Aligned_cols=262  Identities=12%  Similarity=0.138  Sum_probs=186.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCC---c-HHHHhc-----CCCEEEECC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---T-IPATLV-----GVHTVIDCA  156 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~---~-l~~~~~-----~~d~Vi~~a  156 (399)
                      ||||||+||||++|+++|+++|++|+++.|+...... .    ....++|+.|..   . +.+++.     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-H----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            8999999999999999999999988887776433211 0    122345665543   2 233332     689999999


Q ss_pred             CCC-----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh--
Q 015872          157 TGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD--  216 (399)
Q Consensus       157 ~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~--  216 (399)
                      +..     ....+.+.|+.++.+++++|++.++ +||++||..++.             .|.++|+.+|..+|+++++  
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  155 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQIL  155 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            721     1223567899999999999999998 699999975432             2446799999999988754  


Q ss_pred             --CCCCEEEEecCccccccccc------c----hhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEE
Q 015872          217 --SGLPHVIIRLCGFMQGLIGQ------Y----AVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTL  282 (399)
Q Consensus       217 --~g~~~~ilRp~~~~~~~~~~------~----~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~  282 (399)
                        .+++++++||+++||.....      .    ...+..+.  .++++++...++|+|++|+|++++.+++.+.  +++|
T Consensus       156 ~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~--~~~y  233 (308)
T PRK11150        156 PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV--SGIF  233 (308)
T ss_pred             HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--CCeE
Confidence              58999999999999753211      1    12344443  2343344556799999999999999998653  4699


Q ss_pred             EEcCCCCCCHHHHHHHHHHHhCCC-CCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccC
Q 015872          283 TFSGPRAWTTQEVITLCERLAGQD-ANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLG  361 (399)
Q Consensus       283 ~l~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG  361 (399)
                      |+++++.+|+.|+++.+.+.+|.. ......|....             ..            .......|++++++ +|
T Consensus       234 ni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~-------------~~------------~~~~~~~d~~k~~~-~g  287 (308)
T PRK11150        234 NCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLK-------------GR------------YQAFTQADLTKLRA-AG  287 (308)
T ss_pred             EcCCCCceeHHHHHHHHHHHhCCCcceeccCccccc-------------cc------------cceecccCHHHHHh-cC
Confidence            999999999999999999999853 12212121100             00            00112257788875 79


Q ss_pred             CCCCccccHHHHHHHHHHHHH
Q 015872          362 VDAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       362 ~~p~~~~~lee~l~~~~~~~~  382 (399)
                      |+|.. ++++|+|+++++|+.
T Consensus       288 ~~p~~-~~~~~gl~~~~~~~~  307 (308)
T PRK11150        288 YDKPF-KTVAEGVAEYMAWLN  307 (308)
T ss_pred             CCCCC-CCHHHHHHHHHHHhh
Confidence            99851 499999999999974

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.2e-31  Score=254.47  Aligned_cols=270  Identities=22%  Similarity=0.284  Sum_probs=202.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc----CCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~----~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~  158 (399)
                      +||||||+|+||.++++.|+++|++|++++|........+..    .+++.+.+|+.|.+++.++++  ++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643322211111    147788999999999999886  69999999983


Q ss_pred             C-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh--
Q 015872          159 R-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD--  216 (399)
Q Consensus       159 ~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~--  216 (399)
                      .       .....++.|+.++.+++++|.+.++++||++||..++.             .+..+|+.+|..+|.+++.  
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence            2       22344578999999999999999999999999875532             1346799999999998753  


Q ss_pred             ---CCCCEEEEecCccccccccc-----------chh---hhcc-c-c--cccc-----CCCCcceeceeHHHHHHHHHH
Q 015872          217 ---SGLPHVIIRLCGFMQGLIGQ-----------YAV---PILE-E-K--SVWG-----TDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       217 ---~g~~~~ilRp~~~~~~~~~~-----------~~~---~~~~-~-~--~~~~-----~~~~~~~~~v~v~Dva~~i~~  270 (399)
                         .+++++++||+.+|+.....           ++.   .... . .  .+++     .++..+.+|||++|+|++++.
T Consensus       161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~  240 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLA  240 (328)
T ss_pred             HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHH
Confidence               68999999999998753211           111   1111 1 1  1111     234556799999999999999


Q ss_pred             HHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcc
Q 015872          271 ALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTV  348 (399)
Q Consensus       271 ~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (399)
                      +++..  ...+++||+++++.+|++|+++.+.+.+|++.++...+...              .+.             ..
T Consensus       241 ~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~--------------~~~-------------~~  293 (328)
T TIGR01179       241 ALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRP--------------GDP-------------AS  293 (328)
T ss_pred             HHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCC--------------ccc-------------cc
Confidence            99752  23568999999999999999999999999887765544210              000             01


Q ss_pred             ccccccccccccCCCCCcccc-HHHHHHHHHHHHHH
Q 015872          349 FSVPMSETFDLLGVDAKDIIT-LEKYLQDYFTNILK  383 (399)
Q Consensus       349 ~~~~~~~~~~~LG~~p~~~~~-lee~l~~~~~~~~~  383 (399)
                      +..+.++++++|||+|+  .+ ++++++++++|+.+
T Consensus       294 ~~~~~~~~~~~lg~~p~--~~~l~~~~~~~~~~~~~  327 (328)
T TIGR01179       294 LVADASKIRRELGWQPK--YTDLEIIIKTAWRWESR  327 (328)
T ss_pred             hhcchHHHHHHhCCCCC--cchHHHHHHHHHHHHhc
Confidence            12467888899999998  66 99999999999865

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=5.9e-32  Score=254.39  Aligned_cols=255  Identities=15%  Similarity=0.140  Sum_probs=193.3

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC------
Q 015872           87 LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG------  158 (399)
Q Consensus        87 lVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~------  158 (399)
                      |||||+||||++|++.|++.|++|+++.+.               ..+|++|.+++.++++  ++|+|||||+.      
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999998866542               1489999999998887  57999999973      


Q ss_pred             --CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-----------------CCC-cHHHHHHHHHHHH----
Q 015872          159 --RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----------------PEV-PLMEIKYCTEQFL----  214 (399)
Q Consensus       159 --~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-----------------~~~-~y~~~K~~~E~~l----  214 (399)
                        ..+..++++|+.++.+++++|++.++++||++||..++..                 |.. .|+.+|..+|+++    
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~  145 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYR  145 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence              1234566799999999999999999999999999765321                 112 4999999999766    


Q ss_pred             HhCCCCEEEEecCcccccccc----------cchhh----hcccccc-c-cCCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          215 QDSGLPHVIIRLCGFMQGLIG----------QYAVP----ILEEKSV-W-GTDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       215 ~~~g~~~~ilRp~~~~~~~~~----------~~~~~----~~~~~~~-~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      ++.+++++++||+++||....          .++..    ...+.++ . ...+...++|+|++|++++++.++++.. .
T Consensus       146 ~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~  224 (306)
T PLN02725        146 IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-G  224 (306)
T ss_pred             HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-c
Confidence            357899999999999976421          11111    1223222 1 2334556699999999999999998754 3


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFD  358 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      ++.||+++++.+|+.|+++.+.+.+|.+.++...+..              +...             .....|+++++ 
T Consensus       225 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--------------~~~~-------------~~~~~d~~k~~-  276 (306)
T PLN02725        225 AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSK--------------PDGT-------------PRKLMDSSKLR-  276 (306)
T ss_pred             CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCC--------------CCcc-------------cccccCHHHHH-
Confidence            4678999999999999999999999976655432211              0000             01125678885 


Q ss_pred             ccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          359 LLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       359 ~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      .|||+|+  ++++|+++++++|+++++++
T Consensus       277 ~lg~~p~--~~~~~~l~~~~~~~~~~~~~  303 (306)
T PLN02725        277 SLGWDPK--FSLKDGLQETYKWYLENYET  303 (306)
T ss_pred             HhCCCCC--CCHHHHHHHHHHHHHhhhhc
Confidence            5999998  79999999999999988764

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-32  Score=237.42  Aligned_cols=279  Identities=16%  Similarity=0.183  Sum_probs=213.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecC----CCC-CccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRP----RPA-PADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~----~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      ++|+||||.||||++.++.+...  .+..+.++.-    .-+ ........+.+++++|+.|...+...+.  .+|.|||
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            78999999999999999999987  4666666541    111 1111123478999999999988887775  6999999


Q ss_pred             CCC-------CCCCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCC--------------CCCCCcHHHHHHHHHH
Q 015872          155 CAT-------GRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       155 ~a~-------~~~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~--------------~~~~~~y~~~K~~~E~  212 (399)
                      +|+       ..+.-.+...|+.++..|+++++.. ++++|||+||..++              ..|.+||+++|+++|.
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~  166 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM  166 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence            998       2345556679999999999999999 58999999997653              3567899999999999


Q ss_pred             HHH----hCCCCEEEEecCcccccc------cccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          213 FLQ----DSGLPHVIIRLCGFMQGL------IGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       213 ~l~----~~g~~~~ilRp~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                      +++    ++|++++++|.++|||+.      +..|+.....++  ++.++|-+.+ +|+|++|+++++..+++++. .|+
T Consensus       167 ~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~r-s~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  167 LVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTR-SYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccce-eeEeHHHHHHHHHHHHhcCC-ccc
Confidence            885    478999999999999753      233333333333  5566665666 99999999999999999843 689


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      +|||+.....+..|+++.+.+..++...-...+++              +..+.      ..-..|..+..+.+|++ .|
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~--------------~~~v~------dRp~nd~Ry~~~~eKik-~L  303 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPF--------------IFFVE------DRPYNDLRYFLDDEKIK-KL  303 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCc--------------ceecC------CCCcccccccccHHHHH-hc
Confidence            99999999999999999999988763321121111              11111      22224555778889998 99


Q ss_pred             CCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ||+|+  +++++||+.+++|+.++.++
T Consensus       304 Gw~~~--~p~~eGLrktie~y~~~~~~  328 (331)
T KOG0747|consen  304 GWRPT--TPWEEGLRKTIEWYTKNFKD  328 (331)
T ss_pred             CCccc--CcHHHHHHHHHHHHHhhhcc
Confidence            99999  89999999999999988744

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=7.2e-32  Score=255.48  Aligned_cols=261  Identities=12%  Similarity=0.140  Sum_probs=194.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ++|+||||||+||||+++++.|+++|  ++|++++|+......   .+...+++++++|++|.+.+.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            45789999999999999999999986  789999987443211   1122358899999999999999999999999999


Q ss_pred             CCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHH-------hCCCCEE
Q 015872          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQ-------DSGLPHV  222 (399)
Q Consensus       157 ~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~-------~~g~~~~  222 (399)
                      |..       ++....++|+.|+.+++++|++.++++||++||.... .|.++|+.+|..+|.+++       +.|++++
T Consensus        83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~  161 (324)
T TIGR03589        83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-NPINLYGATKLASDKLFVAANNISGSKGTRFS  161 (324)
T ss_pred             ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-CCCCHHHHHHHHHHHHHHHHHhhccccCcEEE
Confidence            832       1224567999999999999999999999999997643 466889999999998874       3689999


Q ss_pred             EEecCcccccc---cccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHH
Q 015872          223 IIRLCGFMQGL---IGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITL  298 (399)
Q Consensus       223 ilRp~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~  298 (399)
                      ++||+++||..   +..+...+..+. .+...++....+|+|++|++++++.++++.. .+++|+ ++++.+++.|+++.
T Consensus       162 ~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~~~-~~~~~~sv~el~~~  239 (324)
T TIGR03589       162 VVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERML-GGEIFV-PKIPSMKITDLAEA  239 (324)
T ss_pred             EEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCC-CCCEEc-cCCCcEEHHHHHHH
Confidence            99999999742   223333333343 2322234555599999999999999998753 467885 55557999999999


Q ss_pred             HHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH
Q 015872          299 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY  377 (399)
Q Consensus       299 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~  377 (399)
                      +.+..+.  .+.....                .+...            ....|.++++++|||+|+  .+++++++.+
T Consensus       240 i~~~~~~--~~~~~~~----------------g~~~~------------~~~~~~~~~~~~lg~~~~--~~l~~~~~~~  286 (324)
T TIGR03589       240 MAPECPH--KIVGIRP----------------GEKLH------------EVMITEDDARHTYELGDY--YAILPSISFW  286 (324)
T ss_pred             HHhhCCe--eEeCCCC----------------CchhH------------hhhcChhhhhhhcCCCCe--EEEccccccc
Confidence            9886432  1211111                00000            011467899999999999  8999998744

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=4.6e-31  Score=253.87  Aligned_cols=256  Identities=16%  Similarity=0.135  Sum_probs=191.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--ccc--------cCCcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FLR--------DWGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--~l~--------~~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      .+++|+||||||+||||+++++.|+++||+|++++|+......  .+.        ..+++++++|++|.+++.++++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            4557899999999999999999999999999999887433211  110        124788999999999999999999


Q ss_pred             CEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccC--CCC----------------------
Q 015872          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHN--CDK----------------------  197 (399)
Q Consensus       150 d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~--~~~----------------------  197 (399)
                      |+|||+++..       ....+.++|+.++.+++++|++. +++||||+||..  ++.                      
T Consensus       130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~  209 (367)
T PLN02686        130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC  209 (367)
T ss_pred             cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence            9999999832       11345578999999999999986 799999999952  110                      


Q ss_pred             -CCCCcHHHHHHHHHHHHH----hCCCCEEEEecCccccccccc----chhhhcccc-ccccCCCCcceeceeHHHHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQ----YAVPILEEK-SVWGTDALTRIAYMDTQDIARL  267 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~  267 (399)
                       .+.++|+.+|..+|+++.    +.|++++++||+++||+....    ....++.+. .+++.   ...+|+||+|+|++
T Consensus       210 ~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~---g~~~~v~V~Dva~A  286 (367)
T PLN02686        210 RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLAD---GLLATADVERLAEA  286 (367)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCC---CCcCeEEHHHHHHH
Confidence             023469999999999873    469999999999999864321    122333333 23332   23479999999999


Q ss_pred             HHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhcc
Q 015872          268 TFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTS  345 (399)
Q Consensus       268 i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (399)
                      ++.+++..  ...+++| +++++.++++|+++.+.+.+|.+......+...             +.             .
T Consensus       287 ~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------------~~-------------d  339 (367)
T PLN02686        287 HVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSS-------------DD-------------T  339 (367)
T ss_pred             HHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhh-------------cC-------------C
Confidence            99999852  2345678 777788999999999999999876544332210             00             1


Q ss_pred             CccccccccccccccCCCCC
Q 015872          346 DTVFSVPMSETFDLLGVDAK  365 (399)
Q Consensus       346 ~~~~~~~~~~~~~~LG~~p~  365 (399)
                      ...+..|.+|++++|||.|+
T Consensus       340 ~~~~~~d~~kl~~~l~~~~~  359 (367)
T PLN02686        340 PARFELSNKKLSRLMSRTRR  359 (367)
T ss_pred             cccccccHHHHHHHHHHhhh
Confidence            22344678999999999997

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.97  E-value=7.8e-32  Score=250.19  Aligned_cols=255  Identities=19%  Similarity=0.217  Sum_probs=184.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCC--
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR--  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~--  159 (399)
                      ||||||||+|++|++|++.|.++|++|+++.|.                ..|++|.+.+.+.++  .+|+|||||+..  
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            689999999999999999999999999999876                589999999988887  589999999842  


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                           +++..+.+|+.++.+++++|.+.|+ ++||+||..+.             ..|.+.|+++|..+|+.+++...++
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~  143 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNA  143 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSE
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCE
Confidence                 4556778999999999999999998 99999997542             2345679999999999999877799


Q ss_pred             EEEecCccccccccc----chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc---CCcEEEEcCCCCCCHHH
Q 015872          222 VIIRLCGFMQGLIGQ----YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI---NGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~---~g~~~~l~~~~~~s~~e  294 (399)
                      .|+|++++|+..-.+    +...+..+..+.... +...++++++|+|+++..++++...   ..++||+++++.+|..|
T Consensus       144 ~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~-d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e  222 (286)
T PF04321_consen  144 LILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD-DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYE  222 (286)
T ss_dssp             EEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES-SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHH
T ss_pred             EEEecceecccCCCchhhhHHHHHhcCCeeEeeC-CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHH
Confidence            999999999763222    333344444444433 5566999999999999999987432   35799999999999999


Q ss_pred             HHHHHHHHhCCCC-CeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHH
Q 015872          295 VITLCERLAGQDA-NVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKY  373 (399)
Q Consensus       295 ~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~  373 (399)
                      +++.+.+.+|.+. .+.+++.....                      ....+......+++++++.||+++.   +++++
T Consensus       223 ~~~~i~~~~~~~~~~i~~~~~~~~~----------------------~~~~rp~~~~L~~~kl~~~~g~~~~---~~~~~  277 (286)
T PF04321_consen  223 FAEAIAKILGLDPELIKPVSSSEFP----------------------RAAPRPRNTSLDCRKLKNLLGIKPP---PWREG  277 (286)
T ss_dssp             HHHHHHHHHTHCTTEEEEESSTTST----------------------TSSGS-SBE-B--HHHHHCTTS------BHHHH
T ss_pred             HHHHHHHHhCCCCceEEecccccCC----------------------CCCCCCCcccccHHHHHHccCCCCc---CHHHH
Confidence            9999999999876 55555433210                      1112334455788999999999988   89999


Q ss_pred             HHHHHHHH
Q 015872          374 LQDYFTNI  381 (399)
Q Consensus       374 l~~~~~~~  381 (399)
                      |+++++.+
T Consensus       278 l~~~~~~~  285 (286)
T PF04321_consen  278 LEELVKQY  285 (286)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998876

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=266.12  Aligned_cols=297  Identities=18%  Similarity=0.225  Sum_probs=210.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHH--HCCCcEEEEecCCCCCc-ccc----ccCCcEEEEccCCCCC------cHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRAL--DEGYDVRCLVRPRPAPA-DFL----RDWGATVVNADLSKPE------TIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~--~~g~~V~~~~r~~~~~~-~~l----~~~~v~~~~~Dl~d~~------~l~~~~~~~d  150 (399)
                      |+|||||||||||++|++.|+  +.|++|++++|+..... ..+    ...+++++.+|++|++      .+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            479999999999999999999  57999999999632210 001    1136899999999853      34444 8999


Q ss_pred             EEEECCCCC----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC---------------CCCCcHHHHHHHHH
Q 015872          151 TVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---------------HPEVPLMEIKYCTE  211 (399)
Q Consensus       151 ~Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~---------------~~~~~y~~~K~~~E  211 (399)
                      +|||||+..    ......++|+.++.+++++|++.++++|||+||.+++.               .+..+|+.+|..+|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            999999832    23445678999999999999999999999999986632               12357999999999


Q ss_pred             HHHH-hCCCCEEEEecCccccccccc-------------chhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          212 QFLQ-DSGLPHVIIRLCGFMQGLIGQ-------------YAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       212 ~~l~-~~g~~~~ilRp~~~~~~~~~~-------------~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      ++++ ..+++++++||+.+||.....             .+..+....   .+++ .+....+++|++|+++++..+++.
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~vddva~ai~~~~~~  238 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVG-PDGGRTNIVPVDYVADALDHLMHK  238 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccccccc-CCCCeeeeeeHHHHHHHHHHHhcC
Confidence            9997 478999999999999742110             111111101   1222 234456999999999999999987


Q ss_pred             CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCC---CeeecCHHHHHHHHHHhhhhhhhh-hhhhhhh----hhhhhccC
Q 015872          275 EKINGRTLTFSGPRAWTTQEVITLCERLAGQDA---NVTMVPVSVLRFTRQLTRFFEWTN-DVADRLA----FSEVLTSD  346 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~  346 (399)
                      +...|++||+++++.+|+.|+++.+.+.+|.+.   .+..+|.+................ .....+.    ....+...
T Consensus       239 ~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  318 (657)
T PRK07201        239 DGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYP  318 (657)
T ss_pred             cCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCC
Confidence            666789999999999999999999999999887   667778776555443211110000 0000000    11222233


Q ss_pred             cccccccccccccc---CCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          347 TVFSVPMSETFDLL---GVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       347 ~~~~~~~~~~~~~L---G~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ..  .|.+++++.|   |+...   .+++++..+++++.+.+..
T Consensus       319 ~~--f~~~~~~~~L~~~~~~~p---~~~~~~~~~~~~~~~~~~~  357 (657)
T PRK07201        319 TT--FDSRETRAALKGSGIEVP---RLASYAPRLWDYWERHLDP  357 (657)
T ss_pred             Ce--eccHHHHHHhccCCcCCC---ChHHHHHHHHHHHHhcCCh
Confidence            33  4567888888   66555   7889999999988777544

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=3.8e-29  Score=224.63  Aligned_cols=252  Identities=19%  Similarity=0.218  Sum_probs=199.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC----
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT----  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~----  157 (399)
                      |+|||||++|++|+.|++.|. .+++|+.++|..                .|++|++.+.+++.  .+|+|||+|+    
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            349999999999999999999 779999999972                89999999999997  5799999998    


Q ss_pred             ---CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          158 ---GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       158 ---~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~-------------~~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                         +.+++..+.+|..++.+++++|.+.|. ++||+||..+             ...|.+.||++|..+|+.+++.+.+.
T Consensus        64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~  142 (281)
T COG1091          64 DKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRH  142 (281)
T ss_pred             ccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCE
Confidence               233455667999999999999999998 8999998644             13456779999999999999999999


Q ss_pred             EEEecCcccccccccchhhhc----cccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHH
Q 015872          222 VIIRLCGFMQGLIGQYAVPIL----EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                      +|+|.+|+|+..-++|...++    ++..+.... ++..+++++.|+|+++..++..... +.+||+++....|+.|+++
T Consensus       143 ~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~-Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~Swydfa~  220 (281)
T COG1091         143 LILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD-DQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECSWYEFAK  220 (281)
T ss_pred             EEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC-CeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCcccHHHHHH
Confidence            999999999765455543333    343555444 5555899999999999999988754 3499999988899999999


Q ss_pred             HHHHHhCCCCCee-ecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHH
Q 015872          298 LCERLAGQDANVT-MVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQD  376 (399)
Q Consensus       298 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~  376 (399)
                      .+.+..|.+..+. .++...                      +.....++..-+.++.++++.+|++|.   +.++.+++
T Consensus       221 ~I~~~~~~~~~v~~~~~~~~----------------------~~~~a~RP~~S~L~~~k~~~~~g~~~~---~w~~~l~~  275 (281)
T COG1091         221 AIFEEAGVDGEVIEPIASAE----------------------YPTPAKRPANSSLDTKKLEKAFGLSLP---EWREALKA  275 (281)
T ss_pred             HHHHHhCCCccccccccccc----------------------cCccCCCCcccccchHHHHHHhCCCCc---cHHHHHHH
Confidence            9999999766443 222210                      001111222333678899999999887   88999988


Q ss_pred             HHHH
Q 015872          377 YFTN  380 (399)
Q Consensus       377 ~~~~  380 (399)
                      +++.
T Consensus       276 ~~~~  279 (281)
T COG1091         276 LLDE  279 (281)
T ss_pred             HHhh
Confidence            8764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.96  E-value=2.2e-28  Score=221.12  Aligned_cols=219  Identities=33%  Similarity=0.497  Sum_probs=173.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-CccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCcc
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI  164 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~  164 (399)
                      |+|+||||.+|+++++.|++.|++|++++|+..+ ..+.++..+++++.+|+.|+++|.++|+|+|+||++.+....   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~---   77 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHP---   77 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCC---
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchh---
Confidence            7999999999999999999999999999998633 345566779999999999999999999999999999875432   


Q ss_pred             hhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-----CCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchh
Q 015872          165 KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----HPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAV  239 (399)
Q Consensus       165 ~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-----~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~  239 (399)
                        .......++++||+++||++||+.|......     .|..++...|..+|+++++.+++|+++|||.++++++..+..
T Consensus        78 --~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~  155 (233)
T PF05368_consen   78 --SELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAP  155 (233)
T ss_dssp             --CHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHH
T ss_pred             --hhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcc
Confidence              3346788999999999999999766554442     233557789999999999999999999999999988765443


Q ss_pred             h--hcccc--ccccCCCCcceece-eHHHHHHHHHHHHhCCcc--CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCee
Q 015872          240 P--ILEEK--SVWGTDALTRIAYM-DTQDIARLTFVALRNEKI--NGRTLTFSGPRAWTTQEVITLCERLAGQDANVT  310 (399)
Q Consensus       240 ~--~~~~~--~~~~~~~~~~~~~v-~v~Dva~~i~~~l~~~~~--~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~  310 (399)
                      .  .....  ..+..+++.+..++ +.+|+|++++.++.++..  .++.+.+++ +.+|++|+++++.+.+|++++|+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  156 VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKYV  232 (233)
T ss_dssp             TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEEE
T ss_pred             cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEEe
Confidence            2  22221  23334445555664 999999999999999754  367888877 67999999999999999988765

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.96  E-value=2.3e-27  Score=228.50  Aligned_cols=235  Identities=18%  Similarity=0.233  Sum_probs=177.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc--ccc--------------ccCCcEEEEccCCCC------C
Q 015872           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA--DFL--------------RDWGATVVNADLSKP------E  140 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~--~~l--------------~~~~v~~~~~Dl~d~------~  140 (399)
                      +|+|||||||||++++++|+++|  ++|++++|+.....  +.+              ...+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  67999999754210  000              003689999999865      3


Q ss_pred             cHHHHhcCCCEEEECCCCC----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------------------
Q 015872          141 TIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------------  198 (399)
Q Consensus       141 ~l~~~~~~~d~Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------------------  198 (399)
                      .+..+.+++|+|||+|+..    +...+.+.|+.++.+++++|.+.++++||++||.+++..                  
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            4566677899999999832    334455799999999999999999999999999876432                  


Q ss_pred             CCCcHHHHHHHHHHHHHh---CCCCEEEEecCcccccccc------cchhhhccc---cccccCCCCcceeceeHHHHHH
Q 015872          199 PEVPLMEIKYCTEQFLQD---SGLPHVIIRLCGFMQGLIG------QYAVPILEE---KSVWGTDALTRIAYMDTQDIAR  266 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~~---~g~~~~ilRp~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~v~v~Dva~  266 (399)
                      +..+|+.+|..+|.++++   .|++++++||+.+++....      .++..++..   ...++.......++++++|+++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVAR  240 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHH
Confidence            124699999999998854   4999999999999974211      112122111   1123333334568999999999


Q ss_pred             HHHHHHhCCcc--CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHH
Q 015872          267 LTFVALRNEKI--NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFT  320 (399)
Q Consensus       267 ~i~~~l~~~~~--~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~  320 (399)
                      +++.++.++..  .+++||+++++.++++|+++.+.+ +|.+.+....+.+.....
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~  295 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLE  295 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHH
Confidence            99999987653  278999999999999999999999 898887666666655443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=2.9e-27  Score=220.91  Aligned_cols=260  Identities=21%  Similarity=0.199  Sum_probs=175.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC----C
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP----E  161 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~----~  161 (399)
                      ||||||+||||+++++.|+++|++|++++|+..+... +....    ..|+.+ +.+...+.++|+|||+|+...    .
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN-TKWEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc-cccee----eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            6899999999999999999999999999998654322 11111    123322 456677889999999998421    1


Q ss_pred             -----CcchhccHHHHHHHHHHHHHcCCc--EEEEecccCCCCC-------------CCCcHHHHHHHHHHHH---HhCC
Q 015872          162 -----EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFL---QDSG  218 (399)
Q Consensus       162 -----~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l---~~~g  218 (399)
                           ..+.++|+.++.+++++|++.+++  +||+.|+.+++..             +...|...+...|..+   ++.+
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~  154 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLG  154 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcC
Confidence                 234568999999999999999874  5666666432210             1113455555566554   4468


Q ss_pred             CCEEEEecCccccccc---ccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHH
Q 015872          219 LPHVIIRLCGFMQGLI---GQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       219 ~~~~ilRp~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~  293 (399)
                      ++++++||+.+||...   ..+..  ....+. .++ +++..++++|++|+|+++..+++++.. +++||+++++.+|+.
T Consensus       155 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~~~s~~  231 (292)
T TIGR01777       155 TRVVLLRTGIVLGPKGGALAKMLPPFRLGLGG-PLG-SGRQWFSWIHIEDLVQLILFALENASI-SGPVNATAPEPVRNK  231 (292)
T ss_pred             CceEEEeeeeEECCCcchhHHHHHHHhcCccc-ccC-CCCcccccEeHHHHHHHHHHHhcCccc-CCceEecCCCccCHH
Confidence            9999999999997532   11111  111111 122 346667999999999999999987654 469999999999999


Q ss_pred             HHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHH
Q 015872          294 EVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKY  373 (399)
Q Consensus       294 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~  373 (399)
                      |+++.+++.+|.+.. ..+|.+..+......     +.         . +..+.  ..+.++++ .|||+|+. .+++|+
T Consensus       232 di~~~i~~~~g~~~~-~~~p~~~~~~~~~~~-----~~---------~-~~~~~--~~~~~~~~-~~g~~~~~-~~~~~~  291 (292)
T TIGR01777       232 EFAKALARALHRPAF-FPVPAFVLRALLGEM-----AD---------L-LLKGQ--RVLPEKLL-EAGFQFQY-PDLDEA  291 (292)
T ss_pred             HHHHHHHHHhCCCCc-CcCCHHHHHHHhchh-----hH---------H-HhCCc--ccccHHHH-hcCCeeeC-cChhhc
Confidence            999999999998754 457776544321000     00         0 11111  14557775 59999983 257776


Q ss_pred             H
Q 015872          374 L  374 (399)
Q Consensus       374 l  374 (399)
                      |
T Consensus       292 ~  292 (292)
T TIGR01777       292 L  292 (292)
T ss_pred             C
Confidence            4

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.96  E-value=2e-27  Score=222.54  Aligned_cols=217  Identities=19%  Similarity=0.203  Sum_probs=166.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-----cccc--cCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-----DFLR--DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-----~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .++|+||||+||||++++++|+++||+|++++|+..+..     ..+.  ..+++++++|++|.+++.+++.++|.|+|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~   85 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC   85 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            468999999999999999999999999999999632211     1111  125788999999999999999999999998


Q ss_pred             CCCCC-----CCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCC--C-C------------C---------CCcHHH
Q 015872          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD--K-H------------P---------EVPLME  205 (399)
Q Consensus       156 a~~~~-----~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~--~-~------------~---------~~~y~~  205 (399)
                      ++...     ...++++|+.++.+++++|.+. ++++||++||.++.  . .            +         ...|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  165 (297)
T PLN02583         86 FDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHAL  165 (297)
T ss_pred             CccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHH
Confidence            76321     2345789999999999999886 68999999996431  1 0            0         016999


Q ss_pred             HHHHHHHHHH----hCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          206 IKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       206 ~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                      +|..+|+++.    +.|++++++||+++||...... ...+.+. ..++   ...++|||++|+|++++.+++++...+ 
T Consensus       166 sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~-~~~~~~~~~~~~---~~~~~~v~V~Dva~a~~~al~~~~~~~-  240 (297)
T PLN02583        166 AKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH-NPYLKGAAQMYE---NGVLVTVDVNFLVDAHIRAFEDVSSYG-  240 (297)
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc-hhhhcCCcccCc---ccCcceEEHHHHHHHHHHHhcCcccCC-
Confidence            9999999873    4699999999999998654321 1222222 2222   234589999999999999999876555 


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                      .|+++++......++++++.+..+
T Consensus       241 r~~~~~~~~~~~~~~~~~~~~~~p  264 (297)
T PLN02583        241 RYLCFNHIVNTEEDAVKLAQMLSP  264 (297)
T ss_pred             cEEEecCCCccHHHHHHHHHHhCC
Confidence            799988765567889999999865

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.95  E-value=3.8e-28  Score=219.62  Aligned_cols=200  Identities=25%  Similarity=0.324  Sum_probs=163.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCC--CEEEECCCCC----
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV--HTVIDCATGR----  159 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~--d~Vi~~a~~~----  159 (399)
                      |||||||||||++++++|+++|++|+.+.|+..+........+++++.+|+.|.+.+.+++++.  |+|||+|+..    
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7999999999999999999999999999998655433233338999999999999999999854  9999999953    


Q ss_pred             ---CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------CCCcHHHHHHHHHHHHH----hCCC
Q 015872          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFLQ----DSGL  219 (399)
Q Consensus       160 ---~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~----~~g~  219 (399)
                         ....+.+.|+.++.+++++|.+.++++||++||..++..             +.++|+.+|...|++++    +.++
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~  160 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL  160 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               334556789999999999999999999999999865432             34679999999999884    3589


Q ss_pred             CEEEEecCcccccc----c-----ccchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          220 PHVIIRLCGFMQGL----I-----GQYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       220 ~~~ilRp~~~~~~~----~-----~~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      +++++||+.+||..    .     ..++..+..+.++ ....++..++++|++|+|++++.+++++...+++|||+
T Consensus       161 ~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  161 RVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             EEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999766    1     1234455556532 22344667799999999999999999988678999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=6.2e-27  Score=232.17  Aligned_cols=225  Identities=17%  Similarity=0.143  Sum_probs=169.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCcc--ccc------------------------cCCcEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPAD--FLR------------------------DWGATVV  132 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~--~l~------------------------~~~v~~~  132 (399)
                      ..|+|||||||||+|++|++.|++.+   .+|+++.|.......  .+.                        ..+++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            45789999999999999999999865   368999997542110  000                        1468999


Q ss_pred             EccCCCC-------CcHHHHhcCCCEEEECCCCC----CCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCCC--
Q 015872          133 NADLSKP-------ETIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDKH--  198 (399)
Q Consensus       133 ~~Dl~d~-------~~l~~~~~~~d~Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~~--  198 (399)
                      .||++++       +.+..+++++|+|||+|+..    ++....++|+.|+.+++++|+++ ++++||++||..++..  
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~  169 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS  169 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence            9999843       34667788999999999832    33455679999999999999986 6899999999754311  


Q ss_pred             --------------------------------------------------------------CCCcHHHHHHHHHHHHHh
Q 015872          199 --------------------------------------------------------------PEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       199 --------------------------------------------------------------~~~~y~~~K~~~E~~l~~  216 (399)
                                                                                    ..+.|+.+|..+|+++++
T Consensus       170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~  249 (491)
T PLN02996        170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN  249 (491)
T ss_pred             ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence                                                                          124599999999999966


Q ss_pred             --CCCCEEEEecCccccccccc---ch----------hhhccccc-cccCCCCcceeceeHHHHHHHHHHHHhCC--c-c
Q 015872          217 --SGLPHVIIRLCGFMQGLIGQ---YA----------VPILEEKS-VWGTDALTRIAYMDTQDIARLTFVALRNE--K-I  277 (399)
Q Consensus       217 --~g~~~~ilRp~~~~~~~~~~---~~----------~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~-~  277 (399)
                        .+++++++||+++++..-..   ++          ..+..+.. .+..++++.++++||+|++++++.++...  . .
T Consensus       250 ~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~  329 (491)
T PLN02996        250 FKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQG  329 (491)
T ss_pred             hcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCC
Confidence              58999999999999743211   11          11223332 23334566779999999999999998763  2 2


Q ss_pred             CCcEEEEcCC--CCCCHHHHHHHHHHHhCCC
Q 015872          278 NGRTLTFSGP--RAWTTQEVITLCERLAGQD  306 (399)
Q Consensus       278 ~g~~~~l~~~--~~~s~~e~~~~~~~~~g~~  306 (399)
                      .+++||++++  .++|+.|+++.+.+..+..
T Consensus       330 ~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        330 SEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             CCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            4679999988  7899999999999987753

>PLN02778 3,5-epimerase/4-reductase

Probab=99.95  E-value=1.2e-25  Score=210.22  Aligned_cols=252  Identities=10%  Similarity=0.090  Sum_probs=172.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      .|+||||||+||||++|++.|+++|++|+...                   +|+.|.+.+...++  ++|+|||+|+...
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~   69 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVTG   69 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            47899999999999999999999999987532                   33444455555555  6899999998431


Q ss_pred             ----------CCcchhccHHHHHHHHHHHHHcCCcEEEEeccc-CCC--------------C----CCCCcHHHHHHHHH
Q 015872          161 ----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH-NCD--------------K----HPEVPLMEIKYCTE  211 (399)
Q Consensus       161 ----------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~-~~~--------------~----~~~~~y~~~K~~~E  211 (399)
                                +..+.++|+.++.+++++|++.+++++++.|+. ..+              .    .+.++|+.+|..+|
T Consensus        70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E  149 (298)
T PLN02778         70 RPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVE  149 (298)
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHH
Confidence                      123457999999999999999999765554432 110              0    12368999999999


Q ss_pred             HHHHhCCCCEEEEecCcccccc---cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC
Q 015872          212 QFLQDSGLPHVIIRLCGFMQGL---IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR  288 (399)
Q Consensus       212 ~~l~~~g~~~~ilRp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~  288 (399)
                      .+++.+. +..++|+...++..   ...++..++.+..+...+    .+++|++|++++++.+++++.  +++||+++++
T Consensus       150 ~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~----~s~~yv~D~v~al~~~l~~~~--~g~yNigs~~  222 (298)
T PLN02778        150 ELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP----NSMTILDELLPISIEMAKRNL--TGIYNFTNPG  222 (298)
T ss_pred             HHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC----CCCEEHHHHHHHHHHHHhCCC--CCeEEeCCCC
Confidence            9998753 67788887655421   123555555554332211    269999999999999997653  3599999999


Q ss_pred             CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc
Q 015872          289 AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII  368 (399)
Q Consensus       289 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~  368 (399)
                      .+|+.|+++++++++|.+.++..+......   ..                  ..........|++|+++.++-.+.   
T Consensus       223 ~iS~~el~~~i~~~~~~~~~~~~~~i~~~~---~~------------------~~~~~~~~~Ld~~k~~~~~~~~~~---  278 (298)
T PLN02778        223 VVSHNEILEMYRDYIDPSFTWKNFTLEEQA---KV------------------IVAPRSNNELDTTKLKREFPELLP---  278 (298)
T ss_pred             cccHHHHHHHHHHHhCCCceeccccHHHHH---HH------------------HhCCCccccccHHHHHHhcccccc---
Confidence            999999999999999965433322221000   00                  000011113677888888765444   


Q ss_pred             cHHHHHHHHHHHHHHh
Q 015872          369 TLEKYLQDYFTNILKK  384 (399)
Q Consensus       369 ~lee~l~~~~~~~~~~  384 (399)
                      ..++.++..++.+++.
T Consensus       279 ~~~~~~~~~~~~~~~~  294 (298)
T PLN02778        279 IKESLIKYVFEPNKKT  294 (298)
T ss_pred             hHHHHHHHHHHHHHhh
Confidence            5677777777766443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=2.2e-26  Score=200.04  Aligned_cols=172  Identities=28%  Similarity=0.428  Sum_probs=146.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCcch
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK  165 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~  165 (399)
                      |+|+||||++|+.++++|+++|++|++++|++.+...   ..+++++++|+.|++++.++++++|+||++++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999998665443   568999999999999999999999999999985444    


Q ss_pred             hccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCC-----------cHHHHHHHHHHHHHhCCCCEEEEecCccccccc
Q 015872          166 KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV-----------PLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       166 ~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~-----------~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~  234 (399)
                        +...++++++++++++++|+|++|+.+++..+..           .|...|...|+.+++.+++|+++||+++|++..
T Consensus        74 --~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~  151 (183)
T PF13460_consen   74 --DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPS  151 (183)
T ss_dssp             --HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTS
T ss_pred             --cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCC
Confidence              2788999999999999999999999998776544           588999999999999999999999999998753


Q ss_pred             ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          235 GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .        ...+...++....++|+.+|+|++++.++++
T Consensus       152 ~--------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  152 R--------SYRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             S--------SEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             c--------ceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            2        1111211335556999999999999999875

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.94  E-value=3.6e-25  Score=202.33  Aligned_cols=213  Identities=19%  Similarity=0.268  Sum_probs=160.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCC-CcHHHHh-cCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKP-ETIPATL-VGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~-~~l~~~~-~~~d~Vi~~a~  157 (399)
                      ..+|+|+||||||+||+.++++|+++||+|++++|+..+....+. ..+++++++|++|. +.+.+.+ .++|+|||++|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g   94 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG   94 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence            345799999999999999999999999999999998554322222 23689999999984 6677778 68999999988


Q ss_pred             CC---CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC----C-CC------c---HHHHHHHHHHHHHhCCCC
Q 015872          158 GR---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH----P-EV------P---LMEIKYCTEQFLQDSGLP  220 (399)
Q Consensus       158 ~~---~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~----~-~~------~---y~~~K~~~E~~l~~~g~~  220 (399)
                      ..   ......++|..++.++++++++.++++||++||.+++..    + ..      +   |...|..+|+++++.|++
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~  174 (251)
T PLN00141         95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGIN  174 (251)
T ss_pred             CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            42   222334688999999999999999999999999875431    1 11      1   234688899999999999


Q ss_pred             EEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC---CCCCCHHHHHH
Q 015872          221 HVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG---PRAWTTQEVIT  297 (399)
Q Consensus       221 ~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~---~~~~s~~e~~~  297 (399)
                      ++++||++++++....        ......+.....++++.+|+|++++.++.++...+.++.+.+   +...++++++.
T Consensus       175 ~~iirpg~~~~~~~~~--------~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (251)
T PLN00141        175 YTIVRPGGLTNDPPTG--------NIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFA  246 (251)
T ss_pred             EEEEECCCccCCCCCc--------eEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHH
Confidence            9999999998653211        101111111223689999999999999998776678888886   22478888888


Q ss_pred             HHHH
Q 015872          298 LCER  301 (399)
Q Consensus       298 ~~~~  301 (399)
                      .+++
T Consensus       247 ~~~~  250 (251)
T PLN00141        247 SIKQ  250 (251)
T ss_pred             Hhhc
Confidence            7754

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=1.9e-26  Score=208.42  Aligned_cols=218  Identities=19%  Similarity=0.225  Sum_probs=168.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc---cc----ccCCcE----EEEccCCCCCcHHHHhc--CCCE
Q 015872           86 ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD---FL----RDWGAT----VVNADLSKPETIPATLV--GVHT  151 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~---~l----~~~~v~----~~~~Dl~d~~~l~~~~~--~~d~  151 (399)
                      ||||||+|.||+.|+++|++.+ .+|++++|+..+...   .+    ...++.    .+.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 689999998443221   12    122343    45899999999999999  8999


Q ss_pred             EEECCC-------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHh-------C
Q 015872          152 VIDCAT-------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD-------S  217 (399)
Q Consensus       152 Vi~~a~-------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~-------~  217 (399)
                      |||+|+       ...+.+..++|+.||.|++++|.++++++||++||.-+.. |.+.||.+|+.+|.++..       .
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~-PtnvmGatKrlaE~l~~~~~~~~~~~  159 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN-PTNVMGATKRLAEKLVQAANQYSGNS  159 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS---SHHHHHHHHHHHHHHHHCCTSSSS
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC-CCcHHHHHHHHHHHHHHHHhhhCCCC
Confidence            999999       4556667789999999999999999999999999987644 789999999999999854       2


Q ss_pred             CCCEEEEecCcccc---cccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          218 GLPHVIIRLCGFMQ---GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       218 g~~~~ilRp~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      +..++++|.|+|.+   ..++.|..++..++++...+++..+-|+.+++.++.++.+..... .|++|.+--++++++.|
T Consensus       160 ~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~-~geifvl~mg~~v~I~d  238 (293)
T PF02719_consen  160 DTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK-GGEIFVLDMGEPVKILD  238 (293)
T ss_dssp             --EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE---TCEECCC
T ss_pred             CcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC-CCcEEEecCCCCcCHHH
Confidence            46789999999994   566778888889998888777777789999999999999998764 57899999988999999


Q ss_pred             HHHHHHHHhCC
Q 015872          295 VITLCERLAGQ  305 (399)
Q Consensus       295 ~~~~~~~~~g~  305 (399)
                      +++.+.+..|.
T Consensus       239 lA~~~i~~~g~  249 (293)
T PF02719_consen  239 LAEAMIELSGL  249 (293)
T ss_dssp             HHHHHHHHTT-
T ss_pred             HHHHHHhhccc
Confidence            99999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=5.9e-25  Score=221.98  Aligned_cols=198  Identities=20%  Similarity=0.256  Sum_probs=154.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |+||||||+||||++|+++|+++||+|++++|.....    ...+++++++|++|+. +.+++.++|+|||+|+..... 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~-   74 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSA-   74 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccc-
Confidence            4799999999999999999999999999999864321    2246889999999984 778888999999999854322 


Q ss_pred             chhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCccccccccc----chh
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ----YAV  239 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~----~~~  239 (399)
                      ...+|+.++.+++++|++.|+ ++||+||...  .+ ..|.    ..|+++.+.+++++++|++++||.....    ++.
T Consensus        75 ~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G--~~-~~~~----~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~  146 (699)
T PRK12320         75 PGGVGITGLAHVANAAARAGA-RLLFVSQAAG--RP-ELYR----QAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVA  146 (699)
T ss_pred             hhhHHHHHHHHHHHHHHHcCC-eEEEEECCCC--CC-cccc----HHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHH
Confidence            235899999999999999998 7999998642  11 1232    5788888888999999999999853221    122


Q ss_pred             hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHH
Q 015872          240 PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      .++...     .....+.++|++|++++++.+++.+.  +++|||++++.+|+.|+++++...
T Consensus       147 ~~l~~~-----~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        147 TLLRSK-----VSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             HHHHHH-----HcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHHHHHHHh
Confidence            222110     11334567999999999999998643  349999999999999999999766

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=9.4e-25  Score=191.22  Aligned_cols=275  Identities=16%  Similarity=0.189  Sum_probs=199.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cc--------ccccCCcEEEEccCCCCCcHHHHhc--CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD--------FLRDWGATVVNADLSKPETIPATLV--GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~--------~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~  151 (399)
                      +|+.||||-||+-|++|++.|+++||+|+++.|..... ..        .+....+.++.||++|...+..+++  .+|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            57899999999999999999999999999999963321 11        1122347899999999999999997  5899


Q ss_pred             EEECCCC-------CCCCcchhccHHHHHHHHHHHHHcCC--cEEEEecccCC-------------CCCCCCcHHHHHHH
Q 015872          152 VIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNC-------------DKHPEVPLMEIKYC  209 (399)
Q Consensus       152 Vi~~a~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~-------------~~~~~~~y~~~K~~  209 (399)
                      |+|+|+.       ..+....+++-.|+.+|+++.+..+.  -||.+.||...             +-.|.+||+.+|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            9999982       23445557888999999999998874  28888887532             34578999999998


Q ss_pred             HHHHH----HhCCCCEEEEecCcccc---------cccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          210 TEQFL----QDSGLPHVIIRLCGFMQ---------GLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       210 ~E~~l----~~~g~~~~ilRp~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +--..    ..+|+-.+.=...+--+         .-+...+..+..|.  .++.++-+.+.+|-|..|.++++...+++
T Consensus       162 a~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq  241 (345)
T COG1089         162 AYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ  241 (345)
T ss_pred             HHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHcc
Confidence            85433    34555433211111111         11112222333333  56666678888999999999999999998


Q ss_pred             CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCee------------------ecCHHHHHHHHHHhhhhhhhhhhhhh
Q 015872          275 EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVT------------------MVPVSVLRFTRQLTRFFEWTNDVADR  336 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (399)
                      +.  +..|.++.++..|++|++++..+.+|.+.+++                  .+.+..++           |.++.- 
T Consensus       242 ~~--PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fR-----------PaEV~~-  307 (345)
T COG1089         242 EE--PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFR-----------PAEVDL-  307 (345)
T ss_pred             CC--CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccC-----------chhhhh-
Confidence            76  47899999999999999999999999776653                  12221111           111111 


Q ss_pred             hhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          337 LAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                                  .-.|++|+++.|||+|+  ++|+|.+++++++..+..
T Consensus       308 ------------Llgdp~KA~~~LGW~~~--~~~~elv~~Mv~~dl~~~  342 (345)
T COG1089         308 ------------LLGDPTKAKEKLGWRPE--VSLEELVREMVEADLEAA  342 (345)
T ss_pred             ------------hcCCHHHHHHHcCCccc--cCHHHHHHHHHHHHHHHh
Confidence                        12578999999999999  899999999999876543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=1.4e-24  Score=183.70  Aligned_cols=258  Identities=19%  Similarity=0.215  Sum_probs=190.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc--EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD--VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT-  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~--V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~-  157 (399)
                      +++|||||++|.+|++|++.+.+.|.+  =.++.-+               -.+||++.++.++.|+  ++..|||+|+ 
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCCceeeehHhh
Confidence            378999999999999999999998862  1111111               1489999999999996  6899999997 


Q ss_pred             -------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC------------------CCCCCCcHHHHHHHHH-
Q 015872          158 -------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------------DKHPEVPLMEIKYCTE-  211 (399)
Q Consensus       158 -------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~------------------~~~~~~~y~~~K~~~E-  211 (399)
                             ...+.+|+.+|+....|++..|-++|++++|+..|..+                  ..+....|..+|+.+. 
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence                   23467888999999999999999999998886655432                  1222345888896664 


Q ss_pred             ---HHHHhCCCCEEEEecCcccccccc-----cchhhhc--------ccc----ccccCCCCcceeceeHHHHHHHHHHH
Q 015872          212 ---QFLQDSGLPHVIIRLCGFMQGLIG-----QYAVPIL--------EEK----SVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       212 ---~~l~~~g~~~~ilRp~~~~~~~~~-----~~~~~~~--------~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                         .|-.++|..++.+-|+++||+.-+     ..+.+.+        ..+    .+||.|...| +|+|.+|+|++++.+
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlR-qFiys~DLA~l~i~v  224 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLR-QFIYSDDLADLFIWV  224 (315)
T ss_pred             HHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHH-HHhhHhHHHHHHHHH
Confidence               455789999999999999963221     1122211        111    5788876666 999999999999999


Q ss_pred             HhCCccCCcEEEEcCCC--CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccc
Q 015872          272 LRNEKINGRTLTFSGPR--AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVF  349 (399)
Q Consensus       272 l~~~~~~g~~~~l~~~~--~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (399)
                      +.+=. .-+-.+++.++  .+|++|+++++.+++|...+...-...                             .|+.+
T Consensus       225 lr~Y~-~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK-----------------------------~DGq~  274 (315)
T KOG1431|consen  225 LREYE-GVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK-----------------------------SDGQF  274 (315)
T ss_pred             HHhhc-CccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC-----------------------------CCCCc
Confidence            98722 12456777766  799999999999999988777653211                             12222


Q ss_pred             --cccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHH
Q 015872          350 --SVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDL  388 (399)
Q Consensus       350 --~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~  388 (399)
                        .++++|++ -|+|.|+ |++|++++.++++||.+++...
T Consensus       275 kKtasnsKL~-sl~pd~~-ft~l~~ai~~t~~Wy~~Ny~qa  313 (315)
T KOG1431|consen  275 KKTASNSKLR-SLLPDFK-FTPLEQAISETVQWYLDNYEQA  313 (315)
T ss_pred             ccccchHHHH-HhCCCcc-cChHHHHHHHHHHHHHHhHHhh
Confidence              15667774 4788884 5679999999999999988653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=2.7e-24  Score=211.10  Aligned_cols=216  Identities=21%  Similarity=0.284  Sum_probs=160.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--------------cCCcEEEEccCCCCCcHHHHh
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--------------DWGATVVNADLSKPETIPATL  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--------------~~~v~~~~~Dl~d~~~l~~~~  146 (399)
                      ++.++|+||||+|+||++++++|+++|++|++++|+..+......              ..+++++++|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            456789999999999999999999999999999998554322110              124789999999999999999


Q ss_pred             cCCCEEEECCCCCCC-----CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--C------CCcHHHHHHHHHHH
Q 015872          147 VGVHTVIDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--P------EVPLMEIKYCTEQF  213 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~-----~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--~------~~~y~~~K~~~E~~  213 (399)
                      .++|+|||++|....     ...+++|+.|+.+++++|++.+++|||++||.++...  +      ...|...|..+|++
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~  237 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA  237 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence            999999999984321     2335689999999999999999999999999876321  1      23467789999999


Q ss_pred             HHhCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEcCCCCCC
Q 015872          214 LQDSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFSGPRAWT  291 (399)
Q Consensus       214 l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~~~~~~s  291 (399)
                      +++.|++|++||||++++.... +.   ..+. .....+... -..+..+|||++++.++.++. ..+++|.+.++....
T Consensus       238 L~~sGIrvTIVRPG~L~tp~d~-~~---~t~~v~~~~~d~~~-gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p  312 (576)
T PLN03209        238 LIASGLPYTIVRPGGMERPTDA-YK---ETHNLTLSEEDTLF-GGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAP  312 (576)
T ss_pred             HHHcCCCEEEEECCeecCCccc-cc---cccceeeccccccC-CCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCC
Confidence            9999999999999998754211 10   0011 111111011 145888999999999998764 568899999876444


Q ss_pred             HHHHHHHHHH
Q 015872          292 TQEVITLCER  301 (399)
Q Consensus       292 ~~e~~~~~~~  301 (399)
                      ...+.+++.+
T Consensus       313 ~~~~~~~~~~  322 (576)
T PLN03209        313 LTPMEELLAK  322 (576)
T ss_pred             CCCHHHHHHh
Confidence            4455555543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=3.1e-24  Score=205.84  Aligned_cols=222  Identities=19%  Similarity=0.250  Sum_probs=189.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCc---cccc----cCCcEEEEccCCCCCcHHHHhcC--CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPA---DFLR----DWGATVVNADLSKPETIPATLVG--VH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~---~~l~----~~~v~~~~~Dl~d~~~l~~~~~~--~d  150 (399)
                      ...|+||||||+|-||+.+++++++.+ -++++++|+..+..   ..+.    .....++.||+.|.+.+..++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            346899999999999999999999987 68888899744321   1222    24678999999999999999998  99


Q ss_pred             EEEECCC-------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHh-----C-
Q 015872          151 TVIDCAT-------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD-----S-  217 (399)
Q Consensus       151 ~Vi~~a~-------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~-----~-  217 (399)
                      +|||+|+       +.++.+..++|+.||.|++++|.++|+++||.+||.-+- .|.+.||.+|+.+|.++..     . 
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV-~PtNvmGaTKr~aE~~~~a~~~~~~~  406 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV-NPTNVMGATKRLAEKLFQAANRNVSG  406 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc-CCchHhhHHHHHHHHHHHHHhhccCC
Confidence            9999998       345666678999999999999999999999999997643 4778999999999998854     2 


Q ss_pred             -CCCEEEEecCcccc---cccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHH
Q 015872          218 -GLPHVIIRLCGFMQ---GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       218 -g~~~~ilRp~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~  293 (399)
                       +-.++.+|.|++.|   ..++-|-.++.+|+++...+++.-+-|+.+.|.++.++++..... .|++|-+.-|+++++.
T Consensus       407 ~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~-gGeifvldMGepvkI~  485 (588)
T COG1086         407 TGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAK-GGEIFVLDMGEPVKII  485 (588)
T ss_pred             CCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcC-CCcEEEEcCCCCeEHH
Confidence             36789999999995   455667778888999888887777789999999999999998754 6899999999999999


Q ss_pred             HHHHHHHHHhC
Q 015872          294 EVITLCERLAG  304 (399)
Q Consensus       294 e~~~~~~~~~g  304 (399)
                      |+++.+-+..|
T Consensus       486 dLAk~mi~l~g  496 (588)
T COG1086         486 DLAKAMIELAG  496 (588)
T ss_pred             HHHHHHHHHhC
Confidence            99999999997

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.6e-23  Score=196.85  Aligned_cols=225  Identities=36%  Similarity=0.470  Sum_probs=161.0

Q ss_pred             CCCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           77 PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        77 ~~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ...+++++.|+|+||||.+|+.+++.|+++|+.|++++|+..+..+.+.    ..+...+..|...+.++..-+.     
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~  152 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK  152 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence            3445567899999999999999999999999999999999777666555    4466777777665544433332     


Q ss_pred             CCCEEEECCCCCCCC----cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--CCCCcHH------HHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE----PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--HPEVPLM------EIKYCTEQFLQ  215 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~----~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~------~~K~~~E~~l~  215 (399)
                      +..+|+.|++..+..    ..+.+++.|++|+++||+.+|++|||++|+++...  .+.+.+.      .+|..+|++++
T Consensus       153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~  232 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQ  232 (411)
T ss_pred             cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHH
Confidence            345778888755544    34569999999999999999999999999987643  3333444      78999999999


Q ss_pred             hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCC-cEEEEcCCCCCCHHH
Q 015872          216 DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKING-RTLTFSGPRAWTTQE  294 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g-~~~~l~~~~~~s~~e  294 (399)
                      ++|++++|||++.+..+........+......+...+..  ..+.-.|+|+.++.++.++...+ ++.+++.. .-....
T Consensus       233 ~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~r~~vael~~~all~~~~~~~k~~~~v~~-~~gpg~  309 (411)
T KOG1203|consen  233 DSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGA--YSISRLDVAELVAKALLNEAATFKKVVELVLK-PEGPGR  309 (411)
T ss_pred             hcCCCcEEEeccccccCCCCcceecccCccccccccccc--eeeehhhHHHHHHHHHhhhhhccceeEEeecC-CCCCCc
Confidence            999999999999998765544433343333333221111  46777999999999999877655 44444432 333344


Q ss_pred             HHHHHHHHhC
Q 015872          295 VITLCERLAG  304 (399)
Q Consensus       295 ~~~~~~~~~g  304 (399)
                      ..+.+.+...
T Consensus       310 ~~~~l~~~~~  319 (411)
T KOG1203|consen  310 PYKVLLELFP  319 (411)
T ss_pred             cHHHHHhhcc
Confidence            4444444444

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.92  E-value=2.8e-23  Score=182.37  Aligned_cols=264  Identities=21%  Similarity=0.254  Sum_probs=172.5

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCCCCCC---
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATGRPE---  161 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~~~~~---  161 (399)
                      |+||||||+||++|+..|.+.||+|++++|+..+....+ ...+.       .-+.+..... ++|+|||+||..-.   
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence            689999999999999999999999999999866543322 11111       2233444444 79999999993221   


Q ss_pred             ------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCCCC------------CCcHHHHHHHHHHHH---HhCC
Q 015872          162 ------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDKHP------------EVPLMEIKYCTEQFL---QDSG  218 (399)
Q Consensus       162 ------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~~------------~~~y~~~K~~~E~~l---~~~g  218 (399)
                            +.+.+--+..|..|.++..+..  .+.+|.-|..+.|.+.            ..........=|+..   +..|
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~g  152 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLG  152 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcC
Confidence                  2233455788999999988554  5566666655544322            111222333334332   4468


Q ss_pred             CCEEEEecCcccc---cccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          219 LPHVIIRLCGFMQ---GLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       219 ~~~~ilRp~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      .+++++|.|.|.+   +.+..+.....-+- --+| ++.+.++|||++|++++|..+++++...| .||++.|.+++..+
T Consensus       153 tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~G-sGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~PV~~~~  230 (297)
T COG1090         153 TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLG-SGRQWFSWIHIEDLVNAILFLLENEQLSG-PFNLTAPNPVRNKE  230 (297)
T ss_pred             ceEEEEEEEEEecCCCcchhhhcchhhhccCCccC-CCCceeeeeeHHHHHHHHHHHHhCcCCCC-cccccCCCcCcHHH
Confidence            9999999999984   44433322221111 1233 35777899999999999999999987654 99999999999999


Q ss_pred             HHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHH
Q 015872          295 VITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYL  374 (399)
Q Consensus       295 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l  374 (399)
                      +.+.+.++++++ .+.++|....++...-+.         .     .++.....  . +.++ ...|++-++ .+++++|
T Consensus       231 F~~al~r~l~RP-~~~~vP~~~~rl~LGe~a---------~-----~lL~gQrv--l-P~kl-~~aGF~F~y-~dl~~AL  290 (297)
T COG1090         231 FAHALGRALHRP-AILPVPSFALRLLLGEMA---------D-----LLLGGQRV--L-PKKL-EAAGFQFQY-PDLEEAL  290 (297)
T ss_pred             HHHHHHHHhCCC-ccccCcHHHHHHHhhhhH---------H-----HHhccchh--h-HHHH-HHCCCeeec-CCHHHHH
Confidence            999999999987 456788777664322100         0     11111111  1 2333 445776543 4889988


Q ss_pred             HHHHH
Q 015872          375 QDYFT  379 (399)
Q Consensus       375 ~~~~~  379 (399)
                      .+.+.
T Consensus       291 ~~il~  295 (297)
T COG1090         291 ADILK  295 (297)
T ss_pred             HHHHh
Confidence            87654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=3.8e-23  Score=191.28  Aligned_cols=229  Identities=26%  Similarity=0.318  Sum_probs=183.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE-  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~-  162 (399)
                      |+||||||||++|++++++|+++||+|++++|+.+.... +. .++++..+|+.++..+..+++|+|.++++.+..... 
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~-~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~   78 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA-LA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSD   78 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHh-hc-CCcEEEEeccCCHhHHHHHhccccEEEEEeccccccc
Confidence            479999999999999999999999999999998555443 33 789999999999999999999999999998843222 


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhhc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPIL  242 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~  242 (399)
                      ...........+..+.+. .++++++++|..+........|..+|..+|+.+.+.|++++++|+..+|.+....+...+.
T Consensus        79 ~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~  157 (275)
T COG0702          79 AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAE  157 (275)
T ss_pred             chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhHHHHHH
Confidence            233333444444444444 4578999999999888888999999999999999999999999988888765544332333


Q ss_pred             cccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHH
Q 015872          243 EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS  315 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  315 (399)
                      .........+..+++++..+|++.++..++..+...+++|.+.+++.++..++++.+.+..|++..+...+..
T Consensus       158 ~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~~~~~~  230 (275)
T COG0702         158 AAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGLIPEALA  230 (275)
T ss_pred             hhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCcceeeCCcHH
Confidence            3332222223347899999999999999999887788999999999999999999999999999888554433

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.90  E-value=1.1e-22  Score=210.69  Aligned_cols=248  Identities=10%  Similarity=0.086  Sum_probs=173.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~  158 (399)
                      .+.|+||||||+||||++|++.|.++|++|..                   ..+|++|.+.+...+.  ++|+|||||+.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence            34578999999999999999999999998731                   1256778888877776  78999999983


Q ss_pred             C----------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC----------------C---CC-CCcHHHHHH
Q 015872          159 R----------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD----------------K---HP-EVPLMEIKY  208 (399)
Q Consensus       159 ~----------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~----------------~---~~-~~~y~~~K~  208 (399)
                      .          .+...+++|+.++.+|+++|++.|++ +|++||..++                .   .+ .++|+.+|.
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~  517 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA  517 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence            3          12344579999999999999999995 5556553321                0   12 267999999


Q ss_pred             HHHHHHHhCCCCEEEEecCcccccc---cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          209 CTEQFLQDSGLPHVIIRLCGFMQGL---IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       209 ~~E~~l~~~g~~~~ilRp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      .+|+++++. .++.++|+.++|+..   ..+++..++........    .....+++|++.+++.+++.+.  +++||++
T Consensus       518 ~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~v----p~~~~~~~~~~~~~~~l~~~~~--~giyni~  590 (668)
T PLN02260        518 MVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNI----PNSMTVLDELLPISIEMAKRNL--RGIWNFT  590 (668)
T ss_pred             HHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeecc----CCCceehhhHHHHHHHHHHhCC--CceEEec
Confidence            999999876 477888888888432   23455555544332111    1246677889988888887532  5799999


Q ss_pred             CCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCC
Q 015872          286 GPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAK  365 (399)
Q Consensus       286 ~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~  365 (399)
                      +++.+|+.|+++.+.+.++....+..++...... .                   ....+... ..|+.++++.+|. +.
T Consensus       591 ~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~-~-------------------~~a~rp~~-~l~~~k~~~~~~~-~~  648 (668)
T PLN02260        591 NPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAK-V-------------------IVAPRSNN-EMDASKLKKEFPE-LL  648 (668)
T ss_pred             CCCcCcHHHHHHHHHHhcCCcccccccCHHHhhh-H-------------------hhCCCccc-cccHHHHHHhCcc-cc
Confidence            9999999999999999885322233333332110 0                   00001112 4677899888888 65


Q ss_pred             ccccHHHHHHHHHHH
Q 015872          366 DIITLEKYLQDYFTN  380 (399)
Q Consensus       366 ~~~~lee~l~~~~~~  380 (399)
                         +.+|.|++++..
T Consensus       649 ---~~~~~l~~~~~~  660 (668)
T PLN02260        649 ---SIKESLIKYVFE  660 (668)
T ss_pred             ---chHHHHHHHHhh
Confidence               788999888753

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=7.4e-23  Score=204.65  Aligned_cols=224  Identities=15%  Similarity=0.173  Sum_probs=164.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCC--cccc------------------------ccCCcEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAP--ADFL------------------------RDWGATVV  132 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~--~~~l------------------------~~~~v~~~  132 (399)
                      ..++|||||||||||.+|++.|++.+.   +|++++|.....  .+.+                        ...+++++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            468999999999999999999998764   689999964321  0001                        01257889


Q ss_pred             EccCCCCC------cHHHHhcCCCEEEECCCCC----CCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCCC---
Q 015872          133 NADLSKPE------TIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKH---  198 (399)
Q Consensus       133 ~~Dl~d~~------~l~~~~~~~d~Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~---  198 (399)
                      .||+++++      .+..+.+++|+|||+|+..    +.+...++|+.|+.+++++|++.+ +++|||+||..++..   
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G  277 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG  277 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence            99999873      4555567899999999843    234556799999999999999874 789999999743100   


Q ss_pred             -------C-------------------------------------------------------------CCcHHHHHHHH
Q 015872          199 -------P-------------------------------------------------------------EVPLMEIKYCT  210 (399)
Q Consensus       199 -------~-------------------------------------------------------------~~~y~~~K~~~  210 (399)
                             +                                                             ++.|..+|..+
T Consensus       278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA  357 (605)
T PLN02503        278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG  357 (605)
T ss_pred             eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence                   0                                                             14589999999


Q ss_pred             HHHHHh--CCCCEEEEecCcccc-----------c--ccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          211 EQFLQD--SGLPHVIIRLCGFMQ-----------G--LIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       211 E~~l~~--~g~~~~ilRp~~~~~-----------~--~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      |+++++  .+++++|+||+.|..           +  ........+..|. ..+..+++...++|+||.++.+++.++..
T Consensus       358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~  437 (605)
T PLN02503        358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK  437 (605)
T ss_pred             HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence            999976  479999999998831           1  1111111111222 22445568888999999999999999532


Q ss_pred             -C---ccCCcEEEEcCC--CCCCHHHHHHHHHHHhCC
Q 015872          275 -E---KINGRTLTFSGP--RAWTTQEVITLCERLAGQ  305 (399)
Q Consensus       275 -~---~~~g~~~~l~~~--~~~s~~e~~~~~~~~~g~  305 (399)
                       .   ...+++||++++  .++++.++++.+.+....
T Consensus       438 ~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        438 HGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             hhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence             1   124689999988  789999999999876543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.88  E-value=2.9e-21  Score=215.93  Aligned_cols=234  Identities=18%  Similarity=0.206  Sum_probs=173.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC----CcEEEEecCCCCCcc--ccc-------------cCCcEEEEccCCCC----
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPAD--FLR-------------DWGATVVNADLSKP----  139 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g----~~V~~~~r~~~~~~~--~l~-------------~~~v~~~~~Dl~d~----  139 (399)
                      .++|+|||||||+|.+++++|+++|    ++|+++.|.......  .+.             ..+++++.+|+.++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999887    899999997432211  010             12688999999864    


Q ss_pred             --CcHHHHhcCCCEEEECCCCC----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC---------------
Q 015872          140 --ETIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH---------------  198 (399)
Q Consensus       140 --~~l~~~~~~~d~Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~---------------  198 (399)
                        +.+..+..++|+|||+|+..    +...+...|+.|+.+++++|.+.++++|+|+||.+++..               
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence              34556667899999999832    333444679999999999999999999999999754310               


Q ss_pred             ---------------CCCcHHHHHHHHHHHHHh---CCCCEEEEecCcccccccc------cchhhhcccc---ccccCC
Q 015872          199 ---------------PEVPLMEIKYCTEQFLQD---SGLPHVIIRLCGFMQGLIG------QYAVPILEEK---SVWGTD  251 (399)
Q Consensus       199 ---------------~~~~y~~~K~~~E~~l~~---~g~~~~ilRp~~~~~~~~~------~~~~~~~~~~---~~~~~~  251 (399)
                                     +..+|+.+|..+|.++.+   .|++++++||+.++|....      .++..++.+.   ..++..
T Consensus      1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~ 1210 (1389)
T TIGR03443      1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNI 1210 (1389)
T ss_pred             CCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCC
Confidence                           124599999999998853   5899999999999974321      1222233221   122222


Q ss_pred             CCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHH
Q 015872          252 ALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLR  318 (399)
Q Consensus       252 ~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~  318 (399)
                       ...++|++++|++++++.++.++.  ..+.+||++++..+++.++++.+.+ .|.+.+....+.+..+
T Consensus      1211 -~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~w~~~ 1277 (1389)
T TIGR03443      1211 -NNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVEIVDYVHWRKS 1277 (1389)
T ss_pred             -CCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCCccCHHHHHHH
Confidence             334699999999999999987653  2346999999888999999999976 4777776665555543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.87  E-value=2.7e-22  Score=182.91  Aligned_cols=181  Identities=22%  Similarity=0.308  Sum_probs=112.6

Q ss_pred             EEcCCChhHHHHHHHHHHCCC--cEEEEecCCCC--Ccccc----------------ccCCcEEEEccCCCCC------c
Q 015872           88 VVGATGTLGRQIVRRALDEGY--DVRCLVRPRPA--PADFL----------------RDWGATVVNADLSKPE------T  141 (399)
Q Consensus        88 VtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~--~~~~l----------------~~~~v~~~~~Dl~d~~------~  141 (399)
                      |||||||+|.+|+++|++++.  +|++++|....  ..+.+                ...+++++.||++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997532  11111                1357999999999853      4


Q ss_pred             HHHHhcCCCEEEECCC----CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC---------------------
Q 015872          142 IPATLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---------------------  196 (399)
Q Consensus       142 l~~~~~~~d~Vi~~a~----~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~---------------------  196 (399)
                      +..+.+.+|+|||||+    ..+...+.+.|+.|++++++.|.+.+.++|+|+||..+.                     
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            5556678999999999    346677889999999999999998877799999995321                     


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh----CCCCEEEEecCcccccccccc------h----hhhcccc--ccccCCCCcceece
Q 015872          197 -KHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLIGQY------A----VPILEEK--SVWGTDALTRIAYM  259 (399)
Q Consensus       197 -~~~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~~~------~----~~~~~~~--~~~~~~~~~~~~~v  259 (399)
                       ....++|..+|..+|+++++    .|++++|+|||.+++...+..      .    ......+  +......+..++++
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~v  240 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLV  240 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EE
T ss_pred             hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEE
Confidence             01235699999999999854    399999999999986322211      1    1111111  22223334568999


Q ss_pred             eHHHHHHHH
Q 015872          260 DTQDIARLT  268 (399)
Q Consensus       260 ~v~Dva~~i  268 (399)
                      +||.+|++|
T Consensus       241 PVD~va~aI  249 (249)
T PF07993_consen  241 PVDYVARAI  249 (249)
T ss_dssp             EHHHHHHHH
T ss_pred             CHHHHHhhC
Confidence            999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-21  Score=180.42  Aligned_cols=219  Identities=16%  Similarity=0.132  Sum_probs=156.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      .|+||||||+|+||++++++|+++|++|++++|+.+.......  ..++.++++|++|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999997533221111  1367889999999988877654       589999


Q ss_pred             ECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          154 DCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       154 ~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      |++|....           ....++|+.++.++++++    ++.+.++||++||.+..  ..+..+|+.+|...|.+++ 
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence            99983211           123358999999999997    55677899999997643  3356789999999997763 


Q ss_pred             ------hCCCCEEEEecCcccccccccchh----hhcccc------ccccCCCCcceeceeHHHHHHHHHHHHhCCccCC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAV----PILEEK------SVWGTDALTRIAYMDTQDIARLTFVALRNEKING  279 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g  279 (399)
                            ..|++++++|||.+..++......    ....+.      .... .+... .+.+++|++++++.++..+.. +
T Consensus       162 l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~d~~~~~~a~~~~~~~~~~-~  238 (276)
T PRK06482        162 VAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA-DGSFA-IPGDPQKMVQAMIASADQTPA-P  238 (276)
T ss_pred             HHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh-hccCC-CCCCHHHHHHHHHHHHcCCCC-C
Confidence                  258999999999874332111100    000000      0000 11111 246899999999999986543 5


Q ss_pred             cEEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          280 RTLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       280 ~~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                      ..||+++++..++.|+++.+.+.++
T Consensus       239 ~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        239 RRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             eEEecChHHHHHHHHHHHHHHHHHH
Confidence            6799999888888888887777664

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.9e-21  Score=176.09  Aligned_cols=207  Identities=17%  Similarity=0.197  Sum_probs=149.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.++++||||+|+||.++++.|+++|++|++++|+..+....    +..  .++.++++|++|++++.++++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4568899999999999999999999999999999974332111    111  246789999999998877664       


Q ss_pred             CCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC------CCC-CCcHHHHHHHHHHH
Q 015872          148 GVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD------KHP-EVPLMEIKYCTEQF  213 (399)
Q Consensus       148 ~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~------~~~-~~~y~~~K~~~E~~  213 (399)
                      ++|+|||+++..     .+....++|+.++.++++++.+.-  ..++|++||....      ..+ ..+|+.+|..+|.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~  163 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDA  163 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHH
Confidence            589999999732     234456799999999999998652  2489999985432      112 35799999999988


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      ++.       .++++++++|+.+.+.....+......+ .+ .........+++++|+|++++.+++.+...|++|++++
T Consensus       164 ~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~  241 (248)
T PRK07806        164 LRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPG-AI-EARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGG  241 (248)
T ss_pred             HHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHH-HH-HHHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecC
Confidence            743       6799999999876654332211111000 00 00000012689999999999999997766899999999


Q ss_pred             CCC
Q 015872          287 PRA  289 (399)
Q Consensus       287 ~~~  289 (399)
                      ++.
T Consensus       242 ~~~  244 (248)
T PRK07806        242 ADY  244 (248)
T ss_pred             ccc
Confidence            874

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.86  E-value=1.3e-21  Score=179.83  Aligned_cols=148  Identities=25%  Similarity=0.311  Sum_probs=121.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCc---------------cccccCCcEEEEccCCCC------Cc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPA---------------DFLRDWGATVVNADLSKP------ET  141 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~---------------~~l~~~~v~~~~~Dl~d~------~~  141 (399)
                      ++||+||||||+|.+++.+|+.+- .+|+|++|..+...               +.+-..+++++.||+..+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            469999999999999999999885 59999999754211               112234799999999854      45


Q ss_pred             HHHHhcCCCEEEECCC----CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC---------------------
Q 015872          142 IPATLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---------------------  196 (399)
Q Consensus       142 l~~~~~~~d~Vi~~a~----~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~---------------------  196 (399)
                      +.++.+.+|.|||+++    ..++..+...|+.||..+++.|...+.|.++|+||.++.                     
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            6666678999999998    457788889999999999999999999999999998652                     


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh---CCCCEEEEecCcccc
Q 015872          197 -KHPEVPLMEIKYCTEQFLQD---SGLPHVIIRLCGFMQ  231 (399)
Q Consensus       197 -~~~~~~y~~~K~~~E~~l~~---~g~~~~ilRp~~~~~  231 (399)
                       ..+..+|++||+.+|..+++   .|++++|+|||++.+
T Consensus       161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~g  199 (382)
T COG3320         161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITG  199 (382)
T ss_pred             cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeec
Confidence             12347899999999999965   689999999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=9.3e-21  Score=172.43  Aligned_cols=205  Identities=18%  Similarity=0.147  Sum_probs=149.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++|+|+||||+|++|.++++.|+++|++|+++.|+..+....+    .  ..++.++.+|+.|++++.++++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            45679999999999999999999999999988888654322111    1  2357889999999998877764       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      ++|+|||++|..+..           ...++|+.+..++++++    ++.+.++||++||.+...  .....|+.+|...
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~  163 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGL  163 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHH
Confidence            579999999833221           22457888888888877    566788999999986643  2346799999998


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+++       +.+++++++||+.++++.............  ... ... ..+++.+|+++++..++.++  ...|++
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~-~~~-~~~~~~~dva~~~~~~~~~~~~~~~g~~  239 (249)
T PRK12825        164 VGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAE-TPL-GRSGTPEDIARAVAFLCSDASDYITGQV  239 (249)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--hcc-CCC-CCCcCHHHHHHHHHHHhCccccCcCCCE
Confidence            87652       368999999999999876543322111111  001 111 14899999999999999764  346899


Q ss_pred             EEEcCCCC
Q 015872          282 LTFSGPRA  289 (399)
Q Consensus       282 ~~l~~~~~  289 (399)
                      |++.++..
T Consensus       240 ~~i~~g~~  247 (249)
T PRK12825        240 IEVTGGVD  247 (249)
T ss_pred             EEeCCCEe
Confidence            99998754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.86  E-value=6.6e-21  Score=175.12  Aligned_cols=207  Identities=12%  Similarity=0.112  Sum_probs=149.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccC--CcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~--~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++++||||||+|+||.++++.|+++|++|++++|+.++....   +...  .+.++++|++|.+.+.++++       +
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4568899999999999999999999999999999985432221   1112  36779999999988877665       4


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHH----HHHHHHHH-HHcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEG----KVALIQCA-KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~----~~~l~~aa-~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +|+|||++|....           +...++|+.+    +.++++++ ++.+.++||++||.....  .+...|+.+|...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~  164 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGL  164 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHH
Confidence            8999999984321           1123478888    66777777 677788999999975432  3346799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccc---------cccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE---------KSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.+++       ..+++++++||+.+++.............         ..++..+ .....|++++|++++++.++..
T Consensus       165 ~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~a~~~l~~~  243 (262)
T PRK13394        165 LGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGK-TVDGVFTTVEDVAQTVLFLSSF  243 (262)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcC-CCCCCCCCHHHHHHHHHHHcCc
Confidence            87763       25899999999999876543222111110         0122222 2234899999999999999976


Q ss_pred             Cc--cCCcEEEEcCCC
Q 015872          275 EK--INGRTLTFSGPR  288 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~  288 (399)
                      +.  ..|+.|++.++.
T Consensus       244 ~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        244 PSAALTGQSFVVSHGW  259 (262)
T ss_pred             cccCCcCCEEeeCCce
Confidence            43  347899998874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.86  E-value=1.1e-20  Score=173.14  Aligned_cols=205  Identities=18%  Similarity=0.146  Sum_probs=146.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ..++|+||||+|++|.+++++|+++|++|++++|+.++....   +.  ..++..+.+|++|++++.++++       ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999985543221   11  1257789999999998877765       58


Q ss_pred             CEEEECCCCCCCCc-----------chhccHHH----HHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEEP-----------IKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~~-----------~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |+|||+++......           ..++|+.+    +..+++++++.+.++||++||....  ..+..+|+.+|...+.
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~  162 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG  162 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence            99999998432211           23467777    5556666667788899999987543  3455789999998886


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccc--c-------ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE--K-------SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+       ..+++++++||+.++++............  .       ..+..... ...+++++|+|++++.++....
T Consensus       163 ~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~~~~~  241 (258)
T PRK12429        163 LTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVP-QKRFTTVEEIADYALFLASFAA  241 (258)
T ss_pred             HHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCC-ccccCCHHHHHHHHHHHcCccc
Confidence            653       25799999999999876543322211111  0       11111112 2379999999999999997643


Q ss_pred             --cCCcEEEEcCC
Q 015872          277 --INGRTLTFSGP  287 (399)
Q Consensus       277 --~~g~~~~l~~~  287 (399)
                        ..|+.|++.++
T Consensus       242 ~~~~g~~~~~~~g  254 (258)
T PRK12429        242 KGVTGQAWVVDGG  254 (258)
T ss_pred             cCccCCeEEeCCC
Confidence              35789999886

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=174.71  Aligned_cols=223  Identities=15%  Similarity=0.153  Sum_probs=158.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      +|+.++|+||||+|+||.++++.|+++|++|++++|+.++....   +.    ..++.++.+|++|++++.++++     
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35568999999999999999999999999999999975432211   11    1246788999999988877765     


Q ss_pred             --CCCEEEECCCCCC----C--------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 --GVHTVIDCATGRP----E--------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 --~~d~Vi~~a~~~~----~--------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                        ++|+|||++|...    .        ....++|+.++.++++++.+.    +..+||++||.....  .+..+|+.+|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence              6899999998321    1        122357888888888776543    345899999986643  3456899999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc--
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI--  277 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~--  277 (399)
                      ...|.+++.       .+++++++||+.+........... ...  ..+...... ..+++++|+|+++..++.++..  
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  240 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELS--ADYRACTPL-PRVGEVEDVANLAMFLLSDAASWI  240 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHH--HHHHcCCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            999988743       579999999998875543221110 000  001111111 2467899999999999987543  


Q ss_pred             CCcEEEEcCCCCC----CHHHHHHHHHHHhCC
Q 015872          278 NGRTLTFSGPRAW----TTQEVITLCERLAGQ  305 (399)
Q Consensus       278 ~g~~~~l~~~~~~----s~~e~~~~~~~~~g~  305 (399)
                      .|+++++.+++.+    ++.|+++.+.+..|.
T Consensus       241 ~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        241 TGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             CCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            4889999998776    778888777765543

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8.7e-21  Score=175.78  Aligned_cols=220  Identities=14%  Similarity=0.071  Sum_probs=156.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++......  ...+..+++|++|++++.++++       ++|+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45789999999999999999999999999999997543221111  2257788999999988776654       57999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ||++|....           ....++|+.++..+++++    ++.+.+++|++||.+...  .....|+.+|...+.+.+
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~  161 (275)
T PRK08263         82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSE  161 (275)
T ss_pred             EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHH
Confidence            999993221           223468999987776665    566778999999976532  334679999999887652


Q ss_pred             -------hCCCCEEEEecCcccccccccchhh---hccccc---cccCCCCcceec-eeHHHHHHHHHHHHhCCccCCcE
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVP---ILEEKS---VWGTDALTRIAY-MDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~-v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                             ..|++++++|||.+..+........   ......   ........ ..+ ++++|+|++++.+++.+...++.
T Consensus       162 ~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~dva~~~~~l~~~~~~~~~~  240 (275)
T PRK08263        162 ALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSE-RSVDGDPEAAAEALLKLVDAENPPLRL  240 (275)
T ss_pred             HHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHcCCCCCeEE
Confidence                   3689999999998875543211100   000000   01000011 145 88999999999999987766676


Q ss_pred             EEEcCCCCCCHHHHHHHHHHH
Q 015872          282 LTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      |+..+++.+++.++.+.+.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        241 FLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             EeCchHHHHHHHHHHHHHHHH
Confidence            666666778889988888775

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.85  E-value=1.7e-20  Score=171.69  Aligned_cols=204  Identities=14%  Similarity=0.120  Sum_probs=144.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHh-------cCCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATL-------VGVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~-------~~~d~  151 (399)
                      ++||||||+|+||+++++.|+++|++|++++|+.......   +.  ..++.++++|+.|.+++.+++       .++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5799999999999999999999999999999975432211   11  125788999999998665443       46899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+++....           +.....|+.++..+++++    ++.++++||++||....  ......|..+|...+.+.
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~  161 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLT  161 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHH
Confidence            9999984221           112346888877776666    56778899999986542  223467999999988776


Q ss_pred             Hh-------CCCCEEEEecCcccccccccchhhhccccc---------cccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          215 QD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKS---------VWGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       215 ~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      +.       .+++++++||+.++++.....+........         .+.. ......+++++|+|++++.++.++  .
T Consensus       162 ~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~~~~~~~~~  240 (255)
T TIGR01963       162 KVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLP-GQPTKRFVTVDEVAETALFLASDAAAG  240 (255)
T ss_pred             HHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHc-cCccccCcCHHHHHHHHHHHcCccccC
Confidence            42       489999999999987654332211111110         0111 223347999999999999999864  3


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+.|++.++.
T Consensus       241 ~~g~~~~~~~g~  252 (255)
T TIGR01963       241 ITGQAIVLDGGW  252 (255)
T ss_pred             ccceEEEEcCcc
Confidence            367899999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.84  E-value=3.7e-20  Score=168.94  Aligned_cols=205  Identities=19%  Similarity=0.165  Sum_probs=148.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.|+|+||||+|++|.++++.|+++|++|++++|+..+...   .+..  ..+.++.+|+.|.+++.++++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            446789999999999999999999999999999998443211   1221  247889999999998888775       6


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC---CCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~  210 (399)
                      +|+|||+++....           ....+.|+.++.++++++    ++.+.++||++||....   ......|+.+|..+
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~  163 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGL  163 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHH
Confidence            8999999984322           223457888888888877    45567799999987754   33456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+++       ..+++++++||+.++++...........  ..+....... .+++++|+|.+++.++.++.  ..|++
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~g~~  240 (251)
T PRK12826        164 VGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWA--EAIAAAIPLG-RLGEPEDIAAAVLFLASDEARYITGQT  240 (251)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCcCCcE
Confidence            87763       3589999999999987654322111100  0011110111 57899999999999887643  36899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      |++.++.
T Consensus       241 ~~~~~g~  247 (251)
T PRK12826        241 LPVDGGA  247 (251)
T ss_pred             EEECCCc
Confidence            9998875

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.6e-20  Score=168.56  Aligned_cols=216  Identities=17%  Similarity=0.141  Sum_probs=155.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .++++||||+|+||.++++.|+++|++|++++|+..+....   +...+++++++|+.|.+++..++.       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999975432211   222357889999999998877765       48999


Q ss_pred             EECCCCCCCCc--------c---hhccHHHHHHHHHHH----HHcCCcEEEEecccCCC-CCCCCcHHHHHHHHHHHHHh
Q 015872          153 IDCATGRPEEP--------I---KKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       153 i~~a~~~~~~~--------~---~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~-~~~~~~y~~~K~~~E~~l~~  216 (399)
                      ||++|......        +   ..+|+.++.++++++    ++.+..+||++||.... ......|+.+|...+.+.+.
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~~~~~  161 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHYTKL  161 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHHHHHHHHHHHH
Confidence            99998432111        1   247888887777776    44566789999986432 22345799999999877643


Q ss_pred             -------CCCCEEEEecCcccccccccchhhhcccccccc--CCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEc
Q 015872          217 -------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWG--TDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFS  285 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~  285 (399)
                             .|+++.+++||.+.+........   ....++.  ........+++++|++++++.++.+.  ...|+++++.
T Consensus       162 ~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  238 (257)
T PRK07074        162 LAVEYGRFGIRANAVAPGTVKTQAWEARVA---ANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD  238 (257)
T ss_pred             HHHHHhHhCeEEEEEEeCcCCcchhhcccc---cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeC
Confidence                   47999999999887543221100   0001100  00111237899999999999999753  3358899999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 015872          286 GPRAWTTQEVITLCER  301 (399)
Q Consensus       286 ~~~~~s~~e~~~~~~~  301 (399)
                      ++...+.+|+++.+.+
T Consensus       239 ~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        239 GGLTAGNREMARTLTL  254 (257)
T ss_pred             CCcCcCChhhhhhhcc
Confidence            9988889999988754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.83  E-value=5.5e-20  Score=167.11  Aligned_cols=206  Identities=16%  Similarity=0.125  Sum_probs=147.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .|++++|+||||+|++|.++++.|+++|++|++++|+..+...   .+.  ...+.++.+|+.|++++.++++       
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3456799999999999999999999999999999998543221   111  1247788899999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      .+|+|||++|....           ....+.|+.+..++++++.    +.++++||++||....  ..+...|..+|...
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~  161 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGV  161 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHH
Confidence            46999999984322           2234578888888887774    5677899999987542  33456799999988


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+.+       ..+++++++||+.++++................   .. ...+++.+|+++++..++...  ...|++
T Consensus       162 ~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~dva~~~~~~~~~~~~~~~g~~  237 (246)
T PRK05653        162 IGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKE---IP-LGRLGQPEEVANAVAFLASDAASYITGQV  237 (246)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            76653       358999999999988765432111111110000   01 126788999999999999763  336889


Q ss_pred             EEEcCCCC
Q 015872          282 LTFSGPRA  289 (399)
Q Consensus       282 ~~l~~~~~  289 (399)
                      |++.|+..
T Consensus       238 ~~~~gg~~  245 (246)
T PRK05653        238 IPVNGGMY  245 (246)
T ss_pred             EEeCCCee
Confidence            99998753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.8e-19  Score=163.10  Aligned_cols=198  Identities=16%  Similarity=0.108  Sum_probs=147.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ++.++||||||+|+||+++++.|+++|++|++++|+..+..+   .+...+++++.+|+.|.+++.++++       ++|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            456899999999999999999999999999999997544222   2333467889999999988877665       589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +|||+++....           ......|+.++.++++++.    +.+.++||++||.....  .+...|+.+|...+.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~  164 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL  164 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence            99999984321           1224578888888887774    45678999999987543  3346799999988776


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                      ++       +.++++.++||++++++......         .  .... ..+++++|+|+++..++.++.  ..|+.+++
T Consensus       165 ~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~---------~--~~~~-~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~  232 (239)
T PRK12828        165 TEALAAELLDRGITVNAVLPSIIDTPPNRADM---------P--DADF-SRWVTPEQIAAVIAFLLSDEAQAITGASIPV  232 (239)
T ss_pred             HHHHHHHhhhcCeEEEEEecCcccCcchhhcC---------C--chhh-hcCCCHHHHHHHHHHHhCcccccccceEEEe
Confidence            63       35899999999999876322110         0  0011 247899999999999998653  35889999


Q ss_pred             cCCCCC
Q 015872          285 SGPRAW  290 (399)
Q Consensus       285 ~~~~~~  290 (399)
                      .+++.+
T Consensus       233 ~g~~~~  238 (239)
T PRK12828        233 DGGVAL  238 (239)
T ss_pred             cCCEeC
Confidence            887643

>PRK09135 pteridine reductase; Provisional

Probab=99.83  E-value=1.5e-19  Score=164.70  Aligned_cols=207  Identities=17%  Similarity=0.157  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc---cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR---DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~---~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +.++|+||||+|+||++++++|+++|++|++++|+..+....    +.   ...+.++.+|++|.+++.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999864432211    11   1247889999999998887775       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      ++|+|||++|....           +...++|+.++.++++++...   .-..++.+++...  +..+..+|+.+|...|
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~  164 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE  164 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence            47999999983211           224468999999999998642   1236777666443  3345678999999999


Q ss_pred             HHHHh------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC-CccCCcEEEE
Q 015872          212 QFLQD------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN-EKINGRTLTF  284 (399)
Q Consensus       212 ~~l~~------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~-~~~~g~~~~l  284 (399)
                      .+++.      .+++++++||+.+++......+....... ... .... ..+.+++|+|+++..++.+ +...|++|++
T Consensus       165 ~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i  241 (249)
T PRK09135        165 MLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQA-ILA-RTPL-KRIGTPEDIAEAVRFLLADASFITGQILAV  241 (249)
T ss_pred             HHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHH-HHh-cCCc-CCCcCHHHHHHHHHHHcCccccccCcEEEE
Confidence            88743      36899999999998654322111111100 000 0011 1234689999999766654 3346899999


Q ss_pred             cCCCCCC
Q 015872          285 SGPRAWT  291 (399)
Q Consensus       285 ~~~~~~s  291 (399)
                      ++++.++
T Consensus       242 ~~g~~~~  248 (249)
T PRK09135        242 DGGRSLT  248 (249)
T ss_pred             CCCeecc
Confidence            9987654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.82  E-value=2.2e-19  Score=166.20  Aligned_cols=151  Identities=19%  Similarity=0.197  Sum_probs=117.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~  154 (399)
                      ++++|+||||+|+||.+++++|+++|++|++++|+.++. +.+...+++++++|++|++++.++++       ++|+|||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            457899999999999999999999999999999985432 22333468999999999998887775       7899999


Q ss_pred             CCCCCCC-----------CcchhccHHHH----HHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH---
Q 015872          155 CATGRPE-----------EPIKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL---  214 (399)
Q Consensus       155 ~a~~~~~-----------~~~~~~n~~~~----~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l---  214 (399)
                      ++|....           +...++|+.++    ..+++.+++.+.+++|++||.+.  +......|+.+|...+.+.   
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l  160 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDAL  160 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHH
Confidence            9984322           22335787774    55666777777789999999764  2333457999999999864   


Q ss_pred             ----HhCCCCEEEEecCcccccc
Q 015872          215 ----QDSGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       215 ----~~~g~~~~ilRp~~~~~~~  233 (399)
                          ...|+++++++||.+..+.
T Consensus       161 ~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        161 RLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             HHHhcccCCEEEEEecCCccccc
Confidence                2468999999999997654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.5e-19  Score=166.23  Aligned_cols=194  Identities=19%  Similarity=0.162  Sum_probs=136.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      +++|+||||+|+||.+++++|+++|++|++++|+.++......  ..++..+.+|++|++++.++++       ++|+||
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            5789999999999999999999999999999997543222111  1257789999999998877765       589999


Q ss_pred             ECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 015872          154 DCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       154 ~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~  216 (399)
                      |+||....           ...+++|+.++.++++++.    +.+.++||++||.+..  ..+...|+.+|...|.+.+.
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (277)
T PRK06180         84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISES  163 (277)
T ss_pred             ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHH
Confidence            99994221           1225689999999888853    4456799999997653  33557899999999876632


Q ss_pred             -------CCCCEEEEecCcccccccccchhh----hcccccccc------CCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          217 -------SGLPHVIIRLCGFMQGLIGQYAVP----ILEEKSVWG------TDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                             .|++++++|||.+.+++.......    .......+.      ..... ..+.+++|+|++++.+++++..
T Consensus       164 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~l~~~~~  240 (277)
T PRK06180        164 LAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG-KQPGDPAKAAQAILAAVESDEP  240 (277)
T ss_pred             HHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc-CCCCCHHHHHHHHHHHHcCCCC
Confidence                   589999999999875432211000    000000000      00011 2467889999999999987654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-19  Score=168.80  Aligned_cols=212  Identities=13%  Similarity=0.099  Sum_probs=146.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHH---H---hc
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPA---T---LV  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~---~---~~  147 (399)
                      |++++|+||||+|++|.++++.|+++|++|++++|+.+.....   +.    ..+++++.+|++|++++.+   +   +.
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   80 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG   80 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence            3457899999999999999999999999999999975432211   11    1257889999999888765   1   23


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ++|+|||++|....           ....++|+.++.++++++    ++.+.++||++||...  ...+..+|+.+|...
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~  160 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL  160 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHH
Confidence            57999999983221           112358888888877775    6667789999998654  234567899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhh---hcc-cc-------ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP---ILE-EK-------SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~---~~~-~~-------~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      +.+++       ..|++++++|||.+.++........   ... ..       .+..........+++++|+|++++.++
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  240 (280)
T PRK06914        161 EGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIA  240 (280)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHH
Confidence            98764       3589999999998886643211000   000 00       000000011225789999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHH
Q 015872          273 RNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~  293 (399)
                      +++... ..|+++++..+++.
T Consensus       241 ~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        241 ESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             cCCCCC-cccccCCchHHHHH
Confidence            987653 57888876554443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.7e-19  Score=163.29  Aligned_cols=208  Identities=19%  Similarity=0.138  Sum_probs=145.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +..++|+||||+|+||.++++.|+++|++|++++|+..+......    ..++.++++|+.|++++..+++       .+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            446789999999999999999999999999999998644322111    1247789999999999887764       57


Q ss_pred             CEEEECCCCCC-C-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      |+|||++|... .           +...++|+.++..+++.+.    +.+.++||++||....  ..+...|+.+|...+
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~  162 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVI  162 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHH
Confidence            99999998421 1           1234578877666665554    4567899999997653  334567999999988


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      .+.+       ..+++++.++||.+................ ..+...... ..+++++|+|++++.++.++.  ..|..
T Consensus       163 ~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (251)
T PRK07231        163 TLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFLASDEASWITGVT  241 (251)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCccccCCCCCe
Confidence            7663       248999999999887654333221100000 001111111 257899999999999997643  34778


Q ss_pred             EEEcCCCC
Q 015872          282 LTFSGPRA  289 (399)
Q Consensus       282 ~~l~~~~~  289 (399)
                      +.+.++..
T Consensus       242 ~~~~gg~~  249 (251)
T PRK07231        242 LVVDGGRC  249 (251)
T ss_pred             EEECCCcc
Confidence            88887643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=3.7e-19  Score=162.50  Aligned_cols=208  Identities=14%  Similarity=0.062  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +.+++|+||||+|+||++++++|+++|++|++..|+......    .+..  ..+..+.+|+++++++..+++       
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            345899999999999999999999999999888765332111    1111  145678899999888776654       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ++|+|||++|....           +...++|+.+..++++++.+.  ...+||++||....  ..+...|+.+|...|.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  163 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVIN  163 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHH
Confidence            68999999983211           123467888888888888754  22489999997753  3455789999999998


Q ss_pred             HHHh------CCCCEEEEecCcccccccccchhhhccc-cccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          213 FLQD------SGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       213 ~l~~------~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      +.+.      .++.+.+++|+.+.+....... ..... ...+.........+++++|+|++++.++..+...|++|++.
T Consensus       164 ~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~  242 (252)
T PRK06077        164 LTKYLALELAPKIRVNAIAPGFVKTKLGESLF-KVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIESITGQVFVLD  242 (252)
T ss_pred             HHHHHHHHHhcCCEEEEEeeCCccChHHHhhh-hcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccccCCCeEEec
Confidence            7642      3789999999988755322111 11000 00000000111268999999999999998766678999999


Q ss_pred             CCCC
Q 015872          286 GPRA  289 (399)
Q Consensus       286 ~~~~  289 (399)
                      +++.
T Consensus       243 ~g~~  246 (252)
T PRK06077        243 SGES  246 (252)
T ss_pred             CCee
Confidence            8853

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-19  Score=165.38  Aligned_cols=209  Identities=17%  Similarity=0.191  Sum_probs=146.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .++.++||||||+|+||++++++|+++|++|++++|+.+.....   .....+.++.+|++|++++..+++       ++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35568999999999999999999999999999999975432221   111245889999999988877664       68


Q ss_pred             CEEEECCCCC-CC-----------CcchhccHHHHHHHHHHHH----HcCC-cEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          150 HTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAK----AMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       150 d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~----~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      |+|||++|.. +.           ...++.|+.++.++++++.    ..+. ++++++||....  ..+...|+.+|...
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~  167 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV  167 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence            9999999854 21           2334688889888888773    3444 578888876542  23345699999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchhhhcc--cccc------ccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILE--EKSV------WGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |.+++.       .+++++++|||++++............  +...      +....... .+++++|+|+++..++...
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~a~~~~~l~~~~  246 (264)
T PRK12829        168 VGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLG-RMVEPEDIAATALFLASPA  246 (264)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCcc
Confidence            987633       589999999999986554332211000  0000      00000111 5899999999999988652


Q ss_pred             --ccCCcEEEEcCCCC
Q 015872          276 --KINGRTLTFSGPRA  289 (399)
Q Consensus       276 --~~~g~~~~l~~~~~  289 (399)
                        ...|+.|++.++..
T Consensus       247 ~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        247 ARYITGQAISVDGNVE  262 (264)
T ss_pred             ccCccCcEEEeCCCcc
Confidence              34688999998753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-19  Score=163.20  Aligned_cols=206  Identities=16%  Similarity=0.170  Sum_probs=148.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a  156 (399)
                      +++.++++||||+|+||.++++.|+++|++|++++|+.++........+..++.+|++|.+++.++++   ++|+|||++
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a   85 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA   85 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence            35568999999999999999999999999999999975443222223367889999999888887775   489999999


Q ss_pred             CCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH---
Q 015872          157 TGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ---  215 (399)
Q Consensus       157 ~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~---  215 (399)
                      |....           +....+|+.++.++++++.+.    + ..+||++||....  ..+...|+.+|..+|.+++   
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a  165 (245)
T PRK07060         86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLC  165 (245)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHH
Confidence            84321           112348899998888888653    2 3689999987543  3455789999999998763   


Q ss_pred             ----hCCCCEEEEecCcccccccccch-hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 ----DSGLPHVIIRLCGFMQGLIGQYA-VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 ----~~g~~~~ilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                          ..+++++.+||+.+.++...... ..... ..+.... . ...+++++|+|++++.++..+.  ..|+++++.++.
T Consensus       166 ~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        166 VELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKS-GPMLAAI-P-LGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HHHhhhCeEEEEEeeCCCCCchhhhhccCHHHH-HHHHhcC-C-CCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence                25799999999998866432111 11000 0111111 1 1258999999999999998643  358899998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=2.7e-19  Score=163.26  Aligned_cols=204  Identities=19%  Similarity=0.232  Sum_probs=144.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .+++|+||||+|+||.++++.|+++|++|+++ .|+.++...   .++.  .++.++.+|++|++++.++++       +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999998874 665432211   1111  247789999999998877765       5


Q ss_pred             CCEEEECCCCCCCCc-----------chhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|......           ..++|+.++.++++++..    .+.++||++||....  ..+...|+.+|...|
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~  162 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE  162 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence            899999998432221           235888888888877764    445699999997653  234578999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+++       ..|+++++++|+.+..+....+..  .+...  ..... .. -.+++.+|+|++++.++.++.  ..|+
T Consensus       163 ~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~~~~-~~-~~~~~~~dva~~~~~~~~~~~~~~~g~  238 (250)
T PRK08063        163 ALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLED--ARAKT-PA-GRMVEPEDVANAVLFLCSPEADMIRGQ  238 (250)
T ss_pred             HHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHH--HhcCC-CC-CCCcCHHHHHHHHHHHcCchhcCccCC
Confidence            8874       368999999999987654322110  00000  00000 11 147889999999999997643  3588


Q ss_pred             EEEEcCCCC
Q 015872          281 TLTFSGPRA  289 (399)
Q Consensus       281 ~~~l~~~~~  289 (399)
                      .+++.++..
T Consensus       239 ~~~~~gg~~  247 (250)
T PRK08063        239 TIIVDGGRS  247 (250)
T ss_pred             EEEECCCee
Confidence            999988754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.8e-19  Score=163.13  Aligned_cols=206  Identities=15%  Similarity=0.088  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+......   .+..  .++..+.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            456889999999999999999999999999999997433211   1111  246788999999988776654       5


Q ss_pred             CCEEEECCCCCCC--------------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCCCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE--------------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDKHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~~~~~~y~~~K~~~  210 (399)
                      +|+|||++|....              ....++|+.++.++++++...    +.++||++||..... +..+|+.+|...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~Y~~sK~a~  162 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-YSNFYGLAKVGL  162 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-CccccHHHHHHH
Confidence            8999999994211              122458999999988888754    356999999987653 567899999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      |.+.+.       .++.+++++||.+..+............ .. ...-.. ..+.+++|+|++++.++....  ..|++
T Consensus       163 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~d~a~~~~~~~~~~~~~~~g~~  239 (250)
T PRK07774        163 NGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVA-DM-VKGIPL-SRMGTPEDLVGMCLFLLSDEASWITGQI  239 (250)
T ss_pred             HHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHH-HH-HhcCCC-CCCcCHHHHHHHHHHHhChhhhCcCCCE
Confidence            987642       4789999999988755432211100000 00 000011 125678999999999987642  36889


Q ss_pred             EEEcCCCCC
Q 015872          282 LTFSGPRAW  290 (399)
Q Consensus       282 ~~l~~~~~~  290 (399)
                      |++.+++.+
T Consensus       240 ~~v~~g~~~  248 (250)
T PRK07774        240 FNVDGGQII  248 (250)
T ss_pred             EEECCCeec
Confidence            999998654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-19  Score=166.22  Aligned_cols=210  Identities=14%  Similarity=0.099  Sum_probs=150.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.++|+||||+|+||.++++.|+++|++|++++|+.+.......  ...+.++++|++|++++.++++       .+|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            345789999999999999999999999999999998553322111  1247889999999988877765       5899


Q ss_pred             EEECCCCCC-----------CCcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      |||++|...           .....++|+.++.++++++....     -.+||++||...  ...+...|+.+|...+.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY  163 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence            999998321           11224689999999999886432     247999998643  234567899999999877


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchh---hhc---ccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAV---PIL---EEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~---~~~---~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      .+       ..|+++++++||.++++.......   ...   .+.  ..++.....+ .+++++|+|++++.++..+.  
T Consensus       164 ~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~  242 (257)
T PRK07067        164 TQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLG-RMGVPDDLTGMALFLASADADY  242 (257)
T ss_pred             HHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCC-CccCHHHHHHHHHHHhCccccc
Confidence            63       368999999999998754332110   000   000  1122222222 68899999999999997643  


Q ss_pred             cCCcEEEEcCCCCCC
Q 015872          277 INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s  291 (399)
                      ..|++|++.+++.+|
T Consensus       243 ~~g~~~~v~gg~~~~  257 (257)
T PRK07067        243 IVAQTYNVDGGNWMS  257 (257)
T ss_pred             ccCcEEeecCCEeCC
Confidence            368999999986543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5.4e-19  Score=163.66  Aligned_cols=202  Identities=14%  Similarity=0.193  Sum_probs=141.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.+++|+||||+|+||.++++.|+++|++|.+++|+.+...+.   +..  ..+.++.+|++|.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3457899999999999999999999999999999874332211   111  246788999999998877665       5


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|.....           ...++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...|
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE  167 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence            79999999832211           113688999988888764    33456899999976542  23467999999999


Q ss_pred             HHHHh-------CCCCEEEEecCcccccccccc----hhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          212 QFLQD-------SGLPHVIIRLCGFMQGLIGQY----AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                      .+++.       .|++++++|||.+..+.....    ..........++.  .....+++++|+|++++.+++++. .+.
T Consensus       168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~a~~~~~~~~~-~~~  244 (274)
T PRK07775        168 AMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQ--ARHDYFLRASDLARAITFVAETPR-GAH  244 (274)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcc--cccccccCHHHHHHHHHHHhcCCC-CCC
Confidence            87743       489999999988764422111    1111111111111  112368999999999999998753 456


Q ss_pred             EEEEc
Q 015872          281 TLTFS  285 (399)
Q Consensus       281 ~~~l~  285 (399)
                      +||+.
T Consensus       245 ~~~~~  249 (274)
T PRK07775        245 VVNME  249 (274)
T ss_pred             eeEEe
Confidence            77775

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.4e-19  Score=160.92  Aligned_cols=207  Identities=13%  Similarity=0.092  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ++.++++||||+|+||.+++++|+++|++|+++.|+.+.......    ...+.++++|++|++++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            456789999999999999999999999999999998543222111    1247889999999998887764       68


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHH----HHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |+|||++|.....           ....+|+.++.++.++    +++.+.++||++||....  .....+|+.+|...+.
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS  162 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence            9999999943211           1245788887665554    456677899999997543  3455789999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +++.       .+++++++||+.+++................  ..........+++++|+|++++.++.++.  ..|..
T Consensus       163 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  242 (252)
T PRK06138        163 LTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTT  242 (252)
T ss_pred             HHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            7643       4899999999999866543322111111100  00000111137899999999999998754  24778


Q ss_pred             EEEcCC
Q 015872          282 LTFSGP  287 (399)
Q Consensus       282 ~~l~~~  287 (399)
                      +.+.++
T Consensus       243 ~~~~~g  248 (252)
T PRK06138        243 LVVDGG  248 (252)
T ss_pred             EEECCC
Confidence            888765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=4.9e-19  Score=162.12  Aligned_cols=208  Identities=14%  Similarity=0.146  Sum_probs=148.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|++++|+.++...   .+..  ..+..+++|++|.+++.++++       .
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            456899999999999999999999999999999997543221   1222  136788999999988887765       4


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|....           +....+|+.++.++++++.+.    +.++||++||....  ......|+.+|...+
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~  167 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVG  167 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence            8999999984321           122348889998888888653    56799999987643  334578999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      .+.+       ..|++++++||+.+.++....... ....  ..+....... .+..++|+|.+++.++.++.  ..|++
T Consensus       168 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~  244 (255)
T PRK07523        168 NLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFS--AWLEKRTPAG-RWGKVEELVGACVFLASDASSFVNGHV  244 (255)
T ss_pred             HHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHcCchhcCccCcE
Confidence            8763       468999999999988665332110 0000  0000010111 47788999999999997633  35889


Q ss_pred             EEEcCCCCCC
Q 015872          282 LTFSGPRAWT  291 (399)
Q Consensus       282 ~~l~~~~~~s  291 (399)
                      +++.++..+|
T Consensus       245 i~~~gg~~~~  254 (255)
T PRK07523        245 LYVDGGITAS  254 (255)
T ss_pred             EEECCCeecc
Confidence            9999886544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-18  Score=159.71  Aligned_cols=203  Identities=16%  Similarity=0.160  Sum_probs=142.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.++|+||||+|+||.++++.|+++|++|.++ .|+..+....   +.  ...++++.+|++|++++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            445789999999999999999999999999876 4653222111   11  1247789999999998877765       


Q ss_pred             ------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 ------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                            ++|+|||++|....           ....++|+.++.++++++.+.  +..+||++||....  ..+...|+.+
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~s  163 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLS  163 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhh
Confidence                  48999999984221           112348999999999988763  33589999987653  3455679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      |...+.+.+       ..++++++++||.+.+........    +..+  +.......-.+++++|+|+++..++.++. 
T Consensus       164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  239 (254)
T PRK12746        164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD----DPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSR  239 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc----ChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccC
Confidence            999987652       357999999999987654322111    0000  00001111256789999999998887643 


Q ss_pred             -cCCcEEEEcCC
Q 015872          277 -INGRTLTFSGP  287 (399)
Q Consensus       277 -~~g~~~~l~~~  287 (399)
                       ..|++|++.++
T Consensus       240 ~~~g~~~~i~~~  251 (254)
T PRK12746        240 WVTGQIIDVSGG  251 (254)
T ss_pred             CcCCCEEEeCCC
Confidence             35789999876

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.1e-18  Score=159.66  Aligned_cols=183  Identities=14%  Similarity=0.085  Sum_probs=134.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +++++|+||||||.||.++++.|+++|++|++++|+.++........ .++++.+|++|++++.++++       ++|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45678999999999999999999999999999999754432222222 47889999999988765553       57999


Q ss_pred             EECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH-
Q 015872          153 IDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL-  214 (399)
Q Consensus       153 i~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l-  214 (399)
                      ||++|.....           ...++|+.++..+++++    ++.+..+||++||....  ......|+.+|...+.+. 
T Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  162 (273)
T PRK07825         83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTD  162 (273)
T ss_pred             EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHH
Confidence            9999843221           12357888777765554    45667799999997653  334567999999887654 


Q ss_pred             ------HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          215 ------QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       215 ------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                            +..|+++++++|+.+..+.....             .......+++.+|+|++++.++.++.
T Consensus       163 ~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        163 AARLELRGTGVHVSVVLPSFVNTELIAGT-------------GGAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHhhccCcEEEEEeCCcCcchhhccc-------------ccccCCCCCCHHHHHHHHHHHHhCCC
Confidence                  34789999999988865543211             00112357899999999999998764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3e-18  Score=156.13  Aligned_cols=202  Identities=15%  Similarity=0.145  Sum_probs=144.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc-------cc--cCCcEEEEccCCCCCcHHHHhc----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF-------LR--DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~-------l~--~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      +++|+|+||||+|+||.++++.|+++|++|++++|........       +.  ...+.++.+|+.|.+++.++++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4468899999999999999999999999999988743322111       11  1247889999999988877763    


Q ss_pred             ---CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH-----HcCCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 ---GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~-----~~~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                         ++|+|||++|....           ....++|+.++.++++++.     +.+.+++|++||....  ..+...|+.+
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  163 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS  163 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence               58999999984331           1223689999999999987     4566799999997653  3456789999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      |...+.+.+       ..+++++++|||.+.+.........    ..+... .... .+.+.+|+|++++.++.+..  .
T Consensus       164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~-~~~~-~~~~~~~va~~~~~l~~~~~~~~  237 (249)
T PRK12827        164 KAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNP-VPVQ-RLGEPDEVAALVAFLVSDAASYV  237 (249)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhh-CCCc-CCcCHHHHHHHHHHHcCcccCCc
Confidence            998887653       2589999999999987644322110    000000 0111 35578999999999987632  3


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++++.++.
T Consensus       238 ~g~~~~~~~g~  248 (249)
T PRK12827        238 TGQVIPVDGGF  248 (249)
T ss_pred             cCcEEEeCCCC
Confidence            57899998763

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.80  E-value=2.9e-18  Score=155.93  Aligned_cols=204  Identities=17%  Similarity=0.144  Sum_probs=143.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +..++|+||||+|++|.++++.|+++|++|+++.|+..+...    .+.  ...+.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999887543211    111  2357788999999998877664       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      ++|+|||++|.....           ....+|+.++.++++++..    .+.++||++||....  ......|+.+|...
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~  162 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGV  162 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHH
Confidence            689999999843221           1234788888888877764    356789999986432  23456799999998


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC--CccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN--EKINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~--~~~~g~~  281 (399)
                      +.+++       ..++++++++||.+..+...........   .+....... .+.+++|+++++..++.+  ....|+.
T Consensus       163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (248)
T PRK05557        163 IGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKE---AILAQIPLG-RLGQPEEIASAVAFLASDEAAYITGQT  238 (248)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHH---HHHhcCCCC-CCcCHHHHHHHHHHHcCcccCCccccE
Confidence            87653       3589999999998764433221111110   000011111 467889999999988876  3346889


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      |++.++.
T Consensus       239 ~~i~~~~  245 (248)
T PRK05557        239 LHVNGGM  245 (248)
T ss_pred             EEecCCc
Confidence            9998763

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.80  E-value=5.8e-18  Score=139.64  Aligned_cols=194  Identities=19%  Similarity=0.222  Sum_probs=144.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC-CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR-PEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~-~~~  162 (399)
                      |||.|+||||.+|++++++++++||+|++++|+..+....   .++..++.|+.|++++.+.+.|.|+||..-+.. +.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            6899999999999999999999999999999997664332   578899999999999999999999999988744 222


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCC------------CCCCCCcHHHHHHHHH--HHHH-hCCCCEEEEecC
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEIKYCTE--QFLQ-DSGLPHVIIRLC  227 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~------------~~~~~~~y~~~K~~~E--~~l~-~~g~~~~ilRp~  227 (399)
                      .  .........|++..+.+++.|++.++..+.            +..|...|...+...|  +.|+ +..++||.+-|+
T Consensus        78 ~--~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPa  155 (211)
T COG2910          78 D--ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPA  155 (211)
T ss_pred             h--HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcH
Confidence            1  123344677899999999999999986543            2334444667777777  4454 456999999999


Q ss_pred             cccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          228 GFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      .++.+.-.  -.....++..+..+.+.. ++|+..|.|-+++.-++++.+..+.|.+.
T Consensus       156 a~f~PGer--Tg~yrlggD~ll~n~~G~-SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         156 AFFEPGER--TGNYRLGGDQLLVNAKGE-SRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             HhcCCccc--cCceEeccceEEEcCCCc-eeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            98865221  112222222222222333 78999999999999999998887777664

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=1.3e-18  Score=159.44  Aligned_cols=204  Identities=16%  Similarity=0.147  Sum_probs=143.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .|+|+||||+|+||.++++.|+++|++|++++|+..+..    ..++  ..++.++.+|++|++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999999998643321    1111  1257889999999888766654       68


Q ss_pred             CEEEECCCCCCC-------------CcchhccHHHHHHHHHHHHHc-----C-----CcEEEEecccCCC--CCCCCcHH
Q 015872          150 HTVIDCATGRPE-------------EPIKKVDWEGKVALIQCAKAM-----G-----IQKYVFYSIHNCD--KHPEVPLM  204 (399)
Q Consensus       150 d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa~~~-----~-----v~~~V~~Ss~~~~--~~~~~~y~  204 (399)
                      |+|||++|....             ....++|+.++.++++++...     +     +.+||++||....  ..+...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999984211             112468999999988887543     1     4679999997653  34567899


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      .+|..+|.+++       ..|+++++++||.+.+............   .+..+......+.+.+|+++++..++.... 
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~  238 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDA---LIAKGLVPMPRWGEPEDVARAVAALASGDLP  238 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHh---hhhhcCCCcCCCcCHHHHHHHHHHHhCCccc
Confidence            99999998763       3689999999998876543222111110   000000011147789999999999886532 


Q ss_pred             -cCCcEEEEcCCCC
Q 015872          277 -INGRTLTFSGPRA  289 (399)
Q Consensus       277 -~~g~~~~l~~~~~  289 (399)
                       ..|++|++.++..
T Consensus       239 ~~~G~~~~i~gg~~  252 (256)
T PRK12745        239 YSTGQAIHVDGGLS  252 (256)
T ss_pred             ccCCCEEEECCCee
Confidence             3588999988754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2e-18  Score=155.09  Aligned_cols=194  Identities=15%  Similarity=0.126  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhc---CCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLV---GVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~  157 (399)
                      ++|+|+||||+|++|+++++.|+++ ++|++++|+..+...... ..+++++++|++|++++.++++   ++|+|||++|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4578999999999999999999999 999999997543221111 1268899999999999988886   5999999998


Q ss_pred             CCCCC-----------cchhccHHH----HHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh----
Q 015872          158 GRPEE-----------PIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD----  216 (399)
Q Consensus       158 ~~~~~-----------~~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~----  216 (399)
                      .....           ...++|+.+    +.++++++++.+ +++|++||....  ..+..+|+.+|...+.+++.    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~  159 (227)
T PRK08219         81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRALADALREE  159 (227)
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHH
Confidence            43221           113566666    445555555543 589999987653  33457899999999876632    


Q ss_pred             -CC-CCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          217 -SG-LPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       217 -~g-~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                       .+ +++..++||.+.++........  .+. .+     ....+++++|+|++++.+++++. .+.++++.-
T Consensus       160 ~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~-~~-----~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~~  222 (227)
T PRK08219        160 EPGNVRVTSVHPGRTDTDMQRGLVAQ--EGG-EY-----DPERYLRPETVAKAVRFAVDAPP-DAHITEVVV  222 (227)
T ss_pred             hcCCceEEEEecCCccchHhhhhhhh--hcc-cc-----CCCCCCCHHHHHHHHHHHHcCCC-CCccceEEE
Confidence             34 8999999988765432221110  010 11     11258999999999999998764 456777754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=159.37  Aligned_cols=208  Identities=21%  Similarity=0.181  Sum_probs=141.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--cccccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+....  ...+..  ..+.++++|++|.+++.++++       +
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            35568999999999999999999999999999999973211  111111  246788999999887766654       5


Q ss_pred             CCEEEECCCCC----CCC--------cchhccHHHHH----HHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHH
Q 015872          149 VHTVIDCATGR----PEE--------PIKKVDWEGKV----ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       149 ~d~Vi~~a~~~----~~~--------~~~~~n~~~~~----~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~  212 (399)
                      +|+|||+||..    +..        ...++|+.++.    .+++.+++.+..+||++||......+..+|+.+|...+.
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a~~~  164 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVNA  164 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHHHHH
Confidence            89999999832    111        11246766665    455555566667999999987765566789999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccc--hhhhcccc-c----c---ccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQY--AVPILEEK-S----V---WGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~--~~~~~~~~-~----~---~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +.+.       .|++++.++||++++......  ........ .    +   ........ -+.+++|+|++++.++.++
T Consensus       165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~  243 (260)
T PRK12823        165 LTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK-RYGTIDEQVAAILFLASDE  243 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc-cCCCHHHHHHHHHHHcCcc
Confidence            7642       489999999999987531100  00000000 0    0   00000111 3567899999999998654


Q ss_pred             c--cCCcEEEEcCCC
Q 015872          276 K--INGRTLTFSGPR  288 (399)
Q Consensus       276 ~--~~g~~~~l~~~~  288 (399)
                      .  ..|+++++.+++
T Consensus       244 ~~~~~g~~~~v~gg~  258 (260)
T PRK12823        244 ASYITGTVLPVGGGD  258 (260)
T ss_pred             cccccCcEEeecCCC
Confidence            2  368899998875

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=2.5e-18  Score=156.57  Aligned_cols=204  Identities=14%  Similarity=0.115  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhcC------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLVG------  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~~------  148 (399)
                      +..++++||||+|+||.+++++|+++|++|+++.+..+...+    .+..  .++.++.+|++|++++.++++.      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            446899999999999999999999999999877654332211    1111  2478899999999988877754      


Q ss_pred             -CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          149 -VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 -~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                       +|+|||++|.....           ..+++|+.++..+++++..    .+..+||++||....  ..+..+|+.+|...
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGM  163 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHH
Confidence             79999999842221           2235889999888888864    345689999997542  34567899999998


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTL  282 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~  282 (399)
                      +.+.+       ..++++++++||.+..+...........  . +....+.+ .+++++|++++++.+++... ..|+.|
T Consensus       164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~--~-~~~~~~~~-~~~~~edva~~~~~~~~~~~~~~g~~~  239 (247)
T PRK12935        164 LGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQ--K-IVAKIPKK-RFGQADEIAKGVVYLCRDGAYITGQQL  239 (247)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHH--H-HHHhCCCC-CCcCHHHHHHHHHHHcCcccCccCCEE
Confidence            87653       2589999999998876543322111111  0 10111222 68999999999999997643 468999


Q ss_pred             EEcCCC
Q 015872          283 TFSGPR  288 (399)
Q Consensus       283 ~l~~~~  288 (399)
                      ++.++.
T Consensus       240 ~i~~g~  245 (247)
T PRK12935        240 NINGGL  245 (247)
T ss_pred             EeCCCc
Confidence            999874

>PRK06194 hypothetical protein; Provisional

Probab=99.79  E-value=2.3e-18  Score=160.49  Aligned_cols=209  Identities=14%  Similarity=0.013  Sum_probs=145.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++++||||||+|+||.++++.|+++|++|++++|+.+.....   +..  .++.++.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4467899999999999999999999999999999974432211   111  246779999999998887775       4


Q ss_pred             CCEEEECCCCCCC--------C---cchhccHHHHHHHHHH----HHHcCC------cEEEEecccCCCC--CCCCcHHH
Q 015872          149 VHTVIDCATGRPE--------E---PIKKVDWEGKVALIQC----AKAMGI------QKYVFYSIHNCDK--HPEVPLME  205 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------~---~~~~~n~~~~~~l~~a----a~~~~v------~~~V~~Ss~~~~~--~~~~~y~~  205 (399)
                      +|+|||+||....        +   ...++|+.++.+++++    +.+.+.      .++|++||.....  .+..+|+.
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  163 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNV  163 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHH
Confidence            7999999994221        1   1245899988886666    444443      5899999976542  34567999


Q ss_pred             HHHHHHHHHHh---------CCCCEEEEecCcccccccccchhhhccc--cccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          206 IKYCTEQFLQD---------SGLPHVIIRLCGFMQGLIGQYAVPILEE--KSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       206 ~K~~~E~~l~~---------~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +|...+.+.+.         .++++..+.|+.+...+..     ...+  ..+++.+.+++ ++++++|.+..+....  
T Consensus       164 sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--  235 (287)
T PRK06194        164 SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ-----SERNRPADLANTAPPTR-SQLIAQAMSQKAVGSG--  235 (287)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc-----ccccCchhcccCccccc-hhhHHHHHHHhhhhcc--
Confidence            99999987632         2466777888666544322     1111  13344444444 8999999887754221  


Q ss_pred             CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeee
Q 015872          275 EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTM  311 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~  311 (399)
                                    .++..|+++.+.+.+.....++.
T Consensus       236 --------------~~s~~dva~~i~~~~~~~~~~~~  258 (287)
T PRK06194        236 --------------KVTAEEVAQLVFDAIRAGRFYIY  258 (287)
T ss_pred             --------------CCCHHHHHHHHHHHHHcCCeEEE
Confidence                          17999999999987765433333

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.79  E-value=2.6e-18  Score=156.77  Aligned_cols=206  Identities=15%  Similarity=0.196  Sum_probs=145.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ++++||||||+|+||.+++++|+++|++|++++|+.+.....   +.  ..++.++++|++|.+++.++++       ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999975432211   11  1357889999999988877764       58


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |+|||++|....           ....++|+.++.++++++.    +.+.+++|++||.+..  ......|+.+|.+.+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA  161 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence            999999983211           1224688999988877764    5567799999997653  3345679999988887


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhcccccc---ccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSV---WGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      +.+.       .++++++++|+.+++...............+   +....... .+...+|+|+++..++..+.  ..|+
T Consensus       162 ~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~g~  240 (250)
T TIGR03206       162 FSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLG-RLGQPDDLPGAILFFSSDDASFITGQ  240 (250)
T ss_pred             HHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCcc-CCcCHHHHHHHHHHHcCcccCCCcCc
Confidence            6532       4899999999999876543322111110000   00000111 35667999999999987643  3588


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++++.++.
T Consensus       241 ~~~~~~g~  248 (250)
T TIGR03206       241 VLSVSGGL  248 (250)
T ss_pred             EEEeCCCc
Confidence            99998763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.6e-18  Score=158.41  Aligned_cols=151  Identities=18%  Similarity=0.192  Sum_probs=119.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--------CCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--------GVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--------~~d~Vi~  154 (399)
                      +++|+||||+|+||.++++.|+++|++|++++|+.+.. ..+...+++++.+|++|.+++.++++        .+|+|||
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-AALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            46899999999999999999999999999999985432 33444578899999999888766653        4799999


Q ss_pred             CCCCCCC-----------CcchhccHHH----HHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH---
Q 015872          155 CATGRPE-----------EPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL---  214 (399)
Q Consensus       155 ~a~~~~~-----------~~~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l---  214 (399)
                      +||....           ....++|+.|    +.++++.+++.+..+||++||....  ..+...|+.+|..++.+.   
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  162 (277)
T PRK05993         83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTL  162 (277)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHH
Confidence            9983221           1234688888    6667788888888899999997543  344578999999999875   


Q ss_pred             ----HhCCCCEEEEecCccccccc
Q 015872          215 ----QDSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       215 ----~~~g~~~~ilRp~~~~~~~~  234 (399)
                          ...|+++++++||.+..++.
T Consensus       163 ~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        163 RMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             HHHhhhhCCEEEEEecCCccCchh
Confidence                34789999999998876543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-17  Score=150.58  Aligned_cols=198  Identities=18%  Similarity=0.196  Sum_probs=139.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc------CCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~------~~d~Vi~~  155 (399)
                      ..|+|+||||+|+||.++++.|+++|++|++++|+..+.      ...+++++|++|.+++.++++      ++|+|||+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            357899999999999999999999999999999975541      123678999999988877665      68999999


Q ss_pred             CCCCCCCc-----------chhccHHHHHHHHHH----HHHcCCcEEEEecccCCCC-CCCCcHHHHHHHHHHHHH----
Q 015872          156 ATGRPEEP-----------IKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCDK-HPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       156 a~~~~~~~-----------~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~~-~~~~~y~~~K~~~E~~l~----  215 (399)
                      +|......           ..++|+.++.++.++    +++.+..++|++||..... ....+|..+|...+.+.+    
T Consensus        76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~~~~~~a~  155 (234)
T PRK07577         76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKSALVGCTRTWAL  155 (234)
T ss_pred             CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            99432211           234677776665444    4556778999999986543 345789999999987763    


Q ss_pred             ---hCCCCEEEEecCcccccccccchhhhccc--cccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 ---DSGLPHVIIRLCGFMQGLIGQYAVPILEE--KSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 ---~~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                         ..|++++++|||.+..+...... +....  ..+....+..  .+...+|+|++++.++..+.  ..|+.+.+.++.
T Consensus       156 e~~~~gi~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        156 ELAEYGITVNAVAPGPIETELFRQTR-PVGSEEEKRVLASIPMR--RLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHhhCcEEEEEecCcccCccccccc-ccchhHHHHHhhcCCCC--CCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence               35899999999988765432110 00000  0011010111  24577999999999997643  457888888764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.78  E-value=3.5e-18  Score=156.49  Aligned_cols=199  Identities=18%  Similarity=0.212  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c----ccCCcEEEEccCCCCCcHHHHhcC------
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L----RDWGATVVNADLSKPETIPATLVG------  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l----~~~~v~~~~~Dl~d~~~l~~~~~~------  148 (399)
                      +.|+|+||||+|+||.++++.|+++|++|+++.|+.++....   +    ....+.++++|++|++++.++++.      
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            358899999999999999999999999999999975443211   1    112456779999999988877753      


Q ss_pred             -CCEEEECCCCCC---C-----------CcchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCCC-----------
Q 015872          149 -VHTVIDCATGRP---E-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDKH-----------  198 (399)
Q Consensus       149 -~d~Vi~~a~~~~---~-----------~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~~-----------  198 (399)
                       +|+|||+|+...   .           ....++|+.+...    +++.+++.+.++||++||......           
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  162 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM  162 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence             899999997321   0           1122456655554    445555567789999998653211           


Q ss_pred             -CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHH
Q 015872          199 -PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       199 -~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                       ....|+.+|...+.+.+       ..++++++++||.++++....+... .... .     .. ..+++++|+|++++.
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~-~~~~-~-----~~-~~~~~~~dva~~~~~  234 (256)
T PRK09186        163 TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA-YKKC-C-----NG-KGMLDPDDICGTLVF  234 (256)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH-HHhc-C-----Cc-cCCCCHHHhhhhHhh
Confidence             12369999999988763       3679999999998875432111111 1110 0     11 257899999999999


Q ss_pred             HHhCCc--cCCcEEEEcCCC
Q 015872          271 ALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       271 ~l~~~~--~~g~~~~l~~~~  288 (399)
                      ++.+..  ..|+.+.+.++.
T Consensus       235 l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             eeccccccccCceEEecCCc
Confidence            997643  357888887763

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3e-18  Score=157.00  Aligned_cols=194  Identities=17%  Similarity=0.154  Sum_probs=132.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c--ccCCcEEEEccCCCCCcHHHHhc-CCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L--RDWGATVVNADLSKPETIPATLV-GVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l--~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a  156 (399)
                      +++||||||+|+||.++++.|+++|++|++++|+.++....   .  ...++.++++|++|++++.+++. ++|+|||++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            46899999999999999999999999999999974332111   0  11257889999999999988887 899999999


Q ss_pred             CCCCCC-----------cchhccHHHHHHH----HHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHH-----
Q 015872          157 TGRPEE-----------PIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFL-----  214 (399)
Q Consensus       157 ~~~~~~-----------~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l-----  214 (399)
                      |.....           ...++|+.++.++    +..+++.+.++||++||.....  .....|+.+|...|.+.     
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  161 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHA  161 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHH
Confidence            843211           1234677766554    4455666778999999875432  23467999999999765     


Q ss_pred             --HhCCCCEEEEecCcccccccccchhhh---cccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          215 --QDSGLPHVIIRLCGFMQGLIGQYAVPI---LEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       215 --~~~g~~~~ilRp~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                        ...|++++++|||.+..++........   ....  .+.........++++.+|+++.++.++.++.
T Consensus       162 ~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        162 ELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence              346999999999988765432221111   1000  0111111222345677888888888776543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.78  E-value=3.6e-18  Score=146.83  Aligned_cols=290  Identities=13%  Similarity=0.137  Sum_probs=182.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-c---ccc-------ccCCcEEEEccCCCCCcHHHHhc--CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-A---DFL-------RDWGATVVNADLSKPETIPATLV--GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~---~~l-------~~~~v~~~~~Dl~d~~~l~~~~~--~~d  150 (399)
                      |..||||-||.=|++|++.|+.+||+|+++.|....- .   +.+       ........-||++|...|.+.+.  .++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            5679999999999999999999999999999964321 1   111       11236778899999999998887  578


Q ss_pred             EEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCc---EEEEecccCC-------------CCCCCCcHHHHH
Q 015872          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNC-------------DKHPEVPLMEIK  207 (399)
Q Consensus       151 ~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~---~~V~~Ss~~~-------------~~~~~~~y~~~K  207 (399)
                      -|+|+|+..       -++..-+++..|+..|+++.+.++..   ||-..||...             +-.|.+||+.+|
T Consensus       109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aK  188 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAK  188 (376)
T ss_pred             hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhh
Confidence            999999822       23334467888999999999998743   7888887532             234678899988


Q ss_pred             HHHHHHHHhCCCCEEEEec-Cccc--------cccccc----chhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          208 YCTEQFLQDSGLPHVIIRL-CGFM--------QGLIGQ----YAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       208 ~~~E~~l~~~g~~~~ilRp-~~~~--------~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+-=++-.+.-.+..+-. |.+|        .++..+    .+..+.-+.  .+..+.-+...+|-|..|-++++...+
T Consensus       189 my~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mL  268 (376)
T KOG1372|consen  189 MYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLML  268 (376)
T ss_pred             hhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHH
Confidence            7663211111111111111 1112        122221    111111111  233344466679999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhh-hhhhhhhhhhhhccCccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTN-DVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +++.+  .-|.|+.++..|++|+++.-...+|....+..-......   .- . -+... .+..  .|.. -+.-...-.
T Consensus       269 Q~d~P--dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~---~n-~-~g~v~V~v~~--kYyR-PtEVd~LqG  338 (376)
T KOG1372|consen  269 QQDSP--DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVG---KN-D-DGVVRVKVDP--KYYR-PTEVDTLQG  338 (376)
T ss_pred             hcCCC--CceEEecCCcccHHHHHHHHHHhhCcEEeeccccccccc---cc-C-CceEEEEecc--cccC-cchhhhhcC
Confidence            99865  568899999999999999988888855443311000000   00 0 00000 0000  0000 000011124


Q ss_pred             cccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          352 PMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      |.+|+++.|||+|+  .+++|-+++++..-..-.
T Consensus       339 dasKAk~~LgW~pk--v~f~eLVkeMv~~DieLm  370 (376)
T KOG1372|consen  339 DASKAKKTLGWKPK--VTFPELVKEMVASDIELM  370 (376)
T ss_pred             ChHHHHHhhCCCCc--cCHHHHHHHHHHhHHHHH
Confidence            67899999999999  899999999887654433

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.78  E-value=5.7e-18  Score=155.40  Aligned_cols=206  Identities=14%  Similarity=0.125  Sum_probs=142.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc----CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD----WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~----~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++|+||||+|+||.++++.|+++|++|++++|+.......   +..    ..+.++.+|++|.+++..+++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999975432211   111    247889999999888776654       5


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      +|+|||++|....           +...++|+.++..+++++..    .+ -.++|++||...  ......+|+.+|...
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            7999999983221           12235788887776666643    45 348999998643  223456899999998


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccc-cchhhhcc------cc--ccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIG-QYAVPILE------EK--SVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~-~~~~~~~~------~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.+.+       ..|+++.++|||.+++.... ........      +.  ..+..+...+ .+++++|++++++.++.+
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLK-RGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCccc-CCCCHHHHHHHHHHHcCc
Confidence            76652       47899999999987653221 11111000      00  1122222223 688999999999998875


Q ss_pred             Cc--cCCcEEEEcCCCC
Q 015872          275 EK--INGRTLTFSGPRA  289 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~~  289 (399)
                      ..  ..|++|++.+++.
T Consensus       241 ~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        241 KASYCTGQSINVTGGQV  257 (259)
T ss_pred             ccccccCceEEEcCCEE
Confidence            43  3588999998763

>PLN02253 xanthoxin dehydrogenase

Probab=99.78  E-value=4.4e-18  Score=158.05  Aligned_cols=214  Identities=14%  Similarity=0.105  Sum_probs=146.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc-cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~-~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+.....+.   +. ..++.++++|++|.+++.++++       +
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            34568899999999999999999999999999999874332211   11 1257899999999988887775       6


Q ss_pred             CCEEEECCCCCCC-------------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          149 VHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      +|+|||+||....             ....++|+.++.++++++...    +-.++|++||....  ......|+.+|..
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHA  174 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHH
Confidence            8999999984211             123568999998888877542    33478998886542  2344689999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhh------hcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVP------ILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .|.+.+.       .|+++..++||.+...........      ..... .............++++|+|++++.++.++
T Consensus       175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~  254 (280)
T PLN02253        175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDE  254 (280)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcc
Confidence            9987642       589999999998875432111100      00000 000000011113478999999999998764


Q ss_pred             c--cCCcEEEEcCCCCCCHH
Q 015872          276 K--INGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       276 ~--~~g~~~~l~~~~~~s~~  293 (399)
                      .  ..|..+++.|+...+..
T Consensus       255 ~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        255 ARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             cccccCcEEEECCchhhccc
Confidence            3  35789999887544433

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.7e-18  Score=156.50  Aligned_cols=207  Identities=14%  Similarity=0.140  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.|+|+||||+|+||++++++|+++|++|++++|+..+....   +.  ..++.++.+|++|++++.++++       .
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            4468899999999999999999999999999999975432211   11  1247889999999988876653       5


Q ss_pred             CCEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|...+            ....++|+.++..+++++...   ..++||++||....  ..+...|+.+|...+
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  162 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALL  162 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHH
Confidence            8999999984211            122458899999999888653   22489999987653  234568999999999


Q ss_pred             HHHHh-------CCCCEEEEecCcccccccccchhhhcccc-----cccc---CCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          212 QFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK-----SVWG---TDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      .+++.       .++++++++||.+++.....++.......     .++.   ...... .+.+++|+|++++.++... 
T Consensus       163 ~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~a~~~l~~~~~  241 (258)
T PRK07890        163 AASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLK-RLPTDDEVASAVLFLASDLA  241 (258)
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcc-ccCCHHHHHHHHHHHcCHhh
Confidence            87642       58999999999998765433222111110     0000   000111 4678899999999988752 


Q ss_pred             -ccCCcEEEEcCCC
Q 015872          276 -KINGRTLTFSGPR  288 (399)
Q Consensus       276 -~~~g~~~~l~~~~  288 (399)
                       ...|+++.+.++.
T Consensus       242 ~~~~G~~i~~~gg~  255 (258)
T PRK07890        242 RAITGQTLDVNCGE  255 (258)
T ss_pred             hCccCcEEEeCCcc
Confidence             3457778777764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.5e-18  Score=155.41  Aligned_cols=214  Identities=13%  Similarity=0.107  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc---c--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l---~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.++|+||||+|.||.+++++|+++|++|++++|+.+.. +..   .  ..++.++.+|++|++++.++++       
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46678999999999999999999999999999999975543 111   1  1257889999999998877774       


Q ss_pred             CCCEEEECCCCCCC----------CcchhccHHHHHHHHHHHHH---cCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~~---~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ++|+|||++|....          ....++|+.+..++.+++..   .+..+||++||....  ..+...|+.+|...+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLA  162 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHH
Confidence            58999999983221          11235788888887777653   233689999987543  2345789999999998


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccc---cCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVW---GTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      +.+       ..+++++.++||.+++.....+...........   .........++..+|+|++++.++..+  ...|+
T Consensus       163 ~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  242 (258)
T PRK08628        163 LTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQ  242 (258)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCc
Confidence            774       258999999999998765433222111110000   000011014678899999999999764  34578


Q ss_pred             EEEEcCCCCCCHHHH
Q 015872          281 TLTFSGPRAWTTQEV  295 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~  295 (399)
                      .+.+.++. ..+++.
T Consensus       243 ~~~~~gg~-~~~~~~  256 (258)
T PRK08628        243 WLFVDGGY-VHLDRA  256 (258)
T ss_pred             eEEecCCc-cccccc
Confidence            88887763 555543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.7e-17  Score=152.31  Aligned_cols=208  Identities=18%  Similarity=0.150  Sum_probs=144.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-------cCCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-------~~~d~V  152 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+..+..    ..++.++++|+.|++++.+++       .++|+|
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----PEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            455689999999999999999999999999999999754321    235788999999988776554       368999


Q ss_pred             EECCCCCC-------------CCcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCCC---CCCcHHHHHHHHHH
Q 015872          153 IDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH---PEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~~-------------~~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~~---~~~~y~~~K~~~E~  212 (399)
                      ||+||...             .+..+++|+.++..+.+++    ++.+..++|++||......   +..+|+.+|...+.
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~  161 (260)
T PRK06523         82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALST  161 (260)
T ss_pred             EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHH
Confidence            99998321             1122357888887665544    4555678999999876432   46789999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhcccc---------ccccCCCCcc-eeceeHHHHHHHHHHHHhCC
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---------SVWGTDALTR-IAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +.+       ..|+++.+++||.+..+....+........         .+.-.-...+ -.+...+|+|++++.++.++
T Consensus       162 l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~  241 (260)
T PRK06523        162 YSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDR  241 (260)
T ss_pred             HHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcc
Confidence            753       258999999999998654332211110000         0000000011 13567899999999999763


Q ss_pred             --ccCCcEEEEcCCCCCC
Q 015872          276 --KINGRTLTFSGPRAWT  291 (399)
Q Consensus       276 --~~~g~~~~l~~~~~~s  291 (399)
                        ...|+.+.+.++...|
T Consensus       242 ~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        242 AASITGTEYVIDGGTVPT  259 (260)
T ss_pred             cccccCceEEecCCccCC
Confidence              3468899999886554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.9e-18  Score=156.18  Aligned_cols=208  Identities=15%  Similarity=0.147  Sum_probs=143.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .+..|+++||||+|.||.++++.|+++|++|+++.|+.++..+.+...++.++.+|++|++++.++++       ++|+|
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            34568999999999999999999999999999988765444334444468899999999988877764       58999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC---CCCCcHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK---HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~---~~~~~y~~~K~~~E~~l  214 (399)
                      ||++|....           ....++|+.++..    +++.+++.+..++|++||.....   .....|+.+|...+.+.
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~  163 (255)
T PRK06463         84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILT  163 (255)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHH
Confidence            999984211           1223578888544    45555555567999999976542   33467999999999876


Q ss_pred             Hh-------CCCCEEEEecCcccccccccchhhh--ccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          215 QD-------SGLPHVIIRLCGFMQGLIGQYAVPI--LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       215 ~~-------~g~~~~ilRp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.       .|+++..++||.+............  ......+......+ .+...+|+|++++.++..+.  ..|+++.
T Consensus       164 ~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~~~~  242 (255)
T PRK06463        164 RRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLK-TTGKPEDIANIVLFLASDDARYITGQVIV  242 (255)
T ss_pred             HHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcC-CCcCHHHHHHHHHHHcChhhcCCCCCEEE
Confidence            32       5899999999988654321110000  00000000111111 35678999999999987643  4688999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.++.
T Consensus       243 ~dgg~  247 (255)
T PRK06463        243 ADGGR  247 (255)
T ss_pred             ECCCe
Confidence            98875

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.6e-18  Score=156.00  Aligned_cols=149  Identities=15%  Similarity=0.144  Sum_probs=118.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~~  155 (399)
                      .++|+||||+|+||.+++++|+++|++|++++|+..+...   ..+++++++|++|++++.++++       .+|+|||+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            4689999999999999999999999999999997544321   2368899999999999888775       47999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHH----HHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH---
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ---  215 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~---  215 (399)
                      +|....           ...+++|+.++.+++++    +++.+.++||++||....  ......|+.+|...+.+.+   
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~  160 (270)
T PRK06179         81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLD  160 (270)
T ss_pred             CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHH
Confidence            994321           22346888888887776    466778899999997543  2234679999999998753   


Q ss_pred             ----hCCCCEEEEecCccccccc
Q 015872          216 ----DSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       216 ----~~g~~~~ilRp~~~~~~~~  234 (399)
                          +.|+++++++||.+.+++.
T Consensus       161 ~el~~~gi~v~~v~pg~~~t~~~  183 (270)
T PRK06179        161 HEVRQFGIRVSLVEPAYTKTNFD  183 (270)
T ss_pred             HHHhhhCcEEEEEeCCCcccccc
Confidence                3699999999999876554

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.5e-18  Score=157.53  Aligned_cols=217  Identities=15%  Similarity=0.060  Sum_probs=148.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+....   .+...  .+.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            456889999999999999999999999999999987543222   12222  36778999999988877664       4


Q ss_pred             CCEEEECCCCCC--------C---CcchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRP--------E---EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~--------~---~~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      +|+|||+||...        .   ....++|+.++.++++++.    +.+ ..++|++||....  ..+...|+.+|..+
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  163 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV  163 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence            799999998321        1   1223689999988888764    343 4589999987643  34457799999986


Q ss_pred             HHHH-------HhCCCCEEEEecCcccccccccchhhh----cccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          211 EQFL-------QDSGLPHVIIRLCGFMQGLIGQYAVPI----LEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       211 E~~l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      +.+.       ...|+++++++|+.+.++.........    .... ...........++++++|+|++++.++.++   
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~---  240 (275)
T PRK05876        164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN---  240 (275)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC---
Confidence            5443       236899999999988766543211000    0000 011111122347899999999999999864   


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHh
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLA  303 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~  303 (399)
                       +.|.+.++  ....++.+.+.+..
T Consensus       241 -~~~~~~~~--~~~~~~~~~~~~~~  262 (275)
T PRK05876        241 -RLYVLPHA--ASRASIRRRFERID  262 (275)
T ss_pred             -CeEEecCh--hhHHHHHHHHHHHH
Confidence             45656543  45566666555544

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.3e-18  Score=155.08  Aligned_cols=203  Identities=15%  Similarity=0.078  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++|+++||||+|+||.++++.|+++|++|+++++...+....    +.  ...+.++.+|++|.+++.++++       +
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999888753322111    11  2247789999999988877764       4


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC-CCC-CCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD-KHP-EVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~-~~~-~~~y~~~K~~~E  211 (399)
                      +|+|||+||....           +...++|+.++.++++++...    +-.++|+++|.... ..| ..+|+.+|..+|
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~  167 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALW  167 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHH
Confidence            7999999984221           223468999999988887653    23478888876443 223 358999999998


Q ss_pred             HHHHh------CCCCEEEEecCccccccccc--chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEE
Q 015872          212 QFLQD------SGLPHVIIRLCGFMQGLIGQ--YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLT  283 (399)
Q Consensus       212 ~~l~~------~g~~~~ilRp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~  283 (399)
                      .+.+.      .++.++.++||.+.......  .+......   ..    .. ...+++|+|++++.+++.+...|+.|+
T Consensus       168 ~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---~~----~~-~~~~~~d~a~~~~~~~~~~~~~g~~~~  239 (258)
T PRK09134        168 TATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAA---TP----LG-RGSTPEEIAAAVRYLLDAPSVTGQMIA  239 (258)
T ss_pred             HHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhc---CC----CC-CCcCHHHHHHHHHHHhcCCCcCCCEEE
Confidence            76643      24889999999886532110  01111110   00    01 246789999999999998766789999


Q ss_pred             EcCCCCCCH
Q 015872          284 FSGPRAWTT  292 (399)
Q Consensus       284 l~~~~~~s~  292 (399)
                      +.++..+++
T Consensus       240 i~gg~~~~~  248 (258)
T PRK09134        240 VDGGQHLAW  248 (258)
T ss_pred             ECCCeeccc
Confidence            998865554

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.8e-18  Score=152.84  Aligned_cols=205  Identities=15%  Similarity=0.126  Sum_probs=145.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +..++|+||||+|+||.++++.|+++|++|++++|+.++...   .+..  .++.++++|++|++++.++++       +
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            446899999999999999999999999999999987543221   1111  257889999999998877763       6


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|.....           .....|+.++.++++++...    +..+||++||....  ......|+.+|...+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~  164 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVI  164 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHH
Confidence            89999999843221           12357888988888887543    34499999997543  233457999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..+++++.++||.+..+...........  ..+...... ..+++++|+|++++.++..+.  ..|+.+
T Consensus       165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~i  241 (250)
T PRK12939        165 GMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERH--AYYLKGRAL-ERLQVPDDVAGAVLFLLSDAARFVTGQLL  241 (250)
T ss_pred             HHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHH--HHHHhcCCC-CCCCCHHHHHHHHHHHhCccccCccCcEE
Confidence            8764       2579999999998865543211000000  001111122 257899999999999998642  468899


Q ss_pred             EEcCCC
Q 015872          283 TFSGPR  288 (399)
Q Consensus       283 ~l~~~~  288 (399)
                      .+.++.
T Consensus       242 ~~~gg~  247 (250)
T PRK12939        242 PVNGGF  247 (250)
T ss_pred             EECCCc
Confidence            998874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=8e-18  Score=152.53  Aligned_cols=185  Identities=15%  Similarity=0.150  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+..+..+   .+..  .++.++.+|++|++++.++++       +
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            445789999999999999999999999999999997543221   1111  247789999999998877775       6


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|....           ...+++|+.++.++++++.    +.+.+++|++||....  ..+...|+.+|...+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  164 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVL  164 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence            8999999984321           1234688888888877775    4456789999987543  334467999999988


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+++       ..|++++++|||.+.+.......  . .      . .. ...++..+|+|++++.++.++.
T Consensus       165 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~--~-~------~-~~-~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        165 GLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG--L-T------D-GN-PDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccCcchhhcc--c-c------c-cC-CCCCCCHHHHHHHHHHHHhCCC
Confidence            7753       36899999999998866432211  0 0      0 01 1246788999999999998763

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.5e-17  Score=150.79  Aligned_cols=205  Identities=15%  Similarity=0.114  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc--cccccCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLRDWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      +..++|+||||+|+||.++++.|+++|++|++++|+.....  ..+....+..+.+|++|++++.++++       ++|+
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            45689999999999999999999999999999999743211  11122346789999999988877664       5799


Q ss_pred             EEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l  214 (399)
                      |||++|.....           ...++|+.++.++++++..    .+..+||++||...  .......|+.+|...+.+.
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  172 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT  172 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence            99999843211           1346889999888888764    35679999999754  2334568999999998766


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      +       ..|+++..++||.+............ . ...+....... .+.+.+|+|++++.++..+.  ..|+++.+.
T Consensus       173 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~i~~d  249 (255)
T PRK06841        173 KVLALEWGPYGITVNAISPTVVLTELGKKAWAGE-K-GERAKKLIPAG-RFAYPEEIAAAALFLASDAAAMITGENLVID  249 (255)
T ss_pred             HHHHHHHHhhCeEEEEEEeCcCcCcccccccchh-H-HHHHHhcCCCC-CCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            3       25899999999988765432211100 0 00011110111 47889999999999997643  368899998


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      ++.
T Consensus       250 gg~  252 (255)
T PRK06841        250 GGY  252 (255)
T ss_pred             CCc
Confidence            874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.76  E-value=2.2e-17  Score=150.86  Aligned_cols=204  Identities=11%  Similarity=0.063  Sum_probs=145.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .+..|++|||||+|+||..++++|+++|++|++++|+...    .....+..+++|++|++++.++++       .+|+|
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT----QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh----hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4556899999999999999999999999999999997511    112357889999999988887765       37999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ||++|....           ....++|+.++..+++++..    .+..+||++||....  ..+...|+.+|...+.+.+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (252)
T PRK08220         81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAK  160 (252)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHH
Confidence            999984221           12245788888888887743    445689999987653  2345789999999988763


Q ss_pred             -------hCCCCEEEEecCcccccccccchhh-hccccc------cccCCCCcceeceeHHHHHHHHHHHHhCC--ccCC
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKS------VWGTDALTRIAYMDTQDIARLTFVALRNE--KING  279 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g  279 (399)
                             ..++++++++||.+++......... ......      .+...... ..+++++|+|++++.++.+.  ...|
T Consensus       161 ~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~g  239 (252)
T PRK08220        161 CVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAVLFLASDLASHITL  239 (252)
T ss_pred             HHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHHHHHhcchhcCccC
Confidence                   2689999999999987643221110 000000      00011111 25889999999999999753  3357


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++.+.++.
T Consensus       240 ~~i~~~gg~  248 (252)
T PRK08220        240 QDIVVDGGA  248 (252)
T ss_pred             cEEEECCCe
Confidence            788887764

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.6e-17  Score=148.80  Aligned_cols=207  Identities=17%  Similarity=0.134  Sum_probs=145.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +++.|+++||||+|+||.++++.|+++|++|++++|+.++   .....+++++++|+.|++++.++++       .+|+|
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3556899999999999999999999999999999997543   1122367889999999988877764       46999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHHHc-----CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~-----~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l  214 (399)
                      ||++|..+.           +..+++|+.++..+++++...     +..+||++||.....  .....|+.+|...+.+.
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~  159 (252)
T PRK07856         80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLT  159 (252)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHH
Confidence            999984221           123468999999998887541     335899999976542  34578999999999887


Q ss_pred             Hh------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcC
Q 015872          215 QD------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSG  286 (399)
Q Consensus       215 ~~------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~  286 (399)
                      +.      ..+.+..++||.+........... ......+....... .+...+|+|++++.++..+  ...|..+.+.+
T Consensus       160 ~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~-~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        160 RSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAAVAATVPLG-RLATPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             HHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHHHhhcCCCC-CCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            43      227889999988865432211100 00000000000111 3567899999999998763  34688999988


Q ss_pred             CCCCC
Q 015872          287 PRAWT  291 (399)
Q Consensus       287 ~~~~s  291 (399)
                      +...+
T Consensus       238 g~~~~  242 (252)
T PRK07856        238 GGERP  242 (252)
T ss_pred             CcchH
Confidence            76433

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.76  E-value=2.4e-17  Score=151.26  Aligned_cols=203  Identities=16%  Similarity=0.149  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++|+||||+|+||.++++.|+++|++|++++|+.++....   +..  ..+.++++|++|++++.++++       +
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999975432211   111  246789999999988866553       5


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc-----CCcEEEEecccCCCC-C-----CCCcHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNCDK-H-----PEVPLMEI  206 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~-----~v~~~V~~Ss~~~~~-~-----~~~~y~~~  206 (399)
                      +|+|||++|....           ....++|+.++.++++++...     +..+||++||..... .     +..+|..+
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~s  169 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS  169 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHH
Confidence            8999999983211           122358999999999987654     567999999865422 1     23789999


Q ss_pred             HHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          207 KYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       207 K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      |...+.+++.       .|+++.+++|+.+...........+.+.  .. ...... .+...+|+++++..++...  ..
T Consensus       170 Ka~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~--~~-~~~~~~-~~~~~~~va~~~~~l~~~~~~~~  245 (259)
T PRK08213        170 KGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGED--LL-AHTPLG-RLGDDEDLKGAALLLASDASKHI  245 (259)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHH--HH-hcCCCC-CCcCHHHHHHHHHHHhCccccCc
Confidence            9999987743       5799999999888654332222111111  00 000111 3456799999998888653  23


Q ss_pred             CCcEEEEcCC
Q 015872          278 NGRTLTFSGP  287 (399)
Q Consensus       278 ~g~~~~l~~~  287 (399)
                      .|+.+++.++
T Consensus       246 ~G~~~~~~~~  255 (259)
T PRK08213        246 TGQILAVDGG  255 (259)
T ss_pred             cCCEEEECCC
Confidence            6888888876

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.8e-17  Score=147.86  Aligned_cols=195  Identities=16%  Similarity=0.141  Sum_probs=139.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc----CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~----~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +++++|+||||+|++|.+++++|+++|++|++++|+..+.......    .+++++++|+.|.+++.++++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3457899999999999999999999999999999975432221111    357889999999988877665       68


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      |+|||++|....           ....++|+.++..+++++...   +.+++|++||....  ......|..+|...+.+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~  163 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF  163 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            999999984321           123457888888888777542   45689999987643  23456799999988765


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEc
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFS  285 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~  285 (399)
                      .+       ..|++++++||+.+.++......     .        ......+..+|+++.++.++..+. .....+.+.
T Consensus       164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----~--------~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~  230 (237)
T PRK07326        164 SEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----S--------EKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR  230 (237)
T ss_pred             HHHHHHHhcccCcEEEEEeeccccCccccccc-----c--------hhhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence            53       36899999999988765432110     0        001123788999999999998754 234555555


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      .++
T Consensus       231 ~~~  233 (237)
T PRK07326        231 PSR  233 (237)
T ss_pred             cCC
Confidence            443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.75  E-value=2e-17  Score=150.80  Aligned_cols=189  Identities=13%  Similarity=0.075  Sum_probs=131.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~  154 (399)
                      |+|+||||+|+||.++++.|+++|++|++++|+.++......  ..+++++.+|+.|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999999999999999999997543222111  1257889999999988877664       6999999


Q ss_pred             CCCCCC----C--------CcchhccHHHHHH----HHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 015872          155 CATGRP----E--------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       155 ~a~~~~----~--------~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~  216 (399)
                      ++|...    .        ....++|+.++..    ++.++++.+.+++|++||....  ..+...|+.+|...+.+.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence            998421    0        1224578888555    4444556677899999997653  23456899999999987632


Q ss_pred             -------CCCCEEEEecCcccccccccchhhhccccc-cccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          217 -------SGLPHVIIRLCGFMQGLIGQYAVPILEEKS-VWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                             .++.+.+++||.+.+.......   +.+.. ....... ...++..+|+|++++.++..+.
T Consensus       161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVR---FKGDDGKAEKTYQ-NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHhcCCCcEEEEEeCCeecccccchhh---ccCcHHHHHhhcc-ccCCCCHHHHHHHHHHHhcCCC
Confidence                   5799999999988744332110   00000 0000001 1145788999999999997654

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.5e-17  Score=150.88  Aligned_cols=206  Identities=13%  Similarity=0.089  Sum_probs=140.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+..+........+..++++|++|++++.++++       ++|+||
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5568999999999999999999999999999999975433222222344788999999988877775       579999


Q ss_pred             ECCCCCCC-------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccC-CCC--CCCCcHHHHHHHHHHH
Q 015872          154 DCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHN-CDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       154 ~~a~~~~~-------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~-~~~--~~~~~y~~~K~~~E~~  213 (399)
                      |++|...+             +...++|+.++..+++.+    ++.+..++|++||.. ...  .+...|+.+|...+.+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~  164 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM  164 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence            99984321             122347888876666655    344556899998854 332  2456799999877765


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccc-cccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLT  283 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~  283 (399)
                      .+       ..|+++++++||++.++........-... ......-+.  -.+.+++|+++++..++.+.  ...|..+.
T Consensus       165 ~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  242 (255)
T PRK06057        165 SRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM--GRFAEPEEIAAAVAFLASDDASFITASTFL  242 (255)
T ss_pred             HHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            43       35899999999999865543221100000 000000001  14788999999998888653  23577888


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.++.
T Consensus       243 ~~~g~  247 (255)
T PRK06057        243 VDGGI  247 (255)
T ss_pred             ECCCe
Confidence            87653

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.6e-17  Score=151.90  Aligned_cols=207  Identities=13%  Similarity=0.110  Sum_probs=147.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ..++.|+|+||||+|+||.+++++|+++|++|+++.|+..+...    .+..  .++.++.+|++|.+.+.++++     
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35567899999999999999999999999999999987533211    1111  246789999999988877664     


Q ss_pred             --CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 --GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                        ++|+|||+||....            ....++|+.++.++++++...  ...+||++||...+.  .....|+.+|..
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a  201 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGA  201 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHH
Confidence              58999999984211            123468999999999988753  225899999976542  334679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+.+       ..|++++.++||.+...........  .....+....... .+.+++|+|++++.++.+..  ..|.
T Consensus       202 ~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~dva~~~~~ll~~~~~~~~G~  278 (290)
T PRK06701        202 IHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE--EKVSQFGSNTPMQ-RPGQPEELAPAYVFLASPDSSYITGQ  278 (290)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCH--HHHHHHHhcCCcC-CCcCHHHHHHHHHHHcCcccCCccCc
Confidence            987763       2589999999998886543221100  0000111111222 57889999999999998743  3688


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++++.++.
T Consensus       279 ~i~idgg~  286 (290)
T PRK06701        279 MLHVNGGV  286 (290)
T ss_pred             EEEeCCCc
Confidence            99998764

>PRK05717 oxidoreductase; Validated

Probab=99.75  E-value=3.1e-17  Score=150.27  Aligned_cols=205  Identities=14%  Similarity=0.098  Sum_probs=142.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ..++|+|+||||+|+||+++++.|+++|++|++++|+..+.......  ..+.++++|++|.+++.++++       .+|
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            34568899999999999999999999999999999875433221111  247789999999888765543       479


Q ss_pred             EEEECCCCCCC-------------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||+||....             ....++|+.++.++++++...   ...++|++||.....  .....|+.+|...+.
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  166 (255)
T PRK05717         87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLA  166 (255)
T ss_pred             EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            99999994321             134568999999999998642   235899999876532  345689999999998


Q ss_pred             HHHh------CCCCEEEEecCcccccccccc-hhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQD------SGLPHVIIRLCGFMQGLIGQY-AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~~------~g~~~~ilRp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+.      .++++..++||++.+...... .........  ...+..  .+.+.+|+|.++..++.+..  ..|+++.
T Consensus       167 ~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~va~~~~~l~~~~~~~~~g~~~~  242 (255)
T PRK05717        167 LTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADH--AQHPAG--RVGTVEDVAAMVAWLLSRQAGFVTGQEFV  242 (255)
T ss_pred             HHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHh--hcCCCC--CCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence            7642      358899999999876532211 000000000  000111  46788999999998886532  3578888


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.++.
T Consensus       243 ~~gg~  247 (255)
T PRK05717        243 VDGGM  247 (255)
T ss_pred             ECCCc
Confidence            87653

>PRK08017 oxidoreductase; Provisional

Probab=99.75  E-value=3.5e-17  Score=149.86  Aligned_cols=192  Identities=17%  Similarity=0.145  Sum_probs=136.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--------CCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--------GVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--------~~d~Vi~  154 (399)
                      +++|+||||+|+||.++++.|+++|++|++++|+.++. +.+...+++.+++|+.|.+++..+++        .+|.+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh-HHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            36799999999999999999999999999999975433 22334478899999999877665542        4689999


Q ss_pred             CCCCCCC-----------CcchhccHHHHHHH----HHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH---
Q 015872          155 CATGRPE-----------EPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL---  214 (399)
Q Consensus       155 ~a~~~~~-----------~~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l---  214 (399)
                      ++|....           +...++|+.++.++    ++++++.+.+++|++||....  .....+|+.+|...|.+.   
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l  160 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDAL  160 (256)
T ss_pred             CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHH
Confidence            9984221           12345777777664    677777788899999986432  334567999999999764   


Q ss_pred             ----HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          215 ----QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       215 ----~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                          ...++++++++||.+...+..... ........... +.....+++++|+++++..+++++..
T Consensus       161 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        161 RMELRHSGIKVSLIEPGPIRTRFTDNVN-QTQSDKPVENP-GIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHhhcCCEEEEEeCCCcccchhhccc-chhhccchhhh-HHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence                346899999999887654432211 11111111111 12223579999999999999987654

>PRK06128 oxidoreductase; Provisional

Probab=99.75  E-value=6.4e-17  Score=151.79  Aligned_cols=207  Identities=14%  Similarity=0.127  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-c----ccccc--CCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-A----DFLRD--WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~----~~l~~--~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+||||||+|+||.++++.|+++|++|++..++.+.. .    ..+..  ..+.++.+|++|.+++.++++     
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            35568999999999999999999999999999887753321 1    11211  246788999999988776654     


Q ss_pred             --CCCEEEECCCCCC------------CCcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 --GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 --~~d~Vi~~a~~~~------------~~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                        ++|+|||+||...            ....+++|+.++..+++++...  .-.+||++||...+.  .....|+.+|..
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a  211 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA  211 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence              6899999998321            1123468999999999998754  124899999987653  234579999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      .+.+.+       ..|+++.+++||.+.+.......  ....   ..+......+ .+...+|+|.+++.++.+..  ..
T Consensus       212 ~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~---~~~~~~~p~~-r~~~p~dva~~~~~l~s~~~~~~~  287 (300)
T PRK06128        212 IVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKI---PDFGSETPMK-RPGQPVEMAPLYVLLASQESSYVT  287 (300)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHH---HHHhcCCCCC-CCcCHHHHHHHHHHHhCccccCcc
Confidence            998763       26899999999999866432110  0000   1111111112 46788999999999887643  35


Q ss_pred             CcEEEEcCCCCC
Q 015872          279 GRTLTFSGPRAW  290 (399)
Q Consensus       279 g~~~~l~~~~~~  290 (399)
                      |++|++.++..+
T Consensus       288 G~~~~v~gg~~~  299 (300)
T PRK06128        288 GEVFGVTGGLLL  299 (300)
T ss_pred             CcEEeeCCCEeC
Confidence            899999998654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.3e-17  Score=150.67  Aligned_cols=189  Identities=16%  Similarity=0.165  Sum_probs=135.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++||||||+|+||.++++.|+++|++|++++|+..+....   +.  ..++.++.+|+.|.+++..+++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999974432211   11  1257788999999988877765       6899


Q ss_pred             EEECCCCCCC---C---------cchhccHHHHHHHHHHHHH---cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE---E---------PIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~---~---------~~~~~n~~~~~~l~~aa~~---~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||++|....   .         ...++|+.++.++++.+..   .+..++|++||....  ..+...|+.+|...+.+.
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~  161 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFF  161 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHHH
Confidence            9999983221   1         1246899999999888753   234689999987653  334578999999999876


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +       ..++++++++||.+...........  .+......+.... .+++++|+|++++.+++..
T Consensus       162 ~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        162 DSLRIELADDGVAVTVVCPGFVATDIRKRALDG--DGKPLGKSPMQES-KIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHhhhcCceEEEEecCccccCcchhhccc--ccccccccccccc-CCCCHHHHHHHHHHHhhCC
Confidence            3       3689999999999876543322110  1111111111222 6899999999999999854

>PRK06196 oxidoreductase; Provisional

Probab=99.75  E-value=3.4e-17  Score=154.72  Aligned_cols=196  Identities=18%  Similarity=0.130  Sum_probs=132.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .+..++|+||||+|+||.+++++|+++|++|++++|+.++..+.... .++.++++|++|.+++.++++       ++|+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            34568999999999999999999999999999999985433222211 247899999999988877663       5899


Q ss_pred             EEECCCCCC---------CCcchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--------------CCCCcHH
Q 015872          152 VIDCATGRP---------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLM  204 (399)
Q Consensus       152 Vi~~a~~~~---------~~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~~~y~  204 (399)
                      |||+||...         .+..+++|+.++..    ++..+++.+..++|++||.+...              .+...|+
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            999998321         12234688888654    44455566657999999875321              1224699


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcce--eceeHHHHHHHHHHHHhCC
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRI--AYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~Dva~~i~~~l~~~  275 (399)
                      .+|...+.+.+       +.|+++++++||++.+++...+....... ..+.......+  .+...+|+|..++.++..+
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  261 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA-LGWVDEHGNPIDPGFKTPAQGAATQVWAATSP  261 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh-hhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCC
Confidence            99999887652       35899999999999876543221100000 00100000001  2457799999999998764


Q ss_pred             c
Q 015872          276 K  276 (399)
Q Consensus       276 ~  276 (399)
                      .
T Consensus       262 ~  262 (315)
T PRK06196        262 Q  262 (315)
T ss_pred             c
Confidence            3

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.4e-17  Score=149.16  Aligned_cols=201  Identities=15%  Similarity=0.110  Sum_probs=137.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .+.|+||||+|+||.+++++|+++|++|++..++.+....    .+..  ..+.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            3679999999999999999999999998887754332111    1211  246789999999988877765       58


Q ss_pred             CEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHcC-------CcEEEEecccCC-CCCCC--CcHHHHH
Q 015872          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAMG-------IQKYVFYSIHNC-DKHPE--VPLMEIK  207 (399)
Q Consensus       150 d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~~-------v~~~V~~Ss~~~-~~~~~--~~y~~~K  207 (399)
                      |+|||++|....            ....++|+.++.++++++.+.-       -.++|++||... ...+.  ..|+.+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999984321            1225688999988888775431       136899998754 33332  4699999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ...+.+++       ..|++++++||+.+++........+ ....   +....... -+.+++|++++++.++....  .
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~---~~~~~p~~-~~~~~~d~a~~~~~l~~~~~~~~  237 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDR---VKAGIPMG-RGGTAEEVARAILWLLSDEASYT  237 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHH---HHhcCCCC-CCcCHHHHHHHHHHHhCccccCc
Confidence            99998763       2489999999999987643211100 0000   00000111 13477999999999887642  4


Q ss_pred             CCcEEEEcCC
Q 015872          278 NGRTLTFSGP  287 (399)
Q Consensus       278 ~g~~~~l~~~  287 (399)
                      .|++|++.++
T Consensus       238 ~g~~~~~~gg  247 (248)
T PRK06123        238 TGTFIDVSGG  247 (248)
T ss_pred             cCCEEeecCC
Confidence            6889999875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.75  E-value=1.6e-17  Score=144.75  Aligned_cols=191  Identities=13%  Similarity=0.109  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCC---cEEEEccCCCCCcHHHHh-------cCCCE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG---ATVVNADLSKPETIPATL-------VGVHT  151 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~---v~~~~~Dl~d~~~l~~~~-------~~~d~  151 (399)
                      ..|.|+|||||+.||.++++.|++.|++|++..|+.+.....-.+.+   +..+..|++|.+++.+++       ..+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            34789999999999999999999999999999998554433222233   788999999998865554       36999


Q ss_pred             EEECCCCCC-----------CCcchhccHHHHHHHHHH----HHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      +||+||...           +....++|+.|..+...+    +.+.+-.++|.+||.+..  ......|+.+|..+..+.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs  164 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS  164 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence            999999322           334457898888775554    456666699999998752  334578999999998765


Q ss_pred             ---H----hCCCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          215 ---Q----DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       215 ---~----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                         +    ..+++++.+-||.+-+..+...-..--...  .++     ....++..+|+|+++..+++.|.+
T Consensus       165 ~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y-----~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         165 LGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY-----KGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh-----ccCCCCCHHHHHHHHHHHHhCCCc
Confidence               2    268999999999885443322111100000  111     122678889999999999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=2.8e-17  Score=149.54  Aligned_cols=204  Identities=18%  Similarity=0.167  Sum_probs=142.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++++|+||||+|+||.++++.|+++|++|+++ .|+.++....   +.  ...+.++.+|++|++++.++++       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            456799999999999999999999999999999 8864432111   11  1247889999999998877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      ++|+|||++|....           +...++|+.+..++++++..    .+.++||++||....  ......|+.+|...
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~  162 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV  162 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence            79999999984321           12345788887777776653    456689999987542  23456799999888


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+++       ..|++++.++||.+..+...........  . +...... ..+...+|++++++.++...  ...|+.
T Consensus       163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKE--G-LAEEIPL-GRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHH--H-HHhcCCC-CCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            76652       3689999999998865443322111000  0 0001111 14668899999999999763  346888


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +++.++.
T Consensus       239 ~~~~~~~  245 (247)
T PRK05565        239 ITVDGGW  245 (247)
T ss_pred             EEecCCc
Confidence            8888763

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3e-17  Score=150.90  Aligned_cols=206  Identities=13%  Similarity=0.111  Sum_probs=142.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.++++||||+|.||.++++.|+++|++|++++|+.++..+....  .++.++++|++|++++.++++       .+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4568999999999999999999999999999999985433222222  247889999999988877664       5799


Q ss_pred             EEECCCCCCC----------CcchhccHHHHHHHHHHHHH---cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 015872          152 VIDCATGRPE----------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       152 Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~~---~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~  216 (399)
                      |||++|....          ....++|+.++..+++++..   .+-.++|++||....  ......|+.+|...+.+.+.
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  163 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRS  163 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHH
Confidence            9999984211          12235788888887776653   233589999987542  23456799999999887642


Q ss_pred             -------CCCCEEEEecCcccccccccchhhhccc-ccccc-CCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEc
Q 015872          217 -------SGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVWG-TDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFS  285 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~  285 (399)
                             .|+++..++||.+...+........... ..+.. ..+..  .+...+|+|++++.++..+  ...|..+.+.
T Consensus       164 la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva~~~~~l~s~~~~~~tG~~i~vd  241 (261)
T PRK08265        164 MAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLG--RVGDPEEVAQVVAFLCSDAASFVTGADYAVD  241 (261)
T ss_pred             HHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCC--CccCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence                   5899999999988755432211000000 00000 00111  3567899999999999763  3467888888


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      ++.
T Consensus       242 gg~  244 (261)
T PRK08265        242 GGY  244 (261)
T ss_pred             CCe
Confidence            863

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.8e-17  Score=149.80  Aligned_cols=179  Identities=18%  Similarity=0.162  Sum_probs=130.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccC-CcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW-GATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      +|+|+||||+|+||.++++.|+++|++|++++|+.+.....   +... ++.++++|++|++++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47899999999999999999999999999999975432211   1111 57889999999988877664       3799


Q ss_pred             EEECCCCCCC------------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPE------------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~------------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      |||++|....            ....++|+.++..+++    ++++.+..+||++||....  ......|+.+|...+.+
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY  161 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence            9999983211            1124588888887665    5566667799999986542  23456799999999987


Q ss_pred             H-------HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          214 L-------QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       214 l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .       +..|+++++++||.+.++.....         .+    ... .++..+|+|+.++.++.++
T Consensus       162 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~----~~~-~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        162 LESLRVELRPAGVRVVTIAPGYIRTPMTAHN---------PY----PMP-FLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHhhccCcEEEEEecCCCcCchhhcC---------CC----CCC-CccCHHHHHHHHHHHHhCC
Confidence            6       34689999999999876532110         00    001 2357899999999999764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.74  E-value=2.3e-17  Score=150.32  Aligned_cols=205  Identities=17%  Similarity=0.110  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|++++|+.... ...+..  ..+.++++|++|.+++..+++       ++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568999999999999999999999999999999864211 111222  247889999999988876653       589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||++|....           +...++|+.+..++++++..    .+ ..++|++||.....  .....|+.+|...+.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            99999984321           12245888888888887753    23 35899999875432  235679999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+.       .|++++.++||.+..+..................- .. ..++..+|+|++++.++....  ..|.++.
T Consensus       163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  240 (248)
T TIGR01832       163 LTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERI-PA-GRWGTPDDIGGPAVFLASSASDYVNGYTLA  240 (248)
T ss_pred             HHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC-CC-CCCcCHHHHHHHHHHHcCccccCcCCcEEE
Confidence            7632       48999999999887654322110000000000000 11 258889999999999997633  3577777


Q ss_pred             EcCC
Q 015872          284 FSGP  287 (399)
Q Consensus       284 l~~~  287 (399)
                      +.++
T Consensus       241 ~dgg  244 (248)
T TIGR01832       241 VDGG  244 (248)
T ss_pred             eCCC
Confidence            7765

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06398 aldose dehydrogenase; Validated

Probab=99.74  E-value=7.2e-17  Score=148.11  Aligned_cols=201  Identities=14%  Similarity=0.155  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+....      ..+.++++|++|++++.++++       .+|+||
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4568999999999999999999999999999999975432      257889999999988877664       589999


Q ss_pred             ECCCCCC--------CC---cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 015872          154 DCATGRP--------EE---PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       154 ~~a~~~~--------~~---~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~  216 (399)
                      |+||...        .+   ...++|+.++..+++++..    .+..++|++||....  ..+...|+.+|...+.+.+.
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~  157 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRS  157 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHH
Confidence            9998321        11   1246899998888777643    455699999997654  33557899999999987643


Q ss_pred             ------CCCCEEEEecCcccccccccchhhh-------ccc-cccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          217 ------SGLPHVIIRLCGFMQGLIGQYAVPI-------LEE-KSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       217 ------~g~~~~ilRp~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                            .++++..++||.+............       ... ...+....... .+...+|+|++++.++...  ...|+
T Consensus       158 la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~eva~~~~~l~s~~~~~~~G~  236 (258)
T PRK06398        158 IAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMK-RVGKPEEVAYVVAFLASDLASFITGE  236 (258)
T ss_pred             HHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcC-CCcCHHHHHHHHHHHcCcccCCCCCc
Confidence                  2488999999988655432211000       000 00011110111 3567899999999998753  24678


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++.+.++.
T Consensus       237 ~i~~dgg~  244 (258)
T PRK06398        237 CVTVDGGL  244 (258)
T ss_pred             EEEECCcc
Confidence            88888764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.9e-17  Score=148.64  Aligned_cols=204  Identities=19%  Similarity=0.150  Sum_probs=142.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++|+||||+|+||.++++.|+++|++|++++|+.++....   +.  ..++.++.+|++|++++.++++       +
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4568899999999999999999999999999999974432211   11  1257789999999988876654       6


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH-----cCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA-----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~-----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      +|+|||+||....           .....+|+.++.++++++..     .+..+||++||...  ...+..+|+.+|..+
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  167 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL  167 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHH
Confidence            8999999983211           12235889999999999864     34568999999754  344567899999999


Q ss_pred             HHHHHh------CCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQD------SGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~~------~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+.+.      .+++++.++||.+.......... ..... .+.... ... .+...+|+|++++.++.+.  ...|+.
T Consensus       168 ~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~va~~~~~l~~~~~~~~~g~~  244 (263)
T PRK07814        168 AHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRA-PMEKAT-PLR-RLGDPEDIAAAAVYLASPAGSYLTGKT  244 (263)
T ss_pred             HHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHH-HHHhcC-CCC-CCcCHHHHHHHHHHHcCccccCcCCCE
Confidence            987743      35788999998886543321100 00000 011100 111 3567899999999999763  235778


Q ss_pred             EEEcCC
Q 015872          282 LTFSGP  287 (399)
Q Consensus       282 ~~l~~~  287 (399)
                      +.+.++
T Consensus       245 ~~~~~~  250 (263)
T PRK07814        245 LEVDGG  250 (263)
T ss_pred             EEECCC
Confidence            888765

>PRK08643 acetoin reductase; Validated

Probab=99.74  E-value=9.5e-17  Score=147.03  Aligned_cols=205  Identities=18%  Similarity=0.198  Sum_probs=140.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +|+++||||+|+||.++++.|+++|++|++++|+.+.....   +..  .++.++++|++|++++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999975432221   111  256789999999988777664       589


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCC-C-CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD-K-HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~-~-~~~~~y~~~K~~~E~  212 (399)
                      +|||++|..+..           ...++|+.++..+++++..    .+ -.++|++||.... . .....|+.+|...+.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            999999843221           2235788887766666543    22 2489999987543 2 334679999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhcc---cccc-----ccCCCCcceeceeHHHHHHHHHHHHhCC--
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE---EKSV-----WGTDALTRIAYMDTQDIARLTFVALRNE--  275 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~v~v~Dva~~i~~~l~~~--  275 (399)
                      +.+       ..|++++.++||.+..............   ....     +...-... .+...+|+|.++..++...  
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLG-RLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCC-CCcCHHHHHHHHHHHhCcccc
Confidence            653       3689999999998876543321111000   0000     00000111 3567899999999998754  


Q ss_pred             ccCCcEEEEcCCC
Q 015872          276 KINGRTLTFSGPR  288 (399)
Q Consensus       276 ~~~g~~~~l~~~~  288 (399)
                      ...|.++.+.++.
T Consensus       241 ~~~G~~i~vdgg~  253 (256)
T PRK08643        241 YITGQTIIVDGGM  253 (256)
T ss_pred             CccCcEEEeCCCe
Confidence            3468888888764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.74  E-value=5.8e-17  Score=146.76  Aligned_cols=176  Identities=18%  Similarity=0.144  Sum_probs=133.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a  156 (399)
                      +..++|+||||+|+||+++++.|+++|+ +|++++|+..+...  ...++.++.+|+.|.+++.++++   .+|+|||++
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   81 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNA   81 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            4457899999999999999999999998 99999998554332  23468899999999999888776   489999999


Q ss_pred             CC-CCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH---
Q 015872          157 TG-RPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ---  215 (399)
Q Consensus       157 ~~-~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~---  215 (399)
                      |. ....           ...++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...|.+.+   
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~  161 (238)
T PRK08264         82 GIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALR  161 (238)
T ss_pred             CcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHH
Confidence            85 2211           123578888888888765    34567899999876543  345679999999987663   


Q ss_pred             ----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          216 ----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       216 ----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                          ..+++++++||+.+........                 ....+..+|+++.++..+..+
T Consensus       162 ~~~~~~~i~~~~v~pg~v~t~~~~~~-----------------~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        162 AELAPQGTRVLGVHPGPIDTDMAAGL-----------------DAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HHhhhcCeEEEEEeCCcccccccccC-----------------CcCCCCHHHHHHHHHHHHhCC
Confidence                2489999999988865432110                 012577799999999998864

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5e-17  Score=148.72  Aligned_cols=206  Identities=15%  Similarity=0.106  Sum_probs=140.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++++||||+|.||.++++.|+++|++|++++|+.++....   +..  .++.++.+|++|++++.++++       .
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4467899999999999999999999999999999975432221   111  247789999999988877764       6


Q ss_pred             CCEEEECCCCCCC------------CcchhccHHHHHHH----HHHHHHcCCcEEEEecccCCC---CCCCCcHHHHHHH
Q 015872          149 VHTVIDCATGRPE------------EPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCD---KHPEVPLMEIKYC  209 (399)
Q Consensus       149 ~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~---~~~~~~y~~~K~~  209 (399)
                      +|+|||+||....            ...+++|+.+...+    +..+++.+..++|++||....   ......|+.+|..
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  163 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAG  163 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHH
Confidence            8999999984211            12246787766555    445555566789999997543   3345689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+.+       ..|+++..++||.+.......+... .............. .+...+|+|++++.++.++.  ..|+
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~  241 (254)
T PRK07478        164 LIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-PEALAFVAGLHALK-RMAQPEEIAQAALFLASDAASFVTGT  241 (254)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-HHHHHHHHhcCCCC-CCcCHHHHHHHHHHHcCchhcCCCCC
Confidence            987763       2579999999998875533221100 00000000000111 35678999999999987643  3678


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++.+.++.
T Consensus       242 ~~~~dgg~  249 (254)
T PRK07478        242 ALLVDGGV  249 (254)
T ss_pred             eEEeCCch
Confidence            88887763

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.2e-17  Score=150.04  Aligned_cols=190  Identities=16%  Similarity=0.125  Sum_probs=131.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      |+|+||||+|+||.+++++|+++|++|++++|+.++....   +.  ...+.++++|+.|++++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999975442221   11  1257789999999888777664       6899


Q ss_pred             EEECCCCCCCC-----------cchhccHHHHHHHHH----HHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPEE-----------PIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||++|.....           ...++|+.++..+.+    .+++.+..+||++||....  ......|+.+|...+.+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            99999943211           123577776666544    4566677899999987543  334568999999987664


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +       ..|+++++++|+.+..+.................  ......+++++|+|+.++.+++++
T Consensus       161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVG--KLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHH--HHhhcCCCCHHHHHHHHHHHHhCC
Confidence            2       3689999999999876644322111000000000  001124678999999999999864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.74  E-value=7.6e-17  Score=146.53  Aligned_cols=203  Identities=16%  Similarity=0.146  Sum_probs=141.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +++|+||||+|+||+++++.|+++|++|++++|+.....+.+    .  ...+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999743211111    1  1247889999999988877664       48


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHH----HHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~----~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |+|||++|.....           ...++|+.+..++.    +.+++.+..+||++||....  ......|..+|...+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            9999999843211           22357888877764    45566667799999987653  2345679999998887


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +++       ..++++++++|+.+.++...........   .+......+ .+...+|+++++..++....  ..|++++
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQ---SIVNQIPMK-RLGTPEEIAAAVAFLVSEAAGFITGETIS  237 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHH---HHHhcCCCC-CCCCHHHHHHHHHHHcCccccCccCcEEE
Confidence            653       3589999999999876543221111100   011111111 46678999999998886532  3689999


Q ss_pred             EcCCCC
Q 015872          284 FSGPRA  289 (399)
Q Consensus       284 l~~~~~  289 (399)
                      +.++..
T Consensus       238 ~~~g~~  243 (245)
T PRK12824        238 INGGLY  243 (245)
T ss_pred             ECCCee
Confidence            998753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=4.3e-17  Score=148.94  Aligned_cols=204  Identities=16%  Similarity=0.135  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc---cCCcEEEEccCCCCCcHHHHhc-------C-CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLV-------G-VH  150 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~---~~~v~~~~~Dl~d~~~l~~~~~-------~-~d  150 (399)
                      +.|+|+||||+|+||+++++.|+++|++|++..++..+..+.+.   ..++.++++|+.|++++.++++       . +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            45789999999999999999999999999987764333221111   1257889999999988877764       2 89


Q ss_pred             EEEECCCCCC------C-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHH
Q 015872          151 TVIDCATGRP------E-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       151 ~Vi~~a~~~~------~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                      +|||++|...      .           ....++|+.++.++++++.    +.+..++|++||....  ..+..+|+.+|
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  163 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAK  163 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHH
Confidence            9999997310      0           1125688999989888875    3455689999986543  23457899999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ...+.+++.       .|+++..++||.+...............  .+...... ..+.+.+|+|++++.++..+  ...
T Consensus       164 ~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  240 (253)
T PRK08642        164 AALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFD--LIAATTPL-RKVTTPQEFADAVLFFASPWARAVT  240 (253)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHH--HHHhcCCc-CCCCCHHHHHHHHHHHcCchhcCcc
Confidence            999988743       5799999999888653221110000000  00000011 14788899999999999753  346


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+.+.+.++.
T Consensus       241 G~~~~vdgg~  250 (253)
T PRK08642        241 GQNLVVDGGL  250 (253)
T ss_pred             CCEEEeCCCe
Confidence            8888888763

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.73  E-value=1.2e-16  Score=145.23  Aligned_cols=204  Identities=14%  Similarity=0.112  Sum_probs=141.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHh-------cCCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATL-------VGVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~-------~~~d~  151 (399)
                      ++.++++||||+|+||.++++.|+++|+.|.+..|+.++......  ..+++++.+|++|.+++.+++       .++|+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            456899999999999999999999999999888886443322111  125788999999998887664       35899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||++|....           +...++|+.+..++++++.+    .+.++||++||....  ......|+.+|...+.+.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~  163 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFS  163 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHH
Confidence            9999984321           22346888888888777643    356789999996432  234567999999877665


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      +       ..+++++.++|+.+......... ..... ...... .. ..+.+.+|++++++.++..+.  ..|+++++.
T Consensus       164 ~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~-~~~~~~-~~-~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12936        164 KSLAQEIATRNVTVNCVAPGFIESAMTGKLN-DKQKE-AIMGAI-PM-KRMGTGAEVASAVAYLASSEAAYVTGQTIHVN  239 (245)
T ss_pred             HHHHHHhhHhCeEEEEEEECcCcCchhcccC-hHHHH-HHhcCC-CC-CCCcCHHHHHHHHHHHcCccccCcCCCEEEEC
Confidence            3       35899999999987654432211 11000 000000 11 135678999999998886543  258899998


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      ++.
T Consensus       240 ~g~  242 (245)
T PRK12936        240 GGM  242 (245)
T ss_pred             CCc
Confidence            863

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.1e-17  Score=146.96  Aligned_cols=202  Identities=18%  Similarity=0.134  Sum_probs=142.0

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc---CCCEEEECCCCC
Q 015872           87 LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV---GVHTVIDCATGR  159 (399)
Q Consensus        87 lVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~~~  159 (399)
                      +||||+|+||..+++.|+++|++|++++|+.+.......    ..+++++.+|++|++++.++++   .+|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            599999999999999999999999999997443221111    2357889999999999988886   479999999842


Q ss_pred             CC-----------CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-----CCCCE
Q 015872          160 PE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-----SGLPH  221 (399)
Q Consensus       160 ~~-----------~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~-----~g~~~  221 (399)
                      ..           ....++|+.++.+++++....+..+||++||.+..  ..+...|+.+|...+.+.+.     .++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~irv  160 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAPVRV  160 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhCceE
Confidence            21           12235788899899886665566799999988764  23456799999999988754     35788


Q ss_pred             EEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCC
Q 015872          222 VIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRA  289 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~  289 (399)
                      +.++|+.+..+............. .......... .+...+|+|++++.++.++...|++|++.+++.
T Consensus       161 ~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~~  228 (230)
T PRK07041        161 NTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPAR-RVGQPEDVANAILFLAANGFTTGSTVLVDGGHA  228 (230)
T ss_pred             EEEeecccccHHHHhhhccchHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCee
Confidence            999998776543221100000000 0000000111 245679999999999987666789999998754

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.8e-17  Score=148.14  Aligned_cols=208  Identities=14%  Similarity=0.114  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc-------ccc--cCCcEEEEccCCCCCcHHHHhc----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-------FLR--DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~-------~l~--~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ++.++++||||+|+||.++++.|+++|++|++++++......       .+.  ...+.++++|++|++++.++++    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            445899999999999999999999999998888765332111       111  1247789999999988877764    


Q ss_pred             ---CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEe-ccc-CCCCCCCCcHHHHHHH
Q 015872          148 ---GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFY-SIH-NCDKHPEVPLMEIKYC  209 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~-Ss~-~~~~~~~~~y~~~K~~  209 (399)
                         ++|+|||+||....           +...++|+.++..+++++...-  ..+++++ ||. +.+......|+.+|..
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a  165 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAP  165 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHH
Confidence               58999999984211           1123579999988888886531  2356654 443 4455556789999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhh-cccccccc-CCCCcceeceeHHHHHHHHHHHHhCCc-cCC
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPI-LEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEK-ING  279 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g  279 (399)
                      +|.+.+.       .|++++.++||.+...........- ........ ..+.....+.+++|+|.++..++.... ..|
T Consensus       166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g  245 (257)
T PRK12744        166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITG  245 (257)
T ss_pred             HHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcccceeec
Confidence            9988743       4799999999998755332110000 00000000 001111247889999999999998532 258


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++++.++.
T Consensus       246 ~~~~~~gg~  254 (257)
T PRK12744        246 QTILINGGY  254 (257)
T ss_pred             ceEeecCCc
Confidence            899998874

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.73  E-value=3e-16  Score=134.22  Aligned_cols=278  Identities=17%  Similarity=0.188  Sum_probs=192.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEe-cCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~-r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~  157 (399)
                      ...+|||||+-|.+|..+++.|-.+ |.+-.++. ..+++  ..... .-.++-.|+.|...+.+++-  .+|.+||+.+
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~~-~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSA  119 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVTD-VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSA  119 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhcc-cCCchhhhhhccccHHHhhcccccceeeeHHH
Confidence            3468999999999999999988876 75544443 32222  11111 33567889999999998874  5999999875


Q ss_pred             ------CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--------------CCCCCcHHHHHHHHHHH---H
Q 015872          158 ------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQF---L  214 (399)
Q Consensus       158 ------~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--------------~~~~~~y~~~K~~~E~~---l  214 (399)
                            +.+-....++|+.|..|+++.|++++.+-|| -|+.++.              ..|...|+.+|..+|-+   .
T Consensus       120 LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~  198 (366)
T KOG2774|consen  120 LLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYF  198 (366)
T ss_pred             HHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHH
Confidence                  4555666789999999999999999985555 6766652              12345699999999843   2


Q ss_pred             -HhCCCCEEEEecCccccc-----ccccc----hhhhc-cccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          215 -QDSGLPHVIIRLCGFMQG-----LIGQY----AVPIL-EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       215 -~~~g~~~~ilRp~~~~~~-----~~~~~----~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                       .+.|+++-.+|.++++.+     ....+    +..++ +|+..-.-.++++++++|..|+-++++..+..+.  -..++
T Consensus       199 ~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~  278 (366)
T KOG2774|consen  199 NHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRT  278 (366)
T ss_pred             HhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhhe
Confidence             468999999999888732     22222    23333 3332233346899999999999999999998754  34579


Q ss_pred             EEEcCCCCCCHHHHHHHHHHHhC-CCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          282 LTFSGPRAWTTQEVITLCERLAG-QDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      ||+++ -.+|.+|+++.+.+.+. .++.+......                          ........+.|.+.++++.
T Consensus       279 ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~srq--------------------------~iad~wp~~~dds~ar~~w  331 (366)
T KOG2774|consen  279 YNVTG-FSFTPEEIADAIRRVMPGFEIDYDICTRQ--------------------------SIADSWPMSLDDSEARTEW  331 (366)
T ss_pred             eeece-eccCHHHHHHHHHhhCCCceeecccchhh--------------------------hhhhhcccccCchhHhhHH
Confidence            99998 47999999999998863 33333222111                          1112222346778888999


Q ss_pred             CCCCCccccHHHHHHHHHHHHHHhhHHHhhhc
Q 015872          361 GVDAKDIITLEKYLQDYFTNILKKLKDLKAQS  392 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~~~~~~~~~~  392 (399)
                      .|+-+  ..+-..+.-.+.-.+.++..++.++
T Consensus       332 h~~h~--~~l~~~i~~~i~~~~~n~~~~~p~~  361 (366)
T KOG2774|consen  332 HEKHS--LHLLSIISTVVAVHKSNLKLLKPQL  361 (366)
T ss_pred             HHhhh--hhHHHHHHHHHHHHHhhhhhcChhh
Confidence            88887  5666666666666666666666544

>PRK12743 oxidoreductase; Provisional

Probab=99.73  E-value=1.2e-16  Score=146.46  Aligned_cols=203  Identities=15%  Similarity=0.101  Sum_probs=141.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +++|+||||+|+||.+++++|+++|++|+++.|+..+..+    .+..  ..+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999988765333221    1221  247889999999988766654       58


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      |+|||++|....           .....+|+.+...+++++...-     -.+||++||....  ..+...|+.+|...+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  161 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG  161 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence            999999984321           1224588999999988776532     2489999987643  334568999999998


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+++       ..|++++.++||.+...............  .....+..  .+.+.+|++.++..++....  ..|.++
T Consensus       162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~--~~~~~~~~--~~~~~~dva~~~~~l~~~~~~~~~G~~~  237 (256)
T PRK12743        162 GLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPD--SRPGIPLG--RPGDTHEIASLVAWLCSEGASYTTGQSL  237 (256)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHH--HHhcCCCC--CCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence            7763       35799999999988865432111000000  00000011  24578999999999987643  368888


Q ss_pred             EEcCCCC
Q 015872          283 TFSGPRA  289 (399)
Q Consensus       283 ~l~~~~~  289 (399)
                      .+.++..
T Consensus       238 ~~dgg~~  244 (256)
T PRK12743        238 IVDGGFM  244 (256)
T ss_pred             EECCCcc
Confidence            8888743

>PRK12742 oxidoreductase; Provisional

Probab=99.73  E-value=5.6e-17  Score=146.73  Aligned_cols=202  Identities=15%  Similarity=0.149  Sum_probs=140.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHhc---CCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a  156 (399)
                      ++.++|+||||+|.||.++++.|+++|++|+++.|+..+..+.+ ...+++++.+|++|.+++.+.++   .+|+|||++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            45689999999999999999999999999998876433322222 23367888999999888777664   489999999


Q ss_pred             CCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC---CCCCCcHHHHHHHHHHHHH-----
Q 015872          157 TGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFLQ-----  215 (399)
Q Consensus       157 ~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~E~~l~-----  215 (399)
                      |....           +...++|+.++..++..+...  +..++|++||....   ..+...|+.+|...+.+++     
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~  163 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARD  163 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHH
Confidence            83211           123457888888876555543  23589999987653   2456789999999998763     


Q ss_pred             --hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          216 --DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                        ..|+++++++||.+........ .+..+  ...... ... .+...+|+++++..++.+..  ..|..+.+.++
T Consensus       164 ~~~~gi~v~~v~Pg~~~t~~~~~~-~~~~~--~~~~~~-~~~-~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        164 FGPRGITINVVQPGPIDTDANPAN-GPMKD--MMHSFM-AIK-RHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HhhhCeEEEEEecCcccCCccccc-cHHHH--HHHhcC-CCC-CCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence              3679999999998875442211 00000  000000 111 35678999999999987643  36788888765

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.3e-16  Score=146.61  Aligned_cols=209  Identities=15%  Similarity=0.068  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +..|+|+||||+|+||.++++.|+++|++|++++|+.+...+   .+.    ...+.++++|++|++++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            456889999999999999999999999999999997543221   111    1246789999999988877764      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                       .+|++||+||....           +...++|+.++..+++++.    +.+..++|++||.....  ....+|+.+|..
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  164 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHG  164 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHH
Confidence             68999999983221           1123578888877777764    34456899999976432  344679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      .+.+.+.       .|+++..++||.+-.+....+........   .......... .+...+|+|.+++.++.++.  .
T Consensus       165 ~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~va~~~~fl~s~~~~~i  243 (260)
T PRK07063        165 LLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK-RIGRPEEVAMTAVFLASDEAPFI  243 (260)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCcccccc
Confidence            9987642       57999999999886544322111000000   0000000111 35678999999999987643  4


Q ss_pred             CCcEEEEcCCCCC
Q 015872          278 NGRTLTFSGPRAW  290 (399)
Q Consensus       278 ~g~~~~l~~~~~~  290 (399)
                      .|+++.+.++..+
T Consensus       244 tG~~i~vdgg~~~  256 (260)
T PRK07063        244 NATCITIDGGRSV  256 (260)
T ss_pred             CCcEEEECCCeee
Confidence            6888888877543

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.7e-16  Score=148.32  Aligned_cols=185  Identities=16%  Similarity=0.146  Sum_probs=133.0

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-----
Q 015872           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ...+..++|+||||+|+||.++++.|+++|++|++++|+.+...+   .+..  ..+.++++|++|.+++.++++     
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345566899999999999999999999999999999998543221   1111  236789999999998877776     


Q ss_pred             --CCCEEEECCCCCCC-------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC---CCCCcHHH
Q 015872          148 --GVHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK---HPEVPLME  205 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~---~~~~~y~~  205 (399)
                        ++|+|||+||....             ....++|+.+..++++++    ++.+..++|++||.+...   .....|+.
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~a  194 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNA  194 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHH
Confidence              78999999983211             112357888877766654    456677999999976432   33467999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +|...+.+.+       ..|++++.++||.+-......    ...    +     .....+..+++|+.++.+++++
T Consensus       195 sKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~----~~~----~-----~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP----TKA----Y-----DGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc----ccc----c-----cCCCCCCHHHHHHHHHHHHhcC
Confidence            9999987653       358999999998775543221    000    0     0113467899999999999864

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.8e-16  Score=144.18  Aligned_cols=202  Identities=16%  Similarity=0.158  Sum_probs=140.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+.+....    .+.  ..++.++.+|++|.+++.++++       +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999988876432211    111  1247889999999988887775       6


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +|+|||++|....           +...++|+.++.++++++.+.  ...++|++||....  ..+...|+.+|...+.+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  163 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGL  163 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHHH
Confidence            8999999984321           112358889999988888654  22489999987653  33456899999999987


Q ss_pred             HHh-------CCCCEEEEecCcccccccccc-hhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQY-AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      ++.       .++.+++++||.+........ ......  .+. ...... .+.+++|+++++..++.++.  ..|++++
T Consensus       164 ~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~-~~~~~~-~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  239 (245)
T PRK12937        164 VHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID--QLA-GLAPLE-RLGTPEEIAAAVAFLAGPDGAWVNGQVLR  239 (245)
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHH--HHH-hcCCCC-CCCCHHHHHHHHHHHcCccccCccccEEE
Confidence            742       478999999988765432111 000100  000 000111 35678999999999987643  3578898


Q ss_pred             EcCC
Q 015872          284 FSGP  287 (399)
Q Consensus       284 l~~~  287 (399)
                      +.++
T Consensus       240 ~~~g  243 (245)
T PRK12937        240 VNGG  243 (245)
T ss_pred             eCCC
Confidence            8765

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=145.65  Aligned_cols=179  Identities=18%  Similarity=0.263  Sum_probs=131.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCC-Cc---ccccc---CCcEEEEccCCCCCcHHHHhc------C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPA-PA---DFLRD---WGATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~-~~---~~l~~---~~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      .++|+||||+|.||.+++++|+++| ++|++++|+.++ ..   +.++.   .+++++++|++|++++.++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            4689999999999999999999995 999999998654 11   11222   257899999999887655443      6


Q ss_pred             CCEEEECCCCCCC--C---------cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE--E---------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--~---------~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|++||++|....  .         ...++|+.++..    +++++++.+..+||++||....  ..+...|+.+|....
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~  167 (253)
T PRK07904         88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLD  167 (253)
T ss_pred             CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            9999999983211  1         124678777655    6777777777899999997642  234467999999987


Q ss_pred             HHH-------HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFL-------QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.       +..++++++++||.+..++....     .         ... ..+..+|+|+.++.+++++.
T Consensus       168 ~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-----~---------~~~-~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        168 GFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-----K---------EAP-LTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeeCceecchhccC-----C---------CCC-CCCCHHHHHHHHHHHHHcCC
Confidence            543       45789999999999986543211     0         001 24678999999999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-16  Score=145.46  Aligned_cols=206  Identities=16%  Similarity=0.181  Sum_probs=144.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+.+.....   ++.  .++.++.+|++|++++.++++       
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999975432111   111  247889999999988877664       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      .+|+|||++|.....           ....+|+.++..+++++.    +.+..+||++||....  ......|+.+|...
T Consensus        88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~  167 (256)
T PRK06124         88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGL  167 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHH
Confidence            469999999943221           124578888878775554    4567799999987643  23356799999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      +.+.+.       .++++..++|+.+.+........ ....  ..+....... .+++.+|++.+++.++.++.  ..|+
T Consensus       168 ~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~G~  244 (256)
T PRK06124        168 TGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVG--PWLAQRTPLG-RWGRPEEIAGAAVFLASPAASYVNGH  244 (256)
T ss_pred             HHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHH--HHHHhcCCCC-CCCCHHHHHHHHHHHcCcccCCcCCC
Confidence            877632       58999999999888654322110 0000  0000000111 47889999999999998753  3578


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      .+.+.++.
T Consensus       245 ~i~~dgg~  252 (256)
T PRK06124        245 VLAVDGGY  252 (256)
T ss_pred             EEEECCCc
Confidence            88887753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=145.19  Aligned_cols=206  Identities=12%  Similarity=0.091  Sum_probs=143.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++..+++|||||+|.||.+++++|+++|++|++++|+.++...   .+..  ..+..+.+|++|++++.++++       
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4557899999999999999999999999999999997543221   1221  246778899999988877664       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      .+|+|||++|....           ....++|+.++..+++++..    .+..+||++||...  ...+...|..+|...
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  165 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAV  165 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHH
Confidence            48999999984221           12346788888777776654    34568999998754  234557899999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      +.+.+.       .|+++..++||++.......... ....  .......... .+...+|+|.+++.++...  ...|.
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~--~~~~~~~p~~-~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        166 KMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFT--AWLCKRTPAA-RWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCCcCC
Confidence            987643       58999999999887654332110 0000  0000111111 4678899999999998753  33678


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      +..+.++.
T Consensus       243 ~i~~dgg~  250 (254)
T PRK08085        243 LLFVDGGM  250 (254)
T ss_pred             EEEECCCe
Confidence            88887764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=145.59  Aligned_cols=206  Identities=14%  Similarity=0.052  Sum_probs=142.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.++|+||||+|+||.++++.|+++|++|++++|+..+....   +..  ..+..+++|+.|.+++.++++       
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45568899999999999999999999999999999974332211   111  136788999999988776654       


Q ss_pred             CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      .+|+|||++|..+.            +...++|+.+...+++++    ++.+..++|++||....  ..+...|+.+|..
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  164 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAA  164 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHH
Confidence            58999999984221            123457888887776665    45556799999986542  3455689999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+++.       .|++++.+.||.+...+........... .......... .+...+|+|++++.++.+..  ..|+
T Consensus       165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~g~  242 (252)
T PRK07035        165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAIL-KQALAHIPLR-RHAEPSEMAGAVLYLASDASSYTTGE  242 (252)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHH-HHHHccCCCC-CcCCHHHHHHHHHHHhCccccCccCC
Confidence            9987643       5899999999988655433221100000 0000000111 35678999999999987643  3678


Q ss_pred             EEEEcCC
Q 015872          281 TLTFSGP  287 (399)
Q Consensus       281 ~~~l~~~  287 (399)
                      ++.+.++
T Consensus       243 ~~~~dgg  249 (252)
T PRK07035        243 CLNVDGG  249 (252)
T ss_pred             EEEeCCC
Confidence            8888775

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.72  E-value=1.1e-16  Score=144.92  Aligned_cols=198  Identities=16%  Similarity=0.161  Sum_probs=138.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccccC--CcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDW--GATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      |+|||++|+||.++++.|+++|++|++++|+..+..    ..+...  .+.++.+|++|++++.+++.       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999999753221    111222  36789999999998877764       47999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCC-C-CCCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC-D-KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~-~-~~~~~~y~~~K~~~E~~l~  215 (399)
                      ||++|....           +...++|+.++.++++++..    .+.++||++||.+. . ..+...|+.+|...+.+.+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            999994321           22345888999999888865    35569999999643 2 2345679999998887652


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcC
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSG  286 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~  286 (399)
                             ..|+.+++++|+.+.++...... ..... .... .... ..+.+++|++++++.++..+  ...|++|++.+
T Consensus       161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~-~~~~~-~~~~-~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       161 SLAKELASRNITVNAVAPGFIDTDMTDKLS-EKVKK-KILS-QIPL-GRFGTPEEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHhhcCeEEEEEEECCCCChhhhhcC-hHHHH-HHHh-cCCc-CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence                   26899999999987654322111 10000 0000 0011 13668899999999988653  34678999976


Q ss_pred             C
Q 015872          287 P  287 (399)
Q Consensus       287 ~  287 (399)
                      +
T Consensus       237 g  237 (239)
T TIGR01830       237 G  237 (239)
T ss_pred             C
Confidence            5

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=2.2e-16  Score=144.84  Aligned_cols=206  Identities=12%  Similarity=0.095  Sum_probs=141.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---ccccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+..++||||||+|.||..+++.|+++|++|+++.|+ .+..   +.+..  ..+.++++|++|.+++.++++       
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997 3211   11211  247889999999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      ++|++||++|....           +...++|+.+...+.+++.    +.+..++|++||....  ......|+.+|...
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  170 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGV  170 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHH
Confidence            68999999984221           1123578888766665553    4456799999997654  23345899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|++++.++||.+..+........-.........- ... .+...+|+|..+..++.+..  ..|.+
T Consensus       171 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~  248 (258)
T PRK06935        171 AGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRI-PAG-RWGEPDDLMGAAVFLASRASDYVNGHI  248 (258)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcC-CCC-CCCCHHHHHHHHHHHcChhhcCCCCCE
Confidence            98763       258999999999887553221110000000010000 111 47778999999999887532  36888


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +.+.++.
T Consensus       249 i~~dgg~  255 (258)
T PRK06935        249 LAVDGGW  255 (258)
T ss_pred             EEECCCe
Confidence            8888763

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.72  E-value=1.4e-16  Score=142.84  Aligned_cols=189  Identities=15%  Similarity=0.159  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC---CcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW---GATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~---~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .+++++++|||||+.||..+++.|+++||+|+++.|+.++..+   .+...   .++++.+|++|++++.....      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999999998664322   22222   36789999999998877663      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                       .+|++||+||.....           ...++|+.+...    ++.-+.+.+-.++|.++|.+...  +....|+.+|..
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence             589999999943322           233567666544    45555666777999999987643  345679999998


Q ss_pred             HHHHH-------HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          210 TEQFL-------QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       210 ~E~~l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +-.+-       +..|+.++.+.||.+...+...      .+......  ....-+++.+|+|+.++.+++..+
T Consensus       163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~------~~~~~~~~--~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA------KGSDVYLL--SPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCccccccccc------cccccccc--cchhhccCHHHHHHHHHHHHhcCC
Confidence            86543       4578999999999988665531      11111111  112358889999999999998754

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.72  E-value=8.3e-17  Score=146.68  Aligned_cols=204  Identities=16%  Similarity=0.130  Sum_probs=139.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHh-------cCCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~-------~~~d~  151 (399)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+.+........  ..+.++++|++|.+++..++       .++|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4467999999999999999999999999999999974332222111  24678899999987765544       36899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCC--CCCCCCcHHHHHHHHHHHHH-
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l~-  215 (399)
                      |||++|....           +...++|+.++.++++++...  ...++|++||...  ......+|+.+|...|.+++ 
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKT  163 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHH
Confidence            9999984221           123468999999999999752  2246777776443  23455789999999998873 


Q ss_pred             ---h---CCCCEEEEecCcccccccccch-h----hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          216 ---D---SGLPHVIIRLCGFMQGLIGQYA-V----PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       216 ---~---~g~~~~ilRp~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                         +   .|+++.++|||.++++...... .    ..... .+.. ..... -+.+.+|+|++++.++.++.  ..|..+
T Consensus       164 la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~~~va~~~~~l~~~~~~~~~g~~i  240 (249)
T PRK06500        164 LSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAA-QIQA-LVPLG-RFGTPEEIAKAVLYLASDESAFIVGSEI  240 (249)
T ss_pred             HHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHH-HHHh-cCCCC-CCcCHHHHHHHHHHHcCccccCccCCeE
Confidence               2   4899999999998865432110 0    00000 0000 00111 25678999999999887533  346677


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.++
T Consensus       241 ~~~gg  245 (249)
T PRK06500        241 IVDGG  245 (249)
T ss_pred             EECCC
Confidence            77765

>PRK08324 short chain dehydrogenase; Validated

Probab=99.72  E-value=1.5e-16  Score=164.92  Aligned_cols=209  Identities=18%  Similarity=0.126  Sum_probs=147.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc-CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +..++|+||||+|+||.++++.|+++|++|++++|+.+.....   +.. .++.++.+|++|++++.++++       ++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999985432211   111 267889999999988877664       68


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCC-cEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      |+|||++|....           ....++|+.++..+++++.    +.+. .+||++||....  .....+|+.+|...+
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~  579 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL  579 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence            999999993322           1234588889888866664    4444 689999997653  234568999999999


Q ss_pred             HHHHh-------CCCCEEEEecCccc-ccc-cccchh--hhc-ccc------ccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          212 QFLQD-------SGLPHVIIRLCGFM-QGL-IGQYAV--PIL-EEK------SVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~-~~~-~~~~~~--~~~-~~~------~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+.+.       .|+++++++|+.+| +.. ......  ... .+.      ..+..+... ..+++++|+|++++.++.
T Consensus       580 ~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-~~~v~~~DvA~a~~~l~s  658 (681)
T PRK08324        580 HLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLL-KREVTPEDVAEAVVFLAS  658 (681)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCc-CCccCHHHHHHHHHHHhC
Confidence            87743       46999999999996 321 111110  000 000      122222222 378999999999999984


Q ss_pred             --CCccCCcEEEEcCCCCC
Q 015872          274 --NEKINGRTLTFSGPRAW  290 (399)
Q Consensus       274 --~~~~~g~~~~l~~~~~~  290 (399)
                        .....|++|++.++...
T Consensus       659 ~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        659 GLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             ccccCCcCCEEEECCCchh
Confidence              34456889999988643

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.1e-17  Score=149.87  Aligned_cols=187  Identities=13%  Similarity=0.092  Sum_probs=131.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhc--------CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLV--------GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~--------~~d~  151 (399)
                      ||+++||||+|+||.++++.|+++|++|.+++|+.+...+.   +....+.++++|++|.+++.++++        .+|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            36899999999999999999999999999999975432221   112358899999999988877654        4699


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+||....           +..+++|+.++.++++++.    ..+..+||++||....  ......|+.+|...+.+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT  160 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence            9999984321           2234688999988888774    3445689999987542  234567999999998766


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +       ..++++++++|+.+...............  ..   .... ..+..+|+|++++.+++++
T Consensus       161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~---~~~~-~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        161 EALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG--ST---KRLG-VRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHhcccCcEEEEEecCCcCCcccccccchhhhh--hH---hhcc-CCCCHHHHHHHHHHHHhCC
Confidence            3       25799999999988755432200000000  00   0111 2356699999999999754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=1.5e-16  Score=144.91  Aligned_cols=201  Identities=17%  Similarity=0.151  Sum_probs=134.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +|+|+||||+|+||..+++.|+++|++|.+++++..+...    .+.  ..++.++++|++|.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999887654332211    111  1257889999999988766553       58


Q ss_pred             CEEEECCCCCCC------------CcchhccHHHHHHHHHHHH-HcCC------cEEEEecccCCC-CCC--CCcHHHHH
Q 015872          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCAK-AMGI------QKYVFYSIHNCD-KHP--EVPLMEIK  207 (399)
Q Consensus       150 d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~-~~~v------~~~V~~Ss~~~~-~~~--~~~y~~~K  207 (399)
                      |+|||++|....            .....+|+.++..+++++. ....      .+||++||.... ..+  ...|+.+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999984321            1124588888888765443 3222      269999986542 222  35799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccC-CCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT-DALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ...+.+.+       ..|+++++++||++........-.+...  ..... .+..  ....++|+++.++.++.++.  .
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~--~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRA--ARLGAQTPLG--RAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHH--HHHhhcCCCC--CCcCHHHHHHHHHHHcCccccCc
Confidence            99987653       2489999999999876543210000000  00000 0111  24677999999999988753  4


Q ss_pred             CCcEEEEcCC
Q 015872          278 NGRTLTFSGP  287 (399)
Q Consensus       278 ~g~~~~l~~~  287 (399)
                      .|+++.+.++
T Consensus       238 ~G~~~~~~gg  247 (248)
T PRK06947        238 TGALLDVGGG  247 (248)
T ss_pred             CCceEeeCCC
Confidence            6788887765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.5e-16  Score=143.51  Aligned_cols=179  Identities=16%  Similarity=0.147  Sum_probs=131.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++++||||+|+||.+++++|+++|++|++++|+..+....   +.    ...+.++++|++|++++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999975432211   11    2257889999999988766654       6


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC-CC--CCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-KH--PEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~-~~--~~~~y~~~K~~~  210 (399)
                      +|+|||++|.....           ...++|+.+..++++++    ++.+.++||++||.... ..  +...|+.+|...
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            89999999832221           22468888888877766    35567799999996543 22  246799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+       ..++++++++||++........     .         . ....++.+|.|++++.+++++.
T Consensus       162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----~---------~-~~~~~~~~~~a~~i~~~~~~~~  219 (248)
T PRK08251        162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----K---------S-TPFMVDTETGVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----c---------c-CCccCCHHHHHHHHHHHHhcCC
Confidence            87663       2578999999998875543210     0         0 1135778999999999998643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=143.97  Aligned_cols=206  Identities=12%  Similarity=0.090  Sum_probs=140.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .+..++++||||+|.||.++++.|+++|++|++++|+.++..+    .+..  .++..+++|++|++++.++++      
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3556899999999999999999999999999999997543211    1221  246789999999988877664      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC-C---CCCcHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK-H---PEVPLMEIK  207 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~-~---~~~~y~~~K  207 (399)
                       .+|+|||++|....           +..+++|+.++..+++++    ++.+..++|++||..... .   +...|..+|
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK  164 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASK  164 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHH
Confidence             47999999994321           222458888886665554    444556899999875431 1   246899999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ...+.+.+       ..|+++.+++||.+.........  .......+....... .+...+|++.+++.++.+.  ...
T Consensus       165 aa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~--~~~~~~~~~~~~p~~-r~~~~~dva~~~~~l~s~~~~~~t  241 (254)
T PRK06114        165 AGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE--MVHQTKLFEEQTPMQ-RMAKVDEMVGPAVFLLSDAASFCT  241 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc--chHHHHHHHhcCCCC-CCcCHHHHHHHHHHHcCccccCcC
Confidence            99887653       36899999999988765432100  000000000000111 3567899999999988753  236


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.++.
T Consensus       242 G~~i~~dgg~  251 (254)
T PRK06114        242 GVDLLVDGGF  251 (254)
T ss_pred             CceEEECcCE
Confidence            7888888763

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.8e-16  Score=144.59  Aligned_cols=151  Identities=13%  Similarity=0.094  Sum_probs=115.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~~  155 (399)
                      +|+|+||||+|+||.++++.|+++|++|++++|+..+. ..+...+++++.+|++|.+++.++++       ++|+|||+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-EALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            36899999999999999999999999999999974432 22334468889999999888876653       68999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHHHH---cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH----
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa~~---~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~----  215 (399)
                      +|....           ....++|+.++.++++++..   .+..++|++||....  .....+|+.+|...+.+.+    
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~  159 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRL  159 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            983221           12235888888888877643   234589999986542  3345789999999987652    


Q ss_pred             ---hCCCCEEEEecCccccccc
Q 015872          216 ---DSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       216 ---~~g~~~~ilRp~~~~~~~~  234 (399)
                         ..|+++++++||.+..++.
T Consensus       160 e~~~~gi~v~~v~pg~v~t~~~  181 (274)
T PRK05693        160 ELAPFGVQVMEVQPGAIASQFA  181 (274)
T ss_pred             HhhhhCeEEEEEecCccccccc
Confidence               3689999999999876543

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.8e-16  Score=143.63  Aligned_cols=205  Identities=16%  Similarity=0.122  Sum_probs=138.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cc---cccc--CCcEEEEccCCCCCcHHHHhc--------
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLRD--WGATVVNADLSKPETIPATLV--------  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~--------  147 (399)
                      +.|+++||||+|+||.++++.|++.|++|.+..+..... ..   .+..  ..+..+.+|++|.+++..+++        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            357899999999999999999999999999876432221 11   1111  235678899999876654331        


Q ss_pred             -----CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 -----GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                           ++|+|||+||..+.           +..+++|+.++..+++++...  +..+||++||.....  .....|+.+|
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence                 58999999983221           222358999999888877653  224899999987643  3446899999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ..++.+.+       ..|+++..+.||.+............... .........+ .+.+++|+|+++..++....  ..
T Consensus       163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~  240 (252)
T PRK12747        163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK-QYATTISAFN-RLGEVEDIADTAAFLASPDSRWVT  240 (252)
T ss_pred             HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH-HHHHhcCccc-CCCCHHHHHHHHHHHcCccccCcC
Confidence            99997763       35899999999998765432211100000 0000000112 46788999999999886532  36


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.++.
T Consensus       241 G~~i~vdgg~  250 (252)
T PRK12747        241 GQLIDVSGGS  250 (252)
T ss_pred             CcEEEecCCc
Confidence            7888888763

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.71  E-value=2.5e-16  Score=142.43  Aligned_cols=199  Identities=18%  Similarity=0.185  Sum_probs=138.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~~  155 (399)
                      +|+++||||+|.||.++++.|+++|++|++++|+.++....+...++.++.+|++|.+++.++++       ++|++||+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            57899999999999999999999999999999986554444444568899999999988876653       48999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHHH----HcC--CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~  216 (399)
                      +|....           +...++|+.++..+.+++.    +.+  ..++|++||....  ......|+.+|...+.+.+.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483         82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHH
Confidence            983211           1123577777766555443    333  3589999987543  23356799999999987742


Q ss_pred             ------CCCCEEEEecCcccccccc-cchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC
Q 015872          217 ------SGLPHVIIRLCGFMQGLIG-QYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR  288 (399)
Q Consensus       217 ------~g~~~~ilRp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~  288 (399)
                            .++++..++||.+..+... ......     ..... ... -+...+|+|+++..++......|+++.+.|+.
T Consensus       162 ~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~-----~~~~~-~~~-~~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        162 FAAKLAPEVKVNSIAPALILFNEGDDAAYRQK-----ALAKS-LLK-IEPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHCCCcEEEEEccCceecCCCCCHHHHHH-----HhccC-ccc-cCCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence                  3589999999987532111 000000     00000 111 24467999999999997655678888888764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.71  E-value=1e-16  Score=145.91  Aligned_cols=200  Identities=16%  Similarity=0.150  Sum_probs=133.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEe-cCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~-r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ++|+||||+|+||.+++++|+++|++|+++. |+..+..+.   +..  .++..+++|++|++++.++++       ++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            5799999999999999999999999998754 543221111   111  246789999999998877765       468


Q ss_pred             EEEECCCCC-CC-----------CcchhccHHHHHHHHHHHHHcC-------CcEEEEecccCCC-CCC--CCcHHHHHH
Q 015872          151 TVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKAMG-------IQKYVFYSIHNCD-KHP--EVPLMEIKY  208 (399)
Q Consensus       151 ~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~~~~-------v~~~V~~Ss~~~~-~~~--~~~y~~~K~  208 (399)
                      +|||++|.. ..           ....++|+.++..+++++...-       ..+||++||.... ..+  ...|+.+|.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            999999842 11           1234678888877766654321       2469999997543 223  247999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ..+.+++       +.+++++++||+.++++.......+ ....  .. ..-... ...+.+|+|++++.++.++.  ..
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~--~~-~~~~~~-~~~~~~dva~~~~~~~~~~~~~~~  237 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDR--VK-SNIPMQ-RGGQPEEVAQAIVWLLSDKASYVT  237 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHH--HH-hcCCCC-CCcCHHHHHHHHHhhcChhhcCcc
Confidence            9987763       3589999999999997643211000 0000  00 000011 13478999999999887542  45


Q ss_pred             CcEEEEcCC
Q 015872          279 GRTLTFSGP  287 (399)
Q Consensus       279 g~~~~l~~~  287 (399)
                      |++|++.++
T Consensus       238 g~~~~~~g~  246 (247)
T PRK09730        238 GSFIDLAGG  246 (247)
T ss_pred             CcEEecCCC
Confidence            778888775

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.9e-16  Score=143.64  Aligned_cols=184  Identities=17%  Similarity=0.166  Sum_probs=132.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +|+++||||+|.+|..++++|+++|++|++++|+.++....   +.  ..++.++.+|++|.+++.++++       ++|
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD   85 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999975432211   11  1257889999999988877664       489


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +|||++|....           +....+|+.++.++++.+    ++.+..++|++||....  ..+..+|+.+|...+.+
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  165 (241)
T PRK07454         86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAF  165 (241)
T ss_pred             EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHH
Confidence            99999984221           122357888777766555    44556789999998653  23456899999999977


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+       ..|++++++|||.+........        .....  .....++..+|+|++++.++.++.
T Consensus       166 ~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~--------~~~~~--~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        166 TKCLAEEERSHGIRVCTITLGAVNTPLWDTE--------TVQAD--FDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHhhhhCCEEEEEecCcccCCccccc--------ccccc--cccccCCCHHHHHHHHHHHHcCCc
Confidence            53       3589999999998865432110        00000  001146788999999999998764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.71  E-value=3.8e-16  Score=149.53  Aligned_cols=223  Identities=18%  Similarity=0.201  Sum_probs=158.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCc--c------------cccc------CCcEEEEccCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPA--D------------FLRD------WGATVVNADLSK  138 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~--~------------~l~~------~~v~~~~~Dl~d  138 (399)
                      ..|+|+|||||||+|..+++.|+..-   -+|.++.|......  +            .+.+      .++..+.||+++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            35789999999999999999999762   47888888643221  0            0111      257889999987


Q ss_pred             C------CcHHHHhcCCCEEEECCCCCC----CCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCC-----------
Q 015872          139 P------ETIPATLVGVHTVIDCATGRP----EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCD-----------  196 (399)
Q Consensus       139 ~------~~l~~~~~~~d~Vi~~a~~~~----~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~-----------  196 (399)
                      +      .++....+.+|+|||+|+...    ......+|..|++++++.|++.. .+-+|++||+.+.           
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y  170 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY  170 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence            5      344545678999999999433    33334689999999999999985 6789999987431           


Q ss_pred             -------------------------------CCCCCcHHHHHHHHHHHHHh--CCCCEEEEecCcccccc---cccchhh
Q 015872          197 -------------------------------KHPEVPLMEIKYCTEQFLQD--SGLPHVIIRLCGFMQGL---IGQYAVP  240 (399)
Q Consensus       197 -------------------------------~~~~~~y~~~K~~~E~~l~~--~g~~~~ilRp~~~~~~~---~~~~~~~  240 (399)
                                                     ...++-|.-+|+.+|+.+.+  .+++.+|+||+.+...+   +..|...
T Consensus       171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn  250 (467)
T KOG1221|consen  171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN  250 (467)
T ss_pred             CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence                                           11234588899999999965  67999999999876322   2222222


Q ss_pred             hc----------ccc-ccccCCCCcceeceeHHHHHHHHHHHHhC-Cc----cCCcEEEEcCCC--CCCHHHHHHHHHHH
Q 015872          241 IL----------EEK-SVWGTDALTRIAYMDTQDIARLTFVALRN-EK----INGRTLTFSGPR--AWTTQEVITLCERL  302 (399)
Q Consensus       241 ~~----------~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~-~~----~~g~~~~l~~~~--~~s~~e~~~~~~~~  302 (399)
                      ..          +|. ..+..+.+...++|.+|.++.+++.+.-. ..    ....+||+++++  ++++.++.+...+.
T Consensus       251 ~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~  330 (467)
T KOG1221|consen  251 LNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRY  330 (467)
T ss_pred             CCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHh
Confidence            21          111 22223456667999999999999976632 11    124599999755  59999999999887


Q ss_pred             hC
Q 015872          303 AG  304 (399)
Q Consensus       303 ~g  304 (399)
                      .-
T Consensus       331 ~~  332 (467)
T KOG1221|consen  331 FE  332 (467)
T ss_pred             cc
Confidence            64

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.2e-16  Score=148.97  Aligned_cols=197  Identities=16%  Similarity=0.144  Sum_probs=136.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.+++|+||||+|.||.++++.|+++|++|++++|+.+....   .+..  ..+.++++|++|.+++.++++       
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            3456789999999999999999999999999999997543221   1111  246789999999998877653       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      .+|++||++|.....           ...++|+.+..+    ++..+++.+..+||++||.....  .....|+.+|...
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~  164 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAI  164 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHH
Confidence            689999999843211           123466555544    55555666667999999987643  2346799999998


Q ss_pred             HHHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          211 EQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       211 E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +.+.+         ..++++++++|+.+..+..... ......      .......+...+|+|++++.++.++.   +.
T Consensus       165 ~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~-~~~~~~------~~~~~~~~~~pe~vA~~i~~~~~~~~---~~  234 (334)
T PRK07109        165 RGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA-RSRLPV------EPQPVPPIYQPEVVADAILYAAEHPR---RE  234 (334)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh-hhhccc------cccCCCCCCCHHHHHHHHHHHHhCCC---cE
Confidence            87642         1469999999998875543211 111110      00111246688999999999998762   45


Q ss_pred             EEEcC
Q 015872          282 LTFSG  286 (399)
Q Consensus       282 ~~l~~  286 (399)
                      +.+++
T Consensus       235 ~~vg~  239 (334)
T PRK07109        235 LWVGG  239 (334)
T ss_pred             EEeCc
Confidence            66655

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.71  E-value=1.9e-16  Score=144.98  Aligned_cols=206  Identities=15%  Similarity=0.145  Sum_probs=144.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++++|+||||+|+||.++++.|+++|++|++++|+.+....   .+..  .++.++.+|++|.+++.++++       +
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999987443211   1111  246788999999988876653       5


Q ss_pred             CCEEEECCCCCCC-------Cc---chhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-------EP---IKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-------~~---~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      +|+|||++|....       +.   ..++|+.++.++++++.    +.+..++|++||....  ..+...|+.+|...+.
T Consensus        89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (255)
T PRK06113         89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH  168 (255)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence            7999999983221       11   14589999999888885    3344589999997653  2345679999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +++.       .|++++++.||.+..........+-.... .. ...... .+...+|++++++.++....  ..|++++
T Consensus       169 ~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~d~a~~~~~l~~~~~~~~~G~~i~  245 (255)
T PRK06113        169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-ML-QHTPIR-RLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_pred             HHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHH-HH-hcCCCC-CCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            7742       57999999999887544322111100000 00 000111 36688999999999997532  3688999


Q ss_pred             EcCCCC
Q 015872          284 FSGPRA  289 (399)
Q Consensus       284 l~~~~~  289 (399)
                      +.++..
T Consensus       246 ~~gg~~  251 (255)
T PRK06113        246 VSGGGV  251 (255)
T ss_pred             ECCCcc
Confidence            998754

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=144.22  Aligned_cols=207  Identities=14%  Similarity=0.069  Sum_probs=141.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+.++...   .+..  .++..+++|++|.+++..+++       .
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999997543221   1111  247889999999988877664       4


Q ss_pred             CCEEEECCCCCCC------------CcchhccHHHHHHHHHH----HHHcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE------------EPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      +|+|||++|....            ....++|+.++..++++    +.+.+..++|++||....  ......|+.+|...
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  164 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAV  164 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            6999999984211            11235788887665554    344555689999987643  33456799999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+.+.       .|+++..+.||.+-.................+....... .+...+|+++.++.++.+.  ...|+.
T Consensus       165 ~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~ia~~~~~l~~~~~~~~~G~~  243 (253)
T PRK06172        165 IGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVG-RIGKVEEVASAVLYLCSDGASFTTGHA  243 (253)
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCC-CccCHHHHHHHHHHHhCccccCcCCcE
Confidence            877632       579999999998865543322110000000000000111 3567899999999999764  346889


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +.+.++.
T Consensus       244 i~~dgg~  250 (253)
T PRK06172        244 LMVDGGA  250 (253)
T ss_pred             EEECCCc
Confidence            9998874

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.5e-16  Score=143.07  Aligned_cols=179  Identities=17%  Similarity=0.141  Sum_probs=131.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHhc----CCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV----GVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~----~~d~V  152 (399)
                      +|+|+||||+|+||.++++.|+++|++|++++|+.++......      ..+++++++|++|++++.++++    .+|.|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            3689999999999999999999999999999998543322111      1257899999999998877765    46999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ||++|....           ....++|+.++..+++++..    .+..++|++||....  ......|+.+|...+.+.+
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence            999983211           12346889998888877654    456799999987542  3345679999999887653


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                             +.|++++.++|+.+.+......        .. +     .......+|+|+.++.+++++
T Consensus       161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~--------~~-~-----~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGL--------KL-P-----GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHhhccCcEEEEEecCcccChhhhcc--------CC-C-----ccccCCHHHHHHHHHHHHhCC
Confidence                   4689999999998876532110        00 0     113567899999999988865

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.71  E-value=3.6e-16  Score=142.28  Aligned_cols=202  Identities=12%  Similarity=0.169  Sum_probs=136.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-Ccccc---cc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFL---RD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~l---~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.|.++||||+|+||.+++++|+++|++|++..+.... ....+   ..  ..+..+.+|+.|.+++.++++       +
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999886543222 11111   11  236677899999988876654       5


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHH----HHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~----~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||++|....           +...++|+.++..+.    +.+++.+..++|++||....  ......|+.+|...+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~  161 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH  161 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHH
Confidence            8999999984321           222457888865544    44455667799999987542  234567999999888


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~  282 (399)
                      .+.+       ..|++++.++||.+.+.............  +.. . .....+...+|++++++.++.++  ...|+.+
T Consensus       162 ~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~--~~~-~-~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        162 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK--IVA-T-IPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHH--HHh-c-CCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            7653       36899999999988765543211111100  000 0 11113567899999999988663  2467888


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.++
T Consensus       238 ~~~~g  242 (246)
T PRK12938        238 SLNGG  242 (246)
T ss_pred             EECCc
Confidence            88775

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-16  Score=144.21  Aligned_cols=204  Identities=13%  Similarity=0.145  Sum_probs=141.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+++||||+|.||.++++.|+++|++|++++|+.++....   +..  .++..+++|++|++++.++++       
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34568999999999999999999999999999999975432211   111  246788999999988877654       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCC--CC--CCCcHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCD--KH--PEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~--~~--~~~~y~~~K  207 (399)
                      .+|++||++|....           ....++|+.++..+++++...    + -.++|++||....  ..  ....|+.+|
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asK  165 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASK  165 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHH
Confidence            68999999984221           112358888888888776432    2 2379999887543  21  236799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+       ..|+++..++||.+..+....... ..   ..+....... .+...+|+|++++.++....  ..
T Consensus       166 aal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~-~~---~~~~~~~~~~-r~~~p~~va~~~~~L~s~~~~~~t  240 (253)
T PRK05867        166 AAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE-YQ---PLWEPKIPLG-RLGRPEELAGLYLYLASEASSYMT  240 (253)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH-HH---HHHHhcCCCC-CCcCHHHHHHHHHHHcCcccCCcC
Confidence            99998764       258999999999887654322111 00   0010000111 36778999999999997532  36


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.++.
T Consensus       241 G~~i~vdgG~  250 (253)
T PRK05867        241 GSDIVIDGGY  250 (253)
T ss_pred             CCeEEECCCc
Confidence            8888888874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.7e-16  Score=142.64  Aligned_cols=204  Identities=14%  Similarity=0.103  Sum_probs=140.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +..++++||||+|+||..+++.|+++|++|++++|+.++....   +.  ...+.++++|++|.+++.++++       +
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4467899999999999999999999999999999975432211   11  1246789999999887766554       4


Q ss_pred             CCEEEECCCCCCC--------------------CcchhccHHHHHHHHHHHH----Hc-CCcEEEEecccCCCC-CCCCc
Q 015872          149 VHTVIDCATGRPE--------------------EPIKKVDWEGKVALIQCAK----AM-GIQKYVFYSIHNCDK-HPEVP  202 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------------------~~~~~~n~~~~~~l~~aa~----~~-~v~~~V~~Ss~~~~~-~~~~~  202 (399)
                      +|+|||++|....                    ....++|+.++..+..++.    +. .-.++|++||.+... .+...
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~  162 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN  162 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCCch
Confidence            7999999983211                    0123477877766554433    22 224789999876543 34678


Q ss_pred             HHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       203 y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |+.+|...+.+++       ..+++++.++|+.+.++...........   .+......+ .+.+++|+|+++..++...
T Consensus       163 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~a~~~~~l~~~~  238 (253)
T PRK08217        163 YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALE---RLEKMIPVG-RLGEPEEIAHTVRFIIEND  238 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHH---HHHhcCCcC-CCcCHHHHHHHHHHHHcCC
Confidence            9999999987753       3689999999999876543221111110   011111112 4678899999999999776


Q ss_pred             ccCCcEEEEcCCC
Q 015872          276 KINGRTLTFSGPR  288 (399)
Q Consensus       276 ~~~g~~~~l~~~~  288 (399)
                      ...|++|++.++.
T Consensus       239 ~~~g~~~~~~gg~  251 (253)
T PRK08217        239 YVTGRVLEIDGGL  251 (253)
T ss_pred             CcCCcEEEeCCCc
Confidence            5578999998864

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-16  Score=144.21  Aligned_cols=208  Identities=15%  Similarity=0.140  Sum_probs=142.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++++.++|+||||+|+||.+++++|+++|++|++++|+.+.....   +..  .++.++.+|++|++++.++++      
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            345668999999999999999999999999999999975432211   111  245788999999988877664      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                       ++|+|||++|....           ...+++|+.++.++++++...   .-.+||++||....  ......|..+|...
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~  164 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGV  164 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHH
Confidence             47999999973211           112358999999988887642   12589999997543  23456799999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccc-cccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQ-GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      +.+.+.       .|++++.++|+.+.+ .......... .....+....... .+...+|+|++++.++..+.  ..|.
T Consensus       165 ~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~  242 (264)
T PRK07576        165 DMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSP-ELQAAVAQSVPLK-RNGTKQDIANAALFLASDMASYITGV  242 (264)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCH-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHcChhhcCccCC
Confidence            988743       578999999998763 2111111000 0000000000111 35678999999999997633  3677


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      .+.+.++.
T Consensus       243 ~~~~~gg~  250 (264)
T PRK07576        243 VLPVDGGW  250 (264)
T ss_pred             EEEECCCc
Confidence            88888764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.8e-16  Score=141.69  Aligned_cols=178  Identities=16%  Similarity=0.106  Sum_probs=132.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhcC----CCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVG----VHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~----~d~Vi~~a~  157 (399)
                      ++|+||||+|+||.+++++|+++|++|++++|+.+.. +.+..  .++.++++|++|.+++.++++.    +|.+||++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL-DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            6799999999999999999999999999999974332 22221  2588899999999999888764    589999997


Q ss_pred             CCC--------C---CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH-------H
Q 015872          158 GRP--------E---EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL-------Q  215 (399)
Q Consensus       158 ~~~--------~---~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l-------~  215 (399)
                      ...        .   +...++|+.++.++++++...  +.+++|++||....  ......|+.+|..++.+.       .
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~  160 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR  160 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            321        1   123568999999999998763  23578988886432  234567999999999875       3


Q ss_pred             hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          216 DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ..|+++++++||.+++......        ..     ... ..+..+|+|+.++.+++.+.
T Consensus       161 ~~gi~v~~v~pg~i~t~~~~~~--------~~-----~~~-~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        161 PKGIEVVTVFPGFVATPLTDKN--------TF-----AMP-MIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             hcCceEEEEeCCcCCCCCcCCC--------CC-----CCC-cccCHHHHHHHHHHHHhcCC
Confidence            4689999999999986543211        00     011 24678999999999998753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.4e-16  Score=141.41  Aligned_cols=200  Identities=14%  Similarity=0.093  Sum_probs=138.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC-CcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ++.|+++||||+|+||.++++.|+++|++|++++|+.....    ..++.++.+|++++ +.+.+.+..+|+|||++|..
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence            45678999999999999999999999999999999743321    23578899999987 44444455799999999832


Q ss_pred             C----C--------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH------
Q 015872          160 P----E--------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ------  215 (399)
Q Consensus       160 ~----~--------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~------  215 (399)
                      .    .        ....++|+.++.++++++..    .+..+||++||....  ......|+.+|..++.+.+      
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~  158 (235)
T PRK06550         79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDY  158 (235)
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHh
Confidence            1    0        11245888998888887753    344589999987543  2345689999999887653      


Q ss_pred             -hCCCCEEEEecCcccccccccch-hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          216 -DSGLPHVIIRLCGFMQGLIGQYA-VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       216 -~~g~~~~ilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                       ..|+++++++||.+........+ ...... .+. ..... ..+...+|+|++++.++.+.  ...|.++.+.++
T Consensus       159 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        159 AKDGIQVFGIAPGAVKTPMTAADFEPGGLAD-WVA-RETPI-KRWAEPEEVAELTLFLASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             hhcCeEEEEEeeCCccCcccccccCchHHHH-HHh-ccCCc-CCCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence             25899999999988755322111 000000 000 00011 13677899999999999653  346788888776

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.9e-16  Score=143.98  Aligned_cols=192  Identities=16%  Similarity=0.080  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-----------CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----------GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----------~~d~  151 (399)
                      +|+|+||||+|+||.+++++|+++|++|++++|+..+........++.++++|+.|.+++.+++.           .+|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            35899999999999999999999999999999975432211112257889999999988877432           4789


Q ss_pred             EEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +||++|....            ....++|+.++..+.+.+    .+.+.++||++||....  ..+...|+.+|..+|.+
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHH  160 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999984221            223468888866655544    44455699999997653  23456799999999988


Q ss_pred             HH------hCCCCEEEEecCcccccccccchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          214 LQ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       214 l~------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ++      ..++++..++||.+-.+.............    ......+.  -.++..+|+|..++..+..+.
T Consensus       161 ~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        161 ARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKAS--GALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhc--CCCCCHHHHHHHHHHHHhccc
Confidence            75      257999999998875543221100000000    00000000  135667888887777766543

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.3e-16  Score=143.35  Aligned_cols=210  Identities=14%  Similarity=0.112  Sum_probs=142.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc---cCCcEEEEccCCCCCcHHHHhc------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR---DWGATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~---~~~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      ++.|+++||||+|.||.++++.|+++|++|++++|+.++...   .+.   ..++.++++|++|++++.++++      +
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            456889999999999999999999999999999997543221   111   1257889999999988877765      5


Q ss_pred             CCEEEECCCCCCC--------C---cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE--------E---PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------~---~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      +|++||++|....        +   ..+++|+.+...    ++..+++.+..++|++||.....  .....|+.+|...+
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~  165 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA  165 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence            8999999983211        1   123466665544    45555566667999999986532  22346999999998


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhh-hcc-c----c--ccccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILE-E----K--SVWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~-~----~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      .+.+       ..|+++..+.||.+........... ... +    .  ..+....... .+...+|+|++++.++.++ 
T Consensus       166 ~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dva~~v~fL~s~~~  244 (263)
T PRK08339        166 GLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLG-RLGEPEEIGYLVAFLASDLG  244 (263)
T ss_pred             HHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcc-cCcCHHHHHHHHHHHhcchh
Confidence            7653       3689999999998876543221100 000 0    0  0000000111 3667899999999998753 


Q ss_pred             -ccCCcEEEEcCCCCCC
Q 015872          276 -KINGRTLTFSGPRAWT  291 (399)
Q Consensus       276 -~~~g~~~~l~~~~~~s  291 (399)
                       ...|+++.+.++..+|
T Consensus       245 ~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        245 SYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cCccCceEEECCCcccc
Confidence             2468889888876554

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.70  E-value=1.8e-16  Score=144.77  Aligned_cols=206  Identities=11%  Similarity=0.069  Sum_probs=141.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .+..|+++||||+|.||.+++++|+++|++|++++|+..+. ...+..  .++.++++|++|++++.++++       .+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            35568999999999999999999999999999998863221 111222  247789999999998877764       58


Q ss_pred             CEEEECCCCCC-----------CCcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      |++||+||...           .+...++|+.++..+.+++..    .+ -.++|++||.....  .....|+.+|...+
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~  164 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVM  164 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHH
Confidence            99999998322           122346898888777776643    23 25899999975432  33468999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+..+....+...-.....+...-+..  .+...+|+|++++.++...  ...|+++
T Consensus       165 ~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~peeva~~~~~L~s~~~~~~~G~~i  242 (251)
T PRK12481        165 GLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPAS--RWGTPDDLAGPAIFLSSSASDYVTGYTL  242 (251)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCccccCcCCceE
Confidence            8763       368999999999886543322110000000011000111  3677899999999999753  3467888


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.++
T Consensus       243 ~vdgg  247 (251)
T PRK12481        243 AVDGG  247 (251)
T ss_pred             EECCC
Confidence            88775

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.5e-16  Score=141.60  Aligned_cols=198  Identities=14%  Similarity=0.128  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc-CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ++.++|+||||+|+||.++++.|+++|++|++++|+.++....   +.. .+++++++|++|++++.++++       ++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3457999999999999999999999999999999975432211   111 257889999999988876654       46


Q ss_pred             CEEEECCCCCCCC---------cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC---CCCCCcHHHHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE---------PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       150 d~Vi~~a~~~~~~---------~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~E~~l~  215 (399)
                      |.+||+++.....         ...+.|+.+...+++.+...  .-.++|++||....   ..+...|+.+|...+.+++
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~  162 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVE  162 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHH
Confidence            9999999843211         12356777766666665443  12478999987542   2334669999998886542


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                             ..+++++++||+++++........   ..  . .   .....++..+|++++++.++..+.  ..|+.+.+.+
T Consensus       163 ~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~---~~--~-~---~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~  233 (238)
T PRK05786        163 ILASELLGRGIRVNGIAPTTISGDFEPERNW---KK--L-R---KLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDG  233 (238)
T ss_pred             HHHHHHhhcCeEEEEEecCccCCCCCchhhh---hh--h-c---cccCCCCCHHHHHHHHHHHhcccccCccCCEEEECC
Confidence                   358999999999998754221100   00  0 0   111135677999999999997633  3577777765


Q ss_pred             C
Q 015872          287 P  287 (399)
Q Consensus       287 ~  287 (399)
                      +
T Consensus       234 ~  234 (238)
T PRK05786        234 G  234 (238)
T ss_pred             c
Confidence            4

>PRK07985 oxidoreductase; Provisional

Probab=99.70  E-value=9e-16  Score=143.50  Aligned_cols=205  Identities=14%  Similarity=0.096  Sum_probs=142.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-Ccccc----cc--CCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFL----RD--WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~l----~~--~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.++++||||+|+||.++++.|+++|++|++..|+... ..+.+    ..  ..+.++.+|++|.+++.++++     
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3556899999999999999999999999999988775322 11111    11  246788999999887766553     


Q ss_pred             --CCCEEEECCCCCC------------CCcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 --GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 --~~d~Vi~~a~~~~------------~~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                        ++|++||+||...            ....+++|+.++..+++++...  .-.+||++||.....  .....|+.+|..
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaa  205 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA  205 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHH
Confidence              5899999998321            1223468999999999888653  124899999986643  234679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ++.+.+       ..|+++..++||++.+.+.....  ....   ..+......+ .+...+|+|++++.++..+.  ..
T Consensus       206 l~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~-r~~~pedva~~~~fL~s~~~~~it  281 (294)
T PRK07985        206 ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI---PQFGQQTPMK-RAGQPAELAPVYVYLASQESSYVT  281 (294)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHH---HHHhccCCCC-CCCCHHHHHHHHHhhhChhcCCcc
Confidence            987753       35899999999999876432110  0000   0011110111 35678999999999987643  36


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |.++.+.++.
T Consensus       282 G~~i~vdgG~  291 (294)
T PRK07985        282 AEVHGVCGGE  291 (294)
T ss_pred             ccEEeeCCCe
Confidence            8889888874

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=9.6e-16  Score=140.41  Aligned_cols=201  Identities=17%  Similarity=0.160  Sum_probs=140.1

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCC-----------Cc---ccccc--CCcEEEEccCCCCCc
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPA-----------PA---DFLRD--WGATVVNADLSKPET  141 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~-----------~~---~~l~~--~~v~~~~~Dl~d~~~  141 (399)
                      +++.++|+||||+|  .||.++++.|+++|++|++++|+..+           ..   ..+..  ..++++.+|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            34567899999996  79999999999999999999987221           10   11111  247889999999888


Q ss_pred             HHHHhc-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCC--
Q 015872          142 IPATLV-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK--  197 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~--  197 (399)
                      +.++++       .+|+|||++|....           +...++|+.++..+++++...    +.+++|++||.....  
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            766653       57999999983211           112458999999999887643    345899999976533  


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHH
Q 015872          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      .....|+.+|...+.+++.       .+++++.++||.+...............  .+.   ..  .+...+|+|+++..
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~--~~~---~~--~~~~~~~~a~~~~~  234 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVP--KFP---QG--RVGEPVDAARLIAF  234 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhc--cCC---CC--CCcCHHHHHHHHHH
Confidence            3456799999999987642       5899999999988755432211111110  011   11  24456999999998


Q ss_pred             HHhCC--ccCCcEEEEcCC
Q 015872          271 ALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       271 ~l~~~--~~~g~~~~l~~~  287 (399)
                      ++...  ...|+++++.++
T Consensus       235 l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        235 LVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             HhCcccccccCCEEEecCC
Confidence            88763  245889999775

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.69  E-value=9.1e-16  Score=142.34  Aligned_cols=206  Identities=15%  Similarity=0.107  Sum_probs=139.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +..++++||||+|+||.++++.|+++|++|++++|+.+....   .+..  .++.++++|+.|++++.++++       .
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456889999999999999999999999999999997433211   1111  246789999999988776654       6


Q ss_pred             CCEEEECCCCCCC--------------------------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCCCC-
Q 015872          149 VHTVIDCATGRPE--------------------------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCDK-  197 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------------------------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~~-  197 (399)
                      +|+|||++|....                          ....++|+.++..+++    .+++.+..+||++||..... 
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  167 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP  167 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence            8999999983211                          1123467777765444    44445556899999986543 


Q ss_pred             -CCCCcHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhcc---cc-ccccCCCCcceeceeHHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILE---EK-SVWGTDALTRIAYMDTQDIA  265 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~v~v~Dva  265 (399)
                       .+...|+.+|...+.+.+.       .|+++..++||.+.......+...-..   .. .......... .+...+|+|
T Consensus       168 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~dva  246 (278)
T PRK08277        168 LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMG-RFGKPEELL  246 (278)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCcc-CCCCHHHHH
Confidence             3456799999999987642       589999999999876543221110000   00 0000000111 356789999


Q ss_pred             HHHHHHHhC-Cc--cCCcEEEEcCC
Q 015872          266 RLTFVALRN-EK--INGRTLTFSGP  287 (399)
Q Consensus       266 ~~i~~~l~~-~~--~~g~~~~l~~~  287 (399)
                      ++++.++.. ..  ..|..+.+.++
T Consensus       247 ~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        247 GTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             HHHHHHcCccccCCcCCCEEEECCC
Confidence            999998876 32  36888888876

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=8e-16  Score=141.72  Aligned_cols=208  Identities=11%  Similarity=0.062  Sum_probs=142.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++..++++||||+|.||.+++++|+++|++|+++.|+.++....   +..  .++.++++|++|.+++.+++.       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            45568899999999999999999999999999999875432211   212  247789999999998877764       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      .+|+|||++|.....           ...++|+.+...++.++    ++.+..+||++||....  ..+...|+.+|...
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  166 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence            489999999942211           11247887777665555    34556799999986432  33457899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcccc--cc---ccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SV---WGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      +.+.+       ..|++++.++||.+..............+.  ..   ........ .+...+|+|+.++.++.+.  .
T Consensus       167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~  245 (265)
T PRK07097        167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAA-RWGDPEDLAGPAVFLASDASNF  245 (265)
T ss_pred             HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCcc-CCcCHHHHHHHHHHHhCcccCC
Confidence            88763       258999999999987654322111000000  00   00000111 3667899999999999863  3


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+.+.+.++.
T Consensus       246 ~~g~~~~~~gg~  257 (265)
T PRK07097        246 VNGHILYVDGGI  257 (265)
T ss_pred             CCCCEEEECCCc
Confidence            467888888764

>PRK09242 tropinone reductase; Provisional

Probab=99.69  E-value=1.2e-15  Score=139.88  Aligned_cols=204  Identities=19%  Similarity=0.147  Sum_probs=141.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +..|+++||||+|.||.++++.|+++|++|++++|+.+...+.   +.    ..++.++++|++|++++.++++      
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999975432211   11    1247788999999887766553      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       ++|+|||++|....           .....+|+.++..+++++.    +.+..++|++||....  ..+...|+.+|..
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  166 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAA  166 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHH
Confidence             58999999984221           1123578888888887774    3455799999997653  3345789999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .+.+++       ..|++++.++||.+.......+... .... . +....... -+...+|++.++..++....  ..|
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~g  243 (257)
T PRK09242        167 LLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYE-Q-VIERTPMR-RVGEPEEVAAAVAFLCMPAASYITG  243 (257)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHH-H-HHhcCCCC-CCcCHHHHHHHHHHHhCcccccccC
Confidence            998764       3589999999998876543221100 0000 0 00000111 24567999999999986532  357


Q ss_pred             cEEEEcCC
Q 015872          280 RTLTFSGP  287 (399)
Q Consensus       280 ~~~~l~~~  287 (399)
                      +++.+.++
T Consensus       244 ~~i~~~gg  251 (257)
T PRK09242        244 QCIAVDGG  251 (257)
T ss_pred             CEEEECCC
Confidence            88888775

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1e-15  Score=140.35  Aligned_cols=205  Identities=13%  Similarity=0.070  Sum_probs=141.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+..++|+||||+|+||.++++.|+++|++|++++|+.++....   +.  ..++.++.+|+++.+++.++++       
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35568999999999999999999999999999999975432211   11  1257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC--------CcEEEEecccCCCC--CCCCc
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG--------IQKYVFYSIHNCDK--HPEVP  202 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~--------v~~~V~~Ss~~~~~--~~~~~  202 (399)
                      .+|+|||++|....           ....++|+.+...+++++..    ..        ..++|++||.....  ....+
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  165 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL  165 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence            58999999983221           12245788888887776642    21        24899999876532  34568


Q ss_pred             HHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          203 LMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       203 y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |+.+|...+.+.+.       .++++++++||.+++.........- ....+...- .. ..+...+|++++++.++...
T Consensus       166 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~-~~-~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        166 YCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE-QGQKLVSML-PR-KRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH-HHHHHHhcC-CC-CCCcCHHHHHHHHHHHhChh
Confidence            99999998877632       5899999999999865533221100 000111000 11 13556799999999998753


Q ss_pred             c--cCCcEEEEcCC
Q 015872          276 K--INGRTLTFSGP  287 (399)
Q Consensus       276 ~--~~g~~~~l~~~  287 (399)
                      .  ..|.++.+.++
T Consensus       243 ~~~~~G~~i~~dgg  256 (258)
T PRK06949        243 SQFINGAIISADDG  256 (258)
T ss_pred             hcCCCCcEEEeCCC
Confidence            2  35777777664

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.7e-16  Score=145.29  Aligned_cols=155  Identities=15%  Similarity=0.040  Sum_probs=113.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++..|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.    ...+.++++|++|.+++.++++     
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            4556899999999999999999999999999999997543221   111    1257889999999988877654     


Q ss_pred             --CCCEEEECCCCC---------CCCcchhccHHH----HHHHHHHHHHcCCcEEEEecccCCCC---------------
Q 015872          148 --GVHTVIDCATGR---------PEEPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCDK---------------  197 (399)
Q Consensus       148 --~~d~Vi~~a~~~---------~~~~~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~~---------------  197 (399)
                        ++|+|||+||..         ..+..+++|+.+    +..+++.+++.+..+||++||.+...               
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  172 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY  172 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence              589999999831         112335688888    66677777777667999999875321               


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------CCCCEEE--EecCccccccc
Q 015872          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVI--IRLCGFMQGLI  234 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~~-------~g~~~~i--lRp~~~~~~~~  234 (399)
                      .+..+|+.+|...+.+.+.       .++++++  +.||.+..++.
T Consensus       173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            2335799999999876632       4666554  47998876543

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.5e-16  Score=141.72  Aligned_cols=187  Identities=16%  Similarity=0.146  Sum_probs=132.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc------CCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV------GVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~------~~d  150 (399)
                      ++.++|+||||+|+||..++++|+++|++|++++|+.++......    ..++.++.+|++|++++.++++      .+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            456789999999999999999999999999999997543222111    1257889999999988776653      589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +|||++|....           ....++|+.++.++++++..    .+..++|++||....  ......|+.+|...+.+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  162 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGF  162 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHH
Confidence            99999984322           12235899998888887754    344579988886432  23456799999998876


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ++       ..+++++.+.||.+...........      ...   .....+..++|+|++++.+++++.
T Consensus       163 ~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~------~~~---~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        163 SEALRRELADTGVRVLYLAPRATRTAMNSEAVQA------LNR---ALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHhcccCcEEEEEecCcccccchhhhccc------ccc---cccCCCCCHHHHHHHHHHHHhCCC
Confidence            53       3579999999988765432111000      000   001136678999999999998763

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.68  E-value=1.1e-15  Score=138.51  Aligned_cols=201  Identities=18%  Similarity=0.202  Sum_probs=137.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      |.+|||||+|+||.++++.|+++|++|+++.|...+....    +.  ..++.++.+|++|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            4699999999999999999999999999999842222111    11  1257889999999888776654       589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHH----HHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +|||++|....           ....+.|+.++..    ++..+++.+.+++|++||....  ......|..+|...+.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            99999984321           1123567777666    4455566677899999987532  23456799999988766


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTF  284 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l  284 (399)
                      ++       ..+++++.++|+.+.++............   +...... -.+...+|+++++..++.++  ...|+.+.+
T Consensus       161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~  236 (242)
T TIGR01829       161 TKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNS---IVAQIPV-GRLGRPEEIAAAVAFLASEEAGYITGATLSI  236 (242)
T ss_pred             HHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHH---HHhcCCC-CCCcCHHHHHHHHHHHcCchhcCccCCEEEe
Confidence            53       25899999999998865433221111110   0000011 13456689999998887663  246889999


Q ss_pred             cCCC
Q 015872          285 SGPR  288 (399)
Q Consensus       285 ~~~~  288 (399)
                      .++.
T Consensus       237 ~gg~  240 (242)
T TIGR01829       237 NGGL  240 (242)
T ss_pred             cCCc
Confidence            8874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=139.87  Aligned_cols=207  Identities=13%  Similarity=0.089  Sum_probs=135.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc---cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR---DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~---~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+|+||||+|.||.++++.|+++|++|+++.|+..+...    .+.   ...+.++.+|++|++++.++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999988764332211    111   1247889999999988876664     


Q ss_pred             --CCCEEEECCCCCC------CCcc-----------hhccHHHHHH----HHHHHHHcCCcEEEEecccCC--CCCCCCc
Q 015872          148 --GVHTVIDCATGRP------EEPI-----------KKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC--DKHPEVP  202 (399)
Q Consensus       148 --~~d~Vi~~a~~~~------~~~~-----------~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~  202 (399)
                        .+|++||+||...      ...+           +++|+.+...    ++..+++.+..+||++||...  +......
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAG  164 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCccc
Confidence              5899999997321      1111           2345555444    333344444568999999764  2334567


Q ss_pred             HHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       203 y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |+.+|..++.+.+       ..|+++..+.||.+-.+....+.. .......+....... .+...+|+|.+++.++.++
T Consensus       165 Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~~~~-r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        165 HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELSPLN-RMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHcChh
Confidence            9999999998763       258999999999886554322110 000000000000111 3677899999999998753


Q ss_pred             --ccCCcEEEEcCCC
Q 015872          276 --KINGRTLTFSGPR  288 (399)
Q Consensus       276 --~~~g~~~~l~~~~  288 (399)
                        ...|+.+.+.++.
T Consensus       243 ~~~~~G~~i~vdgg~  257 (260)
T PRK08416        243 ASWLTGQTIVVDGGT  257 (260)
T ss_pred             hhcccCcEEEEcCCe
Confidence              2367888887763

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.1e-16  Score=142.52  Aligned_cols=208  Identities=16%  Similarity=0.110  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.++|+||||+|+||..+++.|+++|++ |++++|+.++...   .+...  .+.++.+|++|++++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45688999999999999999999999999 9999997543221   12122  46678999999988877664       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      ++|+|||++|....           ....++|+.+..++++++.+.    + ..++|++||.....  .....|+.+|..
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a  163 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA  163 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence            58999999984321           112468888888888777542    2 24799999876542  335689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcccccccc---CCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWG---TDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      +|.+.+       ..+++++.++|+++..................+.   ........+++.+|++++++.++.++.  .
T Consensus       164 ~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  243 (260)
T PRK06198        164 LATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLM  243 (260)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCc
Confidence            998764       2568999999999876532110000000000000   000111146789999999999987543  3


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.++.
T Consensus       244 ~G~~~~~~~~~  254 (260)
T PRK06198        244 TGSVIDFDQSV  254 (260)
T ss_pred             cCceEeECCcc
Confidence            68888888764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.68  E-value=1.4e-15  Score=138.69  Aligned_cols=202  Identities=17%  Similarity=0.143  Sum_probs=136.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----ccC----CcEEEEccCCCCCcHHHHhc-------CC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RDW----GATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~~----~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +|+||||+|+||.++++.|+++|++|++++|+..+..+.+    ...    .+..+++|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            3899999999999999999999999999999733222111    111    13457899999988876653       58


Q ss_pred             CEEEECCCCCCCC-----------cchhccHH----HHHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWE----GKVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~----~~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |+|||++|.....           ...++|+.    ++.+++.++++.+.++||++||....  ......|+.+|...+.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999833211           12246766    77788888888778899999997653  2345679999999987


Q ss_pred             HHHh-------C--CCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          213 FLQD-------S--GLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       213 ~l~~-------~--g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      +.+.       .  +++++.++|+.+.++.............  ......... ..+.+++|+|++++.++.++.  ..|
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g  239 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL-GRLGEPDDVAHAVLYLASDESRFVTG  239 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC-CCCcCHHHHHHHHHHHcCccccCccC
Confidence            7642       2  4888999999887665433211110000  001011111 135678999999999876532  356


Q ss_pred             cEEEEcCC
Q 015872          280 RTLTFSGP  287 (399)
Q Consensus       280 ~~~~l~~~  287 (399)
                      ..+.+.++
T Consensus       240 ~~i~~~~g  247 (251)
T PRK07069        240 AELVIDGG  247 (251)
T ss_pred             CEEEECCC
Confidence            77777665

>PRK08589 short chain dehydrogenase; Validated

Probab=99.68  E-value=1.3e-15  Score=140.90  Aligned_cols=204  Identities=15%  Similarity=0.146  Sum_probs=138.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++|+++||||+|+||.++++.|+++|++|++++|+ ++....   +..  .++.++.+|++|++++.++++       .
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999997 432221   111  247889999999988776654       5


Q ss_pred             CCEEEECCCCCCC-C-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-E-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +|++||+||.... .           ...++|+.+...+++++    ++.+ .++|++||.....  .....|+.+|...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            8999999984321 1           12246777776555544    4444 5899999976532  3456899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcc--ccccc----cCCCCcceeceeHHHHHHHHHHHHhCC--
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE--EKSVW----GTDALTRIAYMDTQDIARLTFVALRNE--  275 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~v~v~Dva~~i~~~l~~~--  275 (399)
                      +.+.+       ..|+++..+.||.+...........-..  +....    ...+..  .+...+|+|++++.++.++  
T Consensus       162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~s~~~~  239 (272)
T PRK08589        162 INFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLG--RLGKPEEVAKLVVFLASDDSS  239 (272)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCC--CCcCHHHHHHHHHHHcCchhc
Confidence            98764       3589999999998875543221100000  00000    000111  3567899999999998753  


Q ss_pred             ccCCcEEEEcCCC
Q 015872          276 KINGRTLTFSGPR  288 (399)
Q Consensus       276 ~~~g~~~~l~~~~  288 (399)
                      ...|+++.+.++.
T Consensus       240 ~~~G~~i~vdgg~  252 (272)
T PRK08589        240 FITGETIRIDGGV  252 (272)
T ss_pred             CcCCCEEEECCCc
Confidence            3467888888764

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.2e-15  Score=138.59  Aligned_cols=207  Identities=18%  Similarity=0.144  Sum_probs=141.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--ccccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +..++++||||+|+||+++++.|+++|++|++++|+....  ...+.  ..++.++++|++|++++.++++       .+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999974311  11111  1246789999999988877764       57


Q ss_pred             CEEEECCCCCCC--------C---cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC---CCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRPE--------E---PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD---KHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~~--------~---~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~E  211 (399)
                      |+|||++|....        +   ...++|+.++..+++++..    .+..++|++||....   ......|+.+|...+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~  163 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIV  163 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHH
Confidence            999999993211        1   1245788899888887653    345689999986542   234567999999998


Q ss_pred             HHHHh-------CCCCEEEEecCcccccccccchhhhc--ccccc---ccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          212 QFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPIL--EEKSV---WGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      .+.+.       .+++++.++||.+.++..........  ....+   ........ .+...+|+|+++..++...  ..
T Consensus       164 ~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~va~~~~~l~~~~~~~~  242 (263)
T PRK08226        164 GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLR-RLADPLEVGELAAFLASDESSYL  242 (263)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCC-CCCCHHHHHHHHHHHcCchhcCC
Confidence            77642       47999999999887654332110000  00000   00000111 3568899999998888643  34


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.|+.
T Consensus       243 ~g~~i~~dgg~  253 (263)
T PRK08226        243 TGTQNVIDGGS  253 (263)
T ss_pred             cCceEeECCCc
Confidence            67788887763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.6e-15  Score=143.79  Aligned_cols=190  Identities=12%  Similarity=0.085  Sum_probs=133.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHh-------c
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATL-------V  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~-------~  147 (399)
                      .+..++|+||||+|.||.++++.|+++|++|++++|+.+...+   .+...  .+.++.+|++|++++.+++       .
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3456899999999999999999999999999999997543221   12222  4667899999998887776       3


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      ++|++||+||....           ....++|+.++.++..++    ++.+..++|++||.....  .....|+.+|...
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal  163 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGL  163 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHH
Confidence            68999999983211           123468888888876665    344456899999876432  2346799999987


Q ss_pred             HHHHH-------h-CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQ-------D-SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~-------~-~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+       + .+++++.+.||.+..+...... ... +.     .......+.+.+|+|++++.++++++
T Consensus       164 ~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~-~~~-~~-----~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        164 RGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA-NYT-GR-----RLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc-ccc-cc-----cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            76542       2 3799999999988765432211 000 00     00111246788999999999998765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.67  E-value=1.6e-15  Score=139.77  Aligned_cols=204  Identities=16%  Similarity=0.113  Sum_probs=141.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.....    ..++.++++|++|++++.++++       .+|+|
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            455789999999999999999999999999999998754422    2367889999999988877654       57999


Q ss_pred             EECCCCCCC--------------------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC--CCCCCcHHHH
Q 015872          153 IDCATGRPE--------------------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       153 i~~a~~~~~--------------------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                      ||+||....                    +...++|+.++..+++++...    +-.+||++||....  ......|+.+
T Consensus        82 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (266)
T PRK06171         82 VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAAT  161 (266)
T ss_pred             EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHH
Confidence            999983211                    113458899998888887643    33589999987653  2345789999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccc-cccccchhhhc---ccc------ccccC--CCCcceeceeHHHHHHH
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQ-GLIGQYAVPIL---EEK------SVWGT--DALTRIAYMDTQDIARL  267 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~-~~~~~~~~~~~---~~~------~~~~~--~~~~~~~~v~v~Dva~~  267 (399)
                      |...+.+.+       ..|+++.+++||.+.. .+.........   .+.      ..+..  .-... .+...+|+|.+
T Consensus       162 K~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~eva~~  240 (266)
T PRK06171        162 KAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLG-RSGKLSEVADL  240 (266)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCC-CCCCHHHhhhh
Confidence            999998763       2589999999998752 22111000000   000      00000  00111 35677999999


Q ss_pred             HHHHHhCCc--cCCcEEEEcCCC
Q 015872          268 TFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       268 i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      +..++....  ..|+++++.++.
T Consensus       241 ~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        241 VCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             eeeeeccccccceeeEEEecCcc
Confidence            999987533  367888887763

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.3e-15  Score=137.47  Aligned_cols=185  Identities=12%  Similarity=0.158  Sum_probs=132.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----------cccc--CCcEEEEccCCCCCcHHHHhc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRD--WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----------~l~~--~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .+.+++++||||+|+||.++++.|+++|++|++++|+.++...          .+..  .++.++++|++|++++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            3456899999999999999999999999999999997543211          0111  246789999999998877765


Q ss_pred             -------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCC----CCCC
Q 015872          148 -------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK----HPEV  201 (399)
Q Consensus       148 -------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~----~~~~  201 (399)
                             ++|+|||++|....           +...++|+.++.++++++...    +-.++|++||.....    .+..
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  162 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHT  162 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcc
Confidence                   68999999983211           223458999999999988643    234899999864322    3457


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCccc-ccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFM-QGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      +|+.+|..+|.+.+       ..+++++.+.|+.+. ......    ...+..      .. ..+...+|+|++++.++.
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~----~~~~~~------~~-~~~~~p~~va~~~~~l~~  231 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN----LLGGDE------AM-RRSRTPEIMADAAYEILS  231 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh----cccccc------cc-cccCCHHHHHHHHHHHhc
Confidence            89999999998774       258999999998543 222111    111110      11 146678999999999997


Q ss_pred             CC
Q 015872          274 NE  275 (399)
Q Consensus       274 ~~  275 (399)
                      ..
T Consensus       232 ~~  233 (273)
T PRK08278        232 RP  233 (273)
T ss_pred             Cc
Confidence            64

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=1.5e-15  Score=142.79  Aligned_cols=201  Identities=19%  Similarity=0.144  Sum_probs=136.4

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----ccccc--CCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRD--WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~--~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ..++.++++||||+|+||.+++++|+++|++|++.+|+.....    ..+..  ..+.++.+|++|.+++.++++     
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            3456789999999999999999999999999999988643221    11222  246789999999888776654     


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--------C---CcEEEEecccCCC--CCCCCc
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--------G---IQKYVFYSIHNCD--KHPEVP  202 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--------~---v~~~V~~Ss~~~~--~~~~~~  202 (399)
                       .+|+|||+||....           ....++|+.++.++++++..+        +   ..++|++||....  ......
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  167 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN  167 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCch
Confidence             58999999983221           123458999999988876421        1   1489999987543  223457


Q ss_pred             HHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       203 y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |+.+|..++.+.+       ..|+++..+.|+. .............   ...    .....++..+|++.++..++...
T Consensus       168 Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~---~~~----~~~~~~~~pe~va~~v~~L~s~~  239 (306)
T PRK07792        168 YGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP---DVE----AGGIDPLSPEHVVPLVQFLASPA  239 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc---hhh----hhccCCCCHHHHHHHHHHHcCcc
Confidence            9999999997753       3689999999973 2221111110000   000    01124567899999999888653


Q ss_pred             --ccCCcEEEEcCC
Q 015872          276 --KINGRTLTFSGP  287 (399)
Q Consensus       276 --~~~g~~~~l~~~  287 (399)
                        ...|++|.+.++
T Consensus       240 ~~~~tG~~~~v~gg  253 (306)
T PRK07792        240 AAEVNGQVFIVYGP  253 (306)
T ss_pred             ccCCCCCEEEEcCC
Confidence              246777777654

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8.8e-16  Score=137.71  Aligned_cols=187  Identities=17%  Similarity=0.154  Sum_probs=136.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc----CCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~----~~d~Vi~~a~~~  159 (399)
                      |+++||||+|.||+++++.|+++|++|++++|+.++........+++++++|++|++++.++++    .+|++||++|..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            3699999999999999999999999999999975443322223357889999999998887775    589999998721


Q ss_pred             -----C--------CC---cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCCCCCCcHHHHHHHHHHHHH------
Q 015872          160 -----P--------EE---PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQ------  215 (399)
Q Consensus       160 -----~--------~~---~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~------  215 (399)
                           +        .+   ...++|+.++..+++++...  .-.++|++||...  .....|+.+|...+.+.+      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~~~Y~asKaal~~~~~~la~e~  158 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--PAGSAEAAIKAALSNWTAGQAAVF  158 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--CCccccHHHHHHHHHHHHHHHHHh
Confidence                 1        11   12357888888888877542  1248999998762  345789999999997763      


Q ss_pred             -hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCC
Q 015872          216 -DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPR  288 (399)
Q Consensus       216 -~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~  288 (399)
                       ..|+++..+.||.+.......    . .         ..  +.-..+|+++++..++..+  ...|+++.+.|+.
T Consensus       159 ~~~gI~v~~v~PG~v~t~~~~~----~-~---------~~--p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        159 GTRGITINAVACGRSVQPGYDG----L-S---------RT--PPPVAAEIARLALFLTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             hhcCeEEEEEecCccCchhhhh----c-c---------CC--CCCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence             368999999999886432110    0 0         00  1126699999999998753  3367888887764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.67  E-value=9.4e-16  Score=139.28  Aligned_cols=177  Identities=14%  Similarity=0.079  Sum_probs=122.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .++.++++||||+|+||.++++.|+++|++|++++|+..+............+.+|++|.+++.+.+.++|++||+||..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            34568999999999999999999999999999999975222111111123678899999999998898999999999842


Q ss_pred             C--------CCcchhccHHHHHHHHHHHHHc-------CCcEEEEeccc-CCCCCCCCcHHHHHHHHHHHH---H-----
Q 015872          160 P--------EEPIKKVDWEGKVALIQCAKAM-------GIQKYVFYSIH-NCDKHPEVPLMEIKYCTEQFL---Q-----  215 (399)
Q Consensus       160 ~--------~~~~~~~n~~~~~~l~~aa~~~-------~v~~~V~~Ss~-~~~~~~~~~y~~~K~~~E~~l---~-----  215 (399)
                      .        .....++|+.++..+++++...       +-..++..||. +........|+.+|...+.+.   +     
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~Y~aSKaal~~~~~l~~~l~~e  170 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPSYEISKRLIGQLVSLKKNLLDK  170 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            2        1223468999999988877542       11223333443 322223456999999985432   1     


Q ss_pred             --hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          216 --DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                        ..++.++.+.||.+...+.                  .  ...+..+|+|+.++.++++++
T Consensus       171 ~~~~~i~v~~~~pg~~~t~~~------------------~--~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        171 NERKKLIIRKLILGPFRSELN------------------P--IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             hcccccEEEEecCCCcccccC------------------c--cCCCCHHHHHHHHHHHHhcCC
Confidence              3577788888876543210                  0  024677999999999998754

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.67  E-value=6e-16  Score=126.65  Aligned_cols=151  Identities=22%  Similarity=0.239  Sum_probs=129.8

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      -.|.+|.++|.||||-+|+.+++++++.+  .+|+++.|..  .........+.....|....+++...++++|+.|+|-
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~--~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaL   91 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRE--LPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCAL   91 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEecc--CCCccccceeeeEEechHHHHHHHhhhcCCceEEEee
Confidence            35667899999999999999999999998  5899999873  2222233456777889888888989999999999998


Q ss_pred             CC----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCcccc
Q 015872          157 TG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLCGFMQ  231 (399)
Q Consensus       157 ~~----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~-~~ilRp~~~~~  231 (399)
                      |.    ...+.+++++.+-...++++|++.|+++||.+||.+++......|...|-++|.-+.+..++ ++|+|||.+.+
T Consensus        92 gTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~  171 (238)
T KOG4039|consen   92 GTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLYMKMKGEVERDVIELDFKHIIILRPGPLLG  171 (238)
T ss_pred             cccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceeeeeccchhhhhhhhccccEEEEecCcceec
Confidence            83    33577889999999999999999999999999999999999999999999999999998876 78999998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=142.51  Aligned_cols=196  Identities=14%  Similarity=0.083  Sum_probs=132.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc-cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~-~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++..++|+||||+|.||.++++.|+++|++|++++|+.++....   +. ...+..+++|++|.+++.++++       .
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35568999999999999999999999999999999975432221   11 1234556799999988876653       5


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|+|||++|....           +...++|+.++.++++++...   +..+||++||.....  .....|+.+|...+.
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  165 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEA  165 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHH
Confidence            8999999994221           123468999999888887542   235899999976542  344689999999998


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +.+       ..|+.++++.||.+..+..............+...-......++..+|+|++++.++.+.
T Consensus       166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        166 FANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            763       368999999999887554322110000000000000000114567889999998888764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.66  E-value=1.5e-15  Score=138.93  Aligned_cols=206  Identities=14%  Similarity=0.086  Sum_probs=140.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .+..++++||||+|.||.+++++|++.|++|++++|..... .+.+..  ..+..+++|++|.+++.++++       .+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            35568999999999999999999999999999887753211 112221  246788999999988877764       58


Q ss_pred             CEEEECCCCCC-----------CCcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      |++||+||...           .....++|+.++..+++++...    + -.++|++||.....  .....|+.+|...+
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVM  166 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHH
Confidence            99999998321           1223468999998888876542    2 24799999876433  22358999999998


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+.......+.............-+..  .+...+|+|++++.++.+..  ..|+++
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~eva~~~~~l~s~~~~~~~G~~~  244 (253)
T PRK08993        167 GVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAG--RWGLPSDLMGPVVFLASSASDYINGYTI  244 (253)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            7763       268999999999997654322110000000011110111  36677999999999997642  357777


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.++
T Consensus       245 ~~dgg  249 (253)
T PRK08993        245 AVDGG  249 (253)
T ss_pred             EECCC
Confidence            77665

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=138.34  Aligned_cols=199  Identities=14%  Similarity=0.116  Sum_probs=131.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc---cCCcEEEEccCCCCCcHHHHhcCC-----------
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLVGV-----------  149 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~---~~~v~~~~~Dl~d~~~l~~~~~~~-----------  149 (399)
                      |+|+||||+|+||++++++|+++|++|++++|+..+....+.   ..+++++++|++|.+++.++++.+           
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            689999999999999999999999999999997532211111   235788999999999888777521           


Q ss_pred             CEEEECCCCC-CCC-----------cchhccHHHHHHHHH----HHHHcC-CcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          150 HTVIDCATGR-PEE-----------PIKKVDWEGKVALIQ----CAKAMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       150 d~Vi~~a~~~-~~~-----------~~~~~n~~~~~~l~~----aa~~~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      +++||++|.. +..           ...++|+.+...+++    .+++.+ .++||++||....  ..+...|+.+|...
T Consensus        82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~  161 (251)
T PRK06924         82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGL  161 (251)
T ss_pred             eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHH
Confidence            2788998832 111           123467777555444    444433 4589999987643  23456799999999


Q ss_pred             HHHHH---------hCCCCEEEEecCcccccccccchhhhcccc-----ccccCCCCcceeceeHHHHHHHHHHHHhC-C
Q 015872          211 EQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-----SVWGTDALTRIAYMDTQDIARLTFVALRN-E  275 (399)
Q Consensus       211 E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~-~  275 (399)
                      +.+.+         ..++++..++||.+..+...... ......     ......+..  .+..++|+|++++.++.+ .
T Consensus       162 ~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~l~~~~~  238 (251)
T PRK06924        162 DMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIR-SSSKEDFTNLDRFITLKEEG--KLLSPEYVAKALRNLLETED  238 (251)
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHH-hcCcccchHHHHHHHHhhcC--CcCCHHHHHHHHHHHHhccc
Confidence            98763         24688999999988755432110 000000     000000011  367889999999999987 4


Q ss_pred             ccCCcEEEEc
Q 015872          276 KINGRTLTFS  285 (399)
Q Consensus       276 ~~~g~~~~l~  285 (399)
                      ...|+.+.+.
T Consensus       239 ~~~G~~~~v~  248 (251)
T PRK06924        239 FPNGEVIDID  248 (251)
T ss_pred             CCCCCEeehh
Confidence            4456666553

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.2e-15  Score=137.66  Aligned_cols=202  Identities=15%  Similarity=0.165  Sum_probs=139.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      |+++||||+|.||.++++.|+++|++|++++|+..+....   +.  ...+.++++|++|++++.++++       .+|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            6799999999999999999999999999999975432211   11  1257789999999988876653       5799


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      |||++|....           ....++|+.++.++++++.+    .+ -.+||++||.....  ....+|+.+|...+.+
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~  161 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAM  161 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHH
Confidence            9999983211           22356899999998888843    22 25899999876532  3346799999999877


Q ss_pred             HH--------hCCCCEEEEecCccccccc-ccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          214 LQ--------DSGLPHVIIRLCGFMQGLI-GQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       214 l~--------~~g~~~~ilRp~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      .+        ..|+++..++||.+..... ..+.. ..... .+. ...... .+...+|+++++..++..+  ...|++
T Consensus       162 ~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (252)
T PRK07677        162 TRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAK-RTI-QSVPLG-RLGTPEEIAGLAYFLLSDEAAYINGTC  238 (252)
T ss_pred             HHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHH-HHh-ccCCCC-CCCCHHHHHHHHHHHcCccccccCCCE
Confidence            64        2489999999998873221 11100 00000 000 000111 3667899999999888653  346788


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +.+.++.
T Consensus       239 ~~~~gg~  245 (252)
T PRK07677        239 ITMDGGQ  245 (252)
T ss_pred             EEECCCe
Confidence            8888764

>TIGR02415 23BDH acetoin reductases

Probab=99.66  E-value=1.6e-15  Score=138.70  Aligned_cols=204  Identities=15%  Similarity=0.167  Sum_probs=137.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      |+++||||+|+||.+++++|++.|++|+++.|+......   .+..  ..+.++.+|++|++++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            469999999999999999999999999999997432211   1221  247789999999998877653       5799


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCC-cEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      |||++|....           +..+++|+.++..+++++.    +.+. .++|++||....  ......|+.+|...+.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  160 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL  160 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence            9999984221           1224578888876665554    3332 589999986542  33457899999999987


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchhhhcccc--------ccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK--------SVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      .+.       .++.+++++||.+................        ..+...-... .+.+.+|+++++..++.++.  
T Consensus       161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       161 TQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALG-RPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCC-CCCCHHHHHHHHHhhcccccCC
Confidence            642       47999999999876543222111000000        0000000011 37788999999999998753  


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|.++.+.++.
T Consensus       240 ~~g~~~~~d~g~  251 (254)
T TIGR02415       240 ITGQSILVDGGM  251 (254)
T ss_pred             ccCcEEEecCCc
Confidence            357777777654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.66  E-value=6.7e-16  Score=146.36  Aligned_cols=151  Identities=13%  Similarity=0.133  Sum_probs=111.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.+++|+||||+|+||.++++.|+++|++|++++|+..+....   +.  ...+.++++|++|.+++.++++       .
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            3468899999999999999999999999999999975432211   11  1257889999999998877764       3


Q ss_pred             CCEEEECCCCCCC------------CcchhccHHHHHHHHHHHHH----cC--CcEEEEecccCCC--------------
Q 015872          149 VHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKA----MG--IQKYVFYSIHNCD--------------  196 (399)
Q Consensus       149 ~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~----~~--v~~~V~~Ss~~~~--------------  196 (399)
                      +|+|||+||....            +..+++|+.|+.++++++..    .+  ..|||++||....              
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            8999999983211            22346899998888777654    22  3599999985421              


Q ss_pred             -----------------------CCCCCcHHHHHHHHHHHH----Hh----CCCCEEEEecCcccc
Q 015872          197 -----------------------KHPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLCGFMQ  231 (399)
Q Consensus       197 -----------------------~~~~~~y~~~K~~~E~~l----~~----~g~~~~ilRp~~~~~  231 (399)
                                             ..+..+|+.+|...+.+.    ++    .|+.++.++||++++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                                   012357999998876543    32    479999999999964

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.3e-15  Score=135.68  Aligned_cols=208  Identities=14%  Similarity=0.089  Sum_probs=138.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc----CCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD----WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~----~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      +++.++++||||+|.||.++++.|+++|++|++++|+.++..+   .+..    ..+..+.+|++|.+++.++++     
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3556899999999999999999999999999999997543221   1111    246788999999988766553     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHH----HHHHHcCCcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~----~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                        .+|+|||+||.....           ...++|+.+...+.    ..+++.+..++|++||.....  .....|+.+|.
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKa  164 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARA  164 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHH
Confidence              589999999843211           11245666554444    444555556999999976532  23467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccc---------cCCCCcceeceeHHHHHHHHHHHH
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVW---------GTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+.+.+       +.|++++.++||.+..+.....+.........+         ...-... .+...+|+|.+++.++
T Consensus       165 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~~va~~~~~L~  243 (265)
T PRK07062        165 GLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLG-RLGRPDEAARALFFLA  243 (265)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcC-CCCCHHHHHHHHHHHh
Confidence            8876653       368999999999887554322111000000000         0000111 3567799999999988


Q ss_pred             hCC--ccCCcEEEEcCCC
Q 015872          273 RNE--KINGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~--~~~g~~~~l~~~~  288 (399)
                      .+.  ...|+++.+.++.
T Consensus       244 s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        244 SPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CchhcccccceEEEcCce
Confidence            753  3468888888763

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.65  E-value=2.1e-15  Score=138.73  Aligned_cols=206  Identities=14%  Similarity=0.129  Sum_probs=138.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.++++||||+|+||.+++++|+++|++|++++|+.+...+...  ...+..+++|+.|.+++.++++       .+|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            456899999999999999999999999999999997543222111  1247789999999887766654       5799


Q ss_pred             EEECCCCC----C------------CCcchhccHHHHHHHHHHHHHcC---CcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          152 VIDCATGR----P------------EEPIKKVDWEGKVALIQCAKAMG---IQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       152 Vi~~a~~~----~------------~~~~~~~n~~~~~~l~~aa~~~~---v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +||+||..    +            .....++|+.++..+++++...-   -.++|++||.....  .....|+.+|...
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  162 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAV  162 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHH
Confidence            99999831    1            11345789999999888886531   14688888765432  2345799999999


Q ss_pred             HHHHHh------CCCCEEEEecCcccccccccchhhhccc-------cccccCCCCcceeceeHHHHHHHHHHHHhCC-c
Q 015872          211 EQFLQD------SGLPHVIIRLCGFMQGLIGQYAVPILEE-------KSVWGTDALTRIAYMDTQDIARLTFVALRNE-K  276 (399)
Q Consensus       211 E~~l~~------~g~~~~ilRp~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-~  276 (399)
                      +.+.+.      ..+++..+.||.+...............       .......-... .+...+|+|.+++.++.++ .
T Consensus       163 ~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~eva~~~~~l~s~~~~  241 (262)
T TIGR03325       163 VGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIG-RMPDAEEYTGAYVFFATRGDT  241 (262)
T ss_pred             HHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCC-CCCChHHhhhheeeeecCCCc
Confidence            987632      2388999999988755432110000000       00000000111 3567799999999988753 2


Q ss_pred             --cCCcEEEEcCC
Q 015872          277 --INGRTLTFSGP  287 (399)
Q Consensus       277 --~~g~~~~l~~~  287 (399)
                        ..|.++.+.++
T Consensus       242 ~~~tG~~i~vdgg  254 (262)
T TIGR03325       242 VPATGAVLNYDGG  254 (262)
T ss_pred             ccccceEEEecCC
Confidence              36788888776

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.65  E-value=2.8e-15  Score=137.93  Aligned_cols=206  Identities=15%  Similarity=0.108  Sum_probs=140.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.++++||||+|+||.+++++|+++|++|++++|+.++......  ..++.++++|++|.+++.++++       .+|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            456899999999999999999999999999999997543322111  1247889999999888776654       5899


Q ss_pred             EEECCCCCC---------CC-------cchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          152 VIDCATGRP---------EE-------PIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       152 Vi~~a~~~~---------~~-------~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +||++|...         .+       ...++|+.++..+++++...   .-.++|++||.....  .....|+.+|...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAV  163 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHH
Confidence            999998321         11       12468888888887777532   124799999876532  3446799999999


Q ss_pred             HHHHHh------CCCCEEEEecCcccccccccchhh----hccc----cccccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          211 EQFLQD------SGLPHVIIRLCGFMQGLIGQYAVP----ILEE----KSVWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       211 E~~l~~------~g~~~~ilRp~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      +.+.+.      .++++..+.||.+...+.......    ....    ...+....... .+...+|+|.+++.++.++ 
T Consensus       164 ~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~eva~~~~fl~s~~~  242 (263)
T PRK06200        164 VGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQ-FAPQPEDHTGPYVLLASRRN  242 (263)
T ss_pred             HHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCC-CCCCHHHHhhhhhheecccc
Confidence            987642      358999999998865432211000    0000    00000000111 3667899999999998754 


Q ss_pred             c--cCCcEEEEcCC
Q 015872          276 K--INGRTLTFSGP  287 (399)
Q Consensus       276 ~--~~g~~~~l~~~  287 (399)
                      .  ..|+++.+.++
T Consensus       243 ~~~itG~~i~vdgG  256 (263)
T PRK06200        243 SRALTGVVINADGG  256 (263)
T ss_pred             cCcccceEEEEcCc
Confidence            2  36788888776

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.64  E-value=1.2e-14  Score=133.44  Aligned_cols=206  Identities=15%  Similarity=0.081  Sum_probs=137.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.++++||||+|.||.++++.|+++|++|+++.|+..+...    .+..  .++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3556899999999999999999999999999998886433211    1111  246688999999988776654      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHH----HHHHHHHcCC-cEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVA----LIQCAKAMGI-QKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~----l~~aa~~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                       .+|++||++|...+.           ...++|+.+...    +++.+++.+. .++|++||....  ..+...|+.+|.
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  163 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKG  163 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHH
Confidence             589999999943221           123577776654    4445555543 589999997543  234568999998


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccch-hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA-VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ..+.+.+       ..|++++.++||.+......... ...... .+ ....... .+...+|+++++..++..+  ...
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        164 GVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRA-DV-ESMIPMG-YIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHH-HH-HhcCCCC-CCcCHHHHHHHHHHHcCcccCCcc
Confidence            8876653       35899999999988765432111 000000 00 0000111 4667899999999988753  235


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |..+.+.++.
T Consensus       241 G~~i~~d~g~  250 (261)
T PRK08936        241 GITLFADGGM  250 (261)
T ss_pred             CcEEEECCCc
Confidence            7777777653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.64  E-value=5.4e-15  Score=142.42  Aligned_cols=177  Identities=14%  Similarity=0.089  Sum_probs=123.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.++......  ..++..+.+|++|++++.+.++++|++||+||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            4556899999999999999999999999999999997543322121  12467889999999999999999999999998


Q ss_pred             CCC--------CCcchhccHHHHHHHHHHHHH----cCC----cEEEEecccCCCCCCCCcHHHHHHHHHHHH--Hh--C
Q 015872          158 GRP--------EEPIKKVDWEGKVALIQCAKA----MGI----QKYVFYSIHNCDKHPEVPLMEIKYCTEQFL--QD--S  217 (399)
Q Consensus       158 ~~~--------~~~~~~~n~~~~~~l~~aa~~----~~v----~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l--~~--~  217 (399)
                      ...        .....++|+.++.++++++..    .+.    ..+|.+|+..........|+.+|...+.+.  ++  .
T Consensus       255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y~ASKaAl~~l~~l~~~~~  334 (406)
T PRK07424        255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLYELSKRALGDLVTLRRLDA  334 (406)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            431        133457899999999888743    221    235666654432222346999999998854  22  3


Q ss_pred             CCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          218 GLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       218 g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ++.+..+.||.+..+.                    .+...+..+|+|+.++.++++++
T Consensus       335 ~~~I~~i~~gp~~t~~--------------------~~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        335 PCVVRKLILGPFKSNL--------------------NPIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CCceEEEEeCCCcCCC--------------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence            4445555554432111                    01124677999999999998765

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.4e-15  Score=139.13  Aligned_cols=189  Identities=14%  Similarity=0.109  Sum_probs=128.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccC---CcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW---GATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~---~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      |+++||||+|.||.++++.|+++|++|++++|+.+.....   +...   .+.++.+|++|++++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999975432111   1111   24557899999887766553       489


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----c-CCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----M-GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~-~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      +|||++|....           ....++|+.++..+++++..    . ...+||++||....  ......|+.+|...+.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            99999984221           22346899999998888642    2 23589999987542  2234579999998876


Q ss_pred             HH-------HhCCCCEEEEecCcccccccccchhhhcc-ccc---cccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          213 FL-------QDSGLPHVIIRLCGFMQGLIGQYAVPILE-EKS---VWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       213 ~l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.       ...++++++++||.+.++........... ...   .+..  ......+..+|+|++++.++.+
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD--RFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH--hcccCCCCHHHHHHHHHHHHhc
Confidence            55       24689999999999986654332100000 000   0000  0111357889999999999964

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=9.1e-15  Score=133.66  Aligned_cols=203  Identities=11%  Similarity=0.096  Sum_probs=139.4

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+++||||+  +.||..++++|+++|++|++..|+. +..+.   +....+..+++|++|++++.++++       
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3557899999999  7999999999999999999999872 22111   222357789999999988876653       


Q ss_pred             CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                      .+|++||+||....               +...++|+.+...+.+++...-  -.++|++||.+...  .....|+.+|.
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa  162 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKA  162 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHH
Confidence            58999999984221               1123578888877777665431  24899999876532  23467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      ..+.+.+       ..|+++..|.||.+-.........  ...+   .+....... .+...+|+|+++..++...  ..
T Consensus       163 al~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~---~~~~~~p~~-r~~~pedva~~~~~l~s~~~~~i  238 (252)
T PRK06079        163 ALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLK---ESDSRTVDG-VGVTIEEVGNTAAFLLSDLSTGV  238 (252)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHH---HHHhcCccc-CCCCHHHHHHHHHHHhCcccccc
Confidence            9998763       368999999999887553322110  0000   000000111 3677899999999999763  33


Q ss_pred             CCcEEEEcCC
Q 015872          278 NGRTLTFSGP  287 (399)
Q Consensus       278 ~g~~~~l~~~  287 (399)
                      .|+++.+.++
T Consensus       239 tG~~i~vdgg  248 (252)
T PRK06079        239 TGDIIYVDKG  248 (252)
T ss_pred             cccEEEeCCc
Confidence            6788888776

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.63  E-value=9.4e-15  Score=150.84  Aligned_cols=209  Identities=17%  Similarity=0.206  Sum_probs=139.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++..|+||||||+|+||.+++++|+++|++|++++|+.+....   .+.    ...+..+++|++|.+++.++++     
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4557899999999999999999999999999999997543211   111    1246688999999998887775     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHH----HHHHHcCC-cEEEEecccCCC--CCCCCcHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALI----QCAKAMGI-QKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~----~aa~~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                        ++|+|||+||.....           ...++|+.+...+.    ..+++.+. .+||++||....  ......|+.+|
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK  570 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK  570 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence              689999999943211           11246666665544    44444442 489999986542  23456899999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCccccc--cccc-chhh-hcc-c------cccccCCCCcceeceeHHHHHHHHH
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQG--LIGQ-YAVP-ILE-E------KSVWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~--~~~~-~~~~-~~~-~------~~~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      ...+.+.+.       .|+++..++|+.+..+  +... +... ... +      ...+......+ .+++.+|+|++++
T Consensus       571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~-r~v~peDVA~av~  649 (676)
T TIGR02632       571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLK-RHIFPADIAEAVF  649 (676)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcC-CCcCHHHHHHHHH
Confidence            999987742       5799999999988631  1111 1000 000 0      01111111112 4688999999999


Q ss_pred             HHHhCC--ccCCcEEEEcCCCC
Q 015872          270 VALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       270 ~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      .++.+.  ...|.++++.|+..
T Consensus       650 ~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       650 FLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHhCCcccCCcCcEEEECCCch
Confidence            988653  34588999988753

>PRK06484 short chain dehydrogenase; Validated

Probab=99.62  E-value=5.2e-15  Score=149.53  Aligned_cols=206  Identities=13%  Similarity=0.103  Sum_probs=143.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      ..|+++||||+|.||.++++.|+++|++|++++|+.++.......  ..+..+.+|++|++++.++++       .+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999974432221111  245678999999988877664       48999


Q ss_pred             EECCCCCCC------------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          153 IDCATGRPE------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       153 i~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      ||+||....            +...++|+.++.++++++...  +-.+||++||....  ..+...|+.+|...+.+.+ 
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~  427 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRS  427 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHH
Confidence            999984311            123468999999988887653  23589999997653  2345789999999997763 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                            ..|+++..++||.+..................+....... .+...+|+|++++.++...  ...|+++.+.++
T Consensus       428 la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        428 LACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG-RLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence                  2589999999998876543221100000000000000011 3567899999999998753  246888988876


Q ss_pred             C
Q 015872          288 R  288 (399)
Q Consensus       288 ~  288 (399)
                      .
T Consensus       507 ~  507 (520)
T PRK06484        507 W  507 (520)
T ss_pred             c
Confidence            3

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.3e-14  Score=131.44  Aligned_cols=190  Identities=11%  Similarity=0.028  Sum_probs=130.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCC--CcHHHHh------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKP--ETIPATL------  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~--~~l~~~~------  146 (399)
                      ++.++|+||||+|+||.++++.|+++|++|++++|+.+.....   +.   ...+..+.+|+.|.  +++.+++      
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999985432211   11   12466788999763  3343332      


Q ss_pred             --cCCCEEEECCCCCCC----C--------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHH
Q 015872          147 --VGVHTVIDCATGRPE----E--------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       147 --~~~d~Vi~~a~~~~~----~--------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                        ..+|+|||+||....    .        ...++|+.++.++++++..    .+..++|++||.....  .....|+.+
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGAS  163 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHh
Confidence              468999999983211    1        1246889998887777643    3456899999865432  223579999


Q ss_pred             HHHHHHHHHh-------C-CCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC--Cc
Q 015872          207 KYCTEQFLQD-------S-GLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN--EK  276 (399)
Q Consensus       207 K~~~E~~l~~-------~-g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~--~~  276 (399)
                      |...+.+.+.       . ++++++++||.+.+.......    .+       .... .+...+|++.++..++..  ..
T Consensus       164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~----~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~  231 (239)
T PRK08703        164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH----PG-------EAKS-ERKSYGDVLPAFVWWASAESKG  231 (239)
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC----CC-------CCcc-ccCCHHHHHHHHHHHhCccccC
Confidence            9999987632       2 589999999999865432211    00       0111 356779999999999974  33


Q ss_pred             cCCcEE
Q 015872          277 INGRTL  282 (399)
Q Consensus       277 ~~g~~~  282 (399)
                      ..|++.
T Consensus       232 ~~g~~~  237 (239)
T PRK08703        232 RSGEIV  237 (239)
T ss_pred             cCCeEe
Confidence            345554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.62  E-value=2e-14  Score=132.57  Aligned_cols=201  Identities=17%  Similarity=0.067  Sum_probs=132.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----ccc---CCcEEEEccCCCCCcHH----HHh------
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD---WGATVVNADLSKPETIP----ATL------  146 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~---~~v~~~~~Dl~d~~~l~----~~~------  146 (399)
                      +.++||||+|+||.++++.|+++|++|+++.|+.++..+.    +..   ..+..+.+|++|.+++.    +++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999987653322211    111   13557899999987552    222      


Q ss_pred             -cCCCEEEECCCCCC--------CC--------------cchhccHHHHHHHHHHHHHcC----------CcEEEEeccc
Q 015872          147 -VGVHTVIDCATGRP--------EE--------------PIKKVDWEGKVALIQCAKAMG----------IQKYVFYSIH  193 (399)
Q Consensus       147 -~~~d~Vi~~a~~~~--------~~--------------~~~~~n~~~~~~l~~aa~~~~----------v~~~V~~Ss~  193 (399)
                       .++|+|||+||...        ..              ..+++|+.+...+++++....          ..++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             36899999998321        11              225688888888877654321          1368888876


Q ss_pred             CCC--CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccc-cccchhhhccccccccCCCCcceeceeHHH
Q 015872          194 NCD--KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGL-IGQYAVPILEEKSVWGTDALTRIAYMDTQD  263 (399)
Q Consensus       194 ~~~--~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  263 (399)
                      ...  ..+..+|+.+|..++.+.+       ..|++++.|+||.+.... ...-........ .    +.. ..+...+|
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~~  235 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRK-V----PLG-QREASAEQ  235 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHh-C----CCC-cCCCCHHH
Confidence            543  2345689999999998764       268999999999874221 000000000000 0    011 13467799


Q ss_pred             HHHHHHHHHhCC--ccCCcEEEEcCCCCC
Q 015872          264 IARLTFVALRNE--KINGRTLTFSGPRAW  290 (399)
Q Consensus       264 va~~i~~~l~~~--~~~g~~~~l~~~~~~  290 (399)
                      ++++++.++.+.  ...|+.+.+.++..+
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       236 IADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHHHHHhCcccCCcccceEEECCceec
Confidence            999999998764  236788888876543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.62  E-value=5e-15  Score=137.17  Aligned_cols=202  Identities=17%  Similarity=0.140  Sum_probs=135.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc------CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV------GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~------~~d~  151 (399)
                      +|.++|||| |+||.++++.|. +|++|++++|+.++...   .+..  ..+.++++|++|++++.++++      .+|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899998 799999999996 89999999997543221   1222  246789999999988877764      5899


Q ss_pred             EEECCCCC----CCCcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCCC---------------------------
Q 015872          152 VIDCATGR----PEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDKH---------------------------  198 (399)
Q Consensus       152 Vi~~a~~~----~~~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~~---------------------------  198 (399)
                      |||+||..    .....+++|+.++.++++++...  .-.++|++||......                           
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP  159 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence            99999943    23345679999999998887653  1134566776543211                           


Q ss_pred             -----CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccc--cccccCCCCcceeceeHHHH
Q 015872          199 -----PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE--KSVWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       199 -----~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~v~Dv  264 (399)
                           +...|+.+|...+.+.+       ..|+++..+.||.+...............  ..+.... ... .+...+|+
T Consensus       160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-p~~-r~~~peei  237 (275)
T PRK06940        160 DAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS-PAG-RPGTPDEI  237 (275)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC-Ccc-cCCCHHHH
Confidence                 23579999999887653       36899999999988765432211000000  0000000 111 36788999


Q ss_pred             HHHHHHHHhCC--ccCCcEEEEcCCC
Q 015872          265 ARLTFVALRNE--KINGRTLTFSGPR  288 (399)
Q Consensus       265 a~~i~~~l~~~--~~~g~~~~l~~~~  288 (399)
                      |++++.++.+.  ...|.++.+.++.
T Consensus       238 a~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        238 AALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             HHHHHHHcCcccCcccCceEEEcCCe
Confidence            99999988653  3367888887763

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.62  E-value=5.6e-15  Score=133.82  Aligned_cols=197  Identities=14%  Similarity=0.138  Sum_probs=135.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      |+||||+|+||.++++.|+++|++|.+++|...+...    .+..  .++.++.+|++|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999876433211    1111  247889999999988876654       47999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHH-----HcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~-----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l  214 (399)
                      ||++|....           ....++|+.++.++++++.     +.+..+||++||...  .......|+.+|...+.+.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            999983221           1234588899988887652     234568999998653  2234568999999887655


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      +       ..|++++.++||.+..+........ ...  ....- ... .+...+|++++++.++.++.  ..|.+..+.
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~--~~~~~-~~~-~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  235 (239)
T TIGR01831       161 KALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-LDE--ALKTV-PMN-RMGQPAEVASLAGFLMSDGASYVTRQVISVN  235 (239)
T ss_pred             HHHHHHHhHhCeEEEEEEEccCccccchhhhHH-HHH--HHhcC-CCC-CCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            3       3589999999998876554322111 100  00000 111 35577999999999998632  356677776


Q ss_pred             CC
Q 015872          286 GP  287 (399)
Q Consensus       286 ~~  287 (399)
                      |+
T Consensus       236 gg  237 (239)
T TIGR01831       236 GG  237 (239)
T ss_pred             CC
Confidence            65

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.1e-14  Score=128.25  Aligned_cols=174  Identities=19%  Similarity=0.230  Sum_probs=128.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~~~~  160 (399)
                      |+++||||+|.||.++++.|+++ ++|++++|+..            .+++|++|++++.++++   ++|+|||++|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999999 99999999732            36899999999888776   6899999998322


Q ss_pred             C--------Ccc---hhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH------hCCC
Q 015872          161 E--------EPI---KKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ------DSGL  219 (399)
Q Consensus       161 ~--------~~~---~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~------~~g~  219 (399)
                      .        +.+   .++|+.++.++++++...  +..+|+++||....  ......|+.+|...+.+.+      ..|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi  147 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALELPRGI  147 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHccCCe
Confidence            1        112   357888888888887653  23479999986543  2344579999999987764      3589


Q ss_pred             CEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEE
Q 015872          220 PHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF  284 (399)
Q Consensus       220 ~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l  284 (399)
                      ++..++||.+-.... .+       ...+.   .  ..++..+|+|+++..+++.. ..|++|++
T Consensus       148 ~v~~i~Pg~v~t~~~-~~-------~~~~~---~--~~~~~~~~~a~~~~~~~~~~-~~g~~~~~  198 (199)
T PRK07578        148 RINVVSPTVLTESLE-KY-------GPFFP---G--FEPVPAARVALAYVRSVEGA-QTGEVYKV  198 (199)
T ss_pred             EEEEEcCCcccCchh-hh-------hhcCC---C--CCCCCHHHHHHHHHHHhccc-eeeEEecc
Confidence            999999987754321 00       01111   1  14678899999999999864 45677765

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.8e-14  Score=129.09  Aligned_cols=184  Identities=16%  Similarity=0.170  Sum_probs=133.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh---c--CCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---V--GVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~---~--~~d~Vi~~a~  157 (399)
                      |++++||||+|+||++++++|++.|++|++++|+.++. +.+...+++++.+|++|.+++.+++   .  .+|+|||++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-AALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-HHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            36899999999999999999999999999999975433 3344456788999999999887754   2  4899999998


Q ss_pred             CCC-------------CCcchhccHHHHHHHHHHHHHc---CCcEEEEecccCC-CC-CC---CCcHHHHHHHHHHHHHh
Q 015872          158 GRP-------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC-DK-HP---EVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       158 ~~~-------------~~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~-~~-~~---~~~y~~~K~~~E~~l~~  216 (399)
                      ...             .+...++|+.++.++++++...   +-.++|++||... .. .+   ...|+.+|...+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (222)
T PRK06953         80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA  159 (222)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHH
Confidence            431             0223468999999998888642   2247889888543 22 12   23599999999988754


Q ss_pred             -----CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          217 -----SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       217 -----~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                           .+++++.++||++......                 +  ...+..+|.+..+..++....  ..+..|...+
T Consensus       160 ~~~~~~~i~v~~v~Pg~i~t~~~~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (222)
T PRK06953        160 ASLQARHATCIALHPGWVRTDMGG-----------------A--QAALDPAQSVAGMRRVIAQATRRDNGRFFQYDG  217 (222)
T ss_pred             HhhhccCcEEEEECCCeeecCCCC-----------------C--CCCCCHHHHHHHHHHHHHhcCcccCceEEeeCC
Confidence                 3678899999887654321                 0  124566899999999877643  2455665554

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3e-14  Score=130.70  Aligned_cols=208  Identities=17%  Similarity=0.115  Sum_probs=141.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCCCcHHHHhc---CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATLV---GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~---~~d  150 (399)
                      .++.++|+||||+|.+|.++++.|+++|++|++++|+.++....   +.   ..++.++.+|++|++++.++++   .+|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            34568999999999999999999999999999999975432221   11   1246789999999988877664   589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      ++||++|....           ...+++|+.+...+++++    ++.+-.++|++||.....  .....|..+|...+.+
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~  163 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAF  163 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHH
Confidence            99999984321           112357888877776665    444445899998875432  2334678999999877


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchhhh----ccccc---cccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAVPI----LEEKS---VWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      .+.       .|++++.+.||.+............    +....   .+....... .+...+|+|++++.++.+.  ..
T Consensus       164 ~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~~~~~~~  242 (259)
T PRK06125        164 TRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLG-RPATPEEVADLVAFLASPRSGYT  242 (259)
T ss_pred             HHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcC-CCcCHHHHHHHHHHHcCchhccc
Confidence            643       5899999999988765432211100    00000   000000111 3568899999999998753  24


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|.++.+.|+.
T Consensus       243 ~G~~i~vdgg~  253 (259)
T PRK06125        243 SGTVVTVDGGI  253 (259)
T ss_pred             cCceEEecCCe
Confidence            68888888774

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.62  E-value=3.6e-15  Score=127.33  Aligned_cols=209  Identities=13%  Similarity=0.084  Sum_probs=155.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC-CCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT-GRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~-~~~~  161 (399)
                      ..+.++.|+.||.|.++++...+.|+.|-.+.|+..+....-..-.+.+..+|.....-+...+.++..|+-+++ ....
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~  131 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI  131 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence            357899999999999999999999999999999865433222222588899998877777778889999999988 4556


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH-HhCCCCEEEEecCcccccc-cc--
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL-QDSGLPHVIIRLCGFMQGL-IG--  235 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l-~~~g~~~~ilRp~~~~~~~-~~--  235 (399)
                      ..+.++|-+...+-+.+|.++|+++|+|+|....  ...-...|..+|+++|.-+ ...+.+-+++|||.+|+.. .+  
T Consensus       132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~  211 (283)
T KOG4288|consen  132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGI  211 (283)
T ss_pred             HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceeecccccCcc
Confidence            6777889999999999999999999999998654  3334457999999999655 6688999999999999631 00  


Q ss_pred             --------cchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHH
Q 015872          236 --------QYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCE  300 (399)
Q Consensus       236 --------~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~  300 (399)
                              ..+....+.-    .-.+.-+....+.+.+++||.+.+.++++|.-.|         .+++.|+.+.-.
T Consensus       212 ~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G---------vv~i~eI~~~a~  279 (283)
T KOG4288|consen  212 KSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG---------VVTIEEIKKAAH  279 (283)
T ss_pred             cccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc---------eeeHHHHHHHHH
Confidence                    0111111111    1111122444589999999999999999986432         466677666543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.62  E-value=6.5e-15  Score=135.16  Aligned_cols=204  Identities=18%  Similarity=0.136  Sum_probs=134.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc-CCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD-WGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      |+|+||||+|.||..++++|+++|++|++++|+.+...+   .+.. .++.++++|++|++++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            579999999999999999999999999999997543221   1111 257789999999988877663       68999


Q ss_pred             EECCCCCC--C--------Ccc---hhccHHHHHH----HHHHHH-HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          153 IDCATGRP--E--------EPI---KKVDWEGKVA----LIQCAK-AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~~--~--------~~~---~~~n~~~~~~----l~~aa~-~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ||++|...  .        +.+   ..+|+.+...    ++.... +.+..+||++||....  ..+...|+.+|...+.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            99998421  0        111   1345554433    333333 2334589999998654  2345679999999988


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccc-----cc----cccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-----KS----VWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      +.+       ..|+++..+.||.+-............+.     ..    .+......+ .+...+|+|++++.++..+ 
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLK-RTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCcc-CCCCHHHHHHHHHHHcCccc
Confidence            764       25799999999988654332111100000     00    000000111 3667899999999998764 


Q ss_pred             -ccCCcEEEEcCCC
Q 015872          276 -KINGRTLTFSGPR  288 (399)
Q Consensus       276 -~~~g~~~~l~~~~  288 (399)
                       ...|.++.+.|+.
T Consensus       240 ~~itG~~i~vdgg~  253 (259)
T PRK08340        240 EYMLGSTIVFDGAM  253 (259)
T ss_pred             ccccCceEeecCCc
Confidence             3467888888764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.9e-14  Score=132.22  Aligned_cols=204  Identities=15%  Similarity=0.129  Sum_probs=139.8

Q ss_pred             CCCCCeEEEEcCCC-hhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATG-TLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG-~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      .+..++++||||+| .||.++++.|+++|++|++.+|+..+....   +.    ...+.++++|++|++++.++++    
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34568899999998 699999999999999999999875432221   11    1247789999999988876664    


Q ss_pred             ---CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 ---GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                         .+|+|||++|....           ....++|+.+...+++++..    .+ -.++|++||....  ..+...|+.+
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  173 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA  173 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence               57999999984221           11234788888777776643    22 3588998876542  3455679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      |...+.+.+       ..|+++..++||.+...+...... .....   +....... .+...+|+|++++.++.+..  
T Consensus       174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~---~~~~~~~~-r~~~p~~va~~~~~l~s~~~~~  249 (262)
T PRK07831        174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE---LAAREAFG-RAAEPWEVANVIAFLASDYSSY  249 (262)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH---HHhcCCCC-CCcCHHHHHHHHHHHcCchhcC
Confidence            999998764       268999999999887654332110 00000   00000111 36677999999999987643  


Q ss_pred             cCCcEEEEcCC
Q 015872          277 INGRTLTFSGP  287 (399)
Q Consensus       277 ~~g~~~~l~~~  287 (399)
                      ..|+++.+.++
T Consensus       250 itG~~i~v~~~  260 (262)
T PRK07831        250 LTGEVVSVSSQ  260 (262)
T ss_pred             cCCceEEeCCC
Confidence            46788877764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=2.2e-14  Score=130.68  Aligned_cols=191  Identities=18%  Similarity=0.157  Sum_probs=130.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc---CCcEEEEccCC--CCCcHHHH-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD---WGATVVNADLS--KPETIPAT-------  145 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~---~~v~~~~~Dl~--d~~~l~~~-------  145 (399)
                      .+.++|+||||+|+||.+++++|++.|++|++++|+..+...   .+..   ..+.++.+|++  +.+++.++       
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999997543211   1111   24677888886  44444333       


Q ss_pred             hcCCCEEEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHH
Q 015872          146 LVGVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       146 ~~~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                      +..+|+|||+|+....            ....++|+.++.++++++    ++.+.++||++||....  ......|+.+|
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  169 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSK  169 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHH
Confidence            3468999999983211            123458888887777766    45567899999987542  23456899999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+++.       .+++++.++|+.+.........          ... . ...+...+|+++++..++.++.  ..
T Consensus       170 ~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~----------~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (247)
T PRK08945        170 FATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF----------PGE-D-PQKLKTPEDIMPLYLYLMGDDSRRKN  237 (247)
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc----------Ccc-c-ccCCCCHHHHHHHHHHHhCccccccC
Confidence            999987642       4788999999877543211110          000 0 1135677999999999886543  34


Q ss_pred             CcEEE
Q 015872          279 GRTLT  283 (399)
Q Consensus       279 g~~~~  283 (399)
                      |+++.
T Consensus       238 g~~~~  242 (247)
T PRK08945        238 GQSFD  242 (247)
T ss_pred             CeEEe
Confidence            55543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.61  E-value=6e-15  Score=137.38  Aligned_cols=202  Identities=14%  Similarity=0.111  Sum_probs=137.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC---------CCCc---ccccc--CCcEEEEccCCCCCcHHHHh
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR---------PAPA---DFLRD--WGATVVNADLSKPETIPATL  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~---------~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~  146 (399)
                      ++.++++||||++.||.++++.|++.|++|++++|+.         +...   +.+..  ..+.++.+|++|++++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4568899999999999999999999999999998764         1111   11111  24678899999988877665


Q ss_pred             c-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC------CcEEEEecccCCC--
Q 015872          147 V-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG------IQKYVFYSIHNCD--  196 (399)
Q Consensus       147 ~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~------v~~~V~~Ss~~~~--  196 (399)
                      +       .+|++||+||....           ....++|+.++..+++++..    .+      -.+||++||....  
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            3       58999999983221           22346888988777766642    11      1489999987542  


Q ss_pred             CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHH
Q 015872          197 KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      ......|+.+|..++.+.+       ..|+++..|.|+ +...............      .+..++.+...+|+|++++
T Consensus       164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~------~~~~~~~~~~pedva~~~~  236 (286)
T PRK07791        164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAK------PEEGEFDAMAPENVSPLVV  236 (286)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhc------CcccccCCCCHHHHHHHHH
Confidence            2345689999999987763       368999999997 4333221111111110      0111123567899999999


Q ss_pred             HHHhCC--ccCCcEEEEcCCCC
Q 015872          270 VALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       270 ~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      .++...  ...|+.+.+.++..
T Consensus       237 ~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        237 WLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHhCchhcCCCCcEEEEcCCce
Confidence            998653  34688888887753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.3e-15  Score=131.24  Aligned_cols=150  Identities=15%  Similarity=0.132  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-----CCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vi~~a~  157 (399)
                      +++|+||||+|++|+++++.|+++|++|++++|+..+........++.++.+|++|++++.++++     ++|+|||++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            36799999999999999999999999999999986543221122367889999999988877665     5899999998


Q ss_pred             CCCC-------------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC-----CCCCcHHHHHHHHHHHHH-
Q 015872          158 GRPE-------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK-----HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       158 ~~~~-------------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~-----~~~~~y~~~K~~~E~~l~-  215 (399)
                      ....             .....+|+.++..+++++...   +..+++++||.....     .+...|+.+|...+.+++ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~  160 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS  160 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence            3211             112347888888888777543   234788888753321     133469999999998874 


Q ss_pred             ------hCCCCEEEEecCccccc
Q 015872          216 ------DSGLPHVIIRLCGFMQG  232 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~  232 (399)
                            ..++.+..++||.+-..
T Consensus       161 l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        161 FVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHhhcCCeEEEEEcCCceecC
Confidence                  25788999999887644

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.1e-14  Score=151.39  Aligned_cols=183  Identities=17%  Similarity=0.231  Sum_probs=135.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.+...+.   +.  ..++.++.+|++|.+++.++++       
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999975432221   11  1247889999999998887765       


Q ss_pred             CCCEEEECCCCCCC-------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                      ++|+|||+||....             ....++|+.++.+++.++    ++.+..+||++||.+...  .....|+.+|.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  527 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKA  527 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHH
Confidence            58999999983211             122457888887765554    455667999999987643  33467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      ..+.+.+       ..|+++++++||.+..++....        ..+     .....+..+++|+.++.++.+.
T Consensus       528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~--------~~~-----~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT--------KRY-----NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc--------ccc-----cCCCCCCHHHHHHHHHHHHHhC
Confidence            9998763       3689999999999876543211        001     0124577899999999988654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=5.7e-14  Score=128.68  Aligned_cols=200  Identities=14%  Similarity=0.100  Sum_probs=134.4

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCC--------Cc------cccccC--CcEEEEccCCCCCcH
Q 015872           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPA--------PA------DFLRDW--GATVVNADLSKPETI  142 (399)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~--------~~------~~l~~~--~v~~~~~Dl~d~~~l  142 (399)
                      ++.++|+||||+|  .||.+++++|+++|++|++..|....        ..      +.+...  .+.++++|++|.+++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4568999999995  89999999999999999987643110        00      111112  467889999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCCCC--C
Q 015872          143 PATLV-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCDK--H  198 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~~--~  198 (399)
                      .+++.       .+|+|||++|....           +..+++|+.+...+..    .+++.+-.+||++||.....  .
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV  163 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence            77763       47999999983221           1124578887766643    33443445999999987542  3


Q ss_pred             CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHH
Q 015872          199 PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      +...|+.+|..++.+.+       ..|++++.++||.+...............  ..    ... .+...+|+|++++.+
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~--~~----~~~-~~~~~~d~a~~~~~l  236 (256)
T PRK12859        164 GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLP--MF----PFG-RIGEPKDAARLIKFL  236 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHh--cC----CCC-CCcCHHHHHHHHHHH
Confidence            45679999999987753       36899999999988755332211110000  00    111 245679999999998


Q ss_pred             HhCC--ccCCcEEEEcCC
Q 015872          272 LRNE--KINGRTLTFSGP  287 (399)
Q Consensus       272 l~~~--~~~g~~~~l~~~  287 (399)
                      +...  ...|+++.+.++
T Consensus       237 ~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        237 ASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             hCccccCccCcEEEeCCC
Confidence            8653  236778887765

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=1.9e-14  Score=142.64  Aligned_cols=205  Identities=16%  Similarity=0.152  Sum_probs=140.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--ccccccCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLRDWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ++..++++||||+|.||..+++.|+++|++|++++|.....  .+.....+..++.+|++|.+++.++++       ++|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            34568999999999999999999999999999998853211  111122356789999999888776654       589


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcCC----cEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGI----QKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~v----~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +|||++|....           +...++|+.++.++.+++.....    .+||++||....  ......|+.+|...+.+
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~  366 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGL  366 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHH
Confidence            99999994321           12345899999999999876433    589999987542  34457899999987766


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTF  284 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l  284 (399)
                      ++       ..|+.+..+.||.+-......+.....+....+.   .. ......+|+|+++..++...  ...|+++.+
T Consensus       367 ~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~---~l-~~~~~p~dva~~~~~l~s~~~~~itG~~i~v  442 (450)
T PRK08261        367 VQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMN---SL-QQGGLPVDVAETIAWLASPASGGVTGNVVRV  442 (450)
T ss_pred             HHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcC---Cc-CCCCCHHHHHHHHHHHhChhhcCCCCCEEEE
Confidence            52       4689999999998754332211100000000000   00 02234579999999988653  235888888


Q ss_pred             cCCC
Q 015872          285 SGPR  288 (399)
Q Consensus       285 ~~~~  288 (399)
                      .|+.
T Consensus       443 ~g~~  446 (450)
T PRK08261        443 CGQS  446 (450)
T ss_pred             CCCc
Confidence            7753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=1.2e-13  Score=126.69  Aligned_cols=205  Identities=15%  Similarity=0.162  Sum_probs=138.3

Q ss_pred             CCCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCC--ccccc-c-CCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLR-D-WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~-~-~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+++.|.++||||+  +.||.+++++|+++|++|.+.+|+....  .+.+. . ..+.++++|++|.+++.++++     
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            34567899999998  5999999999999999999999874321  11111 1 135678999999988876653     


Q ss_pred             --CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHH
Q 015872          148 --GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                        .+|++||+||..+.               +...++|+.+...+++++...  .-.++|++||.+...  .....|+.+
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~as  165 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPV  165 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHH
Confidence              58999999984321               122367888888877766432  114799999876532  234579999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--  275 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--  275 (399)
                      |...+.+.+       ..|+++..+.||.+.........  ....+.   +....... .+...+|+|++++.++.++  
T Consensus       166 Kaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~p~~-r~~~p~dva~~~~~L~s~~~~  241 (258)
T PRK07533        166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLED---AAERAPLR-RLVDIDDVGAVAAFLASDAAR  241 (258)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHH---HHhcCCcC-CCCCHHHHHHHHHHHhChhhc
Confidence            999987653       36899999999988755432110  000000   00000111 3567899999999998763  


Q ss_pred             ccCCcEEEEcCC
Q 015872          276 KINGRTLTFSGP  287 (399)
Q Consensus       276 ~~~g~~~~l~~~  287 (399)
                      ...|+.+.+.++
T Consensus       242 ~itG~~i~vdgg  253 (258)
T PRK07533        242 RLTGNTLYIDGG  253 (258)
T ss_pred             cccCcEEeeCCc
Confidence            346788888775

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.1e-14  Score=137.31  Aligned_cols=155  Identities=20%  Similarity=0.151  Sum_probs=112.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      +++.++++||||+|+||.+++++|+++|++|++++|+.++..+.   +.    ...+.++++|+.|.+++.++++     
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999999999975432221   11    1257889999999988876654     


Q ss_pred             --CCCEEEECCCCCCC----------CcchhccHHHHHHHHHHHHH---cCCcEEEEecccCCCC--------------C
Q 015872          148 --GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCDK--------------H  198 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~~---~~v~~~V~~Ss~~~~~--------------~  198 (399)
                        .+|++||+||....          +..+.+|+.+...+.+.+..   .+..++|++||.....              .
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~  170 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA  170 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc
Confidence              48999999983211          12346788887666655542   2335899999875321              2


Q ss_pred             CCCcHHHHHHHHHHHHHh---------CCCCEEEEecCccccccc
Q 015872          199 PEVPLMEIKYCTEQFLQD---------SGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~~---------~g~~~~ilRp~~~~~~~~  234 (399)
                      +...|+.+|...+.+.++         .|+.+..+.||.+..++.
T Consensus       171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            335699999999876532         468999999998875543

>PRK05855 short chain dehydrogenase; Validated

Probab=99.57  E-value=4.9e-14  Score=144.26  Aligned_cols=154  Identities=16%  Similarity=0.077  Sum_probs=116.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+..++++||||+|+||.+++++|+++|++|++++|+.++..+   .++.  .++.++.+|++|++++.++++       
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4556899999999999999999999999999999997543221   1221  246889999999988877764       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      .+|+|||+||....           ....++|+.|+.++++++.    +.+ -.+||++||.....  .....|+.+|..
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  471 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAA  471 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHH
Confidence            48999999994221           1223589999888777653    333 24899999986543  345789999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~  233 (399)
                      .+.+.+       +.|++++.++||.+-.++
T Consensus       472 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        472 VLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence            987653       368999999999886544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=1.1e-13  Score=128.05  Aligned_cols=205  Identities=12%  Similarity=0.121  Sum_probs=136.2

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCC--CCcccc-ccCC-cEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRP--APADFL-RDWG-ATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l-~~~~-v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +..|.++||||+  +.||..+++.|+++|++|++.+|+..  +..+.+ ...+ ...+++|++|.+++.++++       
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456899999997  79999999999999999999998732  111111 1111 1578999999988876653       


Q ss_pred             CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                      .+|++||+||..+.               +..+++|+.+...+.+++...-  -.++|++||.+...  .....|+.+|.
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  162 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKA  162 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHH
Confidence            58999999994221               1123688888877777665321  14899999875432  23357999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ..+.+.+       ..|+++..+.||.+......... . .....-+. ...... .+...+|+|++++.++.+.  ...
T Consensus       163 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~~pl~-r~~~pedva~~v~fL~s~~~~~it  239 (274)
T PRK08415        163 ALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG-D-FRMILKWNEINAPLK-KNVSIEEVGNSGMYLLSDLSSGVT  239 (274)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc-h-hhHHhhhhhhhCchh-ccCCHHHHHHHHHHHhhhhhhccc
Confidence            9987753       36899999999988653221110 0 00000000 000111 3567899999999998753  346


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+.+.+.++.
T Consensus       240 G~~i~vdGG~  249 (274)
T PRK08415        240 GEIHYVDAGY  249 (274)
T ss_pred             ccEEEEcCcc
Confidence            7888888774

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.56  E-value=3.1e-13  Score=122.07  Aligned_cols=189  Identities=14%  Similarity=0.152  Sum_probs=127.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH---hcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---LVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~~~~d~Vi~~a~~  158 (399)
                      |+|+||||+|+||++++++|+++|  +.|....|+....   ....++.++++|++|.+++.++   +.++|+|||++|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            579999999999999999999985  5666666653321   2234678899999998876654   4578999999994


Q ss_pred             CC------CC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--C---CCCCCcHHHHHHHHHH
Q 015872          159 RP------EE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--D---KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       159 ~~------~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~---~~~~~~y~~~K~~~E~  212 (399)
                      ..      ..           ....+|+.+...+..++.    +.+..+++++||...  .   ..+...|+.+|..++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~  157 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNM  157 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHH
Confidence            31      11           123466677666555553    334458998886432  1   1233579999999998


Q ss_pred             HHHh---------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          213 FLQD---------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       213 ~l~~---------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.         .++.+..+.||.+.......+.    ...       ... .+...+|+|++++.++....  ..|..
T Consensus       158 ~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~-------~~~-~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        158 FLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----QNV-------PKG-KLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             HHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----hcc-------ccC-CCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence            7642         3788899999988765432211    000       111 35678999999999998753  35667


Q ss_pred             EEEcCC
Q 015872          282 LTFSGP  287 (399)
Q Consensus       282 ~~l~~~  287 (399)
                      +.+.++
T Consensus       226 ~~~~g~  231 (235)
T PRK09009        226 LAYDGE  231 (235)
T ss_pred             EeeCCc
Confidence            766654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=2.9e-13  Score=124.05  Aligned_cols=204  Identities=12%  Similarity=0.105  Sum_probs=135.9

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCC--cccc----ccCCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFL----RDWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l----~~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ++..|+++||||+  +.||.++++.|+++|++|++..|+....  .+.+    ...++..+++|++|++++.++++    
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            3456889999997  8999999999999999999998753211  1111    12347789999999988776653    


Q ss_pred             ---CCCEEEECCCCCCC----Cc-----------chhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHH
Q 015872          148 ---GVHTVIDCATGRPE----EP-----------IKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLME  205 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~----~~-----------~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~  205 (399)
                         .+|++||++|....    ..           ..++|+.+...+++++...-  -.+||++||.....  .....|+.
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  163 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGV  163 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHH
Confidence               48999999983211    11           12467777766666655321  24899999976532  23467999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +|...+.+.+       ..|+++..|.||.+.........  .....  .+....+..  .+...+|+|++++.++....
T Consensus       164 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~p~~--r~~~p~~va~~~~~l~s~~~  239 (257)
T PRK08594        164 AKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILK--EIEERAPLR--RTTTQEEVGDTAAFLFSDLS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHH--HHhhcCCcc--ccCCHHHHHHHHHHHcCccc
Confidence            9999998763       36899999999988754321110  00000  000000111  35678999999999987532


Q ss_pred             --cCCcEEEEcCC
Q 015872          277 --INGRTLTFSGP  287 (399)
Q Consensus       277 --~~g~~~~l~~~  287 (399)
                        ..|+.+.+.++
T Consensus       240 ~~~tG~~~~~dgg  252 (257)
T PRK08594        240 RGVTGENIHVDSG  252 (257)
T ss_pred             ccccceEEEECCc
Confidence              46788888775

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=1.2e-13  Score=127.63  Aligned_cols=204  Identities=10%  Similarity=0.057  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCC--cccc-ccCC-cEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAP--ADFL-RDWG-ATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l-~~~~-v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      |+.|.++||||++  .||..++++|+++|++|.+..|+....  .+.+ ...+ ...+++|++|.+++.++++       
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4568899999997  999999999999999999998863211  1111 1112 3568999999988876653       


Q ss_pred             CCCEEEECCCCCCC------------C---cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE------------E---PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~---~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                      .+|++||+||....            +   ...++|+.++..+++++...  +-.++|++||....  ......|+.+|.
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  164 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKA  164 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHH
Confidence            58999999984321            1   11347888887776665432  11489999987542  223467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhh--hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP--ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      .++.+.+       ..|+++..|.||.+.......+...  ...   ......... .+...+|+|++++.++..+.  .
T Consensus       165 Al~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~---~~~~~~p~~-r~~~peeva~~~~fL~s~~~~~i  240 (271)
T PRK06505        165 ALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFS---YQQRNSPLR-RTVTIDEVGGSALYLLSDLSSGV  240 (271)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHH---HHhhcCCcc-ccCCHHHHHHHHHHHhCcccccc
Confidence            9987763       3689999999998875432211000  000   000000111 25677999999999987532  3


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.++.
T Consensus       241 tG~~i~vdgG~  251 (271)
T PRK06505        241 TGEIHFVDSGY  251 (271)
T ss_pred             CceEEeecCCc
Confidence            67888888764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=1.3e-13  Score=126.43  Aligned_cols=206  Identities=15%  Similarity=0.087  Sum_probs=136.3

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCCC-CCcccccc---CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRP-APADFLRD---WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~~-~~~~~l~~---~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +..++++||||  ++.||.++++.|+++|++|++.+|+.. +..+.+..   ..+.++++|++|++++.++++       
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45688999999  899999999999999999999988642 22111111   246789999999988776653       


Q ss_pred             CCCEEEECCCCCCC------------Cc---chhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC-CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE------------EP---IKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK-HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~~---~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~-~~~~~y~~~K~~  209 (399)
                      ++|++||+||..+.            +.   ..++|+.+...+.+++...  .-.++|++|+.+... .....|+.+|..
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~~Y~asKaa  164 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDWMGVAKAA  164 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccchhHHHHHH
Confidence            58999999984321            11   1357888877776665432  124789888654332 223568999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+.+       ..|+++..+.||.+.......+.. .......+.........+...+|+|++++.++.++.  ..|+
T Consensus       165 l~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~  243 (256)
T PRK07889        165 LESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-FELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGE  243 (256)
T ss_pred             HHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-cHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccce
Confidence            987753       368999999999887543221100 000000010000111135778999999999997642  3678


Q ss_pred             EEEEcCC
Q 015872          281 TLTFSGP  287 (399)
Q Consensus       281 ~~~l~~~  287 (399)
                      ++.+.++
T Consensus       244 ~i~vdgg  250 (256)
T PRK07889        244 IVHVDGG  250 (256)
T ss_pred             EEEEcCc
Confidence            8888775

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.55  E-value=2e-13  Score=125.26  Aligned_cols=204  Identities=12%  Similarity=0.077  Sum_probs=136.5

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCC-----cccccc--CCcEEEEccCCCCCcHHHHhc----
Q 015872           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLRD--WGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~-----~~~l~~--~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ++.|+++||||+  +.||.+++++|+++|++|.+..|+.+..     .+.+..  ..+.++++|++|++++.++++    
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            456889999986  7999999999999999998887653321     111211  135688999999998876663    


Q ss_pred             ---CCCEEEECCCCCC-------C--------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHH
Q 015872          148 ---GVHTVIDCATGRP-------E--------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLME  205 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~-------~--------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~  205 (399)
                         .+|++||++|...       .        +..+++|+.++..+++++...  .-.++|++||....  ......|+.
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  163 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGV  163 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhH
Confidence               5899999998421       1        122357888887777765432  12589999997643  233467999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +|...+.+.+       ..|+++..+.||.+.......+.  .....  .+ ....... .+...+|+++++..++.++.
T Consensus       164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~--~~-~~~~p~~-r~~~~~dva~~~~fl~s~~~  239 (258)
T PRK07370        164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIH--HV-EEKAPLR-RTVTQTEVGNTAAFLLSDLA  239 (258)
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhh--hh-hhcCCcC-cCCCHHHHHHHHHHHhChhh
Confidence            9999998764       36799999999988654321110  00000  00 0000111 35677999999999997532


Q ss_pred             --cCCcEEEEcCCC
Q 015872          277 --INGRTLTFSGPR  288 (399)
Q Consensus       277 --~~g~~~~l~~~~  288 (399)
                        ..|+++.+.++.
T Consensus       240 ~~~tG~~i~vdgg~  253 (258)
T PRK07370        240 SGITGQTIYVDAGY  253 (258)
T ss_pred             ccccCcEEEECCcc
Confidence              357888887763

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=1.7e-13  Score=126.72  Aligned_cols=206  Identities=9%  Similarity=0.024  Sum_probs=138.4

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCC--CCccccc-cC-CcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRP--APADFLR-DW-GATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l~-~~-~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .|..|+++||||+  +.||.++++.|+++|++|++..|+..  +..+.+. .. ....+++|++|++++.++++      
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3456889999997  89999999999999999998887521  1111111 11 25578999999988877653      


Q ss_pred             -CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 -GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                       .+|++||+||....               ...+++|+.++..+++++...  +-.++|++||.+...  .....|+.+|
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHH
Confidence             58999999984211               112358888888888877653  124899999876432  2345799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      ...+.+.+       ..|+++..+.||.+.......... ...... .....+..  .+...+|+|++++.++...  ..
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~~--r~~~peevA~~~~~L~s~~~~~i  243 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKW-NEYNAPLR--RTVTIEEVGDSALYLLSDLSRGV  243 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHH-HHhCCccc--ccCCHHHHHHHHHHHhCccccCc
Confidence            99987763       368999999999886533211100 000000 00000111  2567899999999999753  34


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|.++.+.++.
T Consensus       244 tG~~i~vdgG~  254 (272)
T PRK08159        244 TGEVHHVDSGY  254 (272)
T ss_pred             cceEEEECCCc
Confidence            68888888874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.54  E-value=8.5e-14  Score=140.70  Aligned_cols=191  Identities=15%  Similarity=0.141  Sum_probs=131.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +.|+++||||++.||..+++.|+++|++|++++|+.+...+.....  ++..+++|++|++++.++++       ++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999999999999999999755433322222  46679999999988877663       58999


Q ss_pred             EECCCCC-C------------CCcchhccHHHHHHHHHHHHHc----CCc-EEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          153 IDCATGR-P------------EEPIKKVDWEGKVALIQCAKAM----GIQ-KYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~-~------------~~~~~~~n~~~~~~l~~aa~~~----~v~-~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ||+||.. +            .....++|+.++..+++++...    +-. ++|++||....  ......|+.+|...+.
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS  163 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence            9999842 1            1123468888888877777543    333 89999987643  2345689999999998


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhh-ccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPI-LEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.+       ..+++++.++||.+............ .....+...-+..  .+...+|+|+++..++..
T Consensus       164 l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        164 LTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLG--RLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCC--CCcCHHHHHHHHHHHhCc
Confidence            763       35899999999987655432211000 0000000000011  356779999999988864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=2.6e-13  Score=124.72  Aligned_cols=204  Identities=13%  Similarity=0.113  Sum_probs=135.2

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCCCC--Cccccc-c-CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLR-D-WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~~~--~~~~l~-~-~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.++++||||  ++.||.++++.|+++|++|++..|....  ..+.+. . .....+++|++|++++.++++       
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45678999997  6799999999999999999998775211  111121 1 134678999999988877663       


Q ss_pred             CCCEEEECCCCCCC--------C-----cc---hhccHHHHHHHHHHHHHc---CCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 GVHTVIDCATGRPE--------E-----PI---KKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~--------~-----~~---~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                      ++|++||+||....        +     .+   .++|+.+...+.+++...   +-.++|++||.+..  ......|+.+
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~as  163 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMA  163 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhH
Confidence            58999999984321        1     11   246777776666554321   22489999987653  2334679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--  275 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--  275 (399)
                      |...+.+.+       ..|+++..+.||.+..........  ....  . +......+ .+...+|+|++++.++.++  
T Consensus       164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~--~-~~~~~p~~-r~~~peevA~~v~~l~s~~~~  239 (261)
T PRK08690        164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLG--H-VAAHNPLR-RNVTIEEVGNTAAFLLSDLSS  239 (261)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHH--H-HhhcCCCC-CCCCHHHHHHHHHHHhCcccC
Confidence            999987753       368999999999887543221110  0000  0 00100111 3677899999999999863  


Q ss_pred             ccCCcEEEEcCCC
Q 015872          276 KINGRTLTFSGPR  288 (399)
Q Consensus       276 ~~~g~~~~l~~~~  288 (399)
                      ...|+++.+.++.
T Consensus       240 ~~tG~~i~vdgG~  252 (261)
T PRK08690        240 GITGEITYVDGGY  252 (261)
T ss_pred             CcceeEEEEcCCc
Confidence            3367888887764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.53  E-value=1.5e-13  Score=124.44  Aligned_cols=189  Identities=16%  Similarity=0.141  Sum_probs=125.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cc----ccCCcEEEEccCCCCCcHHHHh------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FL----RDWGATVVNADLSKPETIPATL------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l----~~~~v~~~~~Dl~d~~~l~~~~------  146 (399)
                      .+..|.|+|||||..||.+++.+|+++|..+..+.|.......   .+    ...++.++++|++|.+++.+++      
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            4557889999999999999999999999998888886443221   11    1124899999999999988665      


Q ss_pred             -cCCCEEEECCCCCC-----------CCcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCCC-C-CCcHHHHHH
Q 015872          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH-P-EVPLMEIKY  208 (399)
Q Consensus       147 -~~~d~Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~~-~-~~~y~~~K~  208 (399)
                       .++|++||+||...           .....++|+.|+..+..++    ++.+-.|||.+||...... | ...|.+||.
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~  168 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH  168 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence             47999999999221           1224468888877766655    5555569999999875432 2 247999999


Q ss_pred             HHHHHHH----h---CCCCEE-EEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHH--HHHHHHhCCc
Q 015872          209 CTEQFLQ----D---SGLPHV-IIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIAR--LTFVALRNEK  276 (399)
Q Consensus       209 ~~E~~l~----~---~g~~~~-ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~--~i~~~l~~~~  276 (399)
                      +.+.+..    |   .+..+. ++-||.+-..+....+......        .....+....|++.  .+..++..+.
T Consensus       169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~  238 (282)
T KOG1205|consen  169 ALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELLGEEGK--------SQQGPFLRTEDVADPEAVAYAISTPP  238 (282)
T ss_pred             HHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhcccccc--------ccccchhhhhhhhhHHHHHHHHhcCc
Confidence            9998762    2   222222 5888887755443221111110        11123444466654  6777666644

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=3.7e-13  Score=123.68  Aligned_cols=204  Identities=13%  Similarity=0.107  Sum_probs=135.5

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCC--CCcccccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP--APADFLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+++||||++  .||.++++.|+++|++|++.+|+..  +..+.+..  ..+..+.+|++|++++.++++       
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            4568899999985  8999999999999999999888621  11111211  135678999999988877663       


Q ss_pred             CCCEEEECCCCCCC-------------C---cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 GVHTVIDCATGRPE-------------E---PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-------------~---~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                      .+|++||+||..+.             +   ...++|+.+...+.+++...  +-.++|++||.+...  .....|+.+|
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asK  163 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  163 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHH
Confidence            47999999983221             1   11256777777776665432  114799999876532  2345799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      ...+.+.+       ..|+++..+.||.+.........  ..+...   ........ .+...+|++.+++.++.++  .
T Consensus       164 aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~---~~~~~p~~-r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        164 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAH---CEAVTPIR-RTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHH---HHHcCCCc-CCCCHHHHHHHHHHHcCccccc
Confidence            99998763       26899999999988653211100  000000   00000111 3567899999999998763  2


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|.++.+.++.
T Consensus       240 itG~~i~vdgg~  251 (262)
T PRK07984        240 ISGEVVHVDGGF  251 (262)
T ss_pred             ccCcEEEECCCc
Confidence            467888887763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=2.4e-13  Score=124.81  Aligned_cols=205  Identities=12%  Similarity=0.082  Sum_probs=135.4

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCC--CCccccccC-C-cEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP--APADFLRDW-G-ATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l~~~-~-v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|.++||||++  .||.++++.|+++|++|++..|+..  +..+.+... + ..++++|++|++++.++++      
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            34568899999997  7999999999999999999888621  111112111 2 3457899999988877663      


Q ss_pred             -CCCEEEECCCCCCC-------C--------cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 -GVHTVIDCATGRPE-------E--------PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-------~--------~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                       .+|++||++|....       .        ...++|+.+...+++++...  .-.++|++||.+...  .....|+.+|
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAK  164 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHH
Confidence             58999999984211       0        12357888877777765422  114899999876532  2346799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      ...+.+.+       ..|+++..+.||.+..........  ....  ......+. . .+...+|+|++++.++..+.  
T Consensus       165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~p~-~-r~~~pedva~~~~~L~s~~~~~  240 (260)
T PRK06603        165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLK--SHAATAPL-K-RNTTQEDVGGAAVYLFSELSKG  240 (260)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHH--HHHhcCCc-C-CCCCHHHHHHHHHHHhCccccc
Confidence            99987653       368999999999886543211100  0000  00000011 1 35678999999999997632  


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+.+.+.++.
T Consensus       241 itG~~i~vdgG~  252 (260)
T PRK06603        241 VTGEIHYVDCGY  252 (260)
T ss_pred             CcceEEEeCCcc
Confidence            367888887763

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.51  E-value=2.8e-13  Score=127.94  Aligned_cols=177  Identities=16%  Similarity=0.110  Sum_probs=122.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc----CCcEEEEccCCC--CCc---HHHHhcC--
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD----WGATVVNADLSK--PET---IPATLVG--  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~----~~v~~~~~Dl~d--~~~---l~~~~~~--  148 (399)
                      .+.++||||||.||.+++++|+++|++|++++|+.++..+   .+..    ..+..+.+|+++  .+.   +.+.+.+  
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999998544221   1111    245678899985  222   2333444  


Q ss_pred             CCEEEECCCCCCC-------------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC----CCCCcHHHHH
Q 015872          149 VHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK----HPEVPLMEIK  207 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~----~~~~~y~~~K  207 (399)
                      +|++||+||....             ....++|+.++..+.+++.    +.+..++|++||.....    .....|+.+|
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK  212 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK  212 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence            5699999984211             1134588888888777654    44566999999976532    2346799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      ...+.+.+       ..|++++.+.||.+..++...      ..         ..+.....+++|+.++..+..
T Consensus       213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------~~---------~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------RR---------SSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------cC---------CCCCCCCHHHHHHHHHHHhCC
Confidence            99997653       368999999999887554220      00         011134668888888888853

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.51  E-value=1.3e-13  Score=118.37  Aligned_cols=146  Identities=19%  Similarity=0.283  Sum_probs=112.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc------cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD------FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~------~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++++|+||+|++|.++++.|+++|+ .|.++.|+..+...      .+..  .++.++.+|+++++++.+++.       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4699999999999999999999996 68888887544321      1111  246678999999887776654       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l  214 (399)
                      .+|.|||+++....           ....++|+.++.++++++++.+.+++|++||...  .......|+.+|...+.+.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~  160 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA  160 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence            36999999983221           2335689999999999998888889999998754  2334567999999999876


Q ss_pred             ---HhCCCCEEEEecCcc
Q 015872          215 ---QDSGLPHVIIRLCGF  229 (399)
Q Consensus       215 ---~~~g~~~~ilRp~~~  229 (399)
                         +..+++++.+.||.+
T Consensus       161 ~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      161 AHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHhcCCceEEEeeccc
Confidence               457899999998765

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK05599 hypothetical protein; Provisional

Probab=99.49  E-value=4.7e-13  Score=121.90  Aligned_cols=186  Identities=19%  Similarity=0.172  Sum_probs=126.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC---CcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW---GATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~---~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      |+++||||++.||..+++.|+ +|++|++++|+.++..+   .++..   .+.++++|++|++++.++++       .+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            569999999999999999998 59999999997543321   12221   36789999999988876653       589


Q ss_pred             EEEECCCCCCC--------C---cchhccHHHHHHHH----HHHHHcC-CcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPE--------E---PIKKVDWEGKVALI----QCAKAMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~--------~---~~~~~n~~~~~~l~----~aa~~~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ++||++|....        .   ....+|+.+...++    ....+.+ -.++|++||....  ......|+.+|...+.
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            99999983211        1   11235666665444    3344432 3589999997543  2335679999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      +.+       ..|+++..+.||.+........     .         ... -....+|+|++++.++.++.. +..+.+.
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-----~---------~~~-~~~~pe~~a~~~~~~~~~~~~-~~~~~~~  223 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGM-----K---------PAP-MSVYPRDVAAAVVSAITSSKR-STTLWIP  223 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchhhcCC-----C---------CCC-CCCCHHHHHHHHHHHHhcCCC-CceEEeC
Confidence            653       3679999999998875532110     0         000 024679999999999988643 3455555


Q ss_pred             C
Q 015872          286 G  286 (399)
Q Consensus       286 ~  286 (399)
                      +
T Consensus       224 ~  224 (246)
T PRK05599        224 G  224 (246)
T ss_pred             c
Confidence            4

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=5.9e-13  Score=122.24  Aligned_cols=206  Identities=13%  Similarity=0.104  Sum_probs=135.1

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCCC--CCcccc-ccC-CcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRP--APADFL-RDW-GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l-~~~-~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.++++||||  ++.||.+++++|+++|++|++..|...  +..+.+ ... ....+++|++|++++.++++       
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            45688999996  679999999999999999998876411  111111 111 23468899999998877763       


Q ss_pred             CCCEEEECCCCCCC-------------Cc---chhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 GVHTVIDCATGRPE-------------EP---IKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-------------~~---~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                      .+|++||+||....             +.   .+++|+.+...+.+++...  +-.++|++||.+...  .....|+.+|
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asK  163 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAK  163 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHH
Confidence            58999999984211             01   2357888887777776543  124899999876532  2345799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ...+.+.+       ..|+++..+.||.+......... ..-.....+....... .+...+|+++++..++..+  ...
T Consensus       164 aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~-r~~~pedva~~~~~l~s~~~~~it  241 (260)
T PRK06997        164 ASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIK-DFGKILDFVESNAPLR-RNVTIEEVGNVAAFLLSDLASGVT  241 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcccc-chhhHHHHHHhcCccc-ccCCHHHHHHHHHHHhCccccCcc
Confidence            99987763       36899999999988653221110 0000000000000111 3567899999999999763  346


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.++.
T Consensus       242 G~~i~vdgg~  251 (260)
T PRK06997        242 GEITHVDSGF  251 (260)
T ss_pred             eeEEEEcCCh
Confidence            7888887763

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.47  E-value=6.1e-13  Score=125.54  Aligned_cols=198  Identities=13%  Similarity=0.162  Sum_probs=127.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHh-------cCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATL-------VGV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~-------~~~  149 (399)
                      +++++||||++.||.++++.|+++| ++|++++|+.++..+   .+.  ...+.++.+|++|.+++.+++       .++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999 999999997543221   111  124678899999998876665       358


Q ss_pred             CEEEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcC--CcEEEEecccCCCC--------------
Q 015872          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMG--IQKYVFYSIHNCDK--------------  197 (399)
Q Consensus       150 d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~--v~~~V~~Ss~~~~~--------------  197 (399)
                      |++||+||....            +...++|+.+...+++++    ++.+  ..+||++||.....              
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  162 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG  162 (314)
T ss_pred             CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence            999999984211            112368888876665544    4432  35999999875421              


Q ss_pred             ---------------------CCCCcHHHHHHHHHHHH----Hh----CCCCEEEEecCccc-ccccccchhhhcccc-c
Q 015872          198 ---------------------HPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLCGFM-QGLIGQYAVPILEEK-S  246 (399)
Q Consensus       198 ---------------------~~~~~y~~~K~~~E~~l----~~----~g~~~~ilRp~~~~-~~~~~~~~~~~~~~~-~  246 (399)
                                           .+...|+.+|.....+.    ++    .|+.++.++||.+. .++..... ...... .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~-~~~~~~~~  241 (314)
T TIGR01289       163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHV-PLFRTLFP  241 (314)
T ss_pred             ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccccc-HHHHHHHH
Confidence                                 12245999999965543    22    47899999999885 33322111 000000 0


Q ss_pred             cccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          247 VWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       247 ~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      .+... .. ..+.+.++.|+.++.++.++.  ..|..|.
T Consensus       242 ~~~~~-~~-~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       242 PFQKY-IT-KGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHH-Hh-ccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            00000 00 125678999999999887643  2354554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.46  E-value=5e-13  Score=122.43  Aligned_cols=189  Identities=14%  Similarity=0.028  Sum_probs=124.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhcC-----
Q 015872           85 SILVVGATGTLGRQIVRRALD----EGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLVG-----  148 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~----~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~~-----  148 (399)
                      .++||||+|.||.+++++|++    .|++|.++.|+.+....   .+.    ...+.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            489999999999999999997    79999999997543221   121    12477899999999888776531     


Q ss_pred             ------CCEEEECCCCCC-----C---------CcchhccHHHHHHHHHHHHH----c-C-CcEEEEecccCCC--CCCC
Q 015872          149 ------VHTVIDCATGRP-----E---------EPIKKVDWEGKVALIQCAKA----M-G-IQKYVFYSIHNCD--KHPE  200 (399)
Q Consensus       149 ------~d~Vi~~a~~~~-----~---------~~~~~~n~~~~~~l~~aa~~----~-~-v~~~V~~Ss~~~~--~~~~  200 (399)
                            .|+|||+||...     .         ...+++|+.++..+.+++..    . + -.++|++||....  ....
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                  258999998311     1         11345788887766655533    2 2 2489999997643  2234


Q ss_pred             CcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHH
Q 015872          201 VPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       201 ~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      ..|+.+|...+.+.+       ..|+.+..+.||.+-.++............  ..+....... .+...+|+|.+++.+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~eva~~~~~l  240 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKG-KLVDPKVSAQKLLSL  240 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcC-CCCCHHHHHHHHHHH
Confidence            679999999998763       257999999999886554322111000000  0000000011 367889999999999


Q ss_pred             HhC
Q 015872          272 LRN  274 (399)
Q Consensus       272 l~~  274 (399)
                      +++
T Consensus       241 ~~~  243 (256)
T TIGR01500       241 LEK  243 (256)
T ss_pred             Hhc
Confidence            964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.46  E-value=2.1e-12  Score=115.99  Aligned_cols=185  Identities=15%  Similarity=0.113  Sum_probs=132.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc---C-CcEEEEccCCCCCcHHHHh-------cC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---W-GATVVNADLSKPETIPATL-------VG  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~---~-~v~~~~~Dl~d~~~l~~~~-------~~  148 (399)
                      +...+.||||||++.+|+.++.+++++|..+.+.+.+.....+..+.   . .+..+.+|++|.+++.+..       .+
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            44567899999999999999999999999999999986544332221   1 3788999999988775554       36


Q ss_pred             CCEEEECCCCCC--------CCc---chhccHHHH----HHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRP--------EEP---IKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~--------~~~---~~~~n~~~~----~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|++||+||..+        .++   .+++|+.+.    ++++..+.+.+-.|+|.++|....  .....+|+.||.++.
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v  194 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAV  194 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHH
Confidence            899999999322        111   235776654    557777777777799999998653  334568999999997


Q ss_pred             HHHH-------h---CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFLQ-------D---SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l~-------~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+       .   .|++.+.+.|+.+-.+.+..        .    .+....++.+..+.+|+.|+.++..+.
T Consensus       195 GfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~--------~----~~~~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  195 GFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG--------A----TPFPTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC--------C----CCCccccCCCCHHHHHHHHHHHHHcCC
Confidence            6532       2   46889999996654332211        1    111333478889999999999998764

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.6e-12  Score=120.58  Aligned_cols=194  Identities=15%  Similarity=0.103  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC---------Cc----cccccC--CcEEEEccCCCCCcHHH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---------PA----DFLRDW--GATVVNADLSKPETIPA  144 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~---------~~----~~l~~~--~v~~~~~Dl~d~~~l~~  144 (399)
                      ++..|+++||||++.||.++++.|++.|++|++++|+..+         ..    +.+...  .+.++++|++|++++.+
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            3556899999999999999999999999999999997421         11    111222  35678999999988876


Q ss_pred             Hhc-------CCCEEEECC-CCC---C-CCc-----------chhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC
Q 015872          145 TLV-------GVHTVIDCA-TGR---P-EEP-----------IKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK  197 (399)
Q Consensus       145 ~~~-------~~d~Vi~~a-~~~---~-~~~-----------~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~  197 (399)
                      +++       .+|++||++ |..   . ...           ..++|+.+...++.++.    +.+-.+||++||.....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            653       589999999 621   1 011           12457777666555553    33335899999864321


Q ss_pred             -----CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHH
Q 015872          198 -----HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQD  263 (399)
Q Consensus       198 -----~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~D  263 (399)
                           .....|+.+|..+..+.+       ..|+++..|.||.+.......... .....  ......+..+ -+...+|
T Consensus       165 ~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~p~~~-~~~~pee  242 (305)
T PRK08303        165 NATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFG-VTEENWRDALAKEPHFA-ISETPRY  242 (305)
T ss_pred             cCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhc-cCccchhhhhccccccc-cCCCHHH
Confidence                 124579999999987763       368999999999886543211100 00000  0000000001 2346799


Q ss_pred             HHHHHHHHHhCC
Q 015872          264 IARLTFVALRNE  275 (399)
Q Consensus       264 va~~i~~~l~~~  275 (399)
                      +|.+++.++.++
T Consensus       243 vA~~v~fL~s~~  254 (305)
T PRK08303        243 VGRAVAALAADP  254 (305)
T ss_pred             HHHHHHHHHcCc
Confidence            999999998765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.39  E-value=7.9e-12  Score=112.30  Aligned_cols=151  Identities=13%  Similarity=0.006  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHh-------c-
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATL-------V-  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~-------~-  147 (399)
                      ++.++++||||++.||..++++|+++|++|.++.|+.++..+.   +..  ..+..+.+|+.|++++.+++       . 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999975543221   111  24667889999998887655       3 


Q ss_pred             CCCEEEECCCCCC-C--------Ccch---hccHHHHHHHH----HHHHHcC-CcEEEEecccCCCCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRP-E--------EPIK---KVDWEGKVALI----QCAKAMG-IQKYVFYSIHNCDKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-~--------~~~~---~~n~~~~~~l~----~aa~~~~-v~~~V~~Ss~~~~~~~~~~y~~~K~~~  210 (399)
                      .+|++||++|... .        +.+.   .+|+.+...++    ...++.+ -..+|++||.... .....|..+|...
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-~~~~~Y~asKaal  161 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-QDLTGVESSNALV  161 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-CCcchhHHHHHHH
Confidence            5899999997321 1        1111   24555544443    3333333 3589999987543 3456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCccccc
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQG  232 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~  232 (399)
                      +.+.+       ..|+++..|.||.+..+
T Consensus       162 ~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        162 SGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            88763       36899999999988755

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.38  E-value=1.1e-11  Score=115.51  Aligned_cols=204  Identities=14%  Similarity=0.078  Sum_probs=129.7

Q ss_pred             CCCCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCCCCCcc-----------c---ccc----CCcEEEEccC--
Q 015872           79 TPVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-----------F---LRD----WGATVVNADL--  136 (399)
Q Consensus        79 ~~~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~-----------~---l~~----~~v~~~~~Dl--  136 (399)
                      .+++.|.++||||  +..||..+++.|++.|.+|++ .|+.+....           .   +..    .....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3467899999999  899999999999999999988 554221100           0   000    1145788898  


Q ss_pred             CCCC------------------cHHHHh-------cCCCEEEECCCCC-----C-----C---CcchhccHHHHHHHHHH
Q 015872          137 SKPE------------------TIPATL-------VGVHTVIDCATGR-----P-----E---EPIKKVDWEGKVALIQC  178 (399)
Q Consensus       137 ~d~~------------------~l~~~~-------~~~d~Vi~~a~~~-----~-----~---~~~~~~n~~~~~~l~~a  178 (399)
                      .+++                  ++.+++       ..+|++||+||..     +     .   ...+++|+.+...++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            4444                  444444       3589999999621     1     1   11235788888777766


Q ss_pred             HHHc---CCcEEEEecccCCC-CCC-C-CcHHHHHHHHHHHHH-------h-CCCCEEEEecCcccccccccchhhhccc
Q 015872          179 AKAM---GIQKYVFYSIHNCD-KHP-E-VPLMEIKYCTEQFLQ-------D-SGLPHVIIRLCGFMQGLIGQYAVPILEE  244 (399)
Q Consensus       179 a~~~---~v~~~V~~Ss~~~~-~~~-~-~~y~~~K~~~E~~l~-------~-~g~~~~ilRp~~~~~~~~~~~~~~~~~~  244 (399)
                      +...   + .++|++||.... ..+ . ..|+.+|...+.+.+       . .|+++..|.||.+...+...+.. .-..
T Consensus       164 ~~p~m~~~-G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-~~~~  241 (303)
T PLN02730        164 FGPIMNPG-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-IDDM  241 (303)
T ss_pred             HHHHHhcC-CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-cHHH
Confidence            6443   2 589999987543 223 2 369999999998752       2 47999999999887554322100 0000


Q ss_pred             cccccCC-CCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          245 KSVWGTD-ALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       245 ~~~~~~~-~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                      ....... +..  .+...+|++.+++.++...  ...|+++.+.++
T Consensus       242 ~~~~~~~~pl~--r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        242 IEYSYANAPLQ--KELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             HHHHHhcCCCC--CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            0000000 111  2467799999999999753  336778887765

>PLN00015 protochlorophyllide reductase

Probab=99.37  E-value=3.1e-12  Score=120.42  Aligned_cols=196  Identities=12%  Similarity=0.140  Sum_probs=124.4

Q ss_pred             EEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           87 LVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        87 lVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      +||||++.||.+++++|+++| ++|++.+|+.++....   +.  ...+.++++|++|.+++.++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 9999999975432211   11  1246778999999988876653       589999


Q ss_pred             ECCCCCCC------------CcchhccHHHHHHHHHH----HHHcC--CcEEEEecccCCCC------------------
Q 015872          154 DCATGRPE------------EPIKKVDWEGKVALIQC----AKAMG--IQKYVFYSIHNCDK------------------  197 (399)
Q Consensus       154 ~~a~~~~~------------~~~~~~n~~~~~~l~~a----a~~~~--v~~~V~~Ss~~~~~------------------  197 (399)
                      |+||....            +..+++|+.++..++++    +++.+  ..++|++||.....                  
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99984211            12346888887666444    44444  36999999975321                  


Q ss_pred             -------------------CCCCcHHHHHHHHHHHH----Hh----CCCCEEEEecCccc-ccccccchhhhcccc-ccc
Q 015872          198 -------------------HPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLCGFM-QGLIGQYAVPILEEK-SVW  248 (399)
Q Consensus       198 -------------------~~~~~y~~~K~~~E~~l----~~----~g~~~~ilRp~~~~-~~~~~~~~~~~~~~~-~~~  248 (399)
                                         .+...|..+|.....+.    ++    .|+.++.+.||.+. .++...... ..... ..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~-~~~~~~~~~  239 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP-LFRLLFPPF  239 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH-HHHHHHHHH
Confidence                               01245999999855442    22    47999999999984 343322110 00000 000


Q ss_pred             cCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          249 GTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       249 ~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      ......  .+...++.|+.++.++.+..  ..|..|...
T Consensus       240 ~~~~~~--~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        240 QKYITK--GYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             HHHHhc--ccccHHHhhhhhhhhccccccCCCccccccC
Confidence            000000  24677999999998887633  245555443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.33  E-value=1.4e-11  Score=111.79  Aligned_cols=181  Identities=16%  Similarity=0.126  Sum_probs=125.0

Q ss_pred             HHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc----CCCEEEECCCCC---CCCcchhccHHH
Q 015872           99 IVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR---PEEPIKKVDWEG  171 (399)
Q Consensus        99 lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~----~~d~Vi~~a~~~---~~~~~~~~n~~~  171 (399)
                      +++.|+++|++|++++|+.++..      ..+++++|++|.+++.++++    ++|+|||+||..   +.+...++|+.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~   74 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG   74 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence            47889999999999999854421      24568999999999888876    589999999943   334446789999


Q ss_pred             HHHHHHHHHHc--CCcEEEEecccCCCC-----------------------------CCCCcHHHHHHHHHHHH------
Q 015872          172 KVALIQCAKAM--GIQKYVFYSIHNCDK-----------------------------HPEVPLMEIKYCTEQFL------  214 (399)
Q Consensus       172 ~~~l~~aa~~~--~v~~~V~~Ss~~~~~-----------------------------~~~~~y~~~K~~~E~~l------  214 (399)
                      +..+++++...  +-.+||++||.....                             ....+|+.+|...+.+.      
T Consensus        75 ~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  154 (241)
T PRK12428         75 LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQP  154 (241)
T ss_pred             HHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            99999998754  225999999986542                             23467999999998654      


Q ss_pred             --HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          215 --QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       215 --~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                        ...|++++.++||.+.+.+...... ............... .+...+|+|++++.++..+  ...|+.+.+.++
T Consensus       155 e~~~~girvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~-~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        155 WFGARGIRVNCVAPGPVFTPILGDFRS-MLGQERVDSDAKRMG-RPATADEQAAVLVFLCSDAARWINGVNLPVDGG  229 (241)
T ss_pred             hhhccCeEEEEeecCCccCcccccchh-hhhhHhhhhcccccC-CCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence              2358999999999998665432111 000000000000011 2567899999999988653  235777777766

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.32  E-value=2e-11  Score=104.72  Aligned_cols=205  Identities=18%  Similarity=0.144  Sum_probs=137.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--cc----ccCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FL----RDWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--~l----~~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ...|.+++||+.|.||..+.++|+++|..+.++.-+.+.+..  .|    ....+.++++|+++..+++++++       
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            346899999999999999999999999888888766554321  12    22358899999999988888875       


Q ss_pred             CCCEEEECCCCCCC---CcchhccHHHHHH----HHHHHHHcC---CcEEEEecccCC-CCCCC-CcHHHHHHHH-----
Q 015872          148 GVHTVIDCATGRPE---EPIKKVDWEGKVA----LIQCAKAMG---IQKYVFYSIHNC-DKHPE-VPLMEIKYCT-----  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~---~~~~~~n~~~~~~----l~~aa~~~~---v~~~V~~Ss~~~-~~~~~-~~y~~~K~~~-----  210 (399)
                      .+|++||.||..++   +....+|+.|..+    .+++..+.+   -.-+|.+||... ++-|. ..|+++|+.+     
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR  162 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR  162 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence            47999999995444   4444577766544    566654432   236899998754 33333 3488888665     


Q ss_pred             ----HHHHHhCCCCEEEEecCcccccccccchhh--hcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEE
Q 015872          211 ----EQFLQDSGLPHVIIRLCGFMQGLIGQYAVP--ILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLT  283 (399)
Q Consensus       211 ----E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~  283 (399)
                          +.+++++|+++..++||.+-......+-..  .++-. .+..  .-.+.+--+..+++..++.++|.+. +|.+|-
T Consensus       163 Sla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~--~l~~~~~q~~~~~a~~~v~aiE~~~-NGaiw~  239 (261)
T KOG4169|consen  163 SLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKE--ALERAPKQSPACCAINIVNAIEYPK-NGAIWK  239 (261)
T ss_pred             hhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHH--HHHHcccCCHHHHHHHHHHHHhhcc-CCcEEE
Confidence                456788999999999987654333322110  00000 0000  0001123345899999999999865 678888


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +..+.
T Consensus       240 v~~g~  244 (261)
T KOG4169|consen  240 VDSGS  244 (261)
T ss_pred             EecCc
Confidence            88764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.31  E-value=4.9e-12  Score=107.10  Aligned_cols=153  Identities=17%  Similarity=0.177  Sum_probs=116.9

Q ss_pred             CCeEEEEcC-CChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--------CCCEEE
Q 015872           83 PTSILVVGA-TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--------GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGa-tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--------~~d~Vi  153 (399)
                      .++|||||+ +|.||.+|++++.++|+.|.+..|..+.-.+.-...++.+.+.|+++++++.....        ..|.++
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            578999965 69999999999999999999999987665554446789999999999998876653        469999


Q ss_pred             ECCCCC---C--------CCcchhccHHHHHHHHHHHHHcC---CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 015872          154 DCATGR---P--------EEPIKKVDWEGKVALIQCAKAMG---IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       154 ~~a~~~---~--------~~~~~~~n~~~~~~l~~aa~~~~---v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~-  216 (399)
                      |+||..   |        -+..+++|+.|..++.++....=   -..||++.|....  ..-...|.++|++.-.|-+. 
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tL  166 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTL  166 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhc
Confidence            999921   1        13345689888877777765331   1379999998754  33456799999999888643 


Q ss_pred             ------CCCCEEEEecCcccccccc
Q 015872          217 ------SGLPHVIIRLCGFMQGLIG  235 (399)
Q Consensus       217 ------~g~~~~ilRp~~~~~~~~~  235 (399)
                            .|++++-+-+|++-.++-+
T Consensus       167 rlEl~PFgv~Vin~itGGv~T~Ia~  191 (289)
T KOG1209|consen  167 RLELKPFGVRVINAITGGVATDIAD  191 (289)
T ss_pred             EEeeeccccEEEEecccceeccccc
Confidence                  6788888888887755433

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.31  E-value=5.3e-11  Score=109.15  Aligned_cols=208  Identities=14%  Similarity=0.065  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--------cCCcEEEEccCCCCCcHHHHh-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--------DWGATVVNADLSKPETIPATL-----  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--------~~~v~~~~~Dl~d~~~l~~~~-----  146 (399)
                      ....|.++||||+..||++++.+|++.|.+|++..|+.+.......        ...+..+.+|+++.++..+++     
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999998654222111        124788999999876654443     


Q ss_pred             ---cCCCEEEECCCCCCC------------CcchhccHHH-HHHHHHHHH----HcCCcEEEEecccCCCCC--CC-CcH
Q 015872          147 ---VGVHTVIDCATGRPE------------EPIKKVDWEG-KVALIQCAK----AMGIQKYVFYSIHNCDKH--PE-VPL  203 (399)
Q Consensus       147 ---~~~d~Vi~~a~~~~~------------~~~~~~n~~~-~~~l~~aa~----~~~v~~~V~~Ss~~~~~~--~~-~~y  203 (399)
                         .++|++|++||....            +...++|+.| ...+..++.    +.+-..++++||.+....  +. ..|
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y  164 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY  164 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence               359999999993221            2233578885 444444443    334457999998865422  22 689


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchh-----hhccccccccCCCCcceeceeHHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-----PILEEKSVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      +.+|..++++.+       ..|+++..+-||.+...+......     ...+. ......-... .+...+|++..+..+
T Consensus       165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~p~g-r~g~~~eva~~~~fl  242 (270)
T KOG0725|consen  165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA-TDSKGAVPLG-RVGTPEEVAEAAAFL  242 (270)
T ss_pred             hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh-hccccccccC-CccCHHHHHHhHHhh
Confidence            999999999864       478999999999887665110000     00000 0000000111 356679999999988


Q ss_pred             HhCCc--cCCcEEEEcCCCC
Q 015872          272 LRNEK--INGRTLTFSGPRA  289 (399)
Q Consensus       272 l~~~~--~~g~~~~l~~~~~  289 (399)
                      +..+.  ..|+.+.+.++..
T Consensus       243 a~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  243 ASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             cCcccccccCCEEEEeCCEE
Confidence            87642  3577777777643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.30  E-value=8e-12  Score=113.39  Aligned_cols=194  Identities=18%  Similarity=0.216  Sum_probs=133.5

Q ss_pred             cCC--ChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccccCCcEEEEccCCCCCcHHHHh--------cCCCEEEEC
Q 015872           90 GAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLRDWGATVVNADLSKPETIPATL--------VGVHTVIDC  155 (399)
Q Consensus        90 Gat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~~~~v~~~~~Dl~d~~~l~~~~--------~~~d~Vi~~  155 (399)
                      |++  +.||..+++.|+++|++|++.+|+.++.    .......+.+++++|++|++++.+++        ..+|++||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999986642    22223346778999999998877663        468999999


Q ss_pred             CCCCCC----Ccch-----------hccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          156 ATGRPE----EPIK-----------KVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       156 a~~~~~----~~~~-----------~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      ++..+.    ..+.           ++|+.+...+++++...  .-..+|++||....  ......|+.+|...+.+.+ 
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            984332    2222           35666676666666442  11479999987542  3334579999999998763 


Q ss_pred             ------h-CCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEE
Q 015872          216 ------D-SGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTF  284 (399)
Q Consensus       216 ------~-~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l  284 (399)
                            . .|+++..|.||.+.........  ....+..   ......+ .+...+|+|.+++.++.+.  ...|+++.+
T Consensus       161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~---~~~~pl~-r~~~~~evA~~v~fL~s~~a~~itG~~i~v  236 (241)
T PF13561_consen  161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEEL---KKRIPLG-RLGTPEEVANAVLFLASDAASYITGQVIPV  236 (241)
T ss_dssp             HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHH---HHHSTTS-SHBEHHHHHHHHHHHHSGGGTTGTSEEEEE
T ss_pred             HHHHhccccCeeeeeecccceeccchhccccccchhhhh---hhhhccC-CCcCHHHHHHHHHHHhCccccCccCCeEEE
Confidence                  3 6899999999988855432211  1111100   0000111 3568899999999999875  347899999


Q ss_pred             cCC
Q 015872          285 SGP  287 (399)
Q Consensus       285 ~~~  287 (399)
                      .||
T Consensus       237 DGG  239 (241)
T PF13561_consen  237 DGG  239 (241)
T ss_dssp             STT
T ss_pred             CCC
Confidence            886

...

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.30  E-value=4.2e-11  Score=100.14  Aligned_cols=202  Identities=16%  Similarity=0.170  Sum_probs=136.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC-CcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW-GATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~-~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +.+..+||||+..||++++..|.+.|++|.+.+++.....   ..|... +-..+.+|+.+++++...++       .++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            4577999999999999999999999999999999865432   223332 35679999999887766543       589


Q ss_pred             EEEECCCCC-----------CCCcchhccHHHHHHHHHHHHHc----CCc--EEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          151 TVIDCATGR-----------PEEPIKKVDWEGKVALIQCAKAM----GIQ--KYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       151 ~Vi~~a~~~-----------~~~~~~~~n~~~~~~l~~aa~~~----~v~--~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      ++++|||..           .++....+|+.|+-.+.+++.+.    +..  .||.+||.-.  ......-|..+|.-+-
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI  172 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI  172 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence            999999932           23344568999888777777654    222  8999999742  3445566777664432


Q ss_pred             -------HHHHhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 -------QFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 -------~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                             +-+...++++..+.||.+-.+........++...  .+.-+..  .+-..+|+|..+..+..+..  ..|..+
T Consensus       173 gftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki--~~~iPmg--r~G~~EevA~~V~fLAS~~ssYiTG~t~  248 (256)
T KOG1200|consen  173 GFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKI--LGMIPMG--RLGEAEEVANLVLFLASDASSYITGTTL  248 (256)
T ss_pred             eeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHH--HccCCcc--ccCCHHHHHHHHHHHhccccccccceeE
Confidence                   2234468999999998877554433322222211  1111122  35566999999988875432  247788


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.|+
T Consensus       249 evtGG  253 (256)
T KOG1200|consen  249 EVTGG  253 (256)
T ss_pred             EEecc
Confidence            88876

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.28  E-value=8.8e-12  Score=106.26  Aligned_cols=133  Identities=21%  Similarity=0.195  Sum_probs=99.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecC--CCCCc---ccccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRP--RPAPA---DFLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~--~~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      |+|+||||+|.||..++++|+++ ++.|.++.|+  .+...   ..++.  .++.++++|+++++++.++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57999999999999999999999 4678888887  12111   11222  357899999999988877764       5


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      +|++||++|.....           ..+++|+.+...+.+++...+-.++|++||.....  .....|..+|...+.+.+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHH
Confidence            89999999943322           22357888888888888775566999999876543  233579999999998875


Q ss_pred             h
Q 015872          216 D  216 (399)
Q Consensus       216 ~  216 (399)
                      .
T Consensus       161 ~  161 (167)
T PF00106_consen  161 S  161 (167)
T ss_dssp             H
T ss_pred             H
Confidence            3

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.27  E-value=1.5e-10  Score=99.34  Aligned_cols=187  Identities=17%  Similarity=0.196  Sum_probs=128.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecC-CCCCccccc-----cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRP-RPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~-~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      |.++.|+||||+-.||..||++|++. |.++++..+. ++++...+.     ..++++++.|+++.+++.++.+      
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            44677999999999999999999976 7777666655 444333332     3479999999999888776653      


Q ss_pred             ---CCCEEEECCCCC--------CC----CcchhccHHHHHHH----HHHHHHcCCc-----------EEEEecccCC--
Q 015872          148 ---GVHTVIDCATGR--------PE----EPIKKVDWEGKVAL----IQCAKAMGIQ-----------KYVFYSIHNC--  195 (399)
Q Consensus       148 ---~~d~Vi~~a~~~--------~~----~~~~~~n~~~~~~l----~~aa~~~~v~-----------~~V~~Ss~~~--  195 (399)
                         |.|.+|++||..        +.    ...+++|..+...+    +-..+++..+           .+|++||...  
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence               679999999921        11    12235776665443    3333443333           6888887643  


Q ss_pred             ---CCCCCCcHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHH
Q 015872          196 ---DKHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIA  265 (399)
Q Consensus       196 ---~~~~~~~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  265 (399)
                         ...+...|..+|.+.-.+.++       .++-++.+.||||-.+.-.                   .-..+.+++-+
T Consensus       161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-------------------~~a~ltveeSt  221 (249)
T KOG1611|consen  161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-------------------KKAALTVEEST  221 (249)
T ss_pred             CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------CCcccchhhhH
Confidence               344567899999999877654       4566888999998754322                   11456677778


Q ss_pred             HHHHHHHhC--CccCCcEEEEcC
Q 015872          266 RLTFVALRN--EKINGRTLTFSG  286 (399)
Q Consensus       266 ~~i~~~l~~--~~~~g~~~~l~~  286 (399)
                      .-++..+.+  +.++|..||-.+
T Consensus       222 s~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  222 SKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHHHHhcCcccCcceEccCC
Confidence            888887765  556777877644

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.27  E-value=3.6e-11  Score=108.49  Aligned_cols=153  Identities=18%  Similarity=0.222  Sum_probs=115.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc---------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV---------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~---------  147 (399)
                      ...|-|||||+....|..++++|.++|+.|.+-.-. ++..+.+.    +.+...++.|+++++++.++.+         
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~-~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLT-EEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeec-CchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            345679999999999999999999999999999965 33333332    3467888999999999988864         


Q ss_pred             CCCEEEECCCC---CCC---------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATG---RPE---------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~---~~~---------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      +-..|||+||.   ..+         ....++|+.|+..+..    ..+++. .|+|++||...-  .+...+|..||..
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFA  184 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHH
Confidence            46799999981   111         1223688887766544    445554 499999998753  3345789999999


Q ss_pred             HHHHH-------HhCCCCEEEEecCcccccccc
Q 015872          210 TEQFL-------QDSGLPHVIIRLCGFMQGLIG  235 (399)
Q Consensus       210 ~E~~l-------~~~g~~~~ilRp~~~~~~~~~  235 (399)
                      +|.+.       +..|+++.++-||.+-.++.+
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99874       458999999999966655544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.22  E-value=4.3e-11  Score=101.09  Aligned_cols=152  Identities=13%  Similarity=0.076  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +...+||||||+..||..+++++++.|-+|++..|+.....+... .+++..+.+|+.|.+++++..+       ..+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            345789999999999999999999999999999998544333222 2367889999999987776654       47999


Q ss_pred             EECCCCCC-------C------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          153 IDCATGRP-------E------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       153 i~~a~~~~-------~------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      |+|||...       +      ++...+|+.++..|..+...+    .-.-+|.+||.-.  +....-.|..+|+..--|
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsy  162 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSY  162 (245)
T ss_pred             eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHH
Confidence            99999221       1      122347888887776666544    2336999998643  333334699999888654


Q ss_pred             -------HHhCCCCEEEEecCccccc
Q 015872          214 -------LQDSGLPHVIIRLCGFMQG  232 (399)
Q Consensus       214 -------l~~~g~~~~ilRp~~~~~~  232 (399)
                             ++..+++++-+-|+.|-..
T Consensus       163 t~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         163 TLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHhhhcceEEEEecCCceecC
Confidence                   3556788888888777643

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.21  E-value=6.7e-11  Score=101.14  Aligned_cols=218  Identities=12%  Similarity=0.074  Sum_probs=136.7

Q ss_pred             CeEEEEcCCChhHHHHHH-----HHHHCC----CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVR-----RALDEG----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~-----~L~~~g----~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      .+.++-+++|+|+..|..     ++-+.+    |+|++++|.+.+..       +++-+.|..   .+.   -.|+++++
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-------itw~el~~~---Gip---~sc~a~vn   79 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-------ITWPELDFP---GIP---ISCVAGVN   79 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-------cccchhcCC---CCc---eehHHHHh
Confidence            456677899999988877     555545    99999999865532       222222211   111   13444455


Q ss_pred             CCC------CCCCCcchhcc-----HHHHHHHHHHHHHcC--CcEEEEecccCCCCCCCC-cHH----------HHH--H
Q 015872          155 CAT------GRPEEPIKKVD-----WEGKVALIQCAKAMG--IQKYVFYSIHNCDKHPEV-PLM----------EIK--Y  208 (399)
Q Consensus       155 ~a~------~~~~~~~~~~n-----~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~~~~-~y~----------~~K--~  208 (399)
                      .+|      ...+..-++.+     +..+..|+++...+.  .+.+|.+|..+.+....+ .|.          .+.  .
T Consensus        80 a~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l  159 (315)
T KOG3019|consen   80 AVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCL  159 (315)
T ss_pred             hhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHH
Confidence            444      11222222222     345677889888775  347888887665543221 121          122  1


Q ss_pred             HHHHHH--HhCCCCEEEEecCcccccc---cccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          209 CTEQFL--QDSGLPHVIIRLCGFMQGL---IGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       209 ~~E~~l--~~~g~~~~ilRp~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +=|...  .....+.+++|.|.+.|..   +...+.  ++..|++  .+.+++.++|||++|++..|..+++++... .+
T Consensus       160 ~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGP--lGsG~Q~fpWIHv~DL~~li~~ale~~~v~-GV  236 (315)
T KOG3019|consen  160 EWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGP--LGSGQQWFPWIHVDDLVNLIYEALENPSVK-GV  236 (315)
T ss_pred             HHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCc--CCCCCeeeeeeehHHHHHHHHHHHhcCCCC-ce
Confidence            223332  2245889999999988532   222222  2222222  123577789999999999999999997654 48


Q ss_pred             EEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHH
Q 015872          282 LTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLR  318 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~  318 (399)
                      .|-..|+..+..|+++.+.++++++ -+.++|.....
T Consensus       237 iNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvvq  272 (315)
T KOG3019|consen  237 INGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVVQ  272 (315)
T ss_pred             ecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHHH
Confidence            8988899999999999999999987 56677776654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.21  E-value=3.4e-10  Score=103.24  Aligned_cols=150  Identities=21%  Similarity=0.183  Sum_probs=106.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccc---cc----CCcEEEEccCCC-CCcHHHHhc----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFL---RD----WGATVVNADLSK-PETIPATLV----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l---~~----~~v~~~~~Dl~d-~~~l~~~~~----  147 (399)
                      +++++|+||||++.||..+++.|+++|+.|+++.|..... .+.+   ..    ..+....+|+++ .+++..+++    
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999998875541 1111   11    246677799998 776655543    


Q ss_pred             ---CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCCCC--CCcHHHHHHH
Q 015872          148 ---GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKHP--EVPLMEIKYC  209 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~~--~~~y~~~K~~  209 (399)
                         ++|++||+||....            +...++|+.+...+.+++...- -+++|++||......+  ...|+.+|..
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~~~~~Y~~sK~a  162 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAA  162 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCCCcchHHHHHHH
Confidence               48999999995322            1123578877777666433221 1189999998765222  2689999999


Q ss_pred             HHHHH-------HhCCCCEEEEecCccc
Q 015872          210 TEQFL-------QDSGLPHVIIRLCGFM  230 (399)
Q Consensus       210 ~E~~l-------~~~g~~~~ilRp~~~~  230 (399)
                      .+.+.       ...|+.+..+.||.+.
T Consensus       163 l~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         163 LIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            98764       2368999999998554

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=2.7e-11  Score=99.35  Aligned_cols=205  Identities=16%  Similarity=0.168  Sum_probs=140.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhcC---CCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLVG---VHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~~---~d~Vi~  154 (399)
                      ....+.|+|||+.-.||+.++..|.+.|.+|+++.|++.......+.-  -++.+.+|+.+.+.+.+.+..   +|.+++
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            345678999999999999999999999999999999866544433322  388999999997777777763   699999


Q ss_pred             CCCCCC-----------CCcchhccHHHHHHHHHHHH----HcCC-cEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          155 CATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       155 ~a~~~~-----------~~~~~~~n~~~~~~l~~aa~----~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      +||...           .+..+++|+.+..++.+...    ..++ .-+|.+||....  -...+.|..+|.+.+.+-+ 
T Consensus        84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~  163 (245)
T KOG1207|consen   84 NAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKC  163 (245)
T ss_pred             cchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHH
Confidence            998322           22334578877766655532    2233 269999997653  3456789999999986542 


Q ss_pred             ---h---CCCCEEEEecCccccccc-ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 ---D---SGLPHVIIRLCGFMQGLI-GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 ---~---~g~~~~ilRp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                         +   ..+++..+.|..++...- .+|..+...+. +..--+-.  -|..++.++.++..++.+..  ..|..+-+.|
T Consensus       164 lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~-mL~riPl~--rFaEV~eVVnA~lfLLSd~ssmttGstlpveG  240 (245)
T KOG1207|consen  164 LALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKK-MLDRIPLK--RFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEG  240 (245)
T ss_pred             HHHhhCcceeEeeccCCeEEEecccccccCCchhccc-hhhhCchh--hhhHHHHHHhhheeeeecCcCcccCceeeecC
Confidence               3   347788888988774332 23333333222 11100111  47888999999999887643  3566666666


Q ss_pred             C
Q 015872          287 P  287 (399)
Q Consensus       287 ~  287 (399)
                      |
T Consensus       241 G  241 (245)
T KOG1207|consen  241 G  241 (245)
T ss_pred             C
Confidence            5

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.16  E-value=1.1e-09  Score=102.26  Aligned_cols=204  Identities=12%  Similarity=0.064  Sum_probs=124.2

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCC--------CCCccc---c-ccCC-------cEEEEccCCC
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPR--------PAPADF---L-RDWG-------ATVVNADLSK  138 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~--------~~~~~~---l-~~~~-------v~~~~~Dl~d  138 (399)
                      .++.|.++||||+  ..||+++++.|+++|++|.+.+|.+        ....+.   . ...+       +..+.+|+.+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            4567899999995  8999999999999999999976531        000000   0 0000       1112344444


Q ss_pred             CC------------------cHHHHh-------cCCCEEEECCCCCC--C-----------CcchhccHHHHHHHHHHHH
Q 015872          139 PE------------------TIPATL-------VGVHTVIDCATGRP--E-----------EPIKKVDWEGKVALIQCAK  180 (399)
Q Consensus       139 ~~------------------~l~~~~-------~~~d~Vi~~a~~~~--~-----------~~~~~~n~~~~~~l~~aa~  180 (399)
                      .+                  ++.+++       ..+|++||+||...  .           ....++|+.+..++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            43                  233333       35899999997321  1           1123578888888777775


Q ss_pred             Hc--CCcEEEEecccCCC-CCCC-C-cHHHHHHHHHHHHH-------h-CCCCEEEEecCcccccccccch--hhhcccc
Q 015872          181 AM--GIQKYVFYSIHNCD-KHPE-V-PLMEIKYCTEQFLQ-------D-SGLPHVIIRLCGFMQGLIGQYA--VPILEEK  245 (399)
Q Consensus       181 ~~--~v~~~V~~Ss~~~~-~~~~-~-~y~~~K~~~E~~l~-------~-~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~  245 (399)
                      ..  .-.++|++||.... ..+. . .|+.+|...+.+.+       . .|+++..|.||.+.........  ...... 
T Consensus       165 p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~-  243 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDY-  243 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHH-
Confidence            43  11378888876542 2333 2 69999999987652       2 3899999999988754322110  000000 


Q ss_pred             ccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          246 SVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       246 ~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                       .....+..  .+...+|++++++.++..+  ...|+++.+.++
T Consensus       244 -~~~~~p~~--r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        244 -YQDWAPLP--EPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             -HHhcCCCC--CCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence             00000111  3457799999999988753  346788888775

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.16  E-value=1.4e-10  Score=100.29  Aligned_cols=145  Identities=20%  Similarity=0.309  Sum_probs=101.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCC-CC--c---cccccC--CcEEEEccCCCCCcHHHHhc-------C
Q 015872           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRP-AP--A---DFLRDW--GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~-~~--~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++||||+|.||..+++.|+++| .+|+++.|+.. ..  .   ..+...  .+.++.+|++|++++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            48999999999999999999997 57899999721 11  1   122222  47888999999999988875       3


Q ss_pred             CCEEEECCCCCCCCcch-----------hccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH-
Q 015872          149 VHTVIDCATGRPEEPIK-----------KVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL-  214 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~~~~-----------~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l-  214 (399)
                      ++.|||+++......+.           ..-+.++.+|.++.....++.||.+||...  .......|.......+.+. 
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~  161 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALAR  161 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHH
Confidence            58999999943322222           234778889999998888999999998753  3445678999998888776 


Q ss_pred             --HhCCCCEEEEecCcc
Q 015872          215 --QDSGLPHVIIRLCGF  229 (399)
Q Consensus       215 --~~~g~~~~ilRp~~~  229 (399)
                        +..|.+++.|..+.+
T Consensus       162 ~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  162 QRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHTTSEEEEEEE-EB
T ss_pred             HHHhCCCCEEEEEcccc
Confidence              457888888877644

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.15  E-value=4e-10  Score=104.98  Aligned_cols=157  Identities=15%  Similarity=0.090  Sum_probs=112.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cc----ccCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FL----RDWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l----~~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+..+.++|||||..||..+++.|+.+|.+|+...|+.....+   .+    ....+.++++|+.|.+++.++.+     
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            4445789999999999999999999999999999998533221   11    12357789999999988876653     


Q ss_pred             --CCCEEEECCCCC---------CCCcchhccHHHHHH----HHHHHHHcCCcEEEEecccCC-C--------------C
Q 015872          148 --GVHTVIDCATGR---------PEEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC-D--------------K  197 (399)
Q Consensus       148 --~~d~Vi~~a~~~---------~~~~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~-~--------------~  197 (399)
                        ..|+.|++||..         ..+....+|+.|...    |++.++.....|+|++||... .              .
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~  191 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY  191 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence              579999999921         123445688877654    556666665569999999653 0              1


Q ss_pred             CCCCcHHHHHHHHHHHHH----h--CCCCEEEEecCccccccccc
Q 015872          198 HPEVPLMEIKYCTEQFLQ----D--SGLPHVIIRLCGFMQGLIGQ  236 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~----~--~g~~~~ilRp~~~~~~~~~~  236 (399)
                      .....|..||.+...+..    +  .|+.+..+.||.+..+.+.+
T Consensus       192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence            111238999988865542    2  27999999999888764433

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.05  E-value=3.6e-10  Score=96.92  Aligned_cols=151  Identities=14%  Similarity=0.199  Sum_probs=102.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      |+++||||||++|. +++.|+++|++|++++|+.+.......    ...+..+.+|+.|++++.++++       .+|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            57999999998876 999999999999999997543222111    1257788999999998887775       35677


Q ss_pred             EECCCCCCCCcchhccHHHHHHHHHHHHHcCCc----EEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCc
Q 015872          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ----KYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCG  228 (399)
Q Consensus       153 i~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~----~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~  228 (399)
                      |+.           +++.++.++..+|++.|++    +|+++=...+.+ +       +...+.. ......|.=+..|.
T Consensus        80 v~~-----------vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~-~-------~~~~~~~-~~~~~~~~~i~lgf  139 (177)
T PRK08309         80 VAW-----------IHSSAKDALSVVCRELDGSSETYRLFHVLGSAASD-P-------RIPSEKI-GPARCSYRRVILGF  139 (177)
T ss_pred             EEe-----------ccccchhhHHHHHHHHccCCCCceEEEEeCCcCCc-h-------hhhhhhh-hhcCCceEEEEEeE
Confidence            765           4456788999999999998    788665333221 1       1111222 22344555444443


Q ss_pred             ccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          229 FMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.++                   ...  -|+.-+.+++.++.+++.+.
T Consensus       140 ~~~~-------------------~~~--rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        140 VLED-------------------TYS--RWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             EEeC-------------------Ccc--ccCchHHHHHHHHHHHhcCC
Confidence            3322                   122  37777899999999998754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.02  E-value=5.1e-09  Score=94.54  Aligned_cols=187  Identities=12%  Similarity=0.141  Sum_probs=127.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-------CcEEEEccCCCCCcHHHHhc-------CC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-------GATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-------~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .+|+||||+..+|..++..+..+|++|+++.|+..+..+..+..       .+.+.-+|+.|.+++..+++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            58999999999999999999999999999999865533322221       25678899999888877765       36


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      |.+|||||..-+           +...++|+.|+.|++.++...-     ..+|+.+||..+  .-...+.|..+|.+..
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr  193 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR  193 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence            999999993221           2234689999999888775431     238898888654  2334567888887776


Q ss_pred             HHH-------HhCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          212 QFL-------QDSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       212 ~~l-------~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .+.       .+.++.++...|+.+-.+.+..-  +..+.. .....++.   +.+..+++|.+++.-+...
T Consensus       194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E--n~tkP~~t~ii~g~s---s~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  194 GLAEALRQELIKYGVHVTLYYPPDTLTPGFERE--NKTKPEETKIIEGGS---SVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             HHHHHHHHHHhhcceEEEEEcCCCCCCCccccc--cccCchheeeecCCC---CCcCHHHHHHHHHhHHhhc
Confidence            443       34689999999988764432210  000000 11111111   3467799999998877764

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.99  E-value=3.3e-09  Score=99.17  Aligned_cols=115  Identities=13%  Similarity=0.081  Sum_probs=86.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+++||+|+|++|.+|+.++..|+.++  +++.+++++..+. ...+.+........+.+|+.++.++++++|+||+++|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            345799999999999999999999665  7899999942221 1122222223445667776777789999999999999


Q ss_pred             CCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      ...     ..+....|+..++++++++++++++++|+++|-.+
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv  128 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV  128 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            422     23456789999999999999999999999998643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.95  E-value=2.9e-09  Score=122.20  Aligned_cols=151  Identities=11%  Similarity=0.049  Sum_probs=113.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCC-----------------------------------------
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAP-----------------------------------------  120 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~-----------------------------------------  120 (399)
                      .+.|+||||+|.||..++++|+++ |.+|+++.|+....                                         
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            578999999999999999999998 69999999972100                                         


Q ss_pred             ---------ccccccC--CcEEEEccCCCCCcHHHHhc------CCCEEEECCCCCC-----------CCcchhccHHHH
Q 015872          121 ---------ADFLRDW--GATVVNADLSKPETIPATLV------GVHTVIDCATGRP-----------EEPIKKVDWEGK  172 (399)
Q Consensus       121 ---------~~~l~~~--~v~~~~~Dl~d~~~l~~~~~------~~d~Vi~~a~~~~-----------~~~~~~~n~~~~  172 (399)
                               ...+...  .+.++.+|++|.+++.+++.      ++|.|||+||...           ....+++|+.|+
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence                     0001111  36788999999988877764      4899999999321           122356899999


Q ss_pred             HHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH----h-CCCCEEEEecCcccccc
Q 015872          173 VALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ----D-SGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       173 ~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~----~-~g~~~~ilRp~~~~~~~  233 (399)
                      .++++++.....++||++||....  ......|..+|...+.+.+    + .++++..+.||.+-++.
T Consensus      2157 ~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2157 LSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence            999999988777899999997642  3345679999988876552    2 35788999998776544

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.86  E-value=6.7e-09  Score=98.44  Aligned_cols=96  Identities=21%  Similarity=0.281  Sum_probs=79.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ||+|+|+|+ |++|+.++..|+++| ++|++.+|+.++..+....  .+++.++.|+.|.+.+.+++++.|+||+++...
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            478999999 999999999999999 9999999986665443222  379999999999999999999999999999732


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                                 -..+++++|.++|+ ++|=+|
T Consensus        80 -----------~~~~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          80 -----------VDLTILKACIKTGV-DYVDTS   99 (389)
T ss_pred             -----------hhHHHHHHHHHhCC-CEEEcc
Confidence                       13478888888887 566555

>PLN00106 malate dehydrogenase

Probab=98.83  E-value=2.6e-08  Score=93.31  Aligned_cols=111  Identities=12%  Similarity=0.036  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +.||+|+|++|.+|..++..|+.+|  .++.+++++.... ...+.+........++.+.+++.++++++|+|||+||..
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            3589999999999999999999776  4899999875211 112222122223345555666889999999999999932


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                           ...+....|...++++++.+++++.+.+|+++|-
T Consensus        98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN  136 (323)
T PLN00106         98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN  136 (323)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence                 2234456899999999999999999988888874

>PRK06720 hypothetical protein; Provisional

Probab=98.82  E-value=1.9e-08  Score=85.79  Aligned_cols=78  Identities=14%  Similarity=0.125  Sum_probs=61.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---ccccc--CCcEEEEccCCCCCcHHHHh-------c
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD--WGATVVNADLSKPETIPATL-------V  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~-------~  147 (399)
                      .++.+.++||||+|.||..+++.|++.|++|.+++|+.+...   ..+..  ....++.+|++|.+++.+++       .
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            355689999999999999999999999999999998754321   11211  23567899999988776654       3


Q ss_pred             CCCEEEECCC
Q 015872          148 GVHTVIDCAT  157 (399)
Q Consensus       148 ~~d~Vi~~a~  157 (399)
                      ++|++||+||
T Consensus        93 ~iDilVnnAG  102 (169)
T PRK06720         93 RIDMLFQNAG  102 (169)
T ss_pred             CCCEEEECCC
Confidence            6899999998

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.80  E-value=6.9e-09  Score=85.21  Aligned_cols=198  Identities=18%  Similarity=0.248  Sum_probs=136.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhc-------CCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~  154 (399)
                      -..+||||...+|...++.|.++|..|.+++-..++..+..++.  ++.+...|++.++++..++.       ..|+.++
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vn   89 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVN   89 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeee
Confidence            34789999999999999999999999999998766655444444  46788899999999988875       4799999


Q ss_pred             CCCCC--------------C---CCcchhccHHHHHHHHHHHHHc--------CCcEEEEec--ccCC--CCCCCCcHHH
Q 015872          155 CATGR--------------P---EEPIKKVDWEGKVALIQCAKAM--------GIQKYVFYS--IHNC--DKHPEVPLME  205 (399)
Q Consensus       155 ~a~~~--------------~---~~~~~~~n~~~~~~l~~aa~~~--------~v~~~V~~S--s~~~--~~~~~~~y~~  205 (399)
                      |||..              .   .....++|+.||-|+++.....        +-+|=|.+-  |...  .......|..
T Consensus        90 cagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysa  169 (260)
T KOG1199|consen   90 CAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSA  169 (260)
T ss_pred             ccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhc
Confidence            99911              1   1223368999998888755321        123444444  4333  2345677999


Q ss_pred             HHHHHHHH-------HHhCCCCEEEEecCcccccccccchhhhc---cccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          206 IKYCTEQF-------LQDSGLPHVIIRLCGFMQGLIGQYAVPIL---EEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       206 ~K~~~E~~-------l~~~g~~~~ilRp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +|...-.+       +...|+++..+-||.|-.+++..+.....   .....+    ..  ..-|....+..+..+++++
T Consensus       170 skgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipf----ps--rlg~p~eyahlvqaiienp  243 (260)
T KOG1199|consen  170 SKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPF----PS--RLGHPHEYAHLVQAIIENP  243 (260)
T ss_pred             ccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCC----ch--hcCChHHHHHHHHHHHhCc
Confidence            99876543       23368999999998776665554332221   111011    11  2446678889999999999


Q ss_pred             ccCCcEEEEcCC
Q 015872          276 KINGRTLTFSGP  287 (399)
Q Consensus       276 ~~~g~~~~l~~~  287 (399)
                      -.+|+++.+.|.
T Consensus       244 ~lngevir~dga  255 (260)
T KOG1199|consen  244 YLNGEVIRFDGA  255 (260)
T ss_pred             ccCCeEEEecce
Confidence            888998888763

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.75  E-value=5.7e-08  Score=91.56  Aligned_cols=108  Identities=11%  Similarity=0.052  Sum_probs=75.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-------CcEEEEecCCCCC-ccccccCCcE----EEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAP-ADFLRDWGAT----VVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-------~~V~~~~r~~~~~-~~~l~~~~v~----~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +.+|+||||+|++|++++..|+..+       .+|++++++.... .+.. ...+.    ...+|+....++.+.++++|
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~-~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGV-VMELQDCAFPLLKSVVATTDPEEAFKDVD   80 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccce-eeehhhccccccCCceecCCHHHHhCCCC
Confidence            3579999999999999999999854       5899999964321 1110 00111    22345555677888999999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC-Cc-EEEEec
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~S  191 (399)
                      +|||+||..     ...+..+.|+...+.+....+++. .+ .+|.+|
T Consensus        81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            999999932     224556789998899988888884 23 455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.63  E-value=1.4e-07  Score=85.50  Aligned_cols=148  Identities=14%  Similarity=0.120  Sum_probs=101.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc-C--CcEEEEccCCCCCc----HHHHhcC--CCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD-W--GATVVNADLSKPET----IPATLVG--VHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~-~--~v~~~~~Dl~d~~~----l~~~~~~--~d~  151 (399)
                      .-..|||||..||.+.+++|+++|++|.++.|+.++...   ++.+ .  .+..+..|.++.+.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            568999999999999999999999999999998765322   1211 2  36778899998765    4444554  568


Q ss_pred             EEECCCCCC--C-----------CcchhccHHHHHHH----HHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          152 VIDCATGRP--E-----------EPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       152 Vi~~a~~~~--~-----------~~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||+|...  +           .....+|+.++..+    +--+.+.+-.-+|++||.+.-.  +..+.|..+|..++.
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~  209 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDF  209 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHH
Confidence            999999222  2           22234676665443    3334444445799999876532  234569999997764


Q ss_pred             HH-------HhCCCCEEEEecCcccc
Q 015872          213 FL-------QDSGLPHVIIRLCGFMQ  231 (399)
Q Consensus       213 ~l-------~~~g~~~~ilRp~~~~~  231 (399)
                      +-       +..|+.+-.+-|..+-.
T Consensus       210 ~S~~L~~Ey~~~gI~Vq~v~p~~VaT  235 (312)
T KOG1014|consen  210 FSRCLQKEYESKGIFVQSVIPYLVAT  235 (312)
T ss_pred             HHHHHHHHHHhcCeEEEEeehhheec
Confidence            32       34688888888866653

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.60  E-value=3e-07  Score=83.31  Aligned_cols=96  Identities=17%  Similarity=0.251  Sum_probs=74.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~~  161 (399)
                      |+|||+||||. |+.|++.|.+.||+|++.+++... ...+...+...+..+..|.+++.+.++  ++|+|||++.+.  
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~-~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf--   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG-KHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPF--   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc-cccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH--
Confidence            57999999999 999999999999999999998543 333444445556666777777888886  599999998621  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                            ....+.++.++|++.|+..+=|
T Consensus        77 ------A~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        77 ------AAQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             ------HHHHHHHHHHHHHHhCCcEEEE
Confidence                  1256889999999999864433

This enzyme was found to be a monomer by gel filtration.

>PRK09620 hypothetical protein; Provisional

Probab=98.57  E-value=1.3e-07  Score=84.51  Aligned_cols=77  Identities=18%  Similarity=0.271  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCC----------------ChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHH
Q 015872           82 RPTSILVVGAT----------------GTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPA  144 (399)
Q Consensus        82 ~~~~vlVtGat----------------G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~  144 (399)
                      ..|+||||+|.                ||+|.+|+++|+++|++|+++++........+ ....+..+.+|....+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            46789999775                99999999999999999999987422111111 12234456663333356777


Q ss_pred             Hhc--CCCEEEECCCC
Q 015872          145 TLV--GVHTVIDCATG  158 (399)
Q Consensus       145 ~~~--~~d~Vi~~a~~  158 (399)
                      ++.  ++|+|||+|+.
T Consensus        82 ~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         82 IITHEKVDAVIMAAAG   97 (229)
T ss_pred             HhcccCCCEEEECccc
Confidence            784  69999999993

>PRK05086 malate dehydrogenase; Provisional

Probab=98.54  E-value=7.8e-07  Score=83.45  Aligned_cols=107  Identities=15%  Similarity=0.093  Sum_probs=76.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCCCCCc--cccccCC-cEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPA--DFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~~~~~--~~l~~~~-v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||+|+||||.+|++++..|..   .++++.+++|++....  -.+...+ ...+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            6899999999999999998855   3578899898632110  1122211 123333  234566778899999999999


Q ss_pred             CCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      ...     ..+....|....+++++++++++.+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            422     23455678899999999999999998888876

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.50  E-value=1.9e-07  Score=90.73  Aligned_cols=93  Identities=28%  Similarity=0.404  Sum_probs=71.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-C-cEEEEecCCCCCcccc---ccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEG-Y-DVRCLVRPRPAPADFL---RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g-~-~V~~~~r~~~~~~~~l---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      |+|+|| |++|+.+++.|++.+ + +|++.+|+..+.....   ...+++.++.|+.|.+++.++++++|+||||++.. 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-
Confidence            789999 999999999999986 4 8999999866544333   33579999999999999999999999999999832 


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                                ....++++|.++|+ ++|-.|
T Consensus        79 ----------~~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   79 ----------FGEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             ----------GHHHHHHHHHHHT--EEEESS
T ss_pred             ----------hhHHHHHHHHHhCC-Ceeccc
Confidence                      24578899999887 777644

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.47  E-value=3.9e-07  Score=79.69  Aligned_cols=154  Identities=18%  Similarity=0.165  Sum_probs=106.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-----CcEEEEecCCCCCccccc---------cCCcEEEEccCCCCCcHHHHh-
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG-----YDVRCLVRPRPAPADFLR---------DWGATVVNADLSKPETIPATL-  146 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g-----~~V~~~~r~~~~~~~~l~---------~~~v~~~~~Dl~d~~~l~~~~-  146 (399)
                      +.|-++|||++..+|..++.+|++..     .++.+..|+.++..+...         ...++.++.|+++..++.++. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            45678999999999999999999874     346777787665432211         235889999999977766654 


Q ss_pred             ------cCCCEEEECCCCCCCC--------------------------------------cchhccHHHHHHHHHHHHHc
Q 015872          147 ------VGVHTVIDCATGRPEE--------------------------------------PIKKVDWEGKVALIQCAKAM  182 (399)
Q Consensus       147 ------~~~d~Vi~~a~~~~~~--------------------------------------~~~~~n~~~~~~l~~aa~~~  182 (399)
                            +..|.|+-+||..+.+                                      .+.+.||.|.-.+++.....
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                  4579999999833322                                      12346777766665554432


Q ss_pred             ----CCcEEEEecccCCCC-----------CCCCcHHHHHHHHHHHH-------HhCCCCEEEEecCcccccccc
Q 015872          183 ----GIQKYVFYSIHNCDK-----------HPEVPLMEIKYCTEQFL-------QDSGLPHVIIRLCGFMQGLIG  235 (399)
Q Consensus       183 ----~v~~~V~~Ss~~~~~-----------~~~~~y~~~K~~~E~~l-------~~~g~~~~ilRp~~~~~~~~~  235 (399)
                          ...++|.+||..+.+           ....||..||+..+-+-       +..|+.-.++.||.+..+...
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~  236 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFS  236 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhh
Confidence                234899999987643           34578999999997542       235677788888877655443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.40  E-value=6.1e-07  Score=80.35  Aligned_cols=73  Identities=15%  Similarity=0.163  Sum_probs=51.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC--CCcHHHHhcCCCEEEECCCCCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      ++=-.+||++|.+|++.|+++|++|++++|......  ....+++++.++..+  .+.+.+.++++|+|||+||..+
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            333378999999999999999999999997632211  112356666654332  2445666778999999999544

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.37  E-value=5.3e-07  Score=78.91  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=62.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      +.+.++++|+||+|.+|+.+++.|++.|++|+++.|+.++......    ..+..+..+|..+.+++.+++.++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            4456899999999999999999999999999999997543222111    124566778888888888999999999998


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      .+
T Consensus       105 t~  106 (194)
T cd01078         105 GA  106 (194)
T ss_pred             CC
Confidence            76

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.36  E-value=5.2e-07  Score=77.94  Aligned_cols=182  Identities=16%  Similarity=0.079  Sum_probs=112.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEE--------EEccCCCCCcHHHHhc-------
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATV--------VNADLSKPETIPATLV-------  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~--------~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+-+||||++-.||..++..+.+.+-+.....+++....  +  .+..+        ..+|+++...+.+.++       
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~--~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--L--EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--c--cceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            356899999999999999999999876665555433221  1  12333        3344443332222221       


Q ss_pred             CCCEEEECCCCC--------------CCCcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 GVHTVIDCATGR--------------PEEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ~~d~Vi~~a~~~--------------~~~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                      .-|.|||+||.-              .+..+++.|+.....+...+...    . .+.+|++||...-  -.....|+.+
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~  161 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS  161 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence            369999999910              12345578888888777766443    1 2578999987653  2334569999


Q ss_pred             HHHHHHHHH-----hC-CCCEEEEecCcccccc---------cccchhhhccccccccCCCCcceeceeHHHHHHHHHHH
Q 015872          207 KYCTEQFLQ-----DS-GLPHVIIRLCGFMQGL---------IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       207 K~~~E~~l~-----~~-g~~~~ilRp~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      |++-+.|.+     +. ++.+..++||.+-...         ...-...++++.      .+.. ..++..+.|..+..+
T Consensus       162 KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el------~~~~-~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  162 KAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKEL------KESG-QLLDPQVTAKVLAKL  234 (253)
T ss_pred             HHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHH------HhcC-CcCChhhHHHHHHHH
Confidence            999998874     43 7888899997654211         000011111110      0111 566778888888888


Q ss_pred             HhCC
Q 015872          272 LRNE  275 (399)
Q Consensus       272 l~~~  275 (399)
                      +++.
T Consensus       235 ~e~~  238 (253)
T KOG1204|consen  235 LEKG  238 (253)
T ss_pred             HHhc
Confidence            8875

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.33  E-value=1.8e-06  Score=77.11  Aligned_cols=94  Identities=22%  Similarity=0.407  Sum_probs=72.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      |+++|.|+ |.+|..+++.|.+.||+|.+++++++.....+. ......+.+|-+|++.|.++ +.++|+|+-+.+..  
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d--   77 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND--   77 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC--
Confidence            57899997 999999999999999999999998655444333 35789999999999999988 67899999987722  


Q ss_pred             CcchhccHHHHHHHHHHH-HHcCCcEEE
Q 015872          162 EPIKKVDWEGKVALIQCA-KAMGIQKYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa-~~~~v~~~V  188 (399)
                             .... -++..+ +..|++++|
T Consensus        78 -------~~N~-i~~~la~~~~gv~~vi   97 (225)
T COG0569          78 -------EVNS-VLALLALKEFGVPRVI   97 (225)
T ss_pred             -------HHHH-HHHHHHHHhcCCCcEE
Confidence                   1112 233334 447888766

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.32  E-value=5.1e-07  Score=62.72  Aligned_cols=61  Identities=23%  Similarity=0.322  Sum_probs=37.6

Q ss_pred             HHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH
Q 015872          298 LCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY  377 (399)
Q Consensus       298 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~  377 (399)
                      .+++++|+++++...|..              +.|+..             +.+|+++++++|||+|+  .+|+|+|++.
T Consensus         1 A~e~vtG~~i~~~~~~rR--------------~GD~~~-------------~~Ad~~kA~~~LgW~p~--~~L~~~i~~~   51 (62)
T PF13950_consen    1 AFEKVTGKKIPVEYAPRR--------------PGDPAH-------------LVADISKAREELGWKPK--YSLEDMIRDA   51 (62)
T ss_dssp             HHHHHHTS---EEEE-----------------TT--SE-------------E-B--HHHHHHC----S--SSHHHHHHHH
T ss_pred             CcHHHHCCCCCceECCCC--------------CCchhh-------------hhCCHHHHHHHhCCCcC--CCHHHHHHHH
Confidence            367899999998887654              333333             33789999999999999  7999999999


Q ss_pred             HHHHHHhhHH
Q 015872          378 FTNILKKLKD  387 (399)
Q Consensus       378 ~~~~~~~~~~  387 (399)
                      ++|++++...
T Consensus        52 w~W~~~np~G   61 (62)
T PF13950_consen   52 WNWQKKNPNG   61 (62)
T ss_dssp             HHHHHHSTTT
T ss_pred             HHHHHHCcCC
Confidence            9999887643

...

>cd00704 MDH Malate dehydrogenase

Probab=98.19  E-value=1.3e-05  Score=75.50  Aligned_cols=100  Identities=12%  Similarity=0.065  Sum_probs=70.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-------CcEEEEecCCCCCccccccCCcEEEEccCCCC-----------CcHHHHh
Q 015872           85 SILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAPADFLRDWGATVVNADLSKP-----------ETIPATL  146 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g-------~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-----------~~l~~~~  146 (399)
                      ||.|+||+|.+|+.++..|+..|       +++++++++...  +     ..+....|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--~-----~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--K-----ALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--C-----ccceeeeehhhhcccccCCcEEecChHHHh
Confidence            69999999999999999999865       259999987421  1     122233444443           4567889


Q ss_pred             cCCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC-Cc-EEEEec
Q 015872          147 VGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (399)
Q Consensus       147 ~~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~S  191 (399)
                      +++|+|||+||..     ...+....|....+.+....+++. .+ .+|.+|
T Consensus        75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999999932     123344578888999999999884 44 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.17  E-value=5e-05  Score=72.13  Aligned_cols=77  Identities=23%  Similarity=0.320  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChhHHH--HHHHHHHCCCcEEEEecCCCCC---------------ccccccCC--cEEEEccCCCCCc
Q 015872           81 VRPTSILVVGATGTLGRQ--IVRRALDEGYDVRCLVRPRPAP---------------ADFLRDWG--ATVVNADLSKPET  141 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~--lv~~L~~~g~~V~~~~r~~~~~---------------~~~l~~~~--v~~~~~Dl~d~~~  141 (399)
                      ..+|++|||||++.+|.+  +++.| +.|.+|.++++..++.               .+.+...+  +..+.+|+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            335899999999999999  89999 9999999998643211               11222333  5678999999888


Q ss_pred             HHHHhc-------CCCEEEECCCC
Q 015872          142 IPATLV-------GVHTVIDCATG  158 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~  158 (399)
                      +.++++       ++|++||+++.
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~  141 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcc
Confidence            766653       58999999983

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.13  E-value=1.9e-06  Score=79.16  Aligned_cols=91  Identities=16%  Similarity=0.302  Sum_probs=69.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCcEEEEecCCCCCccccccC---------CcEEEEccCCCCCcHHHHhcCCCE
Q 015872           85 SILVVGATGTLGRQIVRRALD----EGYDVRCLVRPRPAPADFLRDW---------GATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~----~g~~V~~~~r~~~~~~~~l~~~---------~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      -+.|.|||||.|.+++++++.    .|...-+..|+..+..+.|...         ...++.+|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            488999999999999999999    6899999999876544433221         234788999999999999999999


Q ss_pred             EEECCCCCCCCcchhccHHHHHHHHHHHHHcCC
Q 015872          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       152 Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                      |+||+|+..-.         -.+++.+|.+.|.
T Consensus        87 ivN~vGPyR~h---------GE~VVkacienG~  110 (423)
T KOG2733|consen   87 IVNCVGPYRFH---------GEPVVKACIENGT  110 (423)
T ss_pred             EEeccccceec---------CcHHHHHHHHcCC
Confidence            99999942211         1246666666665

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.11  E-value=1.4e-05  Score=76.86  Aligned_cols=100  Identities=18%  Similarity=0.258  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~  159 (399)
                      ++++|.|+||||++|..+++.|.++ +++|..+.++... -+.+.........+|+.+.+.++.. ++++|+||.+.+. 
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~-  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH-  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence            4579999999999999999999998 6899999985332 2222222222333555444444433 6899999998762 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                                ....+++..+ +.| .++|-.|+..-
T Consensus       115 ----------~~s~~i~~~~-~~g-~~VIDlSs~fR  138 (381)
T PLN02968        115 ----------GTTQEIIKAL-PKD-LKIVDLSADFR  138 (381)
T ss_pred             ----------HHHHHHHHHH-hCC-CEEEEcCchhc
Confidence                      2456677776 456 48998988753

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.07  E-value=3.1e-05  Score=73.02  Aligned_cols=100  Identities=12%  Similarity=0.054  Sum_probs=71.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCCCccccccCCcEEEEccCCCCC-----------cHHHHh
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAPADFLRDWGATVVNADLSKPE-----------TIPATL  146 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~-----------~l~~~~  146 (399)
                      +|.|+|++|.+|+.++..|+..|.       +++++++++...       ..+....|+.|..           ...+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999998653       599999864321       1122344444433           456788


Q ss_pred             cCCCEEEECCCCCC-----CCcchhccHHHHHHHHHHHHHcC-Cc-EEEEec
Q 015872          147 VGVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~S  191 (399)
                      +++|+||++||...     ..+....|+...+.+....+++. .+ .+|.+|
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999999999321     23444688888999999999984 43 455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.04  E-value=5e-05  Score=72.13  Aligned_cols=93  Identities=26%  Similarity=0.285  Sum_probs=62.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc---EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~---V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+|+||||++|..|++.|.++||.   +..+.+.... .+.+.-.+.+....|+.+     ..++++|+||.+++. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~~~g~~i~v~d~~~-----~~~~~vDvVf~A~g~-   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELSFKGKELKVEDLTT-----FDFSGVDIALFSAGG-   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeeeeCCceeEEeeCCH-----HHHcCCCEEEECCCh-
Confidence            368999999999999999999998875   4778776332 222222234445555543     234789999999872 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                                ..+..++....+.|+ ++|=.|+.
T Consensus        74 ----------g~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         74 ----------SVSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             ----------HHHHHHHHHHHhCCC-EEEECCch
Confidence                      224566666667777 56656654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.04  E-value=3e-05  Score=73.03  Aligned_cols=150  Identities=13%  Similarity=0.101  Sum_probs=96.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCC--Ccc---ccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PAD---FLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~--~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      ++||.|+|++|.+|+.++..|+..|.       ++.+++++...  ...   .+.+. ...+..+..-.....+.++++|
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~-~~~~~~~~~i~~~~~~~~~daD   80 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDC-AFPLLAEIVITDDPNVAFKDAD   80 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhc-cccccCceEEecCcHHHhCCCC
Confidence            46899999999999999999998874       79999985332  111   11110 0010011000123356789999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCC-c-EEEEecccC----------C-CCCCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI-Q-KYVFYSIHN----------C-DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v-~-~~V~~Ss~~----------~-~~~~~~~y~~~K~~~E~  212 (399)
                      +||.+||..     ...+....|+...+.+.+..++++. . .+|.+|-.-          . .-++...|+.++...++
T Consensus        81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~R  160 (322)
T cd01338          81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNR  160 (322)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHH
Confidence            999999932     2233446788888899999988873 4 555555311          1 13345567778877776


Q ss_pred             HH----HhCCCCEEEEecCcccccc
Q 015872          213 FL----QDSGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       213 ~l----~~~g~~~~ilRp~~~~~~~  233 (399)
                      +-    +..|++...+|...++|+.
T Consensus       161 l~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         161 AKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHHHHHHhCcChhHeEEEEEEeCC
Confidence            43    4578998888887777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.98  E-value=2e-05  Score=76.18  Aligned_cols=176  Identities=15%  Similarity=0.180  Sum_probs=100.2

Q ss_pred             CCCCCeEEEEcC----------------CChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHH
Q 015872           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP  143 (399)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~  143 (399)
                      .+..++|+||||                +|.+|.+++++|.++|++|++++++.. . . . ..+  +...|+++.+++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~-~-~-~~~--~~~~dv~~~~~~~  258 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L-P-T-PAG--VKRIDVESAQEML  258 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c-c-C-CCC--cEEEccCCHHHHH
Confidence            466789999999                999999999999999999999998642 1 1 1 112  3467888877766


Q ss_pred             HHh----cCCCEEEECCCCCCCCcc-------------hhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHH
Q 015872          144 ATL----VGVHTVIDCATGRPEEPI-------------KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEI  206 (399)
Q Consensus       144 ~~~----~~~d~Vi~~a~~~~~~~~-------------~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~  206 (399)
                      +++    ..+|++||+||..+....             ....+.-+..++....+...++-+.++-.....       ..
T Consensus       259 ~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaEt~-------~~  331 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAETG-------DV  331 (399)
T ss_pred             HHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccCCc-------hH
Confidence            655    468999999983221110             112223334466655544322213344322111       11


Q ss_pred             HHHHHHHHHhCCCCEEEEecCcccccccccchhhhccccccccCCCC-cceeceeHHHHHHHHHHHHh
Q 015872          207 KYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAL-TRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       207 K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .-.+.+-+++.++++++...=. .+..++.-    -....++..++. ..++..+-.++|+.|+..+.
T Consensus       332 ~~~A~~kl~~k~~D~ivaN~i~-~~~~fg~~----~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i~  394 (399)
T PRK05579        332 LEYARAKLKRKGLDLIVANDVS-AGGGFGSD----DNEVTLIWSDGGEVKLPLMSKLELARRLLDEIA  394 (399)
T ss_pred             HHHHHHHHHHcCCeEEEEecCC-cCCCcCCC----ceEEEEEECCCcEEEcCCCCHHHHHHHHHHHHH
Confidence            3344556677889999887632 11111100    000011111111 12344556888888888764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.97  E-value=0.00018  Score=69.46  Aligned_cols=172  Identities=12%  Similarity=0.167  Sum_probs=101.5

Q ss_pred             CCCCCeEEEEcC----------------CChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcH-
Q 015872           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI-  142 (399)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l-  142 (399)
                      ++..++|+||||                ||.+|..+++.|..+|++|+++.+.....   . ..++  ...|+.+.+++ 
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~-~~~~--~~~~v~~~~~~~  255 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---T-PPGV--KSIKVSTAEEML  255 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---C-CCCc--EEEEeccHHHHH
Confidence            467799999998                47899999999999999999998764321   1 1122  45788887776 


Q ss_pred             HHHh----cCCCEEEECCCCCCCC-------------cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHH
Q 015872          143 PATL----VGVHTVIDCATGRPEE-------------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME  205 (399)
Q Consensus       143 ~~~~----~~~d~Vi~~a~~~~~~-------------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~  205 (399)
                      .+++    .++|++|++||..++.             ....+++.-+..++...++...++ +.++-.......      
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~-~lvgF~aEt~~~------  328 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQ-VIVGFKAETNDD------  328 (390)
T ss_pred             HHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCc-EEEEEEcCCCcH------
Confidence            4444    3689999999932211             111245555666777766543232 334432222111      


Q ss_pred             HHHHHHHHHHhCCCCEEEEecCcc--cccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          206 IKYCTEQFLQDSGLPHVIIRLCGF--MQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       206 ~K~~~E~~l~~~g~~~~ilRp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      -.-.+.+-+++.+.++++...-.-  |+.-.+..        .++..++...++..+-.++|+.|+..+
T Consensus       329 l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~~--------~li~~~~~~~~~~~~K~~iA~~i~~~~  389 (390)
T TIGR00521       329 LIKYAKEKLKKKNLDMIVANDVSQRGFGSDENEV--------YIFSKHGHKELPLMSKLEVAERILDEI  389 (390)
T ss_pred             HHHHHHHHHHHcCCCEEEEccCCccccCCCCcEE--------EEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence            233455667788999998875321  21111111        111111122334445588998888765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.97  E-value=8.8e-06  Score=76.50  Aligned_cols=72  Identities=19%  Similarity=0.274  Sum_probs=53.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC-C-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDE-G-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~-g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+||||+|++|+.++++|+++ | .+++++.|+..+.. .+..   ++..+|+.   ++.+++.++|+|||+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~-~La~---el~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ-ELQA---ELGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH-HHHH---HhccccHH---hHHHHHccCCEEEECCc
Confidence            456789999999999999999999865 5 68999988744322 2211   22234443   37788999999999998


Q ss_pred             C
Q 015872          158 G  158 (399)
Q Consensus       158 ~  158 (399)
                      .
T Consensus       225 ~  225 (340)
T PRK14982        225 M  225 (340)
T ss_pred             C
Confidence            4

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.96  E-value=9.8e-05  Score=71.90  Aligned_cols=109  Identities=7%  Similarity=0.001  Sum_probs=69.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-------CC--cEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhcCCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-------GY--DVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-------g~--~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      .-+|.|+|++|.+|.+++-.|+..       |.  ++..++++.+......-..  ..-.+..++.=...-.+.++++|+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDi  179 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEW  179 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCE
Confidence            458999999999999999999988       54  7888888755432111000  000000011000012357899999


Q ss_pred             EEECCCCC-----CCCcchhccHHHHHHHHHHHHH-cCCc-EEEEec
Q 015872          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKA-MGIQ-KYVFYS  191 (399)
Q Consensus       152 Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~-~~v~-~~V~~S  191 (399)
                      ||-++|..     ...+..+.|....+.+.....+ ++.. .+|.+|
T Consensus       180 VVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        180 ALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            99999932     2233446788888999999998 5544 555555

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.95  E-value=0.00028  Score=61.42  Aligned_cols=203  Identities=14%  Similarity=0.159  Sum_probs=121.7

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCccc----cccCC-cEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRDWG-ATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~~~-v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|++||+|-.-  -|++.+++.|.++|.++.....++ +..+.    .+..+ ..+++||+++.+++.+.|+     
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            45679999998754  699999999999999998888763 32221    12233 3579999999988887774     


Q ss_pred             --CCCEEEECCCCCCCCc----chhcc-----------HHHHHHHHHHHHHcC--CcEEEEec---ccCCCCCCCCcHHH
Q 015872          148 --GVHTVIDCATGRPEEP----IKKVD-----------WEGKVALIQCAKAMG--IQKYVFYS---IHNCDKHPEVPLME  205 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~~----~~~~n-----------~~~~~~l~~aa~~~~--v~~~V~~S---s~~~~~~~~~~y~~  205 (399)
                        +.|.++|+.+..+.++    +.++.           ......+.++++..-  -.-+|-++   +.-+-+ ..+..+.
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vP-nYNvMGv  160 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVP-NYNVMGV  160 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecC-CCchhHH
Confidence              5899999998544222    22221           222233444444321  12344333   333222 3357899


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccc---cccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC-
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQ---GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN-  274 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~-  274 (399)
                      .|+..|.-++       ..|+++..+-.|-+-.   ..+.. +..+++....   ....+ .-+.++||+.....++.+ 
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~-f~~~l~~~e~---~aPl~-r~vt~eeVG~tA~fLlSdL  235 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD-FRKMLKENEA---NAPLR-RNVTIEEVGNTAAFLLSDL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc-HHHHHHHHHh---hCCcc-CCCCHHHhhhhHHHHhcch
Confidence            9999996442       2467777776654421   11111 1222221111   11222 345589999998888876 


Q ss_pred             -CccCCcEEEEcCCCC
Q 015872          275 -EKINGRTLTFSGPRA  289 (399)
Q Consensus       275 -~~~~g~~~~l~~~~~  289 (399)
                       ....|++.++.+|-.
T Consensus       236 ssgiTGei~yVD~G~~  251 (259)
T COG0623         236 SSGITGEIIYVDSGYH  251 (259)
T ss_pred             hcccccceEEEcCCce
Confidence             344688888887743

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.91  E-value=1.6e-05  Score=72.68  Aligned_cols=92  Identities=20%  Similarity=0.258  Sum_probs=68.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      ..++|-|||||.|..++++|+.+|.+-.+..|+..+....-..++-+.-..++-+++.+.+.+.++++|+||+|+.... 
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~-   85 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY-   85 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccccc-
Confidence            4689999999999999999999999998888986654433344455554555556888999999999999999943211 


Q ss_pred             chhccHHHHHHHHHHHHHcCC
Q 015872          164 IKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v  184 (399)
                              ...|+++|..+|.
T Consensus        86 --------g~plv~aC~~~GT   98 (382)
T COG3268          86 --------GEPLVAACAAAGT   98 (382)
T ss_pred             --------ccHHHHHHHHhCC
Confidence                    1245666666555

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.90  E-value=7.6e-05  Score=70.57  Aligned_cols=95  Identities=22%  Similarity=0.244  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEE--EecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRC--LVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~--~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      +++|+|+||||++|..+++.|.+++|.+.-  ..++..+.-+.+...+   ...++.+.+..  .++++|+||-+.+.  
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~--   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGA--   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCH--
Confidence            368999999999999999999988775443  2233333322222222   22333333322  25789999998761  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                               .....+++.+.+.|+ ++|=.|+..
T Consensus        77 ---------~~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         77 ---------AVSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             ---------HHHHHHHHHHHHCCC-eEEECchhh
Confidence                     124558888888887 566666544

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.86  E-value=2.3e-05  Score=64.66  Aligned_cols=103  Identities=10%  Similarity=0.051  Sum_probs=69.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      |||.|+|++|.+|++++..|...+  .++++++++.......   +.    ..........     ...+.++++|+||.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-----~~~~~~~~aDivvi   75 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-----GDYEALKDADIVVI   75 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-----SSGGGGTTESEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-----ccccccccccEEEE
Confidence            589999999999999999999986  6899999974322111   11    0111111111     12346789999999


Q ss_pred             CCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          155 CATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       155 ~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ++|..     ...+..+.|....+.+.+...+++.+ .++.+|
T Consensus        76 tag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   76 TAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             eccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99932     12333467888889999999998754 455554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.83  E-value=8.9e-05  Score=73.69  Aligned_cols=73  Identities=21%  Similarity=0.198  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ++.|+|+|+|+.+ +|..+++.|+++|++|++.+++.....    ..+...+++++.+|..+     ....++|+||+++
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            4568999999866 999999999999999999999743322    23344578888888876     3456899999999


Q ss_pred             CCC
Q 015872          157 TGR  159 (399)
Q Consensus       157 ~~~  159 (399)
                      |..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            853

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.83  E-value=4.2e-05  Score=81.66  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCc-------------EEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHh
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDE-GYD-------------VRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATL  146 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~-g~~-------------V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~  146 (399)
                      .+++|+|+|+ |++|+.+++.|.+. +++             |.+.+++........... +++.++.|+.|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4679999997 99999999999876 344             777777644333222222 6788999999999999999


Q ss_pred             cCCCEEEECCC
Q 015872          147 VGVHTVIDCAT  157 (399)
Q Consensus       147 ~~~d~Vi~~a~  157 (399)
                      +++|+||++.+
T Consensus       647 ~~~DaVIsalP  657 (1042)
T PLN02819        647 SQVDVVISLLP  657 (1042)
T ss_pred             cCCCEEEECCC
Confidence            99999999987

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.82  E-value=5.6e-05  Score=75.15  Aligned_cols=94  Identities=21%  Similarity=0.297  Sum_probs=70.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      |+|+|+|+ |.+|.++++.|.+.|++|++++++.+.. +.+.. .+++++.||.++.+.+.++ +.++|.||-+....  
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~-~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~--   76 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL-RRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSD--   76 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCCh--
Confidence            57999998 9999999999999999999999975543 23333 5789999999998888888 78999999886521  


Q ss_pred             CcchhccHHHHHHHHHHHHHc-CCcEEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAM-GIQKYVF  189 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~-~v~~~V~  189 (399)
                              .....++..+++. +..++|.
T Consensus        77 --------~~n~~~~~~~r~~~~~~~ii~   97 (453)
T PRK09496         77 --------ETNMVACQIAKSLFGAPTTIA   97 (453)
T ss_pred             --------HHHHHHHHHHHHhcCCCeEEE
Confidence                    1123355566665 5555544

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.78  E-value=0.00013  Score=58.85  Aligned_cols=91  Identities=21%  Similarity=0.343  Sum_probs=58.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCC-C-cccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPA-P-ADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~-~-~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      |||.|.|++|..|+.+++.+.+ .|+++.+.....++ . -+.+.. .+..  ...+.-.+++.++++.+|+||++..  
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~--   76 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTN--   76 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCC--
Confidence            5799999999999999999999 58886666544331 1 111100 0110  1111113668888888999999952  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                               ...+...++.|.++|+ ++|
T Consensus        77 ---------p~~~~~~~~~~~~~g~-~~V   95 (124)
T PF01113_consen   77 ---------PDAVYDNLEYALKHGV-PLV   95 (124)
T ss_dssp             ---------HHHHHHHHHHHHHHT--EEE
T ss_pred             ---------hHHhHHHHHHHHhCCC-CEE
Confidence                     3667789999999987 455

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK04148 hypothetical protein; Provisional

Probab=97.76  E-value=0.00019  Score=57.85  Aligned_cols=92  Identities=13%  Similarity=0.228  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      .++|+++|. | -|.+++..|.+.|++|++++.++. ..+..+..++.++.+|+.+++.  +.-+++|.|+-+=.   +.
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~-aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirp---p~   88 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEK-AVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRP---PR   88 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHH-HHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCC---CH
Confidence            368999997 6 899999999999999999999844 3444455678999999998763  34578999987643   22


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                             +....+++.|++.++.-+|.
T Consensus        89 -------el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         89 -------DLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             -------HHHHHHHHHHHHcCCCEEEE
Confidence                   34668999999999875553

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.72  E-value=0.00023  Score=67.88  Aligned_cols=97  Identities=18%  Similarity=0.173  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccC--CcEEE-EccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDW--GATVV-NADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~--~v~~~-~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +++|+|+||||++|+.+++.|.+. ++++.++.++.. ..+.+...  .+..+ ..++.+.+..  .+.++|+||.|.+.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence            479999999999999999999987 688888777422 22111110  11111 1233333332  45789999998762


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                 .....++..+.++|+ ++|=.|+..
T Consensus        79 -----------~~~~~~v~~a~~aG~-~VID~S~~f  102 (343)
T PRK00436         79 -----------GVSMDLAPQLLEAGV-KVIDLSADF  102 (343)
T ss_pred             -----------HHHHHHHHHHHhCCC-EEEECCccc
Confidence                       234567777777775 788777654

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.71  E-value=0.00026  Score=67.28  Aligned_cols=90  Identities=16%  Similarity=0.227  Sum_probs=59.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEE---EecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRC---LVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~---~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      +|+|+||||++|..+++.|.++||++.-   +.+... ..+.+...+...+..|+.     ...+.++|+||.++|.   
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~-~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~---   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRS-AGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGG---   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecccc-CCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCH---
Confidence            4899999999999999999998887553   335422 222233334556666663     2345799999999872   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                              ..+..++..+.+.|+ ++|=.|+
T Consensus        72 --------~~s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        72 --------SVSKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             --------HHHHHHHHHHHHCCC-EEEECCH
Confidence                    224456666666777 5665554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.71  E-value=0.0002  Score=67.30  Aligned_cols=108  Identities=15%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCC--CCCccc---cccC-CcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPR--PAPADF---LRDW-GATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~--~~~~~~---l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |+|.|+|+||++|..++..|+..|+  +|++++|+.  +.....   +... -......++.-..+. +.++++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            5899999999999999999999986  499999953  111100   0000 000000112111223 358999999999


Q ss_pred             CCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEecc
Q 015872          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (399)
Q Consensus       156 a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss  192 (399)
                      +|...     ..+....|..-.+.+++...+.+.+ .+|.+++
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            98321     1334466778888888888877644 5555664

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.70  E-value=6.1e-05  Score=70.06  Aligned_cols=77  Identities=16%  Similarity=0.223  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCC---CCCccc---ccc--CCcEEEEccCCCCCcHHHHhcCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPR---PAPADF---LRD--WGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~---~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      .++.++++|+|| |.+|++++..|++.|.+ |.++.|+.   ++..+.   +..  .++.+..+|+.+.+++.+.++.+|
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            345688999999 89999999999999986 99999985   222111   111  134566789988888888888999


Q ss_pred             EEEECCC
Q 015872          151 TVIDCAT  157 (399)
Q Consensus       151 ~Vi~~a~  157 (399)
                      +|||+..
T Consensus       202 ilINaTp  208 (289)
T PRK12548        202 ILVNATL  208 (289)
T ss_pred             EEEEeCC
Confidence            9999886

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.70  E-value=0.00035  Score=56.00  Aligned_cols=105  Identities=22%  Similarity=0.267  Sum_probs=62.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccC-----CcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDW-----GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ||.|+||||++|..+++.|.+. .+++..+..+..+.-+.+...     +..-+..+=.+    .+.+.++|+||.|.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD----PEELSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS----GHHHTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc----hhHhhcCCEEEecCch
Confidence            6999999999999999999996 356666555434222222211     12111111112    2345899999999761


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHH
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEI  206 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~  206 (399)
                                 .....+...+.+.|+ ++|=.|+.. -..+..+|+..
T Consensus        77 -----------~~~~~~~~~~~~~g~-~ViD~s~~~-R~~~~~~~~~p  111 (121)
T PF01118_consen   77 -----------GASKELAPKLLKAGI-KVIDLSGDF-RLDDDVPYGLP  111 (121)
T ss_dssp             -----------HHHHHHHHHHHHTTS-EEEESSSTT-TTSTTSEEE-H
T ss_pred             -----------hHHHHHHHHHhhCCc-EEEeCCHHH-hCCCCCCEEeC
Confidence                       335677788888888 666555443 33345566543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.69  E-value=0.00018  Score=57.04  Aligned_cols=92  Identities=22%  Similarity=0.384  Sum_probs=67.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCCcc
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEEPI  164 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~~~  164 (399)
                      |+|+|. |.+|..+++.|.+.+.+|.++++++ ...+.+...++.++.||.+|++.+.++ +++++.||-+..       
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~-~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~-------   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP-ERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD-------   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH-HHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS-------
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc-HHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC-------
Confidence            578887 8999999999999777999999984 334555666899999999999988765 468999998875       


Q ss_pred             hhccHHHHHHHHHHHHHcCC-cEEEE
Q 015872          165 KKVDWEGKVALIQCAKAMGI-QKYVF  189 (399)
Q Consensus       165 ~~~n~~~~~~l~~aa~~~~v-~~~V~  189 (399)
                         |-.....++..+++.+. .+++.
T Consensus        72 ---~d~~n~~~~~~~r~~~~~~~ii~   94 (116)
T PF02254_consen   72 ---DDEENLLIALLARELNPDIRIIA   94 (116)
T ss_dssp             ---SHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             ---CHHHHHHHHHHHHHHCCCCeEEE
Confidence               12335566777777443 35543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.66  E-value=0.00045  Score=63.10  Aligned_cols=86  Identities=20%  Similarity=0.281  Sum_probs=61.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      ++|.|+|++|.+|+.+++.+.+. +.++.++...........       -..++...+++.++++++|+||+++.+    
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p----   70 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTP----   70 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCH----
Confidence            68999999999999999998874 688887664433322211       123444456688888899999999741    


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                             .....++..|.++|+ ++|
T Consensus        71 -------~~~~~~~~~al~~G~-~vv   88 (257)
T PRK00048         71 -------EATLENLEFALEHGK-PLV   88 (257)
T ss_pred             -------HHHHHHHHHHHHcCC-CEE
Confidence                   334678888899897 555

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.63  E-value=0.00027  Score=66.03  Aligned_cols=107  Identities=15%  Similarity=0.100  Sum_probs=70.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-ccccccCCc-EEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-ADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-~~~l~~~~v-~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      |||.|+|++|.+|++++..|+..|  .++.+++.+..+. .-.+.+... ..+.+ ....+++.+.++++|+||-+||..
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~-~~~~~~~y~~~~daDivvitaG~~   79 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTG-YLGPEELKKALKGADVVVIPAGVP   79 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEE-ecCCCchHHhcCCCCEEEEeCCCC
Confidence            589999999999999999999888  5899998861111 111111100 01111 001234667899999999999932


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                           ...+....|....+.+++..++++.+ .++.+|
T Consensus        80 ~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt  117 (310)
T cd01337          80 RKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS  117 (310)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence                 12334467888888899999888755 455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.61  E-value=0.00012  Score=65.62  Aligned_cols=67  Identities=19%  Similarity=0.188  Sum_probs=46.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-------hcCCCEEEECCCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-------LVGVHTVIDCATG  158 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-------~~~~d~Vi~~a~~  158 (399)
                      ++=-.++|.+|.++++.|+++|++|+++++... .    ....  ...+|+.+.+++.+.       +.++|++||+||.
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----~~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----KPEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----cccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            333356899999999999999999999876321 1    1101  134788776655544       3468999999984


Q ss_pred             C
Q 015872          159 R  159 (399)
Q Consensus       159 ~  159 (399)
                      .
T Consensus        91 ~   91 (227)
T TIGR02114        91 S   91 (227)
T ss_pred             c
Confidence            3

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.61  E-value=0.00042  Score=66.13  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=60.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEE-ecCCCCCcccccc--CCcEEE-EccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLRD--WGATVV-NADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~-~r~~~~~~~~l~~--~~v~~~-~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|.|+||||++|..+++.|.+. ++++..+ ++.. ...+.+..  ..+... ..++.+ .+..+.+.++|+||.|.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~-sagk~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE-SAGKPVSEVHPHLRGLVDLNLEP-IDEEEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch-hcCCChHHhCccccccCCceeec-CCHHHhhcCCCEEEECCCc
Confidence            47999999999999999999987 6788855 4432 11111110  111111 111221 1234444689999999862


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                 .....++..+.+.|+ ++|=.|+..
T Consensus        79 -----------~~s~~~~~~~~~~G~-~VIDlS~~f  102 (346)
T TIGR01850        79 -----------GVSAELAPELLAAGV-KVIDLSADF  102 (346)
T ss_pred             -----------hHHHHHHHHHHhCCC-EEEeCChhh
Confidence                       235667777777784 888888764

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.58  E-value=0.00049  Score=65.84  Aligned_cols=97  Identities=12%  Similarity=0.125  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccC-Cc----------EEEEccCCCCCcHHHHhcC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDW-GA----------TVVNADLSKPETIPATLVG  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~-~v----------~~~~~Dl~d~~~l~~~~~~  148 (399)
                      |++++|+|+||||++|+.+++.|++.. .++.++.++..+.-+.+... ..          .-+.....+   .. .+.+
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~-~~~~   76 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD---PE-AVDD   76 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC---HH-HhcC
Confidence            456899999999999999999999875 48888866543322222110 00          000111112   22 2468


Q ss_pred             CCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          149 VHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      +|+|+.+.+.           .....+++.+.+.|++.|...++
T Consensus        77 ~DvVf~a~p~-----------~~s~~~~~~~~~~G~~vIDls~~  109 (349)
T PRK08664         77 VDIVFSALPS-----------DVAGEVEEEFAKAGKPVFSNASA  109 (349)
T ss_pred             CCEEEEeCCh-----------hHHHHHHHHHHHCCCEEEECCch
Confidence            9999887652           12345667777888854444443

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.57  E-value=0.00047  Score=64.96  Aligned_cols=108  Identities=13%  Similarity=0.084  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCC--Ccc---ccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PAD---FLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~--~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +.||.|+|++|++|++++..|+..|.       ++.+++++...  ...   .+.+... ....+..-.....+.++++|
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~~~~~~~~~daD   81 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF-PLLAGVVATTDPEEAFKDVD   81 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccc-cccCCcEEecChHHHhCCCC
Confidence            46899999999999999999998873       79999885321  111   1111000 11111111123456789999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCC-c-EEEEec
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI-Q-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v-~-~~V~~S  191 (399)
                      +||.+||..     ...+....|....+.+...+++++. + .++.+|
T Consensus        82 vVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        82 AALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999932     2234446788888999999998875 4 445554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.55  E-value=0.0012  Score=62.79  Aligned_cols=94  Identities=19%  Similarity=0.202  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc---EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~---V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .++|+|+||||++|..+++.|.+++|.   +..+... ...-+.+...+......++.     .+.+.++|+||.+++. 
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~-rsaGk~~~~~~~~~~v~~~~-----~~~~~~~D~vf~a~p~-   79 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA-RSAGKKVTFEGRDYTVEELT-----EDSFDGVDIALFSAGG-   79 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc-CCCCCeeeecCceeEEEeCC-----HHHHcCCCEEEECCCc-
Confidence            468999999999999999999998874   3333322 11111121123333333332     1345789999998872 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                .....++..+.+.|+ ++|=.|+..
T Consensus        80 ----------~~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         80 ----------SISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             ----------HHHHHHHHHHHhCCC-EEEECCchh
Confidence                      224456666666676 677677643

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.49  E-value=0.00025  Score=66.71  Aligned_cols=101  Identities=21%  Similarity=0.234  Sum_probs=62.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----------cccCCc------EEEEccCCCCCcHHHHhc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRDWGA------TVVNADLSKPETIPATLV  147 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----------l~~~~v------~~~~~Dl~d~~~l~~~~~  147 (399)
                      ++|.|+| .|.+|..++..|+++|++|++++|+++.....          +...+.      ......+.-..++.++++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~   81 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA   81 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence            5799999 69999999999999999999999985432210          111111      000011111235667788


Q ss_pred             CCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          148 GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ++|.||.+...         +......++..+.+......++.||..
T Consensus        82 ~ad~Vi~avpe---------~~~~k~~~~~~l~~~~~~~~ii~ssts  119 (308)
T PRK06129         82 DADYVQESAPE---------NLELKRALFAELDALAPPHAILASSTS  119 (308)
T ss_pred             CCCEEEECCcC---------CHHHHHHHHHHHHHhCCCcceEEEeCC
Confidence            99999998752         122334455555554444555566544

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.48  E-value=0.00097  Score=60.24  Aligned_cols=95  Identities=23%  Similarity=0.296  Sum_probs=75.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      +++|||+|||+= |+.+++.|.+.|++|++.+-.....   ....++.++.|-+.|.+.+.+.++  ++++||+...  |
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATH--P   75 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATH--P   75 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCC--c
Confidence            568999999876 9999999999999998888764333   233477888999888899999986  7999999864  2


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                      ..      ...+.++.++|++.++..+=|
T Consensus        76 fA------~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         76 YA------AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             cH------HHHHHHHHHHHHHhCCcEEEE
Confidence            22      255889999999999864433

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.48  E-value=0.00059  Score=64.77  Aligned_cols=102  Identities=19%  Similarity=0.321  Sum_probs=69.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc------------------------ccccc----CCcE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA------------------------DFLRD----WGAT  130 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~------------------------~~l~~----~~v~  130 (399)
                      .++.++|+|+|+ |.+|+++++.|+..|. ++++++++.-+..                        +.+..    ..++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            344578999997 8899999999999997 7888888641100                        01111    1245


Q ss_pred             EEEccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          131 VVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       131 ~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .+..|++ .+.+.++++++|+||.+..          |......+-++|.+.++ .+|+.+..+
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D----------~~~~r~~in~~~~~~~i-p~i~~~~~g  151 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATD----------NFDTRLLINDLSQKYNI-PWIYGGCVG  151 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence            5666764 3567788899999999863          22333446678888887 567766543

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.46  E-value=0.001  Score=62.36  Aligned_cols=106  Identities=17%  Similarity=0.144  Sum_probs=69.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCC-ccccccCCc-EEEEccCCCCCcHHHHhcCCCEEEECCCCC-
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAP-ADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCATGR-  159 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~-~~~l~~~~v-~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~-  159 (399)
                      ||.|+|++|.+|.+++..|+.+|.  ++.++++++... ...+.+... ..+.+ ..+.+++.+.++++|+||.++|.. 
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~-~~~~~~~~~~~~daDivvitaG~~~   79 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKG-FSGEEGLENALKGADVVVIPAGVPR   79 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEE-ecCCCchHHHcCCCCEEEEeCCCCC
Confidence            589999999999999999998874  799999865111 111111100 01111 001223567899999999999932 


Q ss_pred             ----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       160 ----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                          ...+....|..-.+.+.+...+++.+ .++.+|
T Consensus        80 ~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        80 KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence                22334567888888899888888755 344444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.45  E-value=0.00055  Score=68.07  Aligned_cols=98  Identities=19%  Similarity=0.291  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHH-hcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPAT-LVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~  158 (399)
                      .+++|+|+|+ |.+|..+++.|.+.|++|++++++++. .+.+..  .++.++.||.++++.+.++ ++++|+||-+...
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~-~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~  307 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER-AEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND  307 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence            4688999998 999999999999999999999988543 222322  3688999999999888544 4689999877652


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      .      ..|.    .+...+++.++.++|...
T Consensus       308 ~------~~n~----~~~~~~~~~~~~~ii~~~  330 (453)
T PRK09496        308 D------EANI----LSSLLAKRLGAKKVIALV  330 (453)
T ss_pred             c------HHHH----HHHHHHHHhCCCeEEEEE
Confidence            1      1232    234456677776666443

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.45  E-value=0.00098  Score=59.65  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=74.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEec-CCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r-~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..-||.|.||.|.||+.|...|. ...   +..+.+. +.+.....+.+.+........+-++.|+++++++|+||--||
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCC
Confidence            35689999999999999987555 443   3333332 222233334443333333444446789999999999999999


Q ss_pred             -----CCCCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          158 -----GRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       158 -----~~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                           ....++.+++|..-.+.|..++.++-.+ ++.++|
T Consensus       106 VPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  106 VPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence                 2345677789988899999988877544 455666

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.41  E-value=0.00079  Score=63.95  Aligned_cols=101  Identities=21%  Similarity=0.381  Sum_probs=70.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc------------------------cccccC----CcEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA------------------------DFLRDW----GATV  131 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~------------------------~~l~~~----~v~~  131 (399)
                      +...+|+|+|+ |.+|+.++..|+..|. +|++++++.-+..                        +.+...    .++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            44578999998 9999999999999997 8999998631100                        111111    2455


Q ss_pred             EEccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          132 VNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       132 ~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +..+++ .+.+.+.++++|+||.+..          |......+.++|.+.++ .+|+.++.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D----------n~~~r~~ln~~~~~~~i-P~i~~~~~g  151 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATD----------NFETRFIVNDAAQKYGI-PWIYGACVG  151 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHHHHHhCC-CEEEEeeee
Confidence            566664 3556778899999999853          33445568888999887 577776544

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.41  E-value=0.00094  Score=68.65  Aligned_cols=94  Identities=16%  Similarity=0.264  Sum_probs=73.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .++|+|+|. |.+|+.+++.|.++|+++.+++++++ ..+.+++.+..++.||.+|++.++++ ++++|+||-+...   
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~-~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d---  474 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDIS-AVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE---  474 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHH-HHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC---
Confidence            357999996 99999999999999999999999844 44555667899999999999988766 4689999888651   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                             -.....++..+++...+..|
T Consensus       475 -------~~~n~~i~~~~r~~~p~~~I  494 (601)
T PRK03659        475 -------PEDTMKIVELCQQHFPHLHI  494 (601)
T ss_pred             -------HHHHHHHHHHHHHHCCCCeE
Confidence                   13345677778877654333

>PRK05442 malate dehydrogenase; Provisional

Probab=97.39  E-value=0.00093  Score=63.02  Aligned_cols=108  Identities=13%  Similarity=0.099  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCC--Ccc---ccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PAD---FLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~--~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      ++||.|+|++|.+|+.++..|+..|.       ++.+++++...  ...   .+.+... ....+..=.....+.++++|
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~-~~~~~~~i~~~~y~~~~daD   82 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAF-PLLAGVVITDDPNVAFKDAD   82 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhh-hhcCCcEEecChHHHhCCCC
Confidence            46899999999999999999998763       79999885322  110   1111000 00001100123456789999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC--CcEEEEec
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG--IQKYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~S  191 (399)
                      +||.+||..     ...+....|..-.+.+.+..+++.  -..++.+|
T Consensus        83 iVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         83 VALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999932     223344678888889999998854  23566666

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.35  E-value=0.00012  Score=59.91  Aligned_cols=76  Identities=18%  Similarity=0.335  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +...++|+|+|+ |..|+.++..|.+.|.+ |+++.|+.++........ +..+-..++   +++.+.+..+|+||++.+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~---~~~~~~~~~~DivI~aT~   84 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL---EDLEEALQEADIVINATP   84 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG---GGHCHHHHTESEEEE-SS
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH---HHHHHHHhhCCeEEEecC
Confidence            345689999998 99999999999999976 999999855433322222 112222233   345577889999999987


Q ss_pred             CC
Q 015872          158 GR  159 (399)
Q Consensus       158 ~~  159 (399)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.34  E-value=0.00093  Score=62.90  Aligned_cols=101  Identities=12%  Similarity=0.150  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc-----CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .+||.|+|+ |.+|+.++..|+..|.  ++.+++++.+....   .+..     ..+.+. .     ... +.++++|+|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~-----~~~-~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A-----GDY-SDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e-----CCH-HHhCCCCEE
Confidence            468999998 9999999999999986  89999997543211   1111     112222 1     122 458999999


Q ss_pred             EECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.++|..     ...+....|....+.+++.+++++.+ .++.+|
T Consensus        78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999932     22344567888888888888887755 455555

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.31  E-value=0.00071  Score=63.55  Aligned_cols=100  Identities=13%  Similarity=0.163  Sum_probs=68.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccccC---------CcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDW---------GATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~~---------~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ++|.|+|+ |.+|+.++..|+..|  ++|.+++|+.+.........         ..... .     ... +.++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~-----~~~-~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A-----GDY-SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c-----CCH-HHhCCCCEE
Confidence            37999996 999999999999999  68999999755432211110         11111 1     112 347899999


Q ss_pred             EECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.++|..     ...+....|..-.+.+.+..++++.+ .++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999932     22344467888888899999888754 455555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.29  E-value=0.00047  Score=59.38  Aligned_cols=65  Identities=20%  Similarity=0.333  Sum_probs=40.2

Q ss_pred             cCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC--CCcHHHHhcCCCEEEECCCC
Q 015872           90 GATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        90 GatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      -.||..|.+|++++..+|++|+.+.....-.    ...+++.+..+-.+  .+.+.+.+...|++||+|+.
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAV   92 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSSLP----PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAV   92 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB-
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcccc----ccccceEEEecchhhhhhhhccccCcceeEEEecch
Confidence            5689999999999999999999999863211    12366666654321  12344445678999999983

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.28  E-value=0.00026  Score=59.36  Aligned_cols=75  Identities=13%  Similarity=0.236  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .+.++|+|+|+ |.+|..+++.|.+.| ++|.+.+|+.+.........+...+..+..+   ..+.++++|+||.+.+..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCC
Confidence            34578999998 999999999999996 8899999975443322222222111223333   444578999999998743

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.27  E-value=0.0025  Score=52.12  Aligned_cols=99  Identities=17%  Similarity=0.355  Sum_probs=67.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------cccc--------------C--CcEEEEcc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------FLRD--------------W--GATVVNAD  135 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------~l~~--------------~--~v~~~~~D  135 (399)
                      .++|+|.|+ |.+|+.+++.|...|. ++++++.+.-+...          .+..              +  .++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            368999997 9999999999999996 78888875321110          1100              1  24555556


Q ss_pred             CCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       136 l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      + +.+.+.+.++++|+||.+..          +......+.+.|++.++ .+|+.+..+
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d----------~~~~~~~l~~~~~~~~~-p~i~~~~~g  127 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVD----------SLAARLLLNEICREYGI-PFIDAGVNG  127 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESS----------SHHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred             c-ccccccccccCCCEEEEecC----------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence            6 34557778889999999864          23445668889999887 778777554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.24  E-value=0.001  Score=67.98  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~  157 (399)
                      ..+|+|+|+ |.+|+.+++.|.++|++|.+++++++ ..+.+++.+..++.||.+|++.++++ ++++|.|+-+.+
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~-~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRT-RVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            357999997 99999999999999999999999744 44555667999999999999888765 467898887654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.22  E-value=0.0021  Score=59.65  Aligned_cols=106  Identities=11%  Similarity=0.075  Sum_probs=68.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccCC-cEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~~-v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +||.|+|+ |++|+.++-.|+.++  .++.++++..+....   .+.+.. .......+....+ .+.++++|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            57999999 999999999998775  589999997333211   111110 0000111111111 456889999999998


Q ss_pred             C-----CCCCcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          158 G-----RPEEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       158 ~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      .     ....+..+.|..-.+.+.+...+.+.+- |+.+|
T Consensus        79 ~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          79 VPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            2     2234555788888889999998887654 44444

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.20  E-value=0.0021  Score=66.31  Aligned_cols=90  Identities=17%  Similarity=0.283  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .++|+|+|. |.+|+.+++.|.++|+++++++.+++ ..+.++..+..++.||.+|++.++++ ++++|.||.+...   
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~-~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d---  474 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPD-HIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD---  474 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHH-HHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCC---
Confidence            367999997 99999999999999999999999844 44455667899999999999988754 4578999888641   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                             -+....++..+++...
T Consensus       475 -------~~~n~~i~~~ar~~~p  490 (621)
T PRK03562        475 -------PQTSLQLVELVKEHFP  490 (621)
T ss_pred             -------HHHHHHHHHHHHHhCC
Confidence                   1334567777777654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.17  E-value=0.0014  Score=55.55  Aligned_cols=113  Identities=19%  Similarity=0.181  Sum_probs=68.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      |++|.++|- |..|..+++.|++.||+|.+.+|++++.. .+...+++  .     .++..++.+++|+||-|...    
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~-~~~~~g~~--~-----~~s~~e~~~~~dvvi~~v~~----   67 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAE-ALAEAGAE--V-----ADSPAEAAEQADVVILCVPD----   67 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHH-HHHHTTEE--E-----ESSHHHHHHHBSEEEE-SSS----
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhh-hhHHhhhh--h-----hhhhhhHhhcccceEeeccc----
Confidence            478999997 99999999999999999999999854433 33333421  1     34577888899999998751    


Q ss_pred             cchhccHHHHHHHHHH---HHHcCCc-EEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 015872          163 PIKKVDWEGKVALIQC---AKAMGIQ-KYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~a---a~~~~v~-~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~i  223 (399)
                            -..+..++..   +...... -||-.||..         ...+....+.+.+.|+.++-
T Consensus        68 ------~~~v~~v~~~~~i~~~l~~g~iiid~sT~~---------p~~~~~~~~~~~~~g~~~vd  117 (163)
T PF03446_consen   68 ------DDAVEAVLFGENILAGLRPGKIIIDMSTIS---------PETSRELAERLAAKGVRYVD  117 (163)
T ss_dssp             ------HHHHHHHHHCTTHGGGS-TTEEEEE-SS-----------HHHHHHHHHHHHHTTEEEEE
T ss_pred             ------chhhhhhhhhhHHhhccccceEEEecCCcc---------hhhhhhhhhhhhhccceeee
Confidence                  1233444443   2222222 455555433         45566667777777755543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.14  E-value=0.0012  Score=60.35  Aligned_cols=102  Identities=21%  Similarity=0.272  Sum_probs=76.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ..++|.|+|+.| +|.--++...+.|++|++++++..+..+.++.+|.+++..-..|++.+.++.+--|.++|++..-..
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~  259 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE  259 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence            468999999988 9999999999999999999999778888888899999887777888887777655555555531111


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                              .....++..++..|  ++|+++-..
T Consensus       260 --------~~~~~~~~~lk~~G--t~V~vg~p~  282 (360)
T KOG0023|consen  260 --------HALEPLLGLLKVNG--TLVLVGLPE  282 (360)
T ss_pred             --------cchHHHHHHhhcCC--EEEEEeCcC
Confidence                    11234566666554  789888654

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=97.13  E-value=0.0055  Score=48.61  Aligned_cols=103  Identities=17%  Similarity=0.233  Sum_probs=62.0

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           84 TSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      |+|+|+|+|   +..|..+.+.|.+.|++|+.+.-+....      .|..       -..++.+.-..+|.++.+..   
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i------~G~~-------~y~sl~e~p~~iDlavv~~~---   64 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI------LGIK-------CYPSLAEIPEPIDLAVVCVP---   64 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE------TTEE--------BSSGGGCSST-SEEEE-S----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE------CcEE-------eeccccCCCCCCCEEEEEcC---
Confidence            579999998   7789999999999999999875432110      0111       12334442257898888754   


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                              -.-+..+++.|.+.|++.+++.++            ....++.+++++.|+++.
T Consensus        65 --------~~~~~~~v~~~~~~g~~~v~~~~g------------~~~~~~~~~a~~~gi~vi  106 (116)
T PF13380_consen   65 --------PDKVPEIVDEAAALGVKAVWLQPG------------AESEELIEAAREAGIRVI  106 (116)
T ss_dssp             --------HHHHHHHHHHHHHHT-SEEEE-TT------------S--HHHHHHHHHTT-EEE
T ss_pred             --------HHHHHHHHHHHHHcCCCEEEEEcc------------hHHHHHHHHHHHcCCEEE
Confidence                    245677899999999999998887            222344556677776643

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.11  E-value=0.063  Score=44.37  Aligned_cols=187  Identities=19%  Similarity=0.195  Sum_probs=100.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCC--C-C----CcHHHHhc--CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLS--K-P----ETIPATLV--GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~--d-~----~~l~~~~~--~~d~Vi  153 (399)
                      ..+|+|-||-|-+|+++++.+.+++|-|.-++-...+..+     .-.++.+|-.  + +    +.+.+.+.  .+|.||
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            4579999999999999999999999999988876443322     1112223221  1 1    12233343  589999


Q ss_pred             ECCCCCC------CCcchhccHHHHHHHHHHHH-------HcCCcEEEEecccCC---CCCCCCcHHHHHHHHHHHHH--
Q 015872          154 DCATGRP------EEPIKKVDWEGKVALIQCAK-------AMGIQKYVFYSIHNC---DKHPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       154 ~~a~~~~------~~~~~~~n~~~~~~l~~aa~-------~~~v~~~V~~Ss~~~---~~~~~~~y~~~K~~~E~~l~--  215 (399)
                      +.||...      .+.+.+-++.-...+..-+.       ..+..-++.+.....   ..+....|+..|.++.++.+  
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SL  157 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSL  157 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHHh
Confidence            9998321      11122222222222222221       112223444443221   34456789999999988764  


Q ss_pred             ---hCCCCE----EEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC-cc-CCcEEEEcC
Q 015872          216 ---DSGLPH----VIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE-KI-NGRTLTFSG  286 (399)
Q Consensus       216 ---~~g~~~----~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-~~-~g~~~~l~~  286 (399)
                         ++|++-    ..+-| ...+...++          -|.+..+.. .|+...-+++.+..-.... ++ .|..+.+..
T Consensus       158 aak~SGlP~gsaa~~ilP-VTLDTPMNR----------KwMP~ADfs-sWTPL~fi~e~flkWtt~~~RPssGsLlqi~T  225 (236)
T KOG4022|consen  158 AAKDSGLPDGSAALTILP-VTLDTPMNR----------KWMPNADFS-SWTPLSFISEHFLKWTTETSRPSSGSLLQITT  225 (236)
T ss_pred             cccccCCCCCceeEEEee-eeccCcccc----------ccCCCCccc-CcccHHHHHHHHHHHhccCCCCCCCceEEEEe
Confidence               456552    22222 122222221          122233443 6888888888888777642 22 354555443

>PRK08223 hypothetical protein; Validated

Probab=97.11  E-value=0.0062  Score=55.96  Aligned_cols=103  Identities=15%  Similarity=0.140  Sum_probs=67.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc----------------------cccc--C--CcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD----------------------FLRD--W--GATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~----------------------~l~~--~--~v~~~~  133 (399)
                      +...+|+|+|+ |.+|+.++..|+..| -++.+++.+.-+...                      .+..  .  .++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34567999998 899999999999999 467777765321110                      0111  1  244455


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ..++ ++.+.+.++++|+||++.-.        .++.....+-++|.+.++ .+|+.+..+
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~--------~~~~~r~~ln~~c~~~~i-P~V~~~~~g  154 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDF--------FEFDARRLVFAACQQRGI-PALTAAPLG  154 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCC--------CcHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence            5554 45677888999999977520        012334557788899887 677776544

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.07  E-value=0.0026  Score=60.01  Aligned_cols=108  Identities=13%  Similarity=0.115  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccc-cccCCcEEEE---ccCCCCCcHHHHhcCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF-LRDWGATVVN---ADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~-l~~~~v~~~~---~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ..+||.|+|| |.+|+.++..|+..| .+|.+++++.+..... +.........   ..+....+++ +++++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            3568999997 999999999999888 7899999875432110 1000000000   1111123455 779999999999


Q ss_pred             CCCCC-----CcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          157 TGRPE-----EPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       157 ~~~~~-----~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      |....     .+....|..-.+.+++.+.++..+- ++.+|
T Consensus        82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            73221     2233456666777888888887554 66665

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.04  E-value=0.0051  Score=54.03  Aligned_cols=100  Identities=17%  Similarity=0.327  Sum_probs=62.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------------------ccccC--C--cEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRDW--G--ATVV  132 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------------------~l~~~--~--v~~~  132 (399)
                      .+...+|+|+|+ |.+|..+++.|...|. ++++++.+.-+...                      .+...  .  ++.+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            344578999996 9999999999999995 88988886321111                      01111  1  2223


Q ss_pred             EccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          133 NADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       133 ~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      ..++. .+.+.+.++++|+||.+..          |...-..+-+.|.+.++ .+|+.++
T Consensus        97 ~~~i~-~~~~~~~~~~~D~Vi~~~d----------~~~~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        97 KERVT-AENLELLINNVDLVLDCTD----------NFATRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             hhcCC-HHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            33332 2446667778888888753          22333456677777776 5666654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.03  E-value=0.003  Score=62.28  Aligned_cols=67  Identities=19%  Similarity=0.282  Sum_probs=49.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|+|+||+|.+|..+++.|.+.|++|.+++|+.+.........++..       ..+..+++.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecC
Confidence            479999999999999999999999999999997544222222234321       2235567788999999875

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.03  E-value=0.0047  Score=55.39  Aligned_cols=99  Identities=19%  Similarity=0.295  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------cc------------cc----CCcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------FL------------RD----WGATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------~l------------~~----~~v~~~~  133 (399)
                      +...+|+|+|+ |.+|.++++.|+..|. ++++++.+.-+...          .+            ..    ..++.+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            44578999996 9999999999999995 67777654211110          00            00    1233344


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      .++ +.+.+.+.+.++|+||.|..          |...-..+-++|.+.++ .+|+.+.
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d----------~~~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTD----------NFATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            444 23456667778888888764          12333456777777776 5666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.03  E-value=0.009  Score=49.29  Aligned_cols=97  Identities=25%  Similarity=0.294  Sum_probs=63.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------------------cccc--CC--cEEEEccCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD--WG--ATVVNADLS  137 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------------------~l~~--~~--v~~~~~Dl~  137 (399)
                      +|+|+|+ |.+|..+++.|+..|. ++++++.+.-....                      .+..  +.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4899997 9999999999999996 68888765221110                      0000  12  333444443


Q ss_pred             CCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       138 d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +. ...+.+.++|+||.+..          |......+.++|++.++ .+|..++.+
T Consensus        80 ~~-~~~~~~~~~diVi~~~d----------~~~~~~~l~~~~~~~~i-~~i~~~~~g  124 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAID----------NIAVRRALNRACKELGI-PVIDAGGLG  124 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            32 23566788999999875          23446678888999886 566666544

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.02  E-value=0.0088  Score=52.34  Aligned_cols=102  Identities=18%  Similarity=0.267  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc------------c------------ccc--C--CcEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD------------F------------LRD--W--GATVV  132 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~------------~------------l~~--~--~v~~~  132 (399)
                      +..+|+|+|+.| +|..+++.|+..|. ++++++.+.-....            .            +++  +  .++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            346899999866 99999999999994 68888875321110            0            111  1  23334


Q ss_pred             EccCCC-CCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          133 NADLSK-PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       133 ~~Dl~d-~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      ..++.+ .+...+.+.++|+||.+..          +......+-+.|++.++ .+|+.++.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d----------~~~~~~~ln~~c~~~~i-p~i~~~~~G~  149 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEE----------NYERTAKVNDVCRKHHI-PFISCATYGL  149 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEeecC
Confidence            444432 3345556677888877642          12334456677777776 5666665443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.98  E-value=0.0052  Score=60.99  Aligned_cols=73  Identities=15%  Similarity=0.092  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a  156 (399)
                      +..++|+|+|+.| +|.++++.|++.|++|.+.+++.....   ..+...++.+..++.  ...   .+. ++|.||...
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV~s~   76 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMVKNP   76 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEEECC
Confidence            3467899999976 999999999999999999997643321   334445776665432  111   233 489999999


Q ss_pred             CCC
Q 015872          157 TGR  159 (399)
Q Consensus       157 ~~~  159 (399)
                      |..
T Consensus        77 gi~   79 (447)
T PRK02472         77 GIP   79 (447)
T ss_pred             CCC
Confidence            843

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.98  E-value=0.0018  Score=57.69  Aligned_cols=70  Identities=17%  Similarity=0.201  Sum_probs=47.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-------cCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-------~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      |+|.|+||+|.+|..++..|++.||+|.+.+|+.++......       ..++..   .+. ..+..++++.+|+||-+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~---~~~-~~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDI---KVT-GADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCc---eEE-EeChHHHHhcCCEEEEEC
Confidence            579999999999999999999999999999997544322111       011100   000 012356678899999987


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      .
T Consensus        77 p   77 (219)
T TIGR01915        77 P   77 (219)
T ss_pred             C
Confidence            5

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.98  E-value=0.0039  Score=56.42  Aligned_cols=94  Identities=29%  Similarity=0.376  Sum_probs=69.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-c-cCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-R-DWGATVVNADLSKPETIPATLV--GVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~-~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~  159 (399)
                      |+|||.|||+= |+.|++.|.++|+ |.+.+-..- ..... . .....++.|-+.|.+.+.+.++  +++.||+...  
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~-g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH--   75 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSY-GGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH--   75 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhh-hHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC--
Confidence            68999999876 9999999999998 665554311 11112 1 1357888899888999999885  7999999864  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                      |..      ...+.++.++|++.|+..+-
T Consensus        76 PfA------~~is~na~~a~~~~~ipylR   98 (249)
T PF02571_consen   76 PFA------AEISQNAIEACRELGIPYLR   98 (249)
T ss_pred             chH------HHHHHHHHHHHhhcCcceEE
Confidence            221      25588999999999986333

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.98  E-value=0.003  Score=59.45  Aligned_cols=107  Identities=11%  Similarity=0.102  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccc---ccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL---RDW-GATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l---~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++||.|+|+ |.+|..++..|+..|. +|.+++++.+......   ... ......+.+....+. +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            378999999 9999999999998875 9999999654321111   010 000000111111234 45799999999998


Q ss_pred             CCCCC-----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          158 GRPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       158 ~~~~~-----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .....     +....|+.-...+++...+...+ .+|.+|
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            32211     12235667777777777777644 355554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.97  E-value=0.0085  Score=54.09  Aligned_cols=100  Identities=20%  Similarity=0.238  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccc----------------------ccc--CC--cEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF----------------------LRD--WG--ATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~----------------------l~~--~~--v~~~~  133 (399)
                      ....+|+|+|+ |.+|..++..|+..| -++++++.+.-+....                      +..  ..  ++.+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            34568999997 999999999999998 4677777753221110                      000  12  22332


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ..+ +.+.+.+.++++|+||.+.-          |......+-++|.+.++ .+|+.++.
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D----------~~~~r~~ln~~~~~~~i-p~v~~~~~  148 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTD----------NVEVRNQLNRQCFAAKV-PLVSGAAI  148 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEEec
Confidence            223 23446667778888888763          22334446677777776 56665543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.96  E-value=0.01  Score=52.25  Aligned_cols=88  Identities=23%  Similarity=0.328  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ...++|+|+|| |.+|..-++.|++.|.+|++++....+....+.. .+++++.+++..     ..+.+++.||-+.+..
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~d~   80 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATDDE   80 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCCCH
Confidence            45679999998 9999999999999999999998754333222322 368888888752     2367889888775411


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                                .-...+...|++.++
T Consensus        81 ----------~ln~~i~~~a~~~~i   95 (205)
T TIGR01470        81 ----------ELNRRVAHAARARGV   95 (205)
T ss_pred             ----------HHHHHHHHHHHHcCC
Confidence                      124468888888775

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.95  E-value=0.0052  Score=58.00  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=67.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc-cc--cc----CCc-EEEEccCCCCCcHHHHhcCCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD-FL--RD----WGA-TVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~-~l--~~----~~v-~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      .+||.|+|| |.+|+.++..|+..|. +|.+++++++.... .+  ..    .+. .-+.+    ..++ +.++++|+||
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~----~~d~-~~l~~aDiVI   79 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG----TNNY-EDIAGSDVVI   79 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE----CCCH-HHhCCCCEEE
Confidence            468999995 9999999999999995 89999987553211 11  00    011 11121    1123 4679999999


Q ss_pred             ECCCCCC-CC---------cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGRP-EE---------PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~~-~~---------~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .++|... +.         +....|+.-.+.+++.+.+...+ .++.+|
T Consensus        80 ~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         80 VTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             ECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998321 11         13345777778888888888765 566666

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.95  E-value=0.0032  Score=59.16  Aligned_cols=100  Identities=14%  Similarity=0.079  Sum_probs=65.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccC-----CcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      |+|.|+|+ |.+|..++..|+.+|  .+|.+++++......   .+...     ...+..      .+. +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~------~d~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA------GDY-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee------CCH-HHhCCCCEEE
Confidence            47999998 999999999999999  689999997543221   11111     111111      123 4589999999


Q ss_pred             ECCCCCC--C---CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGRP--E---EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~~--~---~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .+++...  .   .+....|....+.+++..++++.+ .++.++
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998321  1   122345777777888888877654 344443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.93  E-value=0.0063  Score=58.02  Aligned_cols=92  Identities=18%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCc---EEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYD---VRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~---V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|.|+||||++|+.+++.|+++ .++   ++.+....... ...+.  +-.....++.|.+    .+.++|+||.+++.
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~--g~~~~v~~~~~~~----~~~~~Divf~a~~~   75 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFG--GKEGTLQDAFDID----ALKKLDIIITCQGG   75 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccC--CCcceEEecCChh----HhcCCCEEEECCCH
Confidence            68999999999999999966654 666   66655432111 11111  2122333333322    34789999999872


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss  192 (399)
                                 .....+...+.++|++ .+|=.|+
T Consensus        76 -----------~~s~~~~~~~~~aG~~~~VID~Ss   99 (369)
T PRK06598         76 -----------DYTNEVYPKLRAAGWQGYWIDAAS   99 (369)
T ss_pred             -----------HHHHHHHHHHHhCCCCeEEEECCh
Confidence                       2355677777778864 3454444

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.93  E-value=0.0083  Score=56.06  Aligned_cols=81  Identities=15%  Similarity=0.200  Sum_probs=54.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      +.+|.|+||||++|..|++.|.++. .++..+..+...               |+.   .....+.++|+||-+.+.   
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------~~~---~~~~~~~~~DvvFlalp~---   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------DAA---ARRELLNAADVAILCLPD---   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------ccc---CchhhhcCCCEEEECCCH---
Confidence            5789999999999999999999886 355555543211               111   123455789999998751   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                              .....++..+.+.|+ ++|=.|+.
T Consensus        61 --------~~s~~~~~~~~~~g~-~VIDlSad   83 (313)
T PRK11863         61 --------DAAREAVALIDNPAT-RVIDASTA   83 (313)
T ss_pred             --------HHHHHHHHHHHhCCC-EEEECChh
Confidence                    224456666666676 67777764

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.93  E-value=0.011  Score=53.05  Aligned_cols=92  Identities=18%  Similarity=0.289  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEE-ecCCCCCcc-cccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCL-VRPRPAPAD-FLRD-WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~-~r~~~~~~~-~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +++|.|.|++|..|+.+++.+.+.+ +++.+. +|....... .... .++..+..-+.  +++......+|++|++..+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~--~~~~~~~~~~DV~IDFT~P   79 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVT--DDLLLVKADADVLIDFTTP   79 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceee--cchhhcccCCCEEEECCCc
Confidence            5789999999999999999999875 565444 444221110 0000 01111111111  1244556789999999652


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEE
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKY  187 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~  187 (399)
                                 .++...++.|.++++..+
T Consensus        80 -----------~~~~~~l~~~~~~~~~lV   97 (266)
T COG0289          80 -----------EATLENLEFALEHGKPLV   97 (266)
T ss_pred             -----------hhhHHHHHHHHHcCCCeE
Confidence                       568889999999997433

>PRK08328 hypothetical protein; Provisional

Probab=96.91  E-value=0.01  Score=53.25  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRP  116 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~  116 (399)
                      ...+|+|+|+ |.+|.++++.|+..| .++++++.+
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4567999997 999999999999999 467787765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.91  E-value=0.0034  Score=53.21  Aligned_cols=57  Identities=14%  Similarity=0.200  Sum_probs=48.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ....++|+|+|+.+.+|..+++.|.++|.+|.++.|..                      +++.+.+..+|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            46678999999966789999999999999999888862                      3467788899999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.90  E-value=0.018  Score=54.11  Aligned_cols=96  Identities=21%  Similarity=0.260  Sum_probs=68.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      .++|+|+|+ |.+|...++.+...|.+|++++|+.++. +..++++...+...- |++.+.+.-+.+|+||.+++ ..  
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~-~~--  240 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVG-PA--  240 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCC-hh--
Confidence            578999998 5999999999999999999999985543 334455655554433 66666555555999999987 21  


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                              .....++.++..|  ++|.++-..
T Consensus       241 --------~~~~~l~~l~~~G--~~v~vG~~~  262 (339)
T COG1064         241 --------TLEPSLKALRRGG--TLVLVGLPG  262 (339)
T ss_pred             --------hHHHHHHHHhcCC--EEEEECCCC
Confidence                    1234556666555  688888664

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.88  E-value=0.0048  Score=58.06  Aligned_cols=74  Identities=27%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----------cccCCcE--EEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRDWGAT--VVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----------l~~~~v~--~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      .++|.|+|+ |.+|..++..|+..|++|++.+++++.....          +...+..  .....+.-..++.++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            468999997 9999999999999999999999975422110          0011110  01112222345778899999


Q ss_pred             EEEECCC
Q 015872          151 TVIDCAT  157 (399)
Q Consensus       151 ~Vi~~a~  157 (399)
                      .||-++.
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999976

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.85  E-value=0.015  Score=50.85  Aligned_cols=35  Identities=29%  Similarity=0.522  Sum_probs=28.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRP  116 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~  116 (399)
                      .+..+|+|+|+.| +|.++++.|+..|. ++++++.+
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            3456899999855 99999999999995 58888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.85  E-value=0.007  Score=59.37  Aligned_cols=38  Identities=18%  Similarity=0.137  Sum_probs=33.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      |.+|+|.|+|. |++|..++..|+++||+|+++++++.+
T Consensus         1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            34578999986 999999999999999999999997554

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.84  E-value=0.0038  Score=57.32  Aligned_cols=106  Identities=14%  Similarity=0.064  Sum_probs=68.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC----CcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g----~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      |.|+||+|.+|..++..|+..|    .+|.+++++.+.....   +...........+.-.+++.++++++|.||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999998    7999999875432211   11110000011222234467889999999999984


Q ss_pred             CCCC-----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          159 RPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       159 ~~~~-----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ....     .....|+...+.+++..++...+ .++..|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            3221     23346777788888888887644 444444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.83  E-value=0.0077  Score=57.47  Aligned_cols=95  Identities=15%  Similarity=0.166  Sum_probs=55.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEE----------EEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATV----------VNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~----------~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ++|.|+|++|++|++|++.|.+++ .+|..+..+.....+.+... ..+          ....+.+.+ . ..+.++|+|
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~DvV   77 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEA-VKWIEPGDMPEYVRDLPIVEPE-P-VASKDVDIV   77 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhh-ccccccCCCccccceeEEEeCC-H-HHhccCCEE
Confidence            479999999999999999998876 68888854433221111100 000          000000111 1 245789999


Q ss_pred             EECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       153 i~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      +.+.+.           .....+.+.+.+.|++ +|..|+.
T Consensus        78 f~a~p~-----------~~s~~~~~~~~~~G~~-VIDlsg~  106 (341)
T TIGR00978        78 FSALPS-----------EVAEEVEPKLAEAGKP-VFSNASN  106 (341)
T ss_pred             EEeCCH-----------HHHHHHHHHHHHCCCE-EEECChh
Confidence            998861           1233455777777874 5555543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.82  E-value=0.012  Score=53.28  Aligned_cols=100  Identities=20%  Similarity=0.237  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------------------cccc--C--CcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD--W--GATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------------------~l~~--~--~v~~~~  133 (399)
                      ....+|+|+|+ |.+|..+++.|+..|. ++++++.+.-+...                      .+..  .  .++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            44578999998 9999999999999994 77777764221110                      0111  1  233444


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ..++ .+.+.+.++++|+||.+..          |...-..+-++|.+.++ .+|+.++.
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D----------~~~~r~~ln~~~~~~~i-p~v~~~~~  156 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTD----------NVATRNQLNRACFAAKK-PLVSGAAI  156 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCC----------CHHHHHHHHHHHHHhCC-EEEEeeec
Confidence            4443 3446667888999998863          22334457778888886 56765543

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.82  E-value=0.0013  Score=50.22  Aligned_cols=66  Identities=21%  Similarity=0.378  Sum_probs=47.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CcEEEE-ecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEG---YDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g---~~V~~~-~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ||.|+| +|.+|..+++.|++.|   ++|... .|++++..+.....++.+...|      ..++++.+|+||.+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEEEC
Confidence            578885 5999999999999999   999966 7875544443344454444333      5667789999999875

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.82  E-value=0.0056  Score=58.30  Aligned_cols=97  Identities=18%  Similarity=0.227  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.++ .+.++. .++..+ .|..+.+++.+.+     .++|+||++.
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~-~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~  229 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK-VDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNV  229 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence            4689999999999999999988999999998887433 333433 555433 3333222332222     3789999998


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.           ......++..+..|  ++|.++...
T Consensus       230 g~-----------~~~~~~~~~l~~~G--~iv~~G~~~  254 (338)
T cd08295         230 GG-----------KMLDAVLLNMNLHG--RIAACGMIS  254 (338)
T ss_pred             CH-----------HHHHHHHHHhccCc--EEEEecccc
Confidence            72           12334455555443  788777543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.81  E-value=0.019  Score=52.41  Aligned_cols=107  Identities=21%  Similarity=0.235  Sum_probs=67.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc----c------------------ccc--CCcEEEEc-
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD----F------------------LRD--WGATVVNA-  134 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~----~------------------l~~--~~v~~~~~-  134 (399)
                      +...+|+|+|+ |.+|+++++.|+..| -++++++.+.-....    .                  +..  ..+++... 
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            34568999997 999999999999999 678888865221110    0                  000  12222222 


Q ss_pred             cCCCCCcHHHHhc-CCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC
Q 015872          135 DLSKPETIPATLV-GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP  199 (399)
Q Consensus       135 Dl~d~~~l~~~~~-~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~  199 (399)
                      +..+++.+.+.+. ++|.||.+..          ++.....|.++|.+.++ .||.+...+..-+|
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD----------~~~~k~~L~~~c~~~~i-p~I~~gGag~k~dp  161 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAID----------SVRPKAALIAYCRRNKI-PLVTTGGAGGQIDP  161 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEECCcccCCCC
Confidence            2224556666664 6999999875          22345568899999887 56666555543333

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.80  E-value=0.0047  Score=58.47  Aligned_cols=105  Identities=17%  Similarity=0.139  Sum_probs=64.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-------CCcE-EEE-----ccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-------WGAT-VVN-----ADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-------~~v~-~~~-----~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+| +||+|....-.|++.||+|++++.+..+.. .+..       ++++ .++     +-+.=..+..++++.+|
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~-~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad   78 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVE-LLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD   78 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence            6799999 599999999999999999999999743321 1111       1110 011     11322345778899999


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ++|-+.|..+.+ .-..|+.....+++...++..+ ++|.+=
T Consensus        79 v~fIavgTP~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~K  119 (414)
T COG1004          79 VVFIAVGTPPDE-DGSADLSYVEAVAKDIGEILDGKAVVVIK  119 (414)
T ss_pred             EEEEEcCCCCCC-CCCccHHHHHHHHHHHHhhcCCCeEEEEc
Confidence            999999843322 2234555555555555554433 444443

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.80  E-value=0.0077  Score=57.09  Aligned_cols=97  Identities=23%  Similarity=0.308  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCC---cHHHHhc--CCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~---~l~~~~~--~~d~Vi~~a~  157 (399)
                      ..+|||+||+|.+|...++.+...|+.+++.+.+.++.. .++..+...+. |+.+.+   .+.+...  ++|+|+++.|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            578999999999999999999999977777777655544 66666654333 233332   2223332  6999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ..           .....+++.+. + .+++.+...+
T Consensus       221 ~~-----------~~~~~l~~l~~-~-G~lv~ig~~~  244 (326)
T COG0604         221 GD-----------TFAASLAALAP-G-GRLVSIGALS  244 (326)
T ss_pred             HH-----------HHHHHHHHhcc-C-CEEEEEecCC
Confidence            21           11223344333 3 4788877665

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.79  E-value=0.18  Score=49.98  Aligned_cols=115  Identities=15%  Similarity=0.205  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCC---ChhHHHHHHHHHHCCC--cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           82 RPTSILVVGAT---GTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGat---G~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      .+++|+|+|+|   |.+|..+++.|.+.||  +|+.+..+...    +  .++       .-..++.++-+.+|.++-+.
T Consensus         6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~----i--~G~-------~~~~sl~~lp~~~Dlavi~v   72 (447)
T TIGR02717         6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGE----I--LGV-------KAYPSVLEIPDPVDLAVIVV   72 (447)
T ss_pred             CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCc----c--CCc-------cccCCHHHCCCCCCEEEEec
Confidence            46789999998   7799999999999998  56555433111    1  121       11233444445789888775


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                      .           -..+..+++.|.+.|++.+|.+|+...+......  .-.....++.++.|++++
T Consensus        73 p-----------~~~~~~~l~e~~~~gv~~~vi~s~gf~e~g~~g~--~~~~~l~~~a~~~girvl  125 (447)
T TIGR02717        73 P-----------AKYVPQVVEECGEKGVKGAVVITAGFKEVGEEGA--ELEQELVEIARKYGMRLL  125 (447)
T ss_pred             C-----------HHHHHHHHHHHHhcCCCEEEEECCCccccCcchH--HHHHHHHHHHHHcCCEEE
Confidence            4           2446778888999999999888876544322111  111233345566666543

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.78  E-value=0.018  Score=53.94  Aligned_cols=99  Identities=11%  Similarity=0.162  Sum_probs=67.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---cccc-------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRD-------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~-------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ||.|+|+ |.+|+.++..|+.+|  -++.+++.+.+....   .|.+       ..+.+..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 999999999999887  479999986543211   1111       122333222       3578999999


Q ss_pred             EECCCCC--CC-----CcchhccHHHHHHHHHHHHHcCCcEE-EEec
Q 015872          153 IDCATGR--PE-----EPIKKVDWEGKVALIQCAKAMGIQKY-VFYS  191 (399)
Q Consensus       153 i~~a~~~--~~-----~~~~~~n~~~~~~l~~aa~~~~v~~~-V~~S  191 (399)
                      |-+||..  +.     .+....|..-.+.+.....+++..-+ +.+|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999932  11     34446788888999999999886544 4444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.77  E-value=0.017  Score=54.68  Aligned_cols=105  Identities=19%  Similarity=0.177  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +.++|.|+||||++|..+++.|.++.   .++..+.... +.-+.+.-.+.. +..+  +.+.  ..+.++|+||.+++.
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~-saG~~~~~~~~~-~~v~--~~~~--~~~~~~Dvvf~a~p~   76 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE-SAGETLRFGGKS-VTVQ--DAAE--FDWSQAQLAFFVAGR   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC-cCCceEEECCcc-eEEE--eCch--hhccCCCEEEECCCH
Confidence            45789999999999999999999964   4566665432 221112111111 1111  1121  234689999998862


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHH
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME  205 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~  205 (399)
                                 .....++..+.+.|+ ++|=.|+..-..+ ..||+.
T Consensus        77 -----------~~s~~~~~~~~~~g~-~VIDlS~~fRl~~-~vP~~l  110 (336)
T PRK08040         77 -----------EASAAYAEEATNAGC-LVIDSSGLFALEP-DVPLVV  110 (336)
T ss_pred             -----------HHHHHHHHHHHHCCC-EEEECChHhcCCC-CCceEc
Confidence                       224567777767777 6777776543222 335543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.76  E-value=0.0029  Score=55.42  Aligned_cols=70  Identities=24%  Similarity=0.311  Sum_probs=48.3

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCAT  157 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~  157 (399)
                      .++..|+|+|+|. |.+|+++++.|.+.|++|++.+++.+.........+.+.+  |.   +   +++. .+|+++.++.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~   94 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEeccc
Confidence            3566789999998 8999999999999999999988874332221112233322  21   2   2232 7999998876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.75  E-value=0.012  Score=56.39  Aligned_cols=101  Identities=18%  Similarity=0.196  Sum_probs=67.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------------------cccc--C--CcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD--W--GATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------------------~l~~--~--~v~~~~  133 (399)
                      .+..+|+|+|+ |.+|..+++.|+..|. ++++++.+.-+...                      .+..  .  .++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            44578999998 9999999999999994 67777775321110                      0111  1  244444


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ..++ .+...+.++++|+||.+.-          |...-..+-++|.+.++ .+|+.++.+
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d----------~~~~r~~~n~~c~~~~i-p~v~~~~~g  153 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSD----------NFDTRHLASWAAARLGI-PHVWASILG  153 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEEec
Confidence            5554 3456677899999999973          22333446778888887 577776544

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.75  E-value=0.0035  Score=58.25  Aligned_cols=73  Identities=22%  Similarity=0.233  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----------cccCC-cE-----EEEccCCCCCcHHHHh
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRDWG-AT-----VVNADLSKPETIPATL  146 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----------l~~~~-v~-----~~~~Dl~d~~~l~~~~  146 (399)
                      .++|.|+|+ |.+|..++..|+..|++|++++++++.....          +...+ .+     -....++-..++ +.+
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~   82 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDF   82 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHh
Confidence            358999997 9999999999999999999999985543220          11111 00     001111112345 457


Q ss_pred             cCCCEEEECCC
Q 015872          147 VGVHTVIDCAT  157 (399)
Q Consensus       147 ~~~d~Vi~~a~  157 (399)
                      +++|.||-+..
T Consensus        83 ~~~d~ViEav~   93 (286)
T PRK07819         83 ADRQLVIEAVV   93 (286)
T ss_pred             CCCCEEEEecc
Confidence            89999999975

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.74  E-value=0.0035  Score=60.54  Aligned_cols=54  Identities=26%  Similarity=0.371  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .++|.|+||.|.+|..+++.|.+.||+|++.+|+..                     +...+++.++|+||-|..
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCc
Confidence            478999999999999999999999999999998521                     134566789999999986

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.74  E-value=0.016  Score=55.00  Aligned_cols=94  Identities=21%  Similarity=0.268  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCc---EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALD-EGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~-~g~~---V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .++|.|+||||++|+.+++.|.+ ..++   +..+..... .-+.+.-.+.....-++ |++    .+.++|+||.+++.
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~s-aGk~~~~~~~~l~v~~~-~~~----~~~~~Divf~a~~~   78 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRS-AGKTVQFKGREIIIQEA-KIN----SFEGVDIAFFSAGG   78 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECccc-CCCCeeeCCcceEEEeC-CHH----HhcCCCEEEECCCh
Confidence            46899999999999999999995 5666   555554322 11111111111111122 222    34789999998862


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                 .....+...+.+.|+ .+|=.|+..
T Consensus        79 -----------~~s~~~~~~~~~~G~-~VID~Ss~f  102 (347)
T PRK06728         79 -----------EVSRQFVNQAVSSGA-IVIDNTSEY  102 (347)
T ss_pred             -----------HHHHHHHHHHHHCCC-EEEECchhh
Confidence                       225567777777776 566566543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.73  E-value=0.0019  Score=60.19  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc---------CCcEEE--------EccCCCCCcHHHH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---------WGATVV--------NADLSKPETIPAT  145 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~v~~~--------~~Dl~d~~~l~~~  145 (399)
                      .++|.|+|+ |.+|..++..|++.|++|++++++..........         .+....        ...+.-..++.++
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            368999996 9999999999999999999999975432111000         000000        0111112457778


Q ss_pred             hcCCCEEEECCC
Q 015872          146 LVGVHTVIDCAT  157 (399)
Q Consensus       146 ~~~~d~Vi~~a~  157 (399)
                      ++++|.||-+..
T Consensus        82 ~~~aDlVieavp   93 (287)
T PRK08293         82 VKDADLVIEAVP   93 (287)
T ss_pred             hcCCCEEEEecc
Confidence            899999999986

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.72  E-value=0.0049  Score=57.90  Aligned_cols=101  Identities=14%  Similarity=0.082  Sum_probs=66.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccC----C-cEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDW----G-ATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~----~-v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +||.|+|+ |.+|..++..|+..|  .++.+++.+.+....   .+...    . ..+..     ..+.+ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-----~~dy~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-----DKDYS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-----CCCHH-HhCCCCEEE
Confidence            58999996 999999999999887  579999987543211   11110    1 12221     11233 479999999


Q ss_pred             ECCCCCCC-----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~~~-----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .++|....     .+....|..-.+.+.+..++++.+ .++.+|
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            99994221     233357777788888888888754 455555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.71  E-value=0.0064  Score=57.55  Aligned_cols=97  Identities=20%  Similarity=0.256  Sum_probs=63.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.+ ..+.++..++..+ .|..+.+.+.+.+     .++|+||++.|
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~-~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G  216 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE-KVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG  216 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence            468999999999999999988889999999988743 3444455565332 2333332333222     26899999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .           ......++.++..|  ++|.++...
T Consensus       217 ~-----------~~~~~~~~~l~~~G--~iv~~G~~~  240 (325)
T TIGR02825       217 G-----------EFSNTVIGQMKKFG--RIAICGAIS  240 (325)
T ss_pred             H-----------HHHHHHHHHhCcCc--EEEEecchh
Confidence            2           11234445444443  788777543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.71  E-value=0.019  Score=50.81  Aligned_cols=99  Identities=19%  Similarity=0.242  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---------------------cccc--C--CcEEEEc
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---------------------FLRD--W--GATVVNA  134 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---------------------~l~~--~--~v~~~~~  134 (399)
                      +...+|+|+|+ |.+|..++..|...|. ++++++.+.-+...                     .+..  .  .++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            34568999997 9999999999999996 58888876211110                     0000  1  2333444


Q ss_pred             cCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHc-CCcEEEEecc
Q 015872          135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSI  192 (399)
Q Consensus       135 Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss  192 (399)
                      .+++ +.+.+.++++|+||.|.-          |......+.+.|.+. ++ .+|+.+.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D----------~~~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD----------NAETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC----------CHHHHHHHHHHHHHhCCC-CEEEeeh
Confidence            4433 446677889999998842          233445677888887 65 6676653

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.71  E-value=0.021  Score=53.42  Aligned_cols=98  Identities=12%  Similarity=0.182  Sum_probs=66.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc----------------------cccc----CCcEEEEccCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD----------------------FLRD----WGATVVNADLS  137 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~----------------------~l~~----~~v~~~~~Dl~  137 (399)
                      +|||+|+ |.+|..+++.|+..| -++++++.+.-+...                      .+.+    -.++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899997 999999999999999 467777764321110                      0111    13555667776


Q ss_pred             CCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       138 d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +.....+.++++|+||.+.-          |...-..+-+.|.+.++ .||..++.+
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D----------n~~ar~~in~~c~~~~i-p~I~~gt~G  125 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD----------NLAARRHVNKMCLAADV-PLIESGTTG  125 (312)
T ss_pred             CccchHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHCCC-CEEEEecCc
Confidence            65445577889999999863          33445567788888886 577766654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.71  E-value=0.0016  Score=56.27  Aligned_cols=124  Identities=16%  Similarity=0.123  Sum_probs=62.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-------cCCcE-----EE-EccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGAT-----VV-NADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-------~~~v~-----~~-~~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+| .||+|..++..|++.||+|++++.+..... .+.       +.+.+     .+ .+.+.-..+...++..+|
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~-~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad   78 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVE-ALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD   78 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHH-HHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHH-HHhhccccccccchhhhhccccccccchhhhhhhhhhhccc
Confidence            6899997 599999999999999999999999743211 111       11100     00 122222345667778899


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHc-C-CcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCC
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-G-IQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSG  218 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~-~-v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g  218 (399)
                      ++|-|.+..... -...|.......++...+. . -+-+|+-||..        .+.+......++++.+
T Consensus        79 v~~I~VpTP~~~-~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvp--------pGtt~~~~~~ile~~~  139 (185)
T PF03721_consen   79 VVFICVPTPSDE-DGSPDLSYVESAIESIAPVLRPGDLVVIESTVP--------PGTTEELLKPILEKRS  139 (185)
T ss_dssp             EEEE----EBET-TTSBETHHHHHHHHHHHHHHCSCEEEEESSSSS--------TTHHHHHHHHHHHHHC
T ss_pred             eEEEecCCCccc-cCCccHHHHHHHHHHHHHHHhhcceEEEccEEE--------EeeehHhhhhhhhhhc
Confidence            999998721111 1123334444444444332 1 12455555432        2455555566665543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07877 hypothetical protein; Provisional

Probab=96.70  E-value=0.0098  Score=61.82  Aligned_cols=98  Identities=22%  Similarity=0.221  Sum_probs=68.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCc---------ccc------------c----cCCcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPA---------DFL------------R----DWGATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~---------~~l------------~----~~~v~~~~  133 (399)
                      ....+|+|+|+ | +|++++..|+..|.  ++++++.+.-+..         ..+            .    ...++.+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34578999999 8 99999999999984  8888887522110         000            0    01355566


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      ..++ ++.+.+.++++|+||+|.-          |+..-..+-++|.+.++ .+|+-++
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D----------~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECD----------SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            6665 5778889999999999963          34445557788899887 5666664

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.69  E-value=0.0045  Score=59.86  Aligned_cols=68  Identities=24%  Similarity=0.308  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +++|+|+|+ |.+|..++..+.+.|++|++++.++..+...+   .-..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~---ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV---ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh---CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            468999998 89999999999999999999998755443322   234677899999999999999998754

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.68  E-value=0.015  Score=53.96  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=54.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      .+|.|.|||||.|..|++.|.... .++..+.-...               .+   +.+..+.++++|+||.+.+.    
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------------~~---~~~~~~~~~~~D~vFlalp~----   59 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------------KD---AAERAKLLNAADVAILCLPD----   59 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------------cC---cCCHhHhhcCCCEEEECCCH----
Confidence            379999999999999999999984 45655543211               11   12244566789999998751    


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                             .....++..+.+.|+ ++|=.|+.
T Consensus        60 -------~~s~~~~~~~~~~g~-~VIDlSad   82 (310)
T TIGR01851        60 -------DAAREAVSLVDNPNT-CIIDASTA   82 (310)
T ss_pred             -------HHHHHHHHHHHhCCC-EEEECChH
Confidence                   224456666666676 67777764

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.68  E-value=0.0035  Score=58.17  Aligned_cols=71  Identities=18%  Similarity=0.265  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|. |.+|+.+++.|...|.+|++..|+..+... ....+...+     +.+++.+.++++|+||++.+
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~~~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR-ITEMGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            455689999998 999999999999999999999997543221 222233322     23446778889999999875

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.68  E-value=0.0023  Score=59.19  Aligned_cols=74  Identities=22%  Similarity=0.396  Sum_probs=49.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|+ |.+|+.++..|.+.| .+|+++.|+.++........+... ..++ +. .+.+.+.++|+||++.+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~-~~-~~~~~~~~~DivInaTp  194 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL-DL-ELQEELADFDLIINATS  194 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee-cc-cchhccccCCEEEECCc
Confidence            345688999997 999999999999999 799999998544322211111100 0111 11 23456678999999987

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.67  E-value=0.017  Score=51.63  Aligned_cols=101  Identities=21%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------ccc------------cc--CC--cEEEEc
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------DFL------------RD--WG--ATVVNA  134 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------~~l------------~~--~~--v~~~~~  134 (399)
                      +..+|+|+|. |.+|+++++.|+..|. ++++++.+.-...          ..+            ..  ..  ++.+..
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~   88 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE   88 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            4568999997 9999999999999994 7777776421110          000            00  12  333433


Q ss_pred             cCCCCCcHHHHhc-CCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          135 DLSKPETIPATLV-GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       135 Dl~d~~~l~~~~~-~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      .++ ++.+...+. ++|+||.+..          ++.....+.++|.+.++ .+|...+.+.
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD----------~~~~k~~L~~~c~~~~i-p~I~s~g~g~  138 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAID----------SIRAKVALIAYCRKRKI-PVISSMGAGG  138 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCC----------CHHHHHHHHHHHHHhCC-CEEEEeCCcC
Confidence            333 345555554 6999999863          23445678999999887 5665555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.67  E-value=0.015  Score=56.04  Aligned_cols=100  Identities=20%  Similarity=0.314  Sum_probs=67.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------------------cccc--C--CcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD--W--GATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------------------~l~~--~--~v~~~~  133 (399)
                      ....+|+|+|+ |.+|..++..|+..|. ++++++.+.-+...                      .+..  .  .++.+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            44568999997 9999999999999994 88888875221110                      0111  1  244454


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ..++ .+.+.+.++++|+||.|.-          |+..-..+-++|.+.++ .+|+.+..
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~D----------n~~~r~~in~~~~~~~i-P~v~~~~~  165 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSD----------SFATKFLVADAAEITGT-PLVWGTVL  165 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence            4553 4457778899999999863          33444456778888887 57766654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.67  E-value=0.0042  Score=57.95  Aligned_cols=71  Identities=14%  Similarity=0.252  Sum_probs=53.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|. |.+|..++..|...|.+|++.+|+... .......+.+++.     .+++.+.+.++|+||++++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~-~~~~~~~G~~~~~-----~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH-LARITEMGLSPFH-----LSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCeeec-----HHHHHHHhCCCCEEEECCC
Confidence            345689999997 899999999999999999999998443 2223334544332     2457778889999999874

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.65  E-value=0.0085  Score=56.17  Aligned_cols=106  Identities=13%  Similarity=0.061  Sum_probs=66.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccc---cccCC-cEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF---LRDWG-ATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~---l~~~~-v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      |+|.|+|+ |++|..++..|+.+|+ +|.++++........   +.+.+ .....+.+.-..++.+ ++++|.||-++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            57999997 9999999999999886 899999864322111   10000 0001111211123443 6899999999993


Q ss_pred             CCCC-----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          159 RPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       159 ~~~~-----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ....     +....|......+++...+++.+ .+|.+|
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            2211     23346778888888888777643 455555

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.64  E-value=0.021  Score=51.18  Aligned_cols=98  Identities=9%  Similarity=0.153  Sum_probs=65.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------cc------------ccc----CCcEEEEccCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------DF------------LRD----WGATVVNADLS  137 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------~~------------l~~----~~v~~~~~Dl~  137 (399)
                      +|+|+|+ |.+|..+++.|+..|. ++++++.+.-+..          +.            +..    .+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            4899996 9999999999999984 6777777422110          00            001    12556667775


Q ss_pred             CCCcH-HHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          138 KPETI-PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       138 d~~~l-~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +.+.. ...++++|+||.+.-          |+..-..+-+.|.+.++ .+|..++.+
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D----------n~~aR~~ln~~c~~~~i-plI~~g~~G  126 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD----------NIIARRYVNGMLIFLIV-PLIESGTEG  126 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcccC
Confidence            53333 456789999999853          34555667888888886 677776654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.63  E-value=0.0031  Score=54.66  Aligned_cols=67  Identities=15%  Similarity=0.103  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |++.| ||+|.||..++++|.+.||+|.+-.|+.++....... .+..      -...+..++.+.+|+||-...
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~------i~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL------ITGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc------cccCChHHHHhcCCEEEEecc
Confidence            45555 5679999999999999999999998876654332221 1222      123346678889999998864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.61  E-value=0.0075  Score=55.69  Aligned_cols=57  Identities=14%  Similarity=0.250  Sum_probs=47.4

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .....++|+|+|++|.+|+.++..|+++|.+|+++.|..                      ..+.+.++++|+||++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccC
Confidence            356678999999999999999999999999999888731                      235566688999999987

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.60  E-value=0.015  Score=59.48  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=56.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .++.|+|+|+|| |.+|..++..+.+.|++|++++.++..+...+   .-..+.+|+.|.+.+.++.+.+|+|...
T Consensus        19 ~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~---AD~~~v~~~~D~~~l~~~a~~~dvIt~e   90 (577)
T PLN02948         19 GVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSV---AARHVVGSFDDRAAVREFAKRCDVLTVE   90 (577)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh---CceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence            466789999998 89999999999999999999998754333222   1235668899988888888889988543

>PLN02602 lactate dehydrogenase

Probab=96.58  E-value=0.0093  Score=56.82  Aligned_cols=102  Identities=18%  Similarity=0.107  Sum_probs=66.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cccC----CcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRDW----GATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~~~----~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +||.|+|+ |.+|+.++..|+..|  .++.+++.+.+.....   +...    +...+.+    ..+. +.++++|+||-
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~----~~dy-~~~~daDiVVi  111 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA----STDY-AVTAGSDLCIV  111 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe----CCCH-HHhCCCCEEEE
Confidence            69999996 999999999999887  4799999875432111   1110    1111221    1122 34889999999


Q ss_pred             CCCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          155 CATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       155 ~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +||...     ..+....|..-.+.+.+..++++.+ .+|.+|
T Consensus       112 tAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        112 TAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999422     2233456777778888888888754 455555

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.58  E-value=0.02  Score=50.19  Aligned_cols=73  Identities=11%  Similarity=0.174  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecC---CCCCcc------cc------------cc----CCcEEEEc
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRP---RPAPAD------FL------------RD----WGATVVNA  134 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~---~~~~~~------~l------------~~----~~v~~~~~  134 (399)
                      +..++|+|+|+ |.+|+.++..|+..|. +|++++++   .+....      .+            ..    ..++.+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            44578999998 8899999999999998 69999886   211110      01            00    12344445


Q ss_pred             cCCCCCcHHHHhcCCCEEEEC
Q 015872          135 DLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus       135 Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      +++ .+.+.+.++++|+||.+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            554 35577778889999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.56  E-value=0.028  Score=48.05  Aligned_cols=94  Identities=18%  Similarity=0.224  Sum_probs=60.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc---------------------ccccc--C--CcEEEEccCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA---------------------DFLRD--W--GATVVNADLSK  138 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~---------------------~~l~~--~--~v~~~~~Dl~d  138 (399)
                      +|+|+|+ |.+|..+++.|+..|. ++++++.+.-...                     ..+..  .  +++.+...+.+
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            4899997 9999999999999997 5999888641100                     00111  1  23344444433


Q ss_pred             CCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHc-CCcEEEEec
Q 015872          139 PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYS  191 (399)
Q Consensus       139 ~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~S  191 (399)
                       +.+.+.++++|+||.+..          |...-..+.+.+.+. ++ .||+.+
T Consensus        80 -~~~~~~l~~~DlVi~~~d----------~~~~r~~i~~~~~~~~~i-p~i~~~  121 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAFD----------NAETKAMLAESLLGNKNK-PVVCAS  121 (174)
T ss_pred             -hhHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHHCCC-CEEEEe
Confidence             557778889999999842          223334577777776 65 566554

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.55  E-value=0.0036  Score=58.28  Aligned_cols=73  Identities=22%  Similarity=0.280  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEE----------EEccCCCCCcHHHHhc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATV----------VNADLSKPETIPATLV  147 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~----------~~~Dl~d~~~l~~~~~  147 (399)
                      ++|.|+|+ |.+|..++..|++.|++|++++++++.......      ..+++.          ....+.-.+++.++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999998 999999999999999999999998544322110      001000          0001111245667889


Q ss_pred             CCCEEEECCC
Q 015872          148 GVHTVIDCAT  157 (399)
Q Consensus       148 ~~d~Vi~~a~  157 (399)
                      ++|+||-|..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999999976

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.55  E-value=0.0039  Score=60.12  Aligned_cols=74  Identities=16%  Similarity=0.154  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ...+|+|+|+ |.+|..+++.|...|.+|.+++|+..+.. .+.......+..+..+.+.+.+.+.++|+||++++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~-~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR-QLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHHhcCceeEeccCCHHHHHHHHccCCEEEEccc
Confidence            4567999987 99999999999999999999998744322 22111111233455566778888999999999985

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.55  E-value=0.11  Score=50.70  Aligned_cols=67  Identities=15%  Similarity=0.108  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +..++|+|+|. |.+|..+++.|...|.+|++.++++.+... ....++++.        .+.++++++|+||.+.|
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~-A~~~G~~v~--------~l~eal~~aDVVI~aTG  276 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ-AAMDGFRVM--------TMEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH-HHhcCCEec--------CHHHHHhCCCEEEECCC
Confidence            45789999996 999999999999999999999987544321 112243321        25677889999999876

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.54  E-value=0.0077  Score=52.86  Aligned_cols=72  Identities=14%  Similarity=0.194  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|| |-+|...++.|++.|++|+++.+...+....+.. ..+.+...++.     ...+.++|.||-+.+
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~   79 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATN   79 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCC
Confidence            345689999998 9999999999999999999998653222122222 23445443332     234678898888754

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.51  E-value=0.0047  Score=60.61  Aligned_cols=72  Identities=21%  Similarity=0.370  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |.+|..+++.|...| .+|+++.|+..+........+...+.     .+++.+++.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~-----~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVK-----FEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEee-----HHHHHHHHhhCCEEEECCCC
Confidence            44678999997 999999999999999 78999999754433222222333222     23567778899999999763

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.51  E-value=0.012  Score=49.32  Aligned_cols=69  Identities=12%  Similarity=0.187  Sum_probs=46.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .++.++|+|+|| |.+|...++.|++.|++|+++...   ..+.+... .+++....+..     +-++++|.||-+..
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~---~~~~l~~l~~i~~~~~~~~~-----~dl~~a~lViaaT~   79 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE---ICKEMKELPYITWKQKTFSN-----DDIKDAHLIYAATN   79 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc---cCHHHHhccCcEEEecccCh-----hcCCCceEEEECCC
Confidence            455789999998 999999999999999999988532   22222222 34444333322     22567888888653

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.51  E-value=0.0084  Score=56.39  Aligned_cols=53  Identities=25%  Similarity=0.439  Sum_probs=45.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .|+|.|+|+ |.+|..+++.|.+.||+|++.+|+..                     +++.++++++|+||-+..
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~---------------------~~~~~~~~~advvi~~vp   56 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG---------------------LSLAAVLADADVIVSAVS   56 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC---------------------CCHHHHHhcCCEEEEECC
Confidence            468999986 99999999999999999999999732                     346677889999999875

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.50  E-value=0.0071  Score=56.76  Aligned_cols=68  Identities=24%  Similarity=0.312  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +++|.|+|| |.+|+-++......|++|++++-+.+.++..+   .-..+.++..|++.+.++.+.+|+|=.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v---a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV---ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc---ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            367999998 99999999999999999999998766655433   235677888899999999999999843

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.49  E-value=0.014  Score=58.48  Aligned_cols=75  Identities=21%  Similarity=0.196  Sum_probs=55.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ...++|+|+|+ |.+|..+++.|.++|++|+++++.....    .+.+...+++++.++-..      ...++|.||...
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~   86 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP   86 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence            34578999997 9999999999999999999998764322    233555688887765322      235789999998


Q ss_pred             CCCCCC
Q 015872          157 TGRPEE  162 (399)
Q Consensus       157 ~~~~~~  162 (399)
                      |..+..
T Consensus        87 Gi~~~~   92 (480)
T PRK01438         87 GWRPDA   92 (480)
T ss_pred             CcCCCC
Confidence            855443

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.48  E-value=0.055  Score=49.71  Aligned_cols=95  Identities=20%  Similarity=0.332  Sum_probs=58.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEec-CCCCCc-cccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVR-PRPAPA-DFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r-~~~~~~-~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ++|.|+|++|.+|+.+++.+.+. +.++.++.. ..+... ..+... +..  ..++.-.++++++...+|+||.+..+ 
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~--~~gv~~~~d~~~l~~~~DvVIdfT~p-   78 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIG--KVGVPVTDDLEAVETDPDVLIDFTTP-   78 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcC--cCCceeeCCHHHhcCCCCEEEECCCh-
Confidence            58999999999999999999874 788888664 322211 111000 000  00111112344443569999998741 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                                .....++..|.++|+ ++|.-++
T Consensus        79 ----------~~~~~~~~~al~~g~-~vVigtt  100 (266)
T TIGR00036        79 ----------EGVLNHLKFALEHGV-RLVVGTT  100 (266)
T ss_pred             ----------HHHHHHHHHHHHCCC-CEEEECC
Confidence                      446678889999996 5554443

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.48  E-value=0.0065  Score=57.87  Aligned_cols=75  Identities=23%  Similarity=0.387  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc----CCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~----~~d~Vi~~a~  157 (399)
                      ..+.|||.||+|.+|++.++-+...|..+++.+++ .+..+..+..|.. ...|+.+++..+...+    ++|+|++|+|
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-~e~~~l~k~lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg  234 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-KEKLELVKKLGAD-EVVDYKDENVVELIKKYTGKGVDVVLDCVG  234 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-cchHHHHHHcCCc-EeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence            35789999999999999999999999444444444 3334445555532 3457777554444433    5999999998


Q ss_pred             C
Q 015872          158 G  158 (399)
Q Consensus       158 ~  158 (399)
                      .
T Consensus       235 ~  235 (347)
T KOG1198|consen  235 G  235 (347)
T ss_pred             C
Confidence            4

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.47  E-value=0.022  Score=55.22  Aligned_cols=88  Identities=13%  Similarity=0.142  Sum_probs=64.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      +.+|+|+|. |.+|+.+++.|.++|++|.+++.+..   +.....+..++.||.+|++.+.++ +++++.||-+....  
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~---~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~dD--  313 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL---EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRDND--  313 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh---hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCCCh--
Confidence            467999986 89999999999999999999986522   222334788999999999888765 46789998776421  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                              .....++..+++.+.
T Consensus       314 --------~~Nl~ivL~ar~l~p  328 (393)
T PRK10537        314 --------ADNAFVVLAAKEMSS  328 (393)
T ss_pred             --------HHHHHHHHHHHHhCC
Confidence                    112345556777664

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.46  E-value=0.027  Score=43.58  Aligned_cols=88  Identities=24%  Similarity=0.295  Sum_probs=59.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      .+.++|+|+|| |.+|..=++.|++.|.+|+++....    ... +..+++..-++      .+.+.+++.||-+.+   
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~-~~~i~~~~~~~------~~~l~~~~lV~~at~---   69 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFS-EGLIQLIRREF------EEDLDGADLVFAATD---   69 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHH-HTSCEEEESS-------GGGCTTESEEEE-SS---
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhh-hhHHHHHhhhH------HHHHhhheEEEecCC---
Confidence            45689999998 9999999999999999999999873    111 12455544433      344788998886654   


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                             |-.....+.+.|++.++  +|++..
T Consensus        70 -------d~~~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   70 -------DPELNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             --------HHHHHHHHHHHHHTTS--EEEETT
T ss_pred             -------CHHHHHHHHHHHhhCCE--EEEECC
Confidence                   11334568888888875  566653

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.45  E-value=0.016  Score=56.94  Aligned_cols=73  Identities=18%  Similarity=0.246  Sum_probs=49.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-------CcE-----EE-EccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-------GAT-----VV-NADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-------~v~-----~~-~~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+|. |++|..++..|++.||+|++++++..+... +...       +++     .+ .+.+.-..++.++++++|
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~-l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDK-LNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHH-hhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            47999985 999999999999999999999997543222 2110       000     00 011222234666788999


Q ss_pred             EEEECCCC
Q 015872          151 TVIDCATG  158 (399)
Q Consensus       151 ~Vi~~a~~  158 (399)
                      +||-|.+.
T Consensus        79 vvii~vpt   86 (411)
T TIGR03026        79 VIIICVPT   86 (411)
T ss_pred             EEEEEeCC
Confidence            99999873

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.45  E-value=0.011  Score=54.66  Aligned_cols=57  Identities=12%  Similarity=0.169  Sum_probs=48.7

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+...|+|.|+|.+|.+|..++..|+++|++|++..|...                      ++.++.+.+|+||-+.|
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------~l~e~~~~ADIVIsavg  211 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------DAKALCRQADIVVAAVG  211 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecC
Confidence            4667899999999999999999999999999999977532                      36667788898888887

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.42  E-value=0.014  Score=55.00  Aligned_cols=96  Identities=24%  Similarity=0.280  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC-CCcHHHHhcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK-PETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++... .+.+...+...+. |..+ .+.+.+ +.++|.|++++|..  
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~d~v~~~~g~~--  237 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK-LKILKELGADYVI-DGSKFSEDVKK-LGGADVVIELVGSP--  237 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHcCCcEEE-ecHHHHHHHHh-ccCCCEEEECCChH--
Confidence            4689999999999999999999999999999986433 3333333432221 2222 111222 23799999998722  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                               .....++.....  .++|.++...
T Consensus       238 ---------~~~~~~~~~~~~--g~~v~~g~~~  259 (332)
T cd08259         238 ---------TIEESLRSLNKG--GRLVLIGNVT  259 (332)
T ss_pred             ---------HHHHHHHHhhcC--CEEEEEcCCC
Confidence                     122344444433  3788887654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.42  E-value=0.025  Score=55.02  Aligned_cols=101  Identities=16%  Similarity=0.185  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------c------------cccc--CC--cEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------D------------FLRD--WG--ATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------~------------~l~~--~~--v~~~~  133 (399)
                      +...+|+|+|+ |.+|..++..|+..|. ++++++.+.-+..          .            .+..  ..  ++.+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            34568999997 9999999999999995 6777776421110          0            0111  12  34444


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .+++. +.+.+.++++|+||.|..          |...-..+-++|.+.++ .||+.++.+
T Consensus       119 ~~i~~-~~~~~~~~~~D~Vvd~~d----------~~~~r~~ln~~~~~~~~-p~v~~~~~g  167 (392)
T PRK07878        119 FRLDP-SNAVELFSQYDLILDGTD----------NFATRYLVNDAAVLAGK-PYVWGSIYR  167 (392)
T ss_pred             ccCCh-hHHHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence            55543 456678899999999863          22333446788888886 577776554

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.40  E-value=0.014  Score=56.45  Aligned_cols=100  Identities=18%  Similarity=0.262  Sum_probs=62.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------------------ccccc--CCc--EEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------------------DFLRD--WGA--TVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------------------~~l~~--~~v--~~~~  133 (399)
                      +..++|+|+|+ |.+|..++..|+..|. ++++++++.-...                      +.+..  ..+  +.+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            44578999987 8899999999999996 7888887621110                      00111  122  2333


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ..+. .+.+.+.++++|+||++..          |...-..+-++|.+.++ .+|+.+..
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d----------~~~~r~~ln~~~~~~~i-p~i~~~~~  259 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGAD----------NFPTRYLLNDACVKLGK-PLVYGAVF  259 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEec
Confidence            3332 2446667788888888864          12223346677888776 66766544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.38  E-value=0.04  Score=51.77  Aligned_cols=68  Identities=24%  Similarity=0.386  Sum_probs=52.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ....++|.|+|- |.||+.+++.|..-|++|++.+|......      ++..+    ...+++.++++++|+|+.+...
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~----~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSF----AGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceee----cccccHHHHHhcCCEEEECCCC
Confidence            456789999995 99999999999999999999998643211      22211    1345799999999999988763

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.37  E-value=0.63  Score=43.09  Aligned_cols=91  Identities=18%  Similarity=0.142  Sum_probs=63.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~~~~  160 (399)
                      ..+|+|.|-||.+|+.+.+.|+..|+++.+-+... +....+         ..+.-..++.++-+.  +|.++-+.+.  
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~p~-~~~~~v---------~G~~~y~sv~dlp~~~~~Dlavi~vpa--   73 (286)
T TIGR01019         6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVTPG-KGGTTV---------LGLPVFDSVKEAVEETGANASVIFVPA--   73 (286)
T ss_pred             CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEECCC-CCccee---------cCeeccCCHHHHhhccCCCEEEEecCH--
Confidence            45799999999999999999999999866655432 111111         122223445555554  7998888651  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                               .....+++.|.+.|++.+|.+|+..
T Consensus        74 ---------~~v~~~l~e~~~~Gvk~avIis~Gf   98 (286)
T TIGR01019        74 ---------PFAADAIFEAIDAGIELIVCITEGI   98 (286)
T ss_pred             ---------HHHHHHHHHHHHCCCCEEEEECCCC
Confidence                     3456788888889999888888654

ATP citrate lyases appear to form an outgroup.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.36  E-value=0.0026  Score=58.94  Aligned_cols=71  Identities=14%  Similarity=0.228  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccC-----CcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW-----GATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      ...++|+|+|+ |..|++++..|.+.|. +|++++|+.++........     ...+.     ..+++.+.+.++|+||+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~-----~~~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT-----AGSDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE-----eccchHhhhCCCCEEEE
Confidence            34578999997 8899999999999996 7999999855433222111     11111     12335556788999999


Q ss_pred             CCC
Q 015872          155 CAT  157 (399)
Q Consensus       155 ~a~  157 (399)
                      +..
T Consensus       199 aTp  201 (284)
T PRK12549        199 ATP  201 (284)
T ss_pred             CCc
Confidence            954

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.35  E-value=0.0085  Score=56.53  Aligned_cols=90  Identities=21%  Similarity=0.182  Sum_probs=68.0

Q ss_pred             HhcCCCEEEECCCCC------CCCcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC-CCCCcHHHHHHHHHHH
Q 015872          145 TLVGVHTVIDCATGR------PEEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK-HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       145 ~~~~~d~Vi~~a~~~------~~~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~-~~~~~y~~~K~~~E~~  213 (399)
                      .+.+++.+|++-|..      ....+..++++-+..|+++..    +.+.|++|.++|.+... ....+|.+.|...|+-
T Consensus       200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~s~~f~Yfk~K~~LE~d  279 (410)
T PF08732_consen  200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAISSMFPYFKTKGELEND  279 (410)
T ss_pred             chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchhhhhhhhhHHHHHHHHH
Confidence            345678889988832      234455677777777887777    77889999999998766 4457999999999999


Q ss_pred             HHhCC----CCEEEEecCccccccc
Q 015872          214 LQDSG----LPHVIIRLCGFMQGLI  234 (399)
Q Consensus       214 l~~~g----~~~~ilRp~~~~~~~~  234 (399)
                      ++...    -..+|+|||-+.|...
T Consensus       280 l~~~l~~~l~~lvILRPGplvG~h~  304 (410)
T PF08732_consen  280 LQNLLPPKLKHLVILRPGPLVGEHG  304 (410)
T ss_pred             HHhhcccccceEEEecCccccCCCC
Confidence            97642    3589999998876543

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.014  Score=53.63  Aligned_cols=57  Identities=12%  Similarity=0.258  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ....++|+|+|.++.+|..++..|+++|.+|+++.+..                      ..+.+.++.+|+||.+.|.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCC
Confidence            56679999999999999999999999999999998752                      2366778899999998873

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.32  E-value=0.0084  Score=55.90  Aligned_cols=36  Identities=31%  Similarity=0.412  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      .++|.|+|+ |.+|..++..|+..|++|++++++++.
T Consensus         3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   38 (291)
T PRK06035          3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEI   38 (291)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            368999997 999999999999999999999997543

>PLN02928 oxidoreductase family protein

Probab=96.31  E-value=0.023  Score=54.25  Aligned_cols=78  Identities=15%  Similarity=0.186  Sum_probs=53.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc-c--ccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF-L--RDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~-l--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ....++|.|+|- |.||+.+++.|...|.+|++.+|........ +  ....+..+.......+++.++++.+|+|+.+.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            466799999996 9999999999999999999998863221110 0  00011111111124567999999999999887


Q ss_pred             CC
Q 015872          157 TG  158 (399)
Q Consensus       157 ~~  158 (399)
                      ..
T Consensus       235 Pl  236 (347)
T PLN02928        235 TL  236 (347)
T ss_pred             CC
Confidence            63

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=96.30  E-value=0.018  Score=57.17  Aligned_cols=93  Identities=13%  Similarity=0.117  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEc-------cCCCCCcHHHHhc--CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNA-------DLSKPETIPATLV--GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~-------Dl~d~~~l~~~~~--~~d~Vi  153 (399)
                      +|||||.|+ |.++..+++.+.+.|++|++++.+...........+ +.+..       |+.|.+.+.++..  ++|+|+
T Consensus         2 ~kkili~g~-g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~aD-~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~   79 (449)
T TIGR00514         2 LDKILIANR-GEIALRILRACKELGIKTVAVHSTADRDALHVLLAD-EAVCIGPAPSAKSYLNIPNIISAAEITGADAIH   79 (449)
T ss_pred             cceEEEeCC-CHHHHHHHHHHHHcCCeEEEEEChhhhcccccccCC-EEEEcCCCCchhchhCHHHHHHHHHHhCCCEEE
Confidence            679999976 999999999999999999999864332211111112 22221       3334344554433  799999


Q ss_pred             ECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       154 ~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                      -..+...+.          ..+.+.+++.|+ +|+
T Consensus        80 pg~g~~se~----------~~~a~~~e~~Gi-~~~  103 (449)
T TIGR00514        80 PGYGFLSEN----------ANFAEQCERSGF-TFI  103 (449)
T ss_pred             eCCCccccC----------HHHHHHHHHCCC-cEE
Confidence            876421111          124566777776 444

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.27  E-value=0.02  Score=52.66  Aligned_cols=66  Identities=15%  Similarity=0.201  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +|+|.|+|+ |.+|..+++.|.+.|   ++|.+++|+.+.. +.+.. .++..       ..+..+++..+|+||-+..
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~-~~~~~~~g~~~-------~~~~~~~~~~advVil~v~   71 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKR-AALAEEYGVRA-------ATDNQEAAQEADVVVLAVK   71 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHH-HHHHHhcCCee-------cCChHHHHhcCCEEEEEcC
Confidence            578999996 999999999999998   7899999975432 22222 23321       1234456678999998764

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=96.26  E-value=0.023  Score=56.46  Aligned_cols=93  Identities=13%  Similarity=0.147  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEE-c------cCCCCCcHHHHh--cCCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN-A------DLSKPETIPATL--VGVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~-~------Dl~d~~~l~~~~--~~~d~Vi  153 (399)
                      +|+|||.|+ |.+|..+++.+.+.|++|++++.+............ +.+. +      ++.|.+.+.++.  .++|+|+
T Consensus         2 ~k~iLi~g~-g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~ad-~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~   79 (451)
T PRK08591          2 FDKILIANR-GEIALRIIRACKELGIKTVAVHSTADRDALHVQLAD-EAVCIGPAPSKKSYLNIPAIISAAEITGADAIH   79 (451)
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhHCC-EEEEeCCCCcccccCCHHHHHHHHHHhCCCEEE
Confidence            589999986 999999999999999999998665333221111112 2222 2      233444454443  3799998


Q ss_pred             ECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       154 ~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                      -..+...+.          ..+.+.+++.|+ +++
T Consensus        80 p~~~~~~e~----------~~~~~~~e~~gi-~~~  103 (451)
T PRK08591         80 PGYGFLSEN----------ADFAEICEDSGF-TFI  103 (451)
T ss_pred             ECCCccccC----------HHHHHHHHHCCC-ceE
Confidence            866421111          134666677776 444

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.26  E-value=0.0048  Score=57.20  Aligned_cols=77  Identities=17%  Similarity=0.085  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |..|+.++..|.+.|. +|+++.|+.++........+.......+...+++...+.++|+||++.+.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            35678999997 9999999999999995 79999998554433222111100001111113344556789999999874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.25  E-value=0.021  Score=52.54  Aligned_cols=92  Identities=14%  Similarity=0.171  Sum_probs=57.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |++++|.|+|. |.+|+.+++.|.+.  +++|.++....+...+.+ ...+..      .-.+++.+++.++|+|+-|++
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~------~~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRP------PPVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCC------cccCCHHHHhcCCCEEEECCC
Confidence            55689999996 99999999999874  788875544323222222 111211      112346666788999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      ..           ....+...+.++|. +++..|
T Consensus        77 ~~-----------~h~e~~~~aL~aGk-~Vi~~s   98 (271)
T PRK13302         77 AS-----------VLRAIVEPVLAAGK-KAIVLS   98 (271)
T ss_pred             cH-----------HHHHHHHHHHHcCC-cEEEec
Confidence            21           13445566666674 566544

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.25  E-value=0.0028  Score=53.26  Aligned_cols=84  Identities=15%  Similarity=0.262  Sum_probs=53.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--------CCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--------WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--------~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ||.|+|| |..|.+++..|..+|++|.+..|+.+. .+.+..        .++.. ...+.=..++.++++++|+||.+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~-~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQ-IEEINETRQNPKYLPGIKL-PENIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHH-HHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHH-HHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCcccEEEecc
Confidence            5899997 999999999999999999999997421 111111        01111 111111345888999999999876


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHc
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAM  182 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~  182 (399)
                      ..           .+...+++..+.+
T Consensus        78 Ps-----------~~~~~~~~~l~~~   92 (157)
T PF01210_consen   78 PS-----------QAHREVLEQLAPY   92 (157)
T ss_dssp             -G-----------GGHHHHHHHHTTT
T ss_pred             cH-----------HHHHHHHHHHhhc
Confidence            41           3455566666554

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.23  E-value=0.016  Score=56.15  Aligned_cols=109  Identities=11%  Similarity=-0.024  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc------CCcEE----EEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATV----VNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~------~~v~~----~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      |+|.|+|. |++|..++..|+ .||+|++++++..+.......      .+++-    -.+.++...+..++.+++|+||
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            47999975 999999996655 599999999975442221110      01000    0111222222445668899999


Q ss_pred             ECCCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccC
Q 015872          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHN  194 (399)
Q Consensus       154 ~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~  194 (399)
                      -|.+..........|+.....+++...+.. -+-+|..||..
T Consensus        79 i~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~  120 (388)
T PRK15057         79 IATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP  120 (388)
T ss_pred             EeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence            998743221111233344444444333322 23566666654

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.23  E-value=0.016  Score=54.28  Aligned_cols=99  Identities=16%  Similarity=0.130  Sum_probs=65.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cccC-----CcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           86 ILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRDW-----GATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |.|+|+ |++|..++..|+..|  +++.+++++.+.....   +.+.     ...+..+     .+ .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~-----~~-~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG-----GD-YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC-----CC-HHHhCCCCEEEEc
Confidence            468897 899999999999998  7899999975432211   1110     1111111     11 3578999999999


Q ss_pred             CCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       156 a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +|...     ..+....|+...+.+++..++++.+ .++.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99322     2233346777788888888888754 455555

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=96.23  E-value=0.025  Score=56.47  Aligned_cols=76  Identities=18%  Similarity=0.155  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEc------cCCCCCcHHHHhc--CCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNA------DLSKPETIPATLV--GVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~------Dl~d~~~l~~~~~--~~d~V  152 (399)
                      .+.|+|||.|+ |.++..+++.+.+.|++++++..+.+..........-.+..+      |+.|.+.+.++.+  ++|+|
T Consensus         3 ~~~~~vLi~~~-geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~~aD~~~~i~p~~~~~~y~d~~~i~~~a~~~~~daI   81 (467)
T PRK12833          3 SRIRKVLVANR-GEIAVRIIRAARELGMRTVAACSDADRDSLAARMADEAVHIGPSHAAKSYLNPAAILAAARQCGADAI   81 (467)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHHcCCeEEEEECCCCCCChhHHhCCEEEecCCCCccccccCHHHHHHHHHHhCCCEE
Confidence            34689999997 999999999999999999988654322211111111112123      5556666666665  67888


Q ss_pred             EECCC
Q 015872          153 IDCAT  157 (399)
Q Consensus       153 i~~a~  157 (399)
                      +-..+
T Consensus        82 ~pg~g   86 (467)
T PRK12833         82 HPGYG   86 (467)
T ss_pred             EECCC
Confidence            86543

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.22  E-value=0.02  Score=57.04  Aligned_cols=100  Identities=22%  Similarity=0.242  Sum_probs=68.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC-------------C-------cH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-------------E-------TI  142 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-------------~-------~l  142 (399)
                      ..+|+|+|+ |.+|...+..+...|..|++++++.. ..+..+..+.+++..|..+.             +       .+
T Consensus       164 ~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~-rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~  241 (511)
T TIGR00561       164 PAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPE-VKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF  241 (511)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence            468999997 99999999999999999999998754 33344556788877775321             1       04


Q ss_pred             HHHhcCCCEEEECC---CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          143 PATLVGVHTVIDCA---TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       143 ~~~~~~~d~Vi~~a---~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      .+.++++|+||.++   |...+.       .-+...++.++...  .+|-+++.
T Consensus       242 ~e~~~~~DIVI~TalipG~~aP~-------Lit~emv~~MKpGs--vIVDlA~d  286 (511)
T TIGR00561       242 AAQAKEVDIIITTALIPGKPAPK-------LITEEMVDSMKAGS--VIVDLAAE  286 (511)
T ss_pred             HHHhCCCCEEEECcccCCCCCCe-------eehHHHHhhCCCCC--EEEEeeeC
Confidence            45567899999998   421211       12455666655543  47777753

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.22  E-value=0.012  Score=59.04  Aligned_cols=73  Identities=16%  Similarity=0.177  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----------ccC-CcEE-EEccCCCCCcHHHHhcCCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----------RDW-GATV-VNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----------~~~-~v~~-~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      |+|.|+|+ |.+|..++..|++.|++|++.+++++......          ... +... ..+.+.-.+++.++++++|+
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            57999986 99999999999999999999999754432110          000 0000 01112223457778899999


Q ss_pred             EEECCC
Q 015872          152 VIDCAT  157 (399)
Q Consensus       152 Vi~~a~  157 (399)
                      ||-+..
T Consensus        84 Vieavp   89 (495)
T PRK07531         84 IQESVP   89 (495)
T ss_pred             EEEcCc
Confidence            998875

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.21  E-value=0.034  Score=55.44  Aligned_cols=74  Identities=20%  Similarity=0.097  Sum_probs=55.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +|+|+|+ |..|...++.|.++|++|.+.++.......    .+...+++++.+.-.+.+.+...+.++|.||...|..
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~   79 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIP   79 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCC
Confidence            5899996 889999999999999999999987543322    2555688887765444444555677899999987743

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.21  E-value=0.0065  Score=57.08  Aligned_cols=74  Identities=15%  Similarity=0.249  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCC-cHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPE-TIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~-~l~~~~~~~d~Vi~~a~  157 (399)
                      +++||+.|+ ||+.+.++..|.+++ .+|++.+|...+.....+..+++.+..|+.|++ .+++..+..|.|+.+..
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP   77 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLP   77 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeecc
Confidence            467999996 999999999999875 788888887666666666677999999999988 89999999999999875

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.21  E-value=0.019  Score=54.65  Aligned_cols=94  Identities=16%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      .+|||+||+|-+|..+++.+...|. +|++++++.++. +.+.. .++..+ .|..+. ++.+.+     .++|+||++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~-~~~~~~lGa~~v-i~~~~~-~~~~~i~~~~~~gvd~vid~~  232 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC-QLLKSELGFDAA-INYKTD-NVAERLRELCPEGVDVYFDNV  232 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhcCCcEE-EECCCC-CHHHHHHHHCCCCceEEEECC
Confidence            6899999999999999998888998 799998874432 22322 455433 233332 232222     3699999998


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      |..           .....++.++..|  ++|.++..
T Consensus       233 g~~-----------~~~~~~~~l~~~G--~iv~~G~~  256 (345)
T cd08293         233 GGE-----------ISDTVISQMNENS--HIILCGQI  256 (345)
T ss_pred             CcH-----------HHHHHHHHhccCC--EEEEEeee
Confidence            721           1223445544443  78877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.20  E-value=0.0076  Score=56.73  Aligned_cols=73  Identities=18%  Similarity=0.350  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ...++|+|+|+ |.+|..+++.|...| .+|+++.|+.++........+...+     +.+++.+.+.++|+||.+.+..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~-----~~~~~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAV-----PLDELLELLNEADVVISATGAP  249 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEE-----eHHHHHHHHhcCCEEEECCCCC
Confidence            34688999997 999999999999876 7899999975443333333344322     2234667788899999998743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.20  E-value=0.008  Score=59.16  Aligned_cols=72  Identities=18%  Similarity=0.441  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |.+|..+++.|...|. +|++..|+...........+...+     +.+++.+.+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~-----~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAI-----PLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEe-----eHHHHHHHhccCCEEEECCCC
Confidence            45678999997 9999999999999997 799999875443322222232222     224466677899999999873

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.18  E-value=0.045  Score=51.10  Aligned_cols=86  Identities=17%  Similarity=0.140  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc---EEEEec--CCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVR--PRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~---V~~~~r--~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +++|.|.||||-+|+.+++.|.++...   +.++..  +..+.........+ .+.-|..|..    .++++|+||.++|
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~-~v~~~~~~~~----~~~~~Divf~~ag   75 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI-GVPEDAADEF----VFSDVDIVFFAAG   75 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc-cCcccccccc----ccccCCEEEEeCc
Confidence            368999999999999999999997532   333332  22221011111111 1111112211    2348999999997


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                      .           ..++.+...+.++|+
T Consensus        76 ~-----------~~s~~~~p~~~~~G~   91 (334)
T COG0136          76 G-----------SVSKEVEPKAAEAGC   91 (334)
T ss_pred             h-----------HHHHHHHHHHHHcCC
Confidence            3           235678888888885

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.18  E-value=0.01  Score=54.97  Aligned_cols=69  Identities=13%  Similarity=0.203  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC----CcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g----~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |+.|+|.|+| .|.+|..+++.|++.|    ++|++.+|+.++..+.+.. .+++..       ++..++.+++|+||.+
T Consensus         1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~-------~~~~e~~~~aDvVila   72 (279)
T PRK07679          1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT-------HNKKELLTDANILFLA   72 (279)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe-------CCHHHHHhcCCEEEEE
Confidence            3457899999 5999999999999998    8899988865433333222 244321       2345567889999998


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      ..
T Consensus        73 v~   74 (279)
T PRK07679         73 MK   74 (279)
T ss_pred             eC
Confidence            75

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.18  E-value=0.0094  Score=55.61  Aligned_cols=37  Identities=27%  Similarity=0.307  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      +.++|.|+|+ |.+|..++..|+..|++|++.+|+.+.
T Consensus         3 ~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530          3 AIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            3478999997 999999999999999999999997543

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.18  E-value=0.059  Score=51.33  Aligned_cols=92  Identities=17%  Similarity=0.251  Sum_probs=56.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCc---EEEEecCCC-CCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRAL-DEGYD---VRCLVRPRP-APADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~-~~g~~---V~~~~r~~~-~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|.|+||||-+|+.+++.|. ++++.   ++.+.-... .......  +.....-++.+.    ..+.++|+||.++|.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~--~~~~~v~~~~~~----~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG--GTTGTLQDAFDI----DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC--CCcceEEcCccc----ccccCCCEEEEcCCH
Confidence            479999999999999999999 55654   444443211 1111111  222223333332    245789999999872


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss  192 (399)
                                 ..++.+...+.++|.. .+|=-||
T Consensus        75 -----------~~s~~~~p~~~~aG~~~~VIDnSS   98 (366)
T TIGR01745        75 -----------DYTNEIYPKLRESGWQGYWIDAAS   98 (366)
T ss_pred             -----------HHHHHHHHHHHhCCCCeEEEECCh
Confidence                       3366788888888853 3443443

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.17  E-value=0.051  Score=50.57  Aligned_cols=93  Identities=10%  Similarity=-0.023  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEE---EEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVR---CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~---~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ..++|.| ||||-+|+.+++.|.++++.|-   ++........+.+.-.+-++..-++++.     .|+++|++|. +|.
T Consensus         2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~g~~~~V~~l~~~-----~f~~vDia~f-ag~   74 (322)
T PRK06901          2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFNNKAVEQIAPEEV-----EWADFNYVFF-AGK   74 (322)
T ss_pred             CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEECCEEEEEEECCcc-----CcccCCEEEE-cCH
Confidence            3468999 9999999999999999987543   3333211111222222333333344332     3578999999 762


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                                 ...+.....+.+.|+ .+|=-||.
T Consensus        75 -----------~~s~~~ap~a~~aG~-~VIDnSsa   97 (322)
T PRK06901         75 -----------MAQAEHLAQAAEAGC-IVIDLYGI   97 (322)
T ss_pred             -----------HHHHHHHHHHHHCCC-EEEECChH
Confidence                       335667777888887 45545543

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.17  E-value=0.014  Score=56.94  Aligned_cols=70  Identities=20%  Similarity=0.293  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a  156 (399)
                      .|+|+|+|+ |.+|..++..+.+.|++|++++.++......+   .-..+..|..|.+.+.++++  ++|.|+...
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AHRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            478999986 89999999999999999999998754332211   11356788888888888877  799998654

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.17  E-value=0.0075  Score=57.10  Aligned_cols=72  Identities=17%  Similarity=0.206  Sum_probs=48.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEE-------EccCCCCCcHHHHhcCCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------NADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~-------~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      |+|.|+|+ |.+|..++..|++.|++|.+++|++... +.+...+....       ...+.-..+..++++++|+||-+.
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQA-AEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV   79 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence            68999996 9999999999999999999999974332 11221111000       001112234666778999999987


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      .
T Consensus        80 ~   80 (325)
T PRK00094         80 P   80 (325)
T ss_pred             C
Confidence            6

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.17  E-value=0.051  Score=52.14  Aligned_cols=56  Identities=20%  Similarity=0.199  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .++|+|+|.+|.+|+.+++.|.+. |++|+++++..+.                   .....+.+.++|.||-|..
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~-------------------~~~~~~~v~~aDlVilavP   60 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG-------------------SLDPATLLQRADVLIFSAP   60 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc-------------------cCCHHHHhcCCCEEEEeCC
Confidence            468999999999999999999975 8999998874110                   1235567889999999976

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.15  E-value=0.037  Score=51.70  Aligned_cols=97  Identities=19%  Similarity=0.164  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCc---cccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPA---DFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~---~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++||.|.||+||.|..|++.|..+. .++...+.+.....   +..... +..-.....-|.+.+  ...++|+||-+..
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP   79 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP   79 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence            5789999999999999999999984 57666664421111   111111 110011111122222  3457999999875


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      .           .....++....+.|+ ++|=+|..
T Consensus        80 h-----------g~s~~~v~~l~~~g~-~VIDLSad  103 (349)
T COG0002          80 H-----------GVSAELVPELLEAGC-KVIDLSAD  103 (349)
T ss_pred             c-----------hhHHHHHHHHHhCCC-eEEECCcc
Confidence            1           224456666666677 48878764

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.14  E-value=0.031  Score=55.91  Aligned_cols=75  Identities=23%  Similarity=0.265  Sum_probs=53.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      ..+++|+|.|. |..|..+++.|.+.|++|.+.+++.....+.+...+++++.++-. .    +.+.++|.||...|..+
T Consensus        13 ~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~----~~~~~~d~vV~Spgi~~   86 (473)
T PRK00141         13 ELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-S----DQLDSFSLVVTSPGWRP   86 (473)
T ss_pred             ccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-h----hHhcCCCEEEeCCCCCC
Confidence            34578999995 999999999999999999999986443322234457777665321 1    23467899999888544


Q ss_pred             C
Q 015872          161 E  161 (399)
Q Consensus       161 ~  161 (399)
                      .
T Consensus        87 ~   87 (473)
T PRK00141         87 D   87 (473)
T ss_pred             C
Confidence            3

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.09  E-value=0.0072  Score=58.24  Aligned_cols=72  Identities=19%  Similarity=0.401  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|||+|| |-+|.-++++|.++| .+|+++.|..++..+.....+     +++...+.+.+.+..+|+||.+.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhhhCCEEEEecCC
Confidence            56789999998 999999999999999 788888887665544434444     4455556788889999999998774

>PLN00203 glutamyl-tRNA reductase

Probab=96.09  E-value=0.01  Score=59.55  Aligned_cols=76  Identities=16%  Similarity=0.348  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |.+|..+++.|...|. +|+++.|+..+........ ++.+...+   .+++.+++.++|+||.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~---~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP---LDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec---HhhHHHHHhcCCEEEEccCC
Confidence            45689999998 9999999999999996 6999999854433322221 22222222   24567788899999998764


Q ss_pred             CC
Q 015872          159 RP  160 (399)
Q Consensus       159 ~~  160 (399)
                      ..
T Consensus       340 ~~  341 (519)
T PLN00203        340 ET  341 (519)
T ss_pred             CC
Confidence            33

>PRK07411 hypothetical protein; Validated

Probab=96.07  E-value=0.049  Score=52.93  Aligned_cols=100  Identities=16%  Similarity=0.222  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------------------ccccc--C--CcEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------------------DFLRD--W--GATVVN  133 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------------------~~l~~--~--~v~~~~  133 (399)
                      ....+|+|+|+ |.+|..+++.|+..|. ++++++.+.-...                      +.+.+  .  .++.+.
T Consensus        36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~  114 (390)
T PRK07411         36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE  114 (390)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence            34568999997 8899999999999994 6666666421110                      00111  1  244455


Q ss_pred             ccCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ..++. +...+.+.++|+||.|..          |...-..+-++|.+.++ .+|+.+..
T Consensus       115 ~~~~~-~~~~~~~~~~D~Vvd~~d----------~~~~r~~ln~~~~~~~~-p~v~~~~~  162 (390)
T PRK07411        115 TRLSS-ENALDILAPYDVVVDGTD----------NFPTRYLVNDACVLLNK-PNVYGSIF  162 (390)
T ss_pred             cccCH-HhHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEEc
Confidence            55543 446677899999999964          23333446678888886 66766644

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.07  E-value=0.027  Score=54.16  Aligned_cols=67  Identities=15%  Similarity=0.161  Sum_probs=50.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .....++|.|+|. |.||+.+++.|..-|.+|.+.++.....             .+-....++.++++.+|+|+.....
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~-------------~~~~~~~~L~ell~~sDiI~lh~PL  177 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADR-------------GDEGDFRSLDELVQEADILTFHTPL  177 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCccccc-------------ccccccCCHHHHHhhCCEEEEeCCC
Confidence            3567899999996 9999999999999999999987532110             1111245688999999999866653


Q ss_pred             C
Q 015872          159 R  159 (399)
Q Consensus       159 ~  159 (399)
                      .
T Consensus       178 t  178 (378)
T PRK15438        178 F  178 (378)
T ss_pred             C
Confidence            3

>PRK07574 formate dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=52.93  Aligned_cols=69  Identities=16%  Similarity=0.200  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....|+|.|+|. |.||+.+++.|..-|.+|++.+|..... ......++       .-..++.++++.+|+|+.+..
T Consensus       189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~-------~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGL-------TYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCc-------eecCCHHHHhhcCCEEEEcCC
Confidence            456789999996 9999999999999999999999874221 11111122       123458889999999988876

>PRK06849 hypothetical protein; Provisional

Probab=96.05  E-value=0.039  Score=53.76  Aligned_cols=37  Identities=16%  Similarity=0.178  Sum_probs=33.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      ++|+|||||+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            3589999999999999999999999999999998743

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.04  E-value=0.0083  Score=51.57  Aligned_cols=70  Identities=19%  Similarity=0.215  Sum_probs=49.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ....++|.|+|. |.||+.+++.|..-|.+|++.+|...... .....++        ...++.++++.+|+|+.+....
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~-~~~~~~~--------~~~~l~ell~~aDiv~~~~plt  102 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE-GADEFGV--------EYVSLDELLAQADIVSLHLPLT  102 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH-HHHHTTE--------EESSHHHHHHH-SEEEE-SSSS
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh-hcccccc--------eeeehhhhcchhhhhhhhhccc
Confidence            556789999996 99999999999999999999999754322 0111111        2346888999999998887633

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.04  E-value=0.034  Score=46.65  Aligned_cols=56  Identities=14%  Similarity=0.258  Sum_probs=41.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +...|+|+|+|.++.+|..++..|.++|..|+......                      .++.+..+.+|+||-.+|
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------~~l~~~~~~ADIVVsa~G   88 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------KNLQEITRRADIVVSAVG   88 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------SSHHHHHTTSSEEEE-SS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------CcccceeeeccEEeeeec
Confidence            56679999999999999999999999999999877653                      235556667777777776

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.04  E-value=0.013  Score=54.73  Aligned_cols=66  Identities=21%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +|+|.|+|. |.+|..+++.|++.|++|.+.+|+..+.. .+...++.       -.+++.++++++|+||-+..
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~~~g~~-------~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVA-EVIAAGAE-------TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHH-HHHHCCCe-------ecCCHHHHHhcCCEEEEeCC
Confidence            368999985 99999999999999999999998754322 22222332       12346677889999999875

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.04  E-value=0.13  Score=47.29  Aligned_cols=90  Identities=21%  Similarity=0.265  Sum_probs=58.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHhc-----CCC-EEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLV-----GVH-TVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~-----~~d-~Vi~~a  156 (399)
                      .+|+|.|++|..|+.+++.+.+.+.++....-......+.- .-.+.   ..-+..++++.+++.     .+| ++|++.
T Consensus        12 i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~---~v~~~~~~dl~~~l~~~~~~~~~~VvIDFT   88 (286)
T PLN02775         12 IPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGV---EVRLVGPSEREAVLSSVKAEYPNLIVVDYT   88 (286)
T ss_pred             CeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceeccc---eeeeecCccHHHHHHHhhccCCCEEEEECC
Confidence            58999999999999999999998888877543222211100 00111   112222344555552     488 899985


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                      .           -.++...++.|.++|+. +|
T Consensus        89 ~-----------P~a~~~~~~~~~~~g~~-~V  108 (286)
T PLN02775         89 L-----------PDAVNDNAELYCKNGLP-FV  108 (286)
T ss_pred             C-----------hHHHHHHHHHHHHCCCC-EE
Confidence            4           25677899999999984 44

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.04  E-value=0.012  Score=54.59  Aligned_cols=36  Identities=36%  Similarity=0.457  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      .++|.|+|+ |.+|..++..|++.|++|++++++++.
T Consensus         3 ~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~   38 (282)
T PRK05808          3 IQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAA   38 (282)
T ss_pred             ccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHH
Confidence            468999997 999999999999999999999987544

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.04  E-value=0.016  Score=55.86  Aligned_cols=108  Identities=11%  Similarity=0.061  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-----cEEE--E--ecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-----DVRC--L--VRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-----~V~~--~--~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +-||.|+|++|.+|.+++-.|+..|.     +|.+  +  +++.+.....   +...-.... .++.=...-.+.++++|
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~~~y~~~kdaD  122 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGIDPYEVFEDAD  122 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEecCCHHHhCCCC
Confidence            45899999999999999999998863     2333  3  5543332111   100000000 01100011246789999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC-Cc-EEEEec
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~S  191 (399)
                      +||.+||..     ...+....|....+.+....+++. .. ++|.+|
T Consensus       123 IVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       123 WALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            999999932     223344578888888999998854 33 556566

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.03  E-value=0.017  Score=54.16  Aligned_cols=71  Identities=20%  Similarity=0.245  Sum_probs=46.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccC----CCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL----SKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl----~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|+|+|+ |.+|..++..|.+.|++|++++|+.+. .+.+...++..-.++.    .-.++..++ +.+|+||-+.-
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k   75 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAH-LDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVK   75 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHH-HHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEecc
Confidence            47999997 999999999999999999999996433 2223222332201111    111233333 78999998865

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.01  E-value=0.036  Score=45.39  Aligned_cols=59  Identities=15%  Similarity=0.185  Sum_probs=49.1

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .+...++|+|.|.+.-+|..++..|.++|.+|....++..                      ++.+.++.+|+||...|.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg~   81 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSPK   81 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCC
Confidence            3567899999999999999999999999999998876421                      366678889999998874


Q ss_pred             C
Q 015872          159 R  159 (399)
Q Consensus       159 ~  159 (399)
                      .
T Consensus        82 ~   82 (140)
T cd05212          82 P   82 (140)
T ss_pred             C
Confidence            3

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.01  E-value=0.023  Score=56.46  Aligned_cols=108  Identities=14%  Similarity=0.053  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcccccc-------CCcEEE----Ec-cCCCCCcHHHHhcC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRD-------WGATVV----NA-DLSKPETIPATLVG  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~-------~~v~~~----~~-Dl~d~~~l~~~~~~  148 (399)
                      +|+|.|+|. |++|..++-.|++.|  ++|++++.+.++.. .+..       .+.+-+    .+ .+.-..++.+++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~-~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRID-AWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHH-HHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            468999975 999999999999984  88999998754322 1111       111100    01 12222345667889


Q ss_pred             CCEEEECCCCCCC-C---cchhccHHHHHHHHHHHHHc-CCcEEEEecc
Q 015872          149 VHTVIDCATGRPE-E---PIKKVDWEGKVALIQCAKAM-GIQKYVFYSI  192 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-~---~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss  192 (399)
                      +|++|-|.+.-.. +   .-...|+......++...+. .-..+|.+.|
T Consensus        79 advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~S  127 (473)
T PLN02353         79 ADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKS  127 (473)
T ss_pred             CCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeC
Confidence            9999999872211 1   01234555555555444332 2224554444

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.01  E-value=0.01  Score=47.76  Aligned_cols=32  Identities=25%  Similarity=0.401  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r  115 (399)
                      .++|-|+|+ |.+|.+|.+.|.+.||+|..+..
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s   41 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS   41 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence            478999998 99999999999999999998864

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02712 arogenate dehydrogenase

Probab=96.01  E-value=0.04  Score=57.21  Aligned_cols=36  Identities=19%  Similarity=0.386  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ..+++|.|+| .|.+|..+++.|.+.|++|.+++|+.
T Consensus        50 ~~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~   85 (667)
T PLN02712         50 TTQLKIAIIG-FGNYGQFLAKTLISQGHTVLAHSRSD   85 (667)
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3457899999 59999999999999999999999873

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.01  E-value=0.018  Score=56.36  Aligned_cols=103  Identities=12%  Similarity=0.074  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC---C----CcEEEEecCC-CCCcc----cccc------CCcEEEEccCCCCCcHHH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE---G----YDVRCLVRPR-PAPAD----FLRD------WGATVVNADLSKPETIPA  144 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~---g----~~V~~~~r~~-~~~~~----~l~~------~~v~~~~~Dl~d~~~l~~  144 (399)
                      +-+|+||||+|.||.+|+-.+++-   |    ..+++++... .+..+    .+..      .++.+. .      ...+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCHH
Confidence            457999999999999999998863   3    2355555521 11110    0000      012222 1      2346


Q ss_pred             HhcCCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCC--cEEEEecc
Q 015872          145 TLVGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSI  192 (399)
Q Consensus       145 ~~~~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss  192 (399)
                      +++++|+||-++|..     ...+..+.|..-.+.+..+..+++.  .+++.+.|
T Consensus       196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            899999999999932     2233446788888888999888875  46665554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.01  E-value=0.027  Score=52.19  Aligned_cols=66  Identities=20%  Similarity=0.183  Sum_probs=45.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|.|+| .|.+|..++..|.+.|++|.+.+|+.+.... ....+..    +.. .... +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~-a~~~g~~----~~~-~~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCER-AIERGLV----DEA-STDL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHCCCc----ccc-cCCH-hHhcCCCEEEEcCC
Confidence            4799998 5999999999999999999999997443222 2222221    111 1112 35688999999975

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.00  E-value=0.062  Score=47.89  Aligned_cols=191  Identities=15%  Similarity=0.102  Sum_probs=106.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      +++|+|.|||+= +..|++.|...+..+++.+-. ....+.....+. .+.+-..+.+.+.+.++  ++|.||+...  |
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t-~~g~~l~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llIDATH--P   76 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLT-GYGAKLAEQIGP-VRVGGFLGAEGLAAFLREEGIDLLIDATH--P   76 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhccCccEEEEEcc-cccccchhccCC-eeecCcCCHHHHHHHHHHcCCCEEEECCC--h
Confidence            468999999886 899999999998555555432 211222222222 56666777888988886  7999999754  2


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhh
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVP  240 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~  240 (399)
                      +.      ...+.|.+++|++.|+..+.|-=-.-........+..+-.++-+.+.+.+ +-+.+-.    |.   +.+  
T Consensus        77 yA------a~iS~Na~~aake~gipy~r~eRP~~~~~gd~~~~V~d~~ea~~~~~~~~-~rVflt~----G~---~~l--  140 (257)
T COG2099          77 YA------ARISQNAARAAKETGIPYLRLERPPWAPNGDNWIEVADIEEAAEAAKQLG-RRVFLTT----GR---QNL--  140 (257)
T ss_pred             HH------HHHHHHHHHHHHHhCCcEEEEECCccccCCCceEEecCHHHHHHHHhccC-CcEEEec----Cc---cch--
Confidence            21      25688999999999996555432111111122222223233333444443 1111111    10   000  


Q ss_pred             hccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHH
Q 015872          241 ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCER  301 (399)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~  301 (399)
                           ..|....+...=++-+-|..+.+..+.+......+++-.-||  ++...=..++.+
T Consensus       141 -----~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GP--fs~~~n~all~q  194 (257)
T COG2099         141 -----AHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGP--FSEEDNKALLEQ  194 (257)
T ss_pred             -----HHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCC--cChHHHHHHHHH
Confidence                 111111122112344456677777787776666678777765  665555555544

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.061  Score=53.37  Aligned_cols=74  Identities=16%  Similarity=0.127  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccccc--CCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ..++|+|+|+ |..|..+++.|.++|++|.+.+...... ...+..  .++.++.+...+     ..+.++|.||...|.
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi   77 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGI   77 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCC
Confidence            4578999997 6899999999999999999998764432 222332  366666654321     234689999999885


Q ss_pred             CCC
Q 015872          159 RPE  161 (399)
Q Consensus       159 ~~~  161 (399)
                      .+.
T Consensus        78 ~~~   80 (445)
T PRK04308         78 SER   80 (445)
T ss_pred             CCC
Confidence            443

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.99  E-value=0.03  Score=53.33  Aligned_cols=98  Identities=17%  Similarity=0.222  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccc-cccCCcEE----------EE-ccCCCCCcHHHHhcCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADF-LRDWGATV----------VN-ADLSKPETIPATLVGV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~-l~~~~v~~----------~~-~Dl~d~~~l~~~~~~~  149 (399)
                      +.||.|.|+ |.+|+.+++.+.+. +.+|.++.......... ....+...          +. .++.-.+.+.+.+.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            358999999 99999999988865 68888877532211111 11011110          00 0111112355566789


Q ss_pred             CEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       150 d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      |+||.|.+.           ......++.+.++| +++|+.++.
T Consensus        80 DVVIdaT~~-----------~~~~e~a~~~~~aG-k~VI~~~~~  111 (341)
T PRK04207         80 DIVVDATPG-----------GVGAKNKELYEKAG-VKAIFQGGE  111 (341)
T ss_pred             CEEEECCCc-----------hhhHHHHHHHHHCC-CEEEEcCCC
Confidence            999999863           22456777888888 577766654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	399
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		1e-07
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		1e-07
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		3e-07
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		3e-07
2zcu_A	286	Crystal Structure Of A New Type Of Nadph-Dependent		5e-07
2vrb_A	287	Crystal Structure Of The Citrobacter Sp. Triphenylm		7e-06
2jl1_A	287	Structural Insight Into Bioremediation Of Triphenyl		7e-06
3e5m_A	299	Crystal Structure Of The Hscarg Y81a Mutant Length		8e-06
2exx_A	306	Crystal Structure Of Hscarg From Homo Sapiens In Co		9e-06
2wmd_A	299	Crystal Structure Of Nmra-Like Family Domain Contai		1e-05
2vrc_A	287	Crystal Structure Of The Citrobacter Sp. Triphenylm		4e-05
3dxf_A	299	Crystal Structure Of The Hscarg R37a Mutant Length		5e-05
2vrc_D	287	Crystal Structure Of The Citrobacter Sp. Triphenylm		8e-05
2a35_A	215	1.5 A Crystal Structure Of A Protein Of Unknown Fun		5e-04
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		6e-04

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--------DFLRDWGATVVNAD 135
           + IL++GATG +GR + + +LD G+    LVR   A +        +  +  GA +V+  
Sbjct: 5   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64
Query: 136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
           +    ++   +  V  VI          +  +  E +V +I+  K +G  K  F S    
Sbjct: 65  IDDHASLVEAVKNVDVVIST--------VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 116
Query: 196 D------KHPEVPLMEIKYCTEQFLQDSGLPHVIIR---LCG-FMQGL--IGQYAVPILE 243
           D        P   + E+K    + ++  G+P+  +      G F++ L   G  A P   
Sbjct: 117 DVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP--R 174
Query: 244 EKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERL 302
           +K V   D   R+ ++  +DI   T  A+ + +   +TL    P    +  E++ L E+ 
Sbjct: 175 DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK 234
Query: 303 AGQDANVTMVP 313
             +      VP
Sbjct: 235 IDKTLEKAYVP 245

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---------DFLRDWGATVVNA 134
             IL++G TG +GR IV  ++  G     LVR     A         D  +  G  ++  
Sbjct: 3   NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG 62
Query: 135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH- 193
           D++  ET+   +  V  VI CA GR       +  E +V +I+  K  G  K  F S   
Sbjct: 63  DINDHETLVKAIKQVDIVI-CAAGR-------LLIEDQVKIIKAIKEAGNVKKFFPSEFG 114
Query: 194 -NCDKHPEVP----LMEIKYCTEQFLQDSGLPHVIIRLC------GFMQGLIGQYAVPIL 242
            + D+H  V     + E K    + ++  G+P+    LC       F++ L    A    
Sbjct: 115 LDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTY--LCCHAFTGYFLRNLAQLDATDPP 172
Query: 243 EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCER 301
            +K V   D   + AY+   D+   T  A  +     + +    P+ + TQ EVI L E+
Sbjct: 173 RDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEK 232
Query: 302 LAGQDANVTMV 312
             G+    T V
Sbjct: 233 KIGKTLEKTYV 243

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLRDW-GAT----VVNADLS 137
           + V G TG LG  I++  L+ GY V   +R  P       FL +  GA+      NADLS
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLS 63
Query: 138 KPETIPATLVG----VHTV--IDCATGRPEEPIKKVDWEGKVALIQ-CAKAMGIQKYVFY 190
            P++  A + G     HT   ID A   PEE + K   +G + +++ C  +  ++++++ 
Sbjct: 64  NPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYT 123
Query: 191 S 191
           S
Sbjct: 124 S 124

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 40/240 (16%)
Query: 85  SILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
           ++LV GA+G  G QIV + L EG D    + LVR          +  A V   D++  ++
Sbjct: 6   TVLVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62
Query: 142 IPATLVGVHTVIDCAT--------------GRPE------EPIKKVDWEGKVALIQCAKA 181
           I     G+  ++   +              GRPE      +  ++VDW G+   I  AK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122
Query: 182 MGIQKYVFYSIHNCDKHPEVPLMEI--------KYCTEQFLQDSGLPHVIIRLCGFMQGL 233
            G+ K++         +P+ PL ++        K   EQ+L DSG P+ IIR  G +   
Sbjct: 123 AGV-KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 181
Query: 234 IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF-SGPRAWTT 292
            G   + + ++  +  TD  T    +   D+A +   AL  E+   +     S P   +T
Sbjct: 182 GGVRELLVGKDDELLQTDTKT----VPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 237

>pdb|2ZCU|A Chain A, Crystal Structure Of A New Type Of Nadph-Dependent Quinone Oxidoreductase (Qor2) From Escherichia Coli Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 86  ILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           I + GATG LG  ++   +       +  +VR  PA A  L   G TV  AD      + 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALAAQGITVRQADYGDEAALT 60
Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           + L GV  ++  ++    E  ++      V  I  AKA G++   + S+ + D  P + L
Sbjct: 61  SALQGVEKLLLISS---SEVGQRAPQHRNV--INAAKAAGVKFIAYTSLLHADTSP-LGL 114
Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
            +    TE+ L DSG+ + ++R   + +  +   A   LE     G     +IA     D
Sbjct: 115 ADEHIETEKMLADSGIVYTLLRNGWYSENYLAS-APAALEHGVFIGAAGDGKIASATRAD 173
Query: 264 IARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQL 323
            A      +      G+    +G  AWT  ++     + +G+   VT   +S   F   L
Sbjct: 174 YAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGK--QVTYQNLSEADFAAAL 231
Query: 324 TRFFEWTNDVADRLAFSEVLTS 345
            +     + +AD LA S+V  S
Sbjct: 232 -KSVGLPDGLADMLADSDVGAS 252

>pdb|2VRB|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane Reductase Complexed With Nadp(H) Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 9/233 (3%)
Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L  +   TE  ++ + +P+  +R   +    + +      E  ++        +  +   
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN 176
Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS 315
           ++A      L  E    +T      + WT  E+  +   ++G+   V   PVS
Sbjct: 177 ELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK--VVHQPVS 227

>pdb|2JL1|A Chain A, Structural Insight Into Bioremediation Of Triphenylmethane Dyes By Citrobacter Sp. Triphenylmethane Reductase Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 9/233 (3%)
Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L  +   TE  ++ + +P+  +R   +    + +      E  ++        +  +   
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN 176
Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS 315
           ++A      L  E    +T      + WT  E+  +   ++G+   V   PVS
Sbjct: 177 ELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK--VVHQPVS 227

>pdb|3E5M|A Chain A, Crystal Structure Of The Hscarg Y81a Mutant Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 31/273 (11%)
Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ++V G TG  G  + R  L++G + VR + R PR   A  LR  GA VV  D      + 
Sbjct: 7   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 66
Query: 144 ATLVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP 199
             L G +              E+ +K    +GK+ L   A+ +G+   V+  + N  K  
Sbjct: 67  LALNGAYATFIVTNAWESCSQEQEVK----QGKL-LADLARRLGLHYVVYSGLENIKKLT 121
Query: 200 EVPL----MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTR 255
              L     + K   E++ +D G+P   +RL  + + L+  +    L +K+  G   L  
Sbjct: 122 AGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHF----LPQKAPDGKSYLLS 177
Query: 256 IAY----MDTQDIARLTFVALR----NEKINGRTLTFSGPR--AWTTQEVITLCERLAGQ 305
           +      MD   ++ L  V L      EK  G+ +  S  R  A     ++T   R    
Sbjct: 178 LPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVH 237
Query: 306 DANVTMVPVSVLRF--TRQLTRFFEWTNDVADR 336
           DA +T      L F   R L   F +     DR
Sbjct: 238 DAKMTPEDYEKLGFPGARDLANMFRFYALRPDR 270

>pdb|2EXX|A Chain A, Crystal Structure Of Hscarg From Homo Sapiens In Complex With Nadp Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 112/284 (39%), Gaps = 37/284 (13%)
Query: 78  GTPVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNAD 135
           G  V    ++V G TG  G  + R  L++G + VR + R PR   A  LR  GA VV  D
Sbjct: 6   GLMVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGD 65
Query: 136 LSKPETIPATLVGVHTVI-------DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV 188
                 +   L G +           C+    E+ +K    +GK+ L   A+ +G+   V
Sbjct: 66  QDDQVIMELALNGAYATFIVTNYWESCSQ---EQEVK----QGKL-LADLARRLGLHYVV 117
Query: 189 FYSIHNCDKHPEVPL----MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEE 244
           +  + N  K     L     + K   E++ +D G+P   +RL  + + L+  +    L +
Sbjct: 118 YSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHF----LPQ 173
Query: 245 KSVWGTDALTRIAY----MDTQDIARLTFVALR----NEKINGRTLTFSGPR--AWTTQE 294
           K+  G   L  +      MD   ++ L  V L      EK  G+ +  S  R  A     
Sbjct: 174 KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAA 233
Query: 295 VITLCERLAGQDANVTMVPVSVLRF--TRQLTRFFEWTNDVADR 336
           ++T   R    DA +T      L F   R L   F +     DR
Sbjct: 234 LLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDR 277

>pdb|2WMD|A Chain A, Crystal Structure Of Nmra-Like Family Domain Containing Protein 1 In Complex With Nadp And 2-(4-Chloro- Phenylamino)-Nicotinic Acid Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 110/276 (39%), Gaps = 37/276 (13%)
Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ++V G TG  G  + R  L++G + VR + R PR   A  LR  GA VV  D      + 
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67
Query: 144 ATLVGVHTVI-------DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
             L G +           C+    E+ +K    +GK+ L   A+ +G+   V+  + N  
Sbjct: 68  LALNGAYATFIVTNYWESCSQ---EQEVK----QGKL-LADLARRLGLHYVVYSGLENIK 119
Query: 197 KHPEVPL----MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDA 252
           K     L     + K   E++ +D G+P   +RL  + + L+  +    L +K+  G   
Sbjct: 120 KLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHF----LPQKAPDGKSY 175
Query: 253 LTRIAY----MDTQDIARLTFVALR----NEKINGRTLTFSGPR--AWTTQEVITLCERL 302
           L  +      MD   ++ L  V L      EK  G+ +  S  R  A     ++T   R 
Sbjct: 176 LLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK 235
Query: 303 AGQDANVTMVPVSVLRF--TRQLTRFFEWTNDVADR 336
              DA +T      L F   R L   F +     DR
Sbjct: 236 VVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDR 271

>pdb|2VRC|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane Reductase Complexed With Nadp(h) Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 9/233 (3%)
Query: 85  SILVVGATGTLGRQIVRR--ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++   A      +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLXAAVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L  +   TE  ++ + +P+  +R   +    + +      E  ++        +  +   
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN 176
Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS 315
           ++A      L  E    +T      + WT  E+  +   ++G+   V   PVS
Sbjct: 177 ELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK--VVHQPVS 227

>pdb|3DXF|A Chain A, Crystal Structure Of The Hscarg R37a Mutant Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 37/276 (13%)
Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIP 143
           ++V G TG  G  + R  L++G + VR +   PR   A  LR  GA VV  D      + 
Sbjct: 7   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTANPRKKAAKELRLQGAEVVQGDQDDQVIME 66
Query: 144 ATLVGVHTVI-------DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
             L G +           C+    E+ +K    +GK+ L   A+ +G+   V+  + N  
Sbjct: 67  LALNGAYATFIVTNYWESCSQ---EQEVK----QGKL-LADLARRLGLHYVVYSGLENIK 118
Query: 197 KHPEVPL----MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDA 252
           K     L     + K   E++ +D G+P   +RL  + + L+  +    L +K+  G   
Sbjct: 119 KLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHF----LPQKAPDGKSY 174
Query: 253 LTRIAY----MDTQDIARLTFVALR----NEKINGRTLTFSGPR--AWTTQEVITLCERL 302
           L  +      MD   ++ L  V L      EK  G+ +  S  R  A     ++T   R 
Sbjct: 175 LLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK 234
Query: 303 AGQDANVTMVPVSVLRF--TRQLTRFFEWTNDVADR 336
              DA +T      L F   R L   F +     DR
Sbjct: 235 VVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDR 270

>pdb|2VRC|D Chain D, Crystal Structure Of The Citrobacter Sp. Triphenylmethane Reductase Complexed With Nadp(h) Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/233 (19%), Positives = 94/233 (40%), Gaps = 9/233 (3%)
Query: 85  SILVVGATGTLGRQIVRR--ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++   A      +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLXAAVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L  +   TE   + + +P+  +R   +    + +      E  ++        +  +   
Sbjct: 117 LAHVHLATEYATRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN 176
Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS 315
           ++A      L  E    +T      + WT  E+  +   ++G+   V   PVS
Sbjct: 177 ELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK--VVHQPVS 227

>pdb|2A35|A Chain A, 1.5 A Crystal Structure Of A Protein Of Unknown Function Pa4017 From Pseudomonas Aeruginosa Pao1, Possible Epimerase Length = 215

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R     + N      E +
Sbjct: 5   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR-----LDNPVGPLAELL 59
Query: 143 PATLVGVHTVIDC-----ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
           P     + T   C          EE  + VD++  +A+ + A  MG + Y+  S    D 
Sbjct: 60  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119
Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVII 224
              +    +K   EQ LQ+ G P + I
Sbjct: 120 KSSIFYNRVKGELEQALQEQGWPQLTI 146

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 40/266 (15%)
Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP-----RPAPADF---LRDWGATVVNADLS 137
           I++ G TG +G+ +VR +L   +      RP      P+        R  G T++  ++ 
Sbjct: 7   IIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEME 66
Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
           + E + + L  V  VI         P   +    ++ +I   KA G  K    S   C++
Sbjct: 67  EHEKMVSVLKQVDIVISAL------PFPMIS--SQIHIINAIKAAGNIKRFLPSDFGCEE 118
Query: 198 HPEVPL------MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKS----- 246
               PL      +E K    + ++ + LP+  +    F     G Y V  L   S     
Sbjct: 119 DRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCF-----GAYFVNYLLHPSPHPNR 173
Query: 247 -----VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCE 300
                ++GT   T+      +DIA+ T     + +   R + +  P+   +Q E+I+L E
Sbjct: 174 NDDIVIYGTGE-TKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWE 232
Query: 301 RLAGQD-ANVTMVPVSVLRFTRQLTR 325
             +G     V M    ++R +++L +
Sbjct: 233 AKSGLSFKKVHMPDEQLVRLSQELPQ 258

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-63
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	5e-63
1xq6_A	253	Unknown protein; structural genomics, protein stru	7e-57
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-56
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-53
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-53
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-52
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-52
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	7e-50
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-49
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-48
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-41
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-40
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-38
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-33
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-32
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-24
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-23
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-23
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-20
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-18
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-17
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-13
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-12
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-11
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-09
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-08
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-06
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-06
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	4e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-05
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	3e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-05
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	7e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	8e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-04
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-04
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-04
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	5e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	6e-04

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  204 bits (520), Expect = 3e-63
 Identities = 62/320 (19%), Positives = 121/320 (37%), Gaps = 41/320 (12%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--------LRDWGATVVNA 134
            + IL++GATG +GR + + +LD G+    LVR   A ++          +  GA +V+ 
Sbjct: 4   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 63

Query: 135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
            +    ++   +  V  VI             +  E +V +I+  K +G  K  F S   
Sbjct: 64  SIDDHASLVEAVKNVDVVISTVGS--------LQIESQVNIIKAIKEVGTVKRFFPSEFG 115

Query: 195 CDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ---GLIGQYAVPILEEK 245
            D        P   + E+K    + ++  G+P+  +    F       + Q  +      
Sbjct: 116 NDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRD 175

Query: 246 SVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERLA 303
            V    D   R+ ++  +DI   T  A+ + +   +TL    P    +  E++ L E+  
Sbjct: 176 KVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235

Query: 304 GQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVD 363
            +      VP   +      T F      ++  ++ S  +  D       +      GV+
Sbjct: 236 DKTLEKAYVPEEEVLKLIADTPFPAN---ISIAISHSIFVKGDQT-----NFEIGPAGVE 287

Query: 364 AKDI------ITLEKYLQDY 377
           A  +       T+++YL ++
Sbjct: 288 ASQLYPDVKYTTVDEYLSNF 307

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  203 bits (519), Expect = 5e-63
 Identities = 67/321 (20%), Positives = 119/321 (37%), Gaps = 42/321 (13%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---------DFLRDWGATVVN 133
              IL++G TG +GR IV  ++  G     LVR     A         D  +  G  ++ 
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61

Query: 134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH 193
            D++  ET+   +  V  VI  A          +  E +V +I+  K  G  K  F S  
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGR--------LLIEDQVKIIKAIKEAGNVKKFFPSEF 113

Query: 194 NCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ----GLIGQYAVPILE 243
             D        P   + E K    + ++  G+P+  +    F       L    A     
Sbjct: 114 GLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPR 173

Query: 244 EKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCERL 302
           +K V   D   + AY+   D+   T  A  +     + +    P+ + TQ EVI L E+ 
Sbjct: 174 DKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKK 233

Query: 303 AGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGV 362
            G+    T V    +    +  +   + ++    L  S+ +  D V+ +  ++      +
Sbjct: 234 IGKTLEKTYVSEEQV---LKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAK-----DI 285

Query: 363 DAKDI------ITLEKYLQDY 377
           +A +        T ++YL  +
Sbjct: 286 EASEAYPDVTYTTADEYLNQF 306

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  186 bits (473), Expect = 7e-57
 Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 35/253 (13%)

Query: 84  TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
            ++LV GA+G  G+ + ++  +    +  + LVR             A V   D++  ++
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADS 62

Query: 142 IPATLVGVHTVIDCATGRPE--------------------EPIKKVDWEGKVALIQCAKA 181
           I     G+  ++   +  P+                    +  ++VDW G+   I  AK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 182 MGIQKYVFYSIHNCDK-------HPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLI 234
            G++  V                     ++  K   EQ+L DSG P+ IIR  G +    
Sbjct: 123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG 182

Query: 235 GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE 294
           G   + + ++  +      T    +   D+A +   AL  E+   +          T+  
Sbjct: 183 GVRELLVGKDDELLQ----TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTP 238

Query: 295 VITLCERLAGQDA 307
                   +   +
Sbjct: 239 TKDFKALFSQVTS 251

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  186 bits (473), Expect = 4e-56
 Identities = 55/323 (17%), Positives = 119/323 (36%), Gaps = 40/323 (12%)

Query: 82  RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-------RPAPADFLRDWGATVVNA 134
           + + +L+VG TG +G++IV  ++  G+    L RP       +     + +  GA ++ A
Sbjct: 3   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 62

Query: 135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS--- 191
            L   + +   L  V  VI    G             ++ L++  K  G  K    S   
Sbjct: 63  SLDDHQRLVDALKQVDVVISALAGGVLSH----HILEQLKLVEAIKEAGNIKRFLPSEFG 118

Query: 192 ----IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ---GLIGQ---YAVPI 241
               I      P       K    + ++ + +P+  +    F     G + Q   + +P 
Sbjct: 119 MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP 178

Query: 242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCE 300
            ++  ++G D   +  ++D  D+   T  ++ + +   +T+    P    + +EVI + E
Sbjct: 179 RDKVLIYG-DGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWE 237

Query: 301 RLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL 360
           RL+ Q+ +   +         +   + E    +     +      D       +      
Sbjct: 238 RLSEQNLDKIYISSQDFLADMKDKSYEEK---IVRCHLYQIFFRGDLY-----NFEIGPN 289

Query: 361 GVDAKDI------ITLEKYLQDY 377
            ++A  +      +T++ YL+ Y
Sbjct: 290 AIEATKLYPEVKYVTMDSYLERY 312

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score =  178 bits (453), Expect = 3e-53
 Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 17/266 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ++V G TG  G  + R  L++G + VR + R PR   A  LR  GA VV  D      + 
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE--- 200
             L G +              ++   +GK  L   A+ +G+   V+  + N  K      
Sbjct: 68  LALNGAYATFIVTNYWESCSQEQEVKQGK-LLADLARRLGLHYVVYSGLENIKKLTAGRL 126

Query: 201 -VPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAL---TRI 256
                + K   E++ +D G+P   +RL  + + L+  +      +   +          +
Sbjct: 127 AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPM 186

Query: 257 AYMDTQDIARLTFVALRN-EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVS 315
             M   D+  +    L+  EK  G+ +  S     T +E   L  +   +  +   +   
Sbjct: 187 DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC-RHTAEEYAALLTKHTRKVVHDAKMTPE 245

Query: 316 VLR-----FTRQLTRFFEWTNDVADR 336
                     R L   F +     DR
Sbjct: 246 DYEKLGFPGARDLANMFRFYALRPDR 271

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  174 bits (444), Expect = 4e-53
 Identities = 46/210 (21%), Positives = 76/210 (36%), Gaps = 17/210 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GATG  G   + +A+  GY+V  LVR   +         A VV  D+ +   +  T
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----IHNCDKHPEV 201
           + G   VI     R +     V  EG   ++   KA G+ K V  +    + +  K P  
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR 124

Query: 202 --PLMEIKYCTEQFLQDSGLPHVIIRLCGFMQG-LIGQYAVPILEEKSVWGTDALTRIAY 258
              + +      + L++SGL +V +         L G Y V           D       
Sbjct: 125 LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTV---------TLDGRGPSRV 175

Query: 259 MDTQDIARLTFVALRNEKINGRTLTFSGPR 288
           +   D+       L  ++ +G +   S   
Sbjct: 176 ISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  175 bits (446), Expect = 4e-52
 Identities = 57/316 (18%), Positives = 107/316 (33%), Gaps = 35/316 (11%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP---RPAPADFLRDWGATVVNADLSKP 139
            + IL+ G TG +G  +V+ +L  G+      RP   +    D  +  GA +V  +L + 
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH 70

Query: 140 ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--- 196
           E +   +  V  VI                  +  +++  K  G  K    S    +   
Sbjct: 71  EKLVELMKKVDVVISALAFPQI--------LDQFKILEAIKVAGNIKRFLPSDFGVEEDR 122

Query: 197 ---KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV--WGTD 251
                P   L+E K    + ++++ +P+  +    F    I     P   +  +  +G  
Sbjct: 123 INALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYG-T 181

Query: 252 ALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCERLAGQDANVT 310
              + A    QDI   T     + +   R + +       TQ E+I+  E+  G+     
Sbjct: 182 GEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKI 241

Query: 311 MVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDI--- 367
            VP   +    +     E          F +  T        MS  F    V+A  +   
Sbjct: 242 HVPEEEIVALTKELPEPENIPIAILHCLFIDGAT--------MSYDFKENDVEASTLYPE 293

Query: 368 ---ITLEKYLQDYFTN 380
               T+++ L  +  +
Sbjct: 294 LKFTTIDELLDIFVHD 309

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  172 bits (439), Expect = 4e-52
 Identities = 42/227 (18%), Positives = 84/227 (37%), Gaps = 24/227 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT-VVNADLSKPETIPA 144
           +LVVGA G + R ++    ++G++   +VR        LR+ GA+ +V A+L   E    
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPELRERGASDIVVANL--EEDFSH 80

Query: 145 TLVGVHTVIDCATGRPE---EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV 201
               +  V+  A   P    +    +D  G +  IQ A+  GI++++  S        + 
Sbjct: 81  AFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG 140

Query: 202 PL-----MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRI 256
           P+     +  K   +  L+ S L + I+R                     +  +      
Sbjct: 141 PMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRS------ 194

Query: 257 AYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLA 303
             +   D+A++    +  +   G+T             +  + E+L 
Sbjct: 195 --ITRHDVAKVIAELVDQQHTIGKTFEVLNG----DTPIAKVVEQLG 235

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  170 bits (433), Expect = 7e-50
 Identities = 60/352 (17%), Positives = 117/352 (33%), Gaps = 43/352 (12%)

Query: 74  NMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP------APADFLRDW 127
            +SP  P     +L+ GATG +G+ +   +LD       L RP P           L D 
Sbjct: 2   TVSP-VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK 60

Query: 128 GATVVNADLSKPETIPATLVG--VHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ 185
           GA +V   +++ E +   L    +  V+    G             ++AL++  KA+G  
Sbjct: 61  GAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESI--------LDQIALVKAMKAVGTI 112

Query: 186 KYVFYSIHNCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYA- 238
           K    S    D +      P + +   K    Q +++SG+P   I               
Sbjct: 113 KRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH 172

Query: 239 ----VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQ 293
               +P  +   ++G D   +  ++   DI + T   + + +   +++ F          
Sbjct: 173 PSEVLPPTDFFQIYG-DGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNIN 231

Query: 294 EVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM 353
           E+ ++ E+  G+      V    L          +          F +       FS+  
Sbjct: 232 ELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQ--VNFSIDG 289

Query: 354 SETFDLLGVDAKDI------ITLEKYLQDYFTNILKKLKDLKAQSKQADFYI 399
            E      V+   +       T+E+   +Y   + +K     +        +
Sbjct: 290 PE-----DVEVTTLYPEDSFRTVEECFGEYIVKMEEKQPTADSAIANTGPVV 336

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score =  167 bits (426), Expect = 2e-49
 Identities = 44/244 (18%), Positives = 93/244 (38%), Gaps = 9/244 (3%)

Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +          +++ A+  G++   +      ++   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLL---IVQHANVVKAARDAGVKHIAYTGYAFAEESI-IP 116

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
           L  +   TE  ++ + +P+  +R   +    + +      E  ++        +  +   
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN 176

Query: 263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ 322
           ++A      L  E    +T      + WT  E+  +   ++G+   V   PVS       
Sbjct: 177 ELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK--VVHQPVSFEEEKNF 234

Query: 323 LTRF 326
           L   
Sbjct: 235 LVNA 238

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  166 bits (422), Expect = 1e-48
 Identities = 53/329 (16%), Positives = 109/329 (33%), Gaps = 43/329 (13%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP--------RPAPADFLRDWGATVVNAD 135
             I++ G TG +G+ +VR +L   +      RP             +  R  G T++  +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
           + + E + + L  V  VI                  ++ +I   KA G  K    S   C
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPFP--------MISSQIHIINAIKAAGNIKRFLPSDFGC 116

Query: 196 DKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIG---QYAVPILEEKS 246
           ++       P   ++E K    + ++ + LP+  +    F    +      +        
Sbjct: 117 EEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDD 176

Query: 247 V--WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ-EVITLCERLA 303
           +  +G    T+      +DIA+ T     + +   R + +  P+   +Q E+I+L E  +
Sbjct: 177 IVIYG-TGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS 235

Query: 304 GQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVD 363
           G       +P   L    Q     +          F +           MS       ++
Sbjct: 236 GLSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDL--------MSYEMRKDDIE 287

Query: 364 AKDI------ITLEKYLQDYFTNILKKLK 386
           A ++       +++  L  + +       
Sbjct: 288 ASNLYPELEFTSIDGLLDLFISGRAPPPT 316

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  144 bits (366), Expect = 2e-41
 Identities = 37/213 (17%), Positives = 82/213 (38%), Gaps = 25/213 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I +VG+TG +G+ +++      Y +    R +        +  A   + D + PE +   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNNVKAVHFDVDWT-PEEMAKQ 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV---- 201
           L G+  +I+ +    +    KVD  G V L+Q A+   +++++  S     +  +     
Sbjct: 61  LHGMDAIINVSGSGGKSL-LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAG 119

Query: 202 -----PLMEIKYCTEQFL-QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTR 255
                     K+  + +L +++ L + II+     +       + I +E S   T     
Sbjct: 120 FDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEE-ATGLIDINDEVSASNT----- 173

Query: 256 IAYMDTQDIARLTFVALRNEKINGRTLTF-SGP 287
                  D+A      +  +   G+ ++  +G 
Sbjct: 174 -----IGDVADTIKELVMTDHSIGKVISMHNGK 201

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score =  144 bits (365), Expect = 2e-40
 Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 20/298 (6%)

Query: 86  ILVVGATGTLGRQIVRR--ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           I + GATG LG  ++           +  +VR  PA A  L   G TV  AD      + 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALAAQGITVRQADYGDEAALT 60

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           + L GV  ++  ++    +   +        +I  AKA G++   + S+ + D  P + L
Sbjct: 61  SALQGVEKLLLISSSEVGQRAPQHR-----NVINAAKAAGVKFIAYTSLLHADTSP-LGL 114

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
            +    TE+ L DSG+ + ++R   + +  +   A   LE     G     +IA     D
Sbjct: 115 ADEHIETEKMLADSGIVYTLLRNGWYSENYLA-SAPAALEHGVFIGAAGDGKIASATRAD 173

Query: 264 IARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQL 323
            A      +      G+    +G  AWT  ++     + +G+   VT   +S   F   L
Sbjct: 174 YAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ--VTYQNLSEADFAAAL 231

Query: 324 TRFF--EWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFT 379
                 +    +AD LA S+V  S             L+G       TL + +   F 
Sbjct: 232 KSVGLPDG---LADMLADSDVGASKGGLFDDSKTLSKLIGHPTT---TLAESVSHLFN 283

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score =  139 bits (352), Expect = 1e-38
 Identities = 55/294 (18%), Positives = 106/294 (36%), Gaps = 16/294 (5%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           +I++ GATG LG  I  +A+    D     VR              +V   D    E++ 
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDDWRGKVSVRQLDYFNQESMV 60

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
               G+ TV+   +       K++       L+  AK  G+   +F   +    +    +
Sbjct: 61  EAFKGMDTVVFIPSIIHPSF-KRIPEVE--NLVYAAKQSGVAHIIFIGYYADQHNNPFHM 117

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
                   + L  SG+ +  +R+  +M  L   Y   ++    +       RI Y+   D
Sbjct: 118 SPYFGYASRLLSTSGIDYTYVRMAMYMDPLKP-YLPELMNMHKLIYPAGDGRINYITRND 176

Query: 264 IARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQL 323
           IAR     ++N    G+    SG  ++  +E+  +    +G +  +   PVS+  F    
Sbjct: 177 IARGVIAIIKNPDTWGKRYLLSGY-SYDMKELAAILSEASGTE--IKYEPVSLETFAEMY 233

Query: 324 TRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY 377
               +        LA      +  +     ++   L+    +   TL+ +LQ+ 
Sbjct: 234 -DEPKG---FGALLASMYHAGARGLLDQESNDFKQLVNDQPQ---TLQSFLQEN 280

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  122 bits (309), Expect = 5e-33
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 29/219 (13%)

Query: 84  TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
            ++L++GA G + R ++ +  D+         R +PA         + ++  D+     +
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKPYPTNSQIIMGDVLNHAAL 82

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----------- 191
              + G   V    TG        +D +   ++I   KA  +++ +F             
Sbjct: 83  KQAMQGQDIVYANLTGED------LDIQAN-SVIAAMKACDVKRLIFVLSLGIYDEVPGK 135

Query: 192 IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTD 251
               +       ++        ++ SGL + I+R        I  Y +    E       
Sbjct: 136 FVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEP------ 189

Query: 252 ALTRIAYMDTQDIARLTFVALRN-EKINGRTLTFSGPRA 289
              +   +  + +A L    +   EK  G  +  + P  
Sbjct: 190 --FKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score =  124 bits (314), Expect = 1e-32
 Identities = 50/281 (17%), Positives = 88/281 (31%), Gaps = 31/281 (11%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR--PRPAPADFLRDWGATVV 132
           M+         I VVGATG  G  ++R A   G+ VR  V         +       T+ 
Sbjct: 1   MAQQKKT----IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF 56

Query: 133 NADLS-KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              L      +     G H      T +  + I      GK       +A  IQ Y++ S
Sbjct: 57  QGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIA----IGKDLADAAKRAGTIQHYIYSS 112

Query: 192 IHNCDKH---PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVW 248
           + +   +   P VP+   K+  E +++  GLP   +    +              E    
Sbjct: 113 MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD 172

Query: 249 GTDAL-------TRIAYMD-TQDIARLTFVALRN--EKINGRTLTFSGPRAWTTQEVITL 298
           GT            + ++D   D+        ++  +K NG  +  +     +  +V   
Sbjct: 173 GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQVCAA 231

Query: 299 CERLAGQDANVTMVPVSVLR------FTRQLTRFFEWTNDV 333
             R   +      VP   ++      +  QL        + 
Sbjct: 232 FSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEH 272

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  101 bits (253), Expect = 4e-24
 Identities = 47/304 (15%), Positives = 86/304 (28%), Gaps = 43/304 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
             V+GATG LG    R     G+D+  + RP  +    L         A++     +   
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRP-SSQIQRLAYLEPECRVAEMLDHAGLERA 74

Query: 146 LVGVHTVIDCA-----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS--------- 191
           L G+  VI  A       R  +                     + + ++           
Sbjct: 75  LRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHP 134

Query: 192 ----IHNCDKHPEVPLMEIKYCT-----EQF---LQDSGLPHVIIRLC-----GFMQGLI 234
                H    +  +P  +  Y       ++       +GLP VI           +    
Sbjct: 135 QGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTT 194

Query: 235 GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE 294
           G+    I   +         +   +D  +  R   +AL   +I  R L           +
Sbjct: 195 GRVITAIGNGEMTHYVA--GQRNVIDAAEAGRGLLMALERGRIGERYLL--TGHNLEMAD 250

Query: 295 VITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMS 354
           +      L GQ A    + +++ R    L         V+ +L     L    +  +   
Sbjct: 251 LTRRIAELLGQPAPQP-MSMAMARA---LATLGRLRYRVSGQLPL---LDETAIEVMAGG 303

Query: 355 ETFD 358
           +  D
Sbjct: 304 QFLD 307

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 97.5 bits (243), Expect = 1e-23
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 24/225 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I+++GA+G +G  ++  AL+ G++V  +VR  P       +    V  AD+S  + +   
Sbjct: 7   IVLIGASGFVGSALLNEALNRGFEVTAVVR-HPEKIKIENE-HLKVKKADVSSLDEVCEV 64

Query: 146 LVGVHTVIDCATGRPEEP-IKKVDWEGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEVPL 203
             G   VI         P I     +  + +I   K  G+ +++      +    P + L
Sbjct: 65  CKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRL 124

Query: 204 MEIKYCT---------------EQFLQDSGLPHVIIRLCGFMQ-GLIGQYAVPILEEKSV 247
           M+                       +++  +  V       M+ G+         ++  V
Sbjct: 125 MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIV 184

Query: 248 WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTT 292
                +   +++  +D A      L + K +    T         
Sbjct: 185 D----IVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH 225

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 95.5 bits (237), Expect = 5e-23
 Identities = 25/220 (11%), Positives = 64/220 (29%), Gaps = 34/220 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDE-GYDVRCLVR--PRPAPADFLRDWGATVVNADLSKPETI 142
           I ++GA G + + +    L      +    R      P + +     TV+      P  +
Sbjct: 8   ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------ 196
              +     V   A                 ++++      I++ +  S+          
Sbjct: 68  EQAVTNAEVVFVGAMESG---------SDMASIVKALSRXNIRRVIGVSMAGLSGEFPVA 118

Query: 197 ------KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT 250
                  +  +  ++ +      L++S L + I+RL              ++ E + +  
Sbjct: 119 LEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDP-EXTDYELIPEGAQFND 177

Query: 251 DALTRIAYMDTQDIARLTFVALRN---EKINGRTLTFSGP 287
             ++R        + +  F  L        +  ++    P
Sbjct: 178 AQVSRE------AVVKAIFDILHAADETPFHRTSIGVGEP 211

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 87.7 bits (217), Expect = 2e-20
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 27/220 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GATG  G +I+  A + G++V  +VR               ++  D+       + 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGKITQTHK-DINILQKDIFDLTL--SD 58

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-------------I 192
           L   + V+D     P+E   +        LI         + +                +
Sbjct: 59  LSDQNVVVDAYGISPDEA--EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTL 116

Query: 193 HNCDKHPEVPLMEIKYCTEQFLQ-----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV 247
                  E P         + L+      +      I      +         I ++  +
Sbjct: 117 LESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLL 176

Query: 248 WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP 287
           +G+D  + I+    +D A      +          T +G 
Sbjct: 177 FGSDGNSFISM---EDYAIAVLDEIERPNHLNEHFTVAGK 213

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 82.4 bits (203), Expect = 2e-18
 Identities = 38/221 (17%), Positives = 62/221 (28%), Gaps = 27/221 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I V+GATG  G  IV  A   G++V  +VR  P  A      GATV            A 
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKAADR--LGATVATLVKEPLVLTEAD 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI----------HNC 195
           L  V  V+D  +         +  +    L+   +                         
Sbjct: 60  LDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMI 119

Query: 196 DKHPEVPLME--------IKYCTEQFLQDSGLPHVIIRLCG-FMQGLIGQYAVPILEEKS 246
              PE    +          Y  +    ++ +  + I     F  G    Y     ++  
Sbjct: 120 LDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAG--KDTL 177

Query: 247 VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP 287
           + G D  + I      ++A      L +       +     
Sbjct: 178 LVGEDGQSHITT---GNMALAILDQLEHPTAIRDRIVVRDA 215

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 80.6 bits (199), Expect = 1e-17
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+ ++GA+G  GR +++  L++G    V  + R R    D            D  K +  
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEEAYKNVNQEVVDFEKLDDY 78

Query: 143 PATLVGVHTVIDCATGRPEEPIK----KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH 198
            +   G      C      +       +VD +  +   + AKA G + +   S    DK 
Sbjct: 79  ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 138

Query: 199 PEVPLMEIKYCTEQFLQDSGLPHVII 224
                +++K   E  +++       +
Sbjct: 139 SNFLYLQVKGEVEAKVEELKFDRYSV 164

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 26/212 (12%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R      ++  +     +
Sbjct: 5   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR------LDNPVGPLAEL 58

Query: 143 PATLV-GVHTVIDC-----ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
              L   + T   C          EE  + VD++  +A+ + A  MG + Y+  S    D
Sbjct: 59  LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD 118

Query: 197 KHPEVPLMEIKYCTEQFLQDSGLPH-VIIR---LCG-----FMQGLIGQYAVPILEEK-- 245
               +    +K   EQ LQ+ G P   I R   L G      +  ++      IL  K  
Sbjct: 119 AKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYH 178

Query: 246 SVWGTD---ALTRIAYMDTQDIARLTFVALRN 274
            +   D   AL R+A  + + +  +    LR 
Sbjct: 179 GIEACDLARALWRLALEEGKGVRFVESDELRK 210

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 66.7 bits (162), Expect = 3e-12
 Identities = 50/338 (14%), Positives = 88/338 (26%), Gaps = 60/338 (17%)

Query: 87  LVVGATGTLGRQIVRRALDEGY-----DVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
           L+VG TG +G  +               V  + R R  PA +  D     V  D+S P+ 
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-RTRPA-WHEDNPINYVQCDISDPDD 62

Query: 142 IPATLVGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQ---------- 185
             A L  +  V              +E  +         ++                   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSK-MFRNVLDAVIPNCPNLKHISLQTGR 121

Query: 186 KYVFYSIHNCDK--HPEVPLME---------IKYCTEQFL-----QDSGLPHVIIR---L 226
           K+      +  K    + P  E           Y  E  +     +  GL   + R   +
Sbjct: 122 KHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNI 181

Query: 227 CGFMQG-------LIGQYAVPILEEKS--VWGTDALTRIAYMDTQD---IARLTFVALRN 274
            GF           +  YA     E     +         Y D  D   IA     A  +
Sbjct: 182 FGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD 241

Query: 275 EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVA 334
                     S    +  +    +     G +       V       +L    +    V 
Sbjct: 242 PYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGV-----DLKLQDLMKGKEPVW 296

Query: 335 DRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEK 372
           + +     LT   +  V +    D++  +   + ++ K
Sbjct: 297 EEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNK 334

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 26/163 (15%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
            IL+ G  G LG ++ RR   +G++V  L R  +P PA      G   + AD+++P+T+ 
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA------GVQTLIADVTRPDTLA 57

Query: 144 A-TLVGVHTVIDCAT--GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI----HNCD 196
           +   +    ++ C       +E  +    EG    +   +   +Q   F S         
Sbjct: 58  SIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEV 117

Query: 197 K---------HPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFM 230
           +           +    +     E  L        I+R  G  
Sbjct: 118 EEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIY 158

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G LGR +  R       +R        PA          V  DL+    + A 
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP----NEECVQCDLADANAVNAM 61

Query: 146 LVGVHTVIDCA---TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           + G   ++        +P E I + +  G   L + A+A G  + VF S
Sbjct: 62  VAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 25/161 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G +G  I        ++VR              +    +V  DL+  + +   
Sbjct: 5   LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----AEAHEEIVACDLADAQAVHDL 60

Query: 146 LVGVHTVIDCA---TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEV 201
           +     +I        RP   I + +  G   L + A+ +G  + VF S  H    +P  
Sbjct: 61  VKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRT 120

Query: 202 PLMEI-------------KYCTEQFLQD----SGLPHVIIR 225
             ++              K   E           +  + IR
Sbjct: 121 TRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIR 161

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 40/238 (16%), Positives = 69/238 (28%), Gaps = 35/238 (14%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++L  G  G   R + R    +G+ +    R  P   + +R  GA  +     +P     
Sbjct: 7   TLLSFGH-GYTARVLSRALAPQGWRIIGTSR-NPDQMEAIRASGAEPLLWPGEEPS---- 60

Query: 145 TLVGV-HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI----------- 192
            L GV H +I  A     +P+        +     A+A   +   + S            
Sbjct: 61  -LDGVTHLLISTAPDSGGDPVLAA-----LGDQIAARAAQFRWVGYLSTTAVYGDHDGAW 114

Query: 193 --HNCDKHPEVPL-MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPI---LEEKS 246
                   P            +Q+     LP  + RL G      G    P     +   
Sbjct: 115 VDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIY----GPGRGPFSKLGKGGI 170

Query: 247 VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAG 304
                     + +  +DIA++   ++      G             Q+VI     L G
Sbjct: 171 RRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQG 227

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGA--- 129
           M+   P+   +  VVG TG +   +V+  L +GY V   VR          L +      
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD 60

Query: 130 -TVVNADLSKPETIPATLVGVHTVIDCAT 157
             +  ADL+   +  A + G   V   AT
Sbjct: 61  LKIFRADLTDELSFEAPIAGCDFVFHVAT 89

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 47.5 bits (114), Expect = 4e-06
 Identities = 46/264 (17%), Positives = 91/264 (34%), Gaps = 62/264 (23%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGATVVNA 134
            IL+ G  G LG  ++   L +G+++  +          + P           G +V+  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVA---------GLSVIEG 72

Query: 135 DLSKPETIPATLVG--VHTVID-CATGR-PEEPIKKVDWE----GKVALIQCAKAMGIQK 186
            ++    +           V+   A  + P++  +  D      G + + + A   G+++
Sbjct: 73  SVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAE--DAATNVQGSINVAKAASKAGVKR 130

Query: 187 YVFYSIHNCDKHPE-VPLMEI------------KYCTEQFLQDSGLPHVIIRL---CGFM 230
            + +    C   P  VP+               K   E FL  S +P V +RL    G  
Sbjct: 131 LLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTG-P 189

Query: 231 QGLIGQYAVPI-----LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF- 284
           +  IG   +P         +  + +D   R  ++D  D   +  ++L+       T  F 
Sbjct: 190 RLAIGP--IPTFYKRLKAGQKCFCSDT-VR-DFLDMSDFLAIADLSLQE---GRPTGVFN 242

Query: 285 --SGPRAWTTQEVITLCERLAGQD 306
             +G    + +EV  +     G  
Sbjct: 243 VSTG-EGHSIKEVFDVVLDYVGAT 265

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGA---- 129
           +  G+ V     LV GA G +   +V + L+ GY VR   R   +    L+  W A    
Sbjct: 8   LPEGSLV-----LVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPG 61

Query: 130 ---TVVNADLSKPETIPATLVGVHTVIDCAT 157
              T V  D+ K       + G   V   A+
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIAS 92

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD-WGA----TVVNADLS 137
           + V G TG LG  I++  L+ GY V   +R  P       FL +  GA       NADLS
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLS 63

Query: 138 KPETIPATLVGVHTVIDCAT 157
            P++  A + G   +   A+
Sbjct: 64  NPDSFAAAIEGCVGIFHTAS 83

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 55/355 (15%), Positives = 108/355 (30%), Gaps = 85/355 (23%)

Query: 86  ILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ILV G++G +G ++V    ++ G                    G   +  D+S  + I  
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDR 56

Query: 145 TLV--GVHTVIDCA---TGRPEE-PIK--KVDWEGKVALIQCAKAMGIQKYVF------Y 190
            +    +  +   A   + + E+ P    KV+  G   +++ AK   ++K V       +
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVF 116

Query: 191 SIHNCDKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIRL---CGFMQ 231
                 + P+  +  I            K   E   Q      GL    +R      +  
Sbjct: 117 G----PETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKA 172

Query: 232 ---GLIGQYAVPILE-----EKSVWGTDALTRIAYMDTQDIARLTFVALRNEK---INGR 280
                   YAV I       EK          +  M   D  +        ++   +   
Sbjct: 173 EPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRN 232

Query: 281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFS 340
               +    +T  E+ +  +    +                      E+  D  D++A +
Sbjct: 233 GYNVTA-YTFTPSELYSKIKERIPEFE-------------------IEYKEDFRDKIAAT 272

Query: 341 EVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQA 395
              + D+      SE  +  G   +    L++ + D   +I +K   L  + K A
Sbjct: 273 WPESLDS------SEASNEWGFSIE--YDLDRTIDDMIDHISEK---LGIEGKHA 316

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 61  SAGGGTS--GTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-- 116
           S G  T+    V  V  + G  V+    +V+  TG +G +       EG +V    R   
Sbjct: 95  SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154

Query: 117 --RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVA 174
             + A     + +   V  A+ +   +    + G H V   A     E + +  W+ + +
Sbjct: 155 KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF-TAGAIGLELLPQAAWQNESS 213

Query: 175 L 175
           +
Sbjct: 214 I 214

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 71  QAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL 124
           +   +  G+P+    + + G+ G +GR +  +    G++V  LVR  P P    
Sbjct: 138 RTSTLFDGSPLT---VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF 188

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 28/166 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRC---LVRPRPAPADFLRDW-GATVVNADLSKPET 141
           + + G  G +G  I    L+ G  V         R    + L+D    T V   ++    
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDHPNLTFVEGSIADHAL 80

Query: 142 IPATLVGVH--TVIDCA--TGRPEEPIKKVDW--EGKVALIQCAKAMGIQKYVFYS---- 191
           +   +  +    V+  A     P++          G   ++Q AK   + ++V++     
Sbjct: 81  VNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALC 140

Query: 192 -------IHNCDKHPEVPLM----EIKYCTEQFLQDSGLPHVIIRL 226
                        HP  P        K   E +L+ SGL  V  RL
Sbjct: 141 YGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRL 186

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRD-WGA----TVVNADLSK 138
           + V GA+G +G  +V R L+ GY VR  VR          L D   A    T+  ADL+ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD 67

Query: 139 PETIPATLVGVHTVIDCAT 157
             +    + G   V   AT
Sbjct: 68  EGSFDEAIKGCTGVFHVAT 86

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 19/156 (12%)

Query: 66  TSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR 125
            + T + +      P     I + GA G +   I RR   EG+ V      +    + + 
Sbjct: 12  GAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN---EHMT 68

Query: 126 DWGATV--VNADLSKPETIPATLVGVHTVIDCA--------TGRPEEPIKKVDWEGKVAL 175
           +          DL   E       GV  V + A               I   +      +
Sbjct: 69  EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM 128

Query: 176 IQCAKAMGIQKYVF------YSIHNCDKHPEVPLME 205
           I+ A+  GI+++ +      Y      +   V L E
Sbjct: 129 IEAARINGIKRFFYASSACIYPEFKQLETTNVSLKE 164

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 17/129 (13%)

Query: 80  PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGA 129
           P +P   L+ G  G +G  ++   L     V  L          +    +     +    
Sbjct: 24  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83

Query: 130 TVVNADLSKPETIPATLVGVHTVIDCA--TGRP---EEPIKKVDW--EGKVALIQCAKAM 182
             +  D+   +       GV  V+  A     P    +PI       +G + ++  A+  
Sbjct: 84  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 143

Query: 183 GIQKYVFYS 191
            +Q + + +
Sbjct: 144 KVQSFTYAA 152

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 23/86 (26%)

Query: 77  PGTPVRPTSILVVGATGTLGRQIVR---RALDEGYDVRCLVRPRPAPA------------ 121
           PG      ++L+ GATG LGR +V    R LD    + CLVR                  
Sbjct: 67  PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSG 126

Query: 122 --DFLRDWGA------TVVNADLSKP 139
             + LR +         VV  D S+P
Sbjct: 127 DPELLRHFKELAADRLEVVAGDKSEP 152

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 19/59 (32%), Positives = 25/59 (42%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           IL+ GA+  +G     R L+ G+ V    R   A    LR  GA  +  D S    I A
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMA 88

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 17/116 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL-------VRPRPAPADFLRDWGATVVNADLSK 138
           IL+ G  G +G  + R  +  G +V  L       + P      FL      +   DLS 
Sbjct: 10  ILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSD 69

Query: 139 PETIP--ATLVGV-HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              +   A+   V  +        P + +  VD      L+    ++G+ K V  S
Sbjct: 70  VRLVYHLASHKSVPRSFKQ-----PLDYLDNVD--SGRHLLALCTSVGVPKVVVGS 118

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 39/180 (21%), Positives = 56/180 (31%), Gaps = 53/180 (29%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSK 138
           +LV G  G +G  IV   L  G +V  L        D L          G      DL  
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVL--------DNLATGKRENVPKGVPFFRVDLRD 54

Query: 139 PETIPATLVGVH--TVIDCATGRP------EEPIKKVDWE----GKVALIQCAKAMGIQK 186
            E +           V   A  +       E+P+   D+E    G + L++  +  G++K
Sbjct: 55  KEGVERAFREFRPTHVSHQA-AQASVKVSVEDPVL--DFEVNLLGGLNLLEACRQYGVEK 111

Query: 187 YVFYS--------------IHNCDKHPEVPLM---EIKYCTEQFLQD----SGLPHVIIR 225
            VF S                  +  P  P       K   E +L       GL  V +R
Sbjct: 112 LVFASTGGAIYGEVPEGERAE--ETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLR 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.98
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.98
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.92
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.91
1spx_A	278	Short-chain reductase family member (5L265); paral	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.89
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.89
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.88
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.88
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.88
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.88
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.88
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.88
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.87
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.87
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.87
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.87
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.87
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.87
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.87
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.87
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.87
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.87
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.87
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.86
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.86
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.86
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.86
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.86
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.86
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.86
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.86
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.86
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.86
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.86
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.86
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.86
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.86
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.85
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.85
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.85
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.85
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.85
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.85
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.85
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.85
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.85
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.85
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.85
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.85
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.85
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.85
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.85
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.85
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.85
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.85
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.85
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.84
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.84
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.84
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.84
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.84
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.84
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.84
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.84
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.84
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.84
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.84
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.84
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.84
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.84
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.84
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.84
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.84
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.83
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.83
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.83
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.83
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.83
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.83
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.83
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.83
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.83
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.83
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.83
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.83
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.83
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.83
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.83
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.83
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.83
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.83
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.82
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.82
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.82
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.82
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.82
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.82
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.82
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.82
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.82
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.82
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.82
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.82
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.82
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.82
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.81
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.81
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.81
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.81
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.81
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.81
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.81
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.81
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.81
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.81
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.81
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.81
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.8
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.8
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.8
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.8
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.8
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.8
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.8
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.8
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.8
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.79
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.79
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.79
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.79
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.79
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.79
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.79
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.79
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.79
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.79
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.79
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.79
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.78
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.78
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.78
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.78
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.78
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.78
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.78
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.77
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.77
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.77
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.77
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.77
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.76
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.76
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.75
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.75
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.75
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.73
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.73
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.73
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.72
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.72
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.72
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.72
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.71
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.71
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.71
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.7
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.7
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.7
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.7
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.69
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.66
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.63
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.59
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.57
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.55
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.54
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.53
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.53
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.46
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.42
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.41
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.39
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.34
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.32
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.28
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.23
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.21
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.2
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.02
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.01
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.01
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.87
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.85
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.82
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.81
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.77
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.77
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.76
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.72
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.7
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.64
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.63
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.6
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.53
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.51
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.48
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.42
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.38
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.35
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.26
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.26
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.24
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.17
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.07
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.0
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.93
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.92
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.87
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.84
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.84
1lnq_A	336	MTHK channels, potassium channel related protein;	97.83
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.83
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.76
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.69
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.69
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.67
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.65
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.61
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.6
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.57
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.57
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.56
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.56
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.54
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.52
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.52
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.5
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.48
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.47
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.47
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.47
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.46
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.46
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.46
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.44
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.44
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.44
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.42
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.41
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.41
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.4
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.38
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.37
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.36
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.33
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.32
2duw_A	145	Putative COA-binding protein; ligand binding prote	97.32
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.32
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.31
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.31
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.3
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.29
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.28
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.27
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.25
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.25
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.25
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.23
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.23
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.23
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.22
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.22
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.21
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.2
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.19
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.19
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.18
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.18
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	97.17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.14
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.14
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	97.13
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.12
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.11
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.1
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.1
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.1
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.09
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.08
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.07
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.07
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.06
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.06
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.05
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.05
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.04
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.04
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.03
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.03
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.03
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.03
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.03
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.02
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.01
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.99
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.98
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.97
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.95
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.93
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.93
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.92
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.92
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.91
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.9
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.9
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.9
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.9
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.9
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.89
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	96.88
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.88
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.88
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.88
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.87
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.87
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.86
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.85
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.85
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	96.84
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.83
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.82
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.82
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.8
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.8
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.79
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.79
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.79
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.78
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.78
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.78
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.76
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.76
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.76
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.75
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.74
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.74
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.74
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.73
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.73
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.72
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.72
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.71
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.7
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.69
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	96.69
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.69
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.68
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.67
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.66
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.66
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.66
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.65
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.65
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.63
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.63
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.63
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.62
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.6
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.6

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.3e-40  Score=312.72  Aligned_cols=268  Identities=16%  Similarity=0.135  Sum_probs=220.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC---
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR---  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~---  159 (399)
                      +|+|||||||||||++|++.|+++|++|++++|+ +.... +.  +++++.+|++ .+++.++++++|+|||+|+..   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-IN--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ   76 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-CC--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence            5789999999999999999999999999999998 33333 33  8999999999 999999999999999999843   


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh----CCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD----SGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~----~g~~~~  222 (399)
                      .+....++|+.++.+++++|++.+++||||+||.+++.             .|.++|+.+|..+|+++++    .|++++
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~  156 (311)
T 3m2p_A           77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIK  156 (311)
T ss_dssp             SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEE
Confidence            45667789999999999999999999999999987643             2457899999999998865    799999


Q ss_pred             EEecCccccccc------ccchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHH
Q 015872          223 IIRLCGFMQGLI------GQYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEV  295 (399)
Q Consensus       223 ilRp~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~  295 (399)
                      ++||+++|+...      ..++..+..+..+.. ++++..++|+|++|+|++++.+++++. .+++||+++++.+|+.|+
T Consensus       157 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~s~~e~  235 (311)
T 3m2p_A          157 NLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDALTNYEV  235 (311)
T ss_dssp             EEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEECHHHH
T ss_pred             EEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcccHHHH
Confidence            999999997533      334444455554332 335666799999999999999999876 678999999999999999


Q ss_pred             HHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHH
Q 015872          296 ITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQ  375 (399)
Q Consensus       296 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~  375 (399)
                      ++.+.+.+|.+.++...+.+             ..             .....+..|+++++++|||+|+  .+++|+|+
T Consensus       236 ~~~i~~~~g~~~~~~~~~~~-------------~~-------------~~~~~~~~d~~k~~~~lG~~p~--~~~~~~l~  287 (311)
T 3m2p_A          236 ANTINNAFGNKDNLLVKNPN-------------AN-------------EGIHSSYMDSSKAKELLDFSTD--YNFATAVE  287 (311)
T ss_dssp             HHHHHHHTTCTTCEEECSSS-------------BC-------------CSCCCBCBCCHHHHHHSCCCCS--CCHHHHHH
T ss_pred             HHHHHHHhCCCCcceecCCC-------------CC-------------CCcCceecCHHHHHHHhCCCcc--cCHHHHHH
Confidence            99999999998887776542             00             0122344678999999999998  79999999


Q ss_pred             HHHHHHHHh
Q 015872          376 DYFTNILKK  384 (399)
Q Consensus       376 ~~~~~~~~~  384 (399)
                      ++++|+++.
T Consensus       288 ~~~~~~~~~  296 (311)
T 3m2p_A          288 EIHLLMRGL  296 (311)
T ss_dssp             HHHHHHCC-
T ss_pred             HHHHHHHhc
Confidence            999998644

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.2e-41  Score=323.20  Aligned_cols=283  Identities=14%  Similarity=0.180  Sum_probs=221.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc---c-------CCcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D-------WGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~---~-------~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      .+++|+|||||||||||++|++.|+++|++|++++|........+.   .       .+++++++|++|++++.++++++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            3456899999999999999999999999999999997554332221   1       57899999999999999999999


Q ss_pred             CEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHH
Q 015872          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYC  209 (399)
Q Consensus       150 d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~  209 (399)
                      |+|||+|+..       .+..+.++|+.++.+++++|++.++++|||+||.+++.             .|.++|+.+|..
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~  181 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV  181 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence            9999999842       23345689999999999999999999999999987643             335789999999


Q ss_pred             HHHHHH----hCCCCEEEEecCccccccc----------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          210 TEQFLQ----DSGLPHVIIRLCGFMQGLI----------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       210 ~E~~l~----~~g~~~~ilRp~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +|++++    +.|++++++||+++||...          ..++..+..+..+. .++++..++|+|++|+|++++.++++
T Consensus       182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            999875    4699999999999997532          23344455555433 23346677999999999999999988


Q ss_pred             -CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          275 -EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       275 -~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                       +...+++||+++++.+|+.|+++.+.+.+|.+..+...+...          ....            ......+..|+
T Consensus       262 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~------------~~~~~~~~~d~  319 (351)
T 3ruf_A          262 KDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKY----------REFR------------SGDVRHSQADV  319 (351)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EE----------ECCC------------TTCCSBCCBCC
T ss_pred             ccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccc----------cCCC------------CCccceeeeCH
Confidence             455789999999999999999999999999854332222110          0000            00112334688


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      ++++++|||+|+  ++++|+|+++++|++++++
T Consensus       320 ~k~~~~lG~~p~--~~~~~~l~~~~~~~~~~~~  350 (351)
T 3ruf_A          320 TKAIDLLKYRPN--IKIREGLRLSMPWYVRFLK  350 (351)
T ss_dssp             HHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCC--CCHHHHHHHHHHHHHHhhc
Confidence            999999999998  7999999999999987653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=8e-42  Score=328.90  Aligned_cols=298  Identities=14%  Similarity=0.220  Sum_probs=225.8

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCC-CCCcHHHHhcCCCEEEECC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~-d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ..|++|+|||||||||||++|+++|+++ ||+|++++|+..+........+++++.+|++ |.+.+.++++++|+|||+|
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A   99 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV   99 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence            3567789999999999999999999998 9999999998666555445568999999999 8999999999999999999


Q ss_pred             CCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------------CCCCcHHHHHHH
Q 015872          157 TGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYC  209 (399)
Q Consensus       157 ~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~~y~~~K~~  209 (399)
                      +...       +...+++|+.++.+++++|++.+ ++|||+||.+++.                    .|.++|+.+|..
T Consensus       100 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~  178 (372)
T 3slg_A          100 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQL  178 (372)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHH
T ss_pred             ccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHH
Confidence            8432       33456789999999999999999 8999999986532                    233379999999


Q ss_pred             HHHHHHhC---CCCEEEEecCccccccc--------------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHH
Q 015872          210 TEQFLQDS---GLPHVIIRLCGFMQGLI--------------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       210 ~E~~l~~~---g~~~~ilRp~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      +|+++++.   |++++++||+++||...              ..++..+..+..+. ..+++..++|+|++|+|++++.+
T Consensus       179 ~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  258 (372)
T 3slg_A          179 MDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKI  258 (372)
T ss_dssp             HHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHH
Confidence            99999765   99999999999997642              22334444554332 22346667999999999999999


Q ss_pred             HhCCc--cCCcEEEEcCC-CCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcc
Q 015872          272 LRNEK--INGRTLTFSGP-RAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTV  348 (399)
Q Consensus       272 l~~~~--~~g~~~~l~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (399)
                      ++++.  ..+++||++++ +.+|+.|+++.+.+.+|.+.++...|...           .........+ +.........
T Consensus       259 ~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~  326 (372)
T 3slg_A          259 IENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRV-----------KLVETTSGAY-YGNGYQDVQN  326 (372)
T ss_dssp             HHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTC-----------CEEEC--------------CC
T ss_pred             HhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccc-----------eeeecccccc-ccCCccccce
Confidence            99875  56899999995 79999999999999999876654433110           0000000000 0000001122


Q ss_pred             ccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhhh
Q 015872          349 FSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQ  391 (399)
Q Consensus       349 ~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~  391 (399)
                      ...|.++++++|||+|+  ++++|+|+++++|++++.++.+..
T Consensus       327 ~~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~~~~~  367 (372)
T 3slg_A          327 RVPKIENTMQELGWAPQ--FTFDDALRQIFEAYRGHVADARAL  367 (372)
T ss_dssp             CCBCCHHHHHHHTCCCC--CCHHHHHHHHHHHHTTCHHHHHHT
T ss_pred             eecCHHHHHHHcCCCCC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            33678999999999998  799999999999998887665543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=2.7e-40  Score=315.04  Aligned_cols=282  Identities=18%  Similarity=0.191  Sum_probs=220.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCC-Cccccc----cCCcEEEEccCCCCCcHHHHhcC--CC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PADFLR----DWGATVVNADLSKPETIPATLVG--VH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~--~d  150 (399)
                      .+++|+|||||||||||++|+++|+++|  ++|++++|.... ....+.    ..+++++++|++|++.+.+++++  +|
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            3556899999999999999999999999  777777776422 222222    24789999999999999999987  99


Q ss_pred             EEEECCCC-------CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------CCCcHHHHHHH
Q 015872          151 TVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------PEVPLMEIKYC  209 (399)
Q Consensus       151 ~Vi~~a~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------~~~~y~~~K~~  209 (399)
                      +|||+|+.       ..+..+.++|+.++.+++++|++.++++|||+||.+++..              |..+|+.+|..
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~  180 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS  180 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence            99999983       2345567899999999999999999999999999866433              34789999999


Q ss_pred             HHHHHHh----CCCCEEEEecCccccccc------ccchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          210 TEQFLQD----SGLPHVIIRLCGFMQGLI------GQYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       210 ~E~~l~~----~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      +|+++++    .|++++++||+++||...      ..++..+..+..+.. ++++..++|+|++|+|++++.+++++. .
T Consensus       181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  259 (346)
T 4egb_A          181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-V  259 (346)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-C
Confidence            9998854    699999999999997532      223444455553322 334666799999999999999999876 6


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      |++||+++++.+|+.|+++.+.+.+|.+.+ +...+...                           .....+..|.++++
T Consensus       260 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---------------------------~~~~~~~~d~~k~~  312 (346)
T 4egb_A          260 GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRL---------------------------GHDRRYAINAEKMK  312 (346)
T ss_dssp             TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC-----------------------------CCCSCCCBCCHHHH
T ss_pred             CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCC---------------------------CCcceeeccHHHHH
Confidence            789999999999999999999999998755 22222110                           01223446889999


Q ss_pred             cccCCCCCccccHHHHHHHHHHHHHHhhHHHhhh
Q 015872          358 DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQ  391 (399)
Q Consensus       358 ~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~  391 (399)
                      ++|||+|+  ++++|+|+++++|++++.+..+..
T Consensus       313 ~~lG~~p~--~~~~e~l~~~~~~~~~~~~~~~~~  344 (346)
T 4egb_A          313 NEFDWEPK--YTFEQGLQETVQWYEKNEEWWKPL  344 (346)
T ss_dssp             HHHCCCCC--CCHHHHHHHHHHHHHHCHHHHGGG
T ss_pred             HHcCCCCC--CCHHHHHHHHHHHHHhhhhhhhhc
Confidence            99999998  799999999999999887765543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=3.1e-40  Score=314.78  Aligned_cols=268  Identities=20%  Similarity=0.279  Sum_probs=217.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ..++|+|||||||||||++|++.|+++|++|++++|+...       .+++++.+|++|.+++.++++++|+|||+|+..
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~   88 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM   88 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence            4456889999999999999999999999999999998544       478899999999999999999999999999843


Q ss_pred             CC-----CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC---------------CCCcHHHHHHHHHHHHH----
Q 015872          160 PE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH---------------PEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       160 ~~-----~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~---------------~~~~y~~~K~~~E~~l~----  215 (399)
                      ..     ....++|+.++.+++++|++.++++|||+||.+++..               +..+|+.+|..+|++++    
T Consensus        89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~  168 (347)
T 4id9_A           89 SWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQR  168 (347)
T ss_dssp             CSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            22     3456789999999999999999999999999776543               45779999999999885    


Q ss_pred             hCCCCEEEEecCccc-------------ccc-----------------cccchhhhccccc--cccCCCCcceec----e
Q 015872          216 DSGLPHVIIRLCGFM-------------QGL-----------------IGQYAVPILEEKS--VWGTDALTRIAY----M  259 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~-------------~~~-----------------~~~~~~~~~~~~~--~~~~~~~~~~~~----v  259 (399)
                      +.+++++++||+++|             |..                 +..++..+..+..  +++.+ +..++|    +
T Consensus       169 ~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~i  247 (347)
T 4id9_A          169 SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN-ENGRPFRMHIT  247 (347)
T ss_dssp             HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC-TTCCBCEECEE
T ss_pred             hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC-CcccCCccCcE
Confidence            579999999999999             433                 1223333444443  33433 444588    9


Q ss_pred             eHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 015872          260 DTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAF  339 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (399)
                      |++|+|++++.+++++...+++||+++++.+|+.|+++.+.+.+|.+.++..+|...                       
T Consensus       248 ~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----------------------  304 (347)
T 4id9_A          248 DTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG-----------------------  304 (347)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC-----------------------
T ss_pred             eHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc-----------------------
Confidence            999999999999999866689999999999999999999999999987776655321                       


Q ss_pred             hhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          340 SEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                             ..+..|+++++++|||+|+  ++++|+|+++++|+.+....
T Consensus       305 -------~~~~~d~~k~~~~lG~~p~--~~~~~~l~~~~~~~~~~~~~  343 (347)
T 4id9_A          305 -------VYYHTSNERIRNTLGFEAE--WTMDRMLEEAATARRQRLAK  343 (347)
T ss_dssp             -------CBCCBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHCC-
T ss_pred             -------cccccCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHhhhhc
Confidence                   0233678999999999998  79999999999999876543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-39  Score=310.08  Aligned_cols=293  Identities=16%  Similarity=0.141  Sum_probs=221.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC----
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG----  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~----  158 (399)
                      +|+|||||||||||++++++|+++|++|++++|+..+. ..+...+++++.+|++|.+++.++++++|+|||+|+.    
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   91 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI-QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR   91 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG-GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh-hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence            36899999999999999999999999999999985543 3344457999999999999999999999999999983    


Q ss_pred             -CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------C----CCcHHHHHHHHHHHHHh---
Q 015872          159 -RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------P----EVPLMEIKYCTEQFLQD---  216 (399)
Q Consensus       159 -~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------~----~~~y~~~K~~~E~~l~~---  216 (399)
                       .+...+.++|+.++.+++++|++.++++|||+||.+++..              |    ..+|+.+|..+|+++++   
T Consensus        92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~  171 (342)
T 2x4g_A           92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR  171 (342)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh
Confidence             2345667899999999999999999999999999876532              1    56899999999998865   


Q ss_pred             CCCCEEEEecCccccccc-----ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCC
Q 015872          217 SGLPHVIIRLCGFMQGLI-----GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWT  291 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s  291 (399)
                      .|++++++||+++|+...     ..++..+..+.....  ++.+++++|++|+|++++.+++++.. |++||+++++ +|
T Consensus       172 ~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~~~-~s  247 (342)
T 2x4g_A          172 NGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHN-LE  247 (342)
T ss_dssp             TTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE--ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECCEE-EE
T ss_pred             cCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc--cCCCcceeeHHHHHHHHHHHHhCCCC-CceEEEcCCc-cc
Confidence            389999999999997543     223333334432222  35667999999999999999988764 8899999998 99


Q ss_pred             HHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCC-CCCccccH
Q 015872          292 TQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGV-DAKDIITL  370 (399)
Q Consensus       292 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~-~p~~~~~l  370 (399)
                      +.|+++.+.+.+|.+.++ .+|.+.....+.+.+++.........+.-.........+..|+++++++||| +|.   ++
T Consensus       248 ~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p~---~~  323 (342)
T 2x4g_A          248 MADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTT---AL  323 (342)
T ss_dssp             HHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCCS---CH
T ss_pred             HHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCCC---CH
Confidence            999999999999999888 8888876655544333221110000000000000122344678999999999 995   99


Q ss_pred             HHHHHHHHHHHHHh
Q 015872          371 EKYLQDYFTNILKK  384 (399)
Q Consensus       371 ee~l~~~~~~~~~~  384 (399)
                      +|+|+++++|++++
T Consensus       324 ~~~l~~~~~~~~~~  337 (342)
T 2x4g_A          324 DDTLLRAIDWFRDN  337 (342)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999999754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=2.1e-39  Score=300.71  Aligned_cols=284  Identities=16%  Similarity=0.222  Sum_probs=220.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      |+|||||||||||+++++.|+++  |++|++++|+..+. ..+...+++++.+|++|++++.++++++|+|||+++....
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   79 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD   79 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcC
Confidence            46999999999999999999999  99999999985443 3334458899999999999999999999999999985322


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhh
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPI  241 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~  241 (399)
                         .++|+.++.+++++|++.++++||++||.+++.. ..+|+.+|..+|+++++.|++++++||+.++++....++...
T Consensus        80 ---~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~  155 (287)
T 2jl1_A           80 ---NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-IIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRAS  155 (287)
T ss_dssp             ---HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-CSTHHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGGHHH
T ss_pred             ---chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-CCchHHHHHHHHHHHHHcCCCeEEEECCEeccccchhhHHHH
Confidence               2569999999999999999999999999887643 468999999999999999999999999988877634444444


Q ss_pred             ccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHH
Q 015872          242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTR  321 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~  321 (399)
                      ...+......++..++++|++|+|++++.+++++...|++||+++++.+|+.|+++.+.+.+|.+.++..+|.+......
T Consensus       156 ~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~  235 (287)
T 2jl1_A          156 TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFL  235 (287)
T ss_dssp             HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHH
T ss_pred             hhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHH
Confidence            43332222234566799999999999999999876678899999998999999999999999999988888876554322


Q ss_pred             HHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHH
Q 015872          322 QLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFT  379 (399)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~  379 (399)
                      ..   .+.+......+...........+..+.++++++|| ++   ++++|+|+++++
T Consensus       236 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~---~~l~e~l~~~~~  286 (287)
T 2jl1_A          236 VN---AGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SL---TPLKETVKQALK  286 (287)
T ss_dssp             HH---TTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SC---CCHHHHHHHHHT
T ss_pred             Hh---CCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-CC---CCHHHHHHHHhc
Confidence            11   11111111111100011122334456789999999 44   499999998875

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.6e-39  Score=301.57  Aligned_cols=263  Identities=13%  Similarity=0.147  Sum_probs=213.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC-CCEEEECCCC-
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG-VHTVIDCATG-  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~-~d~Vi~~a~~-  158 (399)
                      |++|+||||| +||||++|++.|+++|++|++++|+.++.     ..+++++.+|++|.+++.+++++ +|+|||+|+. 
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            4467899999 59999999999999999999999985542     24789999999999999999987 9999999983 


Q ss_pred             -CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 015872          159 -RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQDSGLPHVII  224 (399)
Q Consensus       159 -~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~~g~~~~il  224 (399)
                       ..+..+.++|+.++.+++++|++.++++|||+||.+++.             .|.++|+.+|..+|++ ++. ++++++
T Consensus        75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~il  152 (286)
T 3gpi_A           75 EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTIL  152 (286)
T ss_dssp             HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEE
Confidence             345667789999999999999999999999999987643             2457899999999999 777 999999


Q ss_pred             ecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHH
Q 015872          225 RLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       225 Rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      ||+++||.....++..+.. ...+ ..++...+|+|++|+|++++.+++++  ...+++||+++++.+|+.|+++.+.+.
T Consensus       153 R~~~v~G~~~~~~~~~~~~-~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~  230 (286)
T 3gpi_A          153 RFSGIYGPGRLRMIRQAQT-PEQW-PARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADR  230 (286)
T ss_dssp             EECEEEBTTBCHHHHHTTC-GGGS-CSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHH
T ss_pred             ecccccCCCchhHHHHHHh-cccC-CCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHH
Confidence            9999998766555555555 4333 34466679999999999999999984  456889999999999999999999999


Q ss_pred             hCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc-cHHHHHHHHHHHH
Q 015872          303 AGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII-TLEKYLQDYFTNI  381 (399)
Q Consensus       303 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~-~lee~l~~~~~~~  381 (399)
                      +|.+.++...+.                              .......|+++++ +|||+|+  . +++|+|+++++|+
T Consensus       231 ~g~~~~~~~~~~------------------------------~~~~~~~d~~k~~-~lG~~p~--~~~l~e~l~~~~~~~  277 (286)
T 3gpi_A          231 QGIAYPAGATPP------------------------------VQGNKKLSNARLL-ASGYQLI--YPDYVSGYGALLAAM  277 (286)
T ss_dssp             TTCCCCCSCCCC------------------------------BCSSCEECCHHHH-HTTCCCS--SCSHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCcc------------------------------cCCCeEeeHHHHH-HcCCCCc--CCcHHHHHHHHHHHH
Confidence            998866543320                              1122336788997 8999998  6 6999999999999


Q ss_pred             HHhhH
Q 015872          382 LKKLK  386 (399)
Q Consensus       382 ~~~~~  386 (399)
                      ..+..
T Consensus       278 ~~~~~  282 (286)
T 3gpi_A          278 REGHH  282 (286)
T ss_dssp             TC---
T ss_pred             hcccc
Confidence            65543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=7.1e-39  Score=309.18  Aligned_cols=273  Identities=15%  Similarity=0.150  Sum_probs=220.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      .++|+|||||||||||++++++|+++|++|++++|+..+.. .....+++++++|++|.+++.++++++|+|||+|+...
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch-hhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            34689999999999999999999999999999999855432 23345789999999999999999999999999998432


Q ss_pred             --------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------------CCCCcHHHHHHHHHH
Q 015872          161 --------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       161 --------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~~y~~~K~~~E~  212 (399)
                              ....+++|+.++.+++++|++.++++|||+||.+++.                    .+..+|+.+|..+|+
T Consensus       106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~  185 (379)
T 2c5a_A          106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEE  185 (379)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHH
Confidence                    2344578999999999999999999999999986543                    235679999999999


Q ss_pred             HHH----hCCCCEEEEecCccccccc----------ccchhhhccccc---cccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          213 FLQ----DSGLPHVIIRLCGFMQGLI----------GQYAVPILEEKS---VWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       213 ~l~----~~g~~~~ilRp~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +++    +.|++++++||+++|+...          ..++..+..+..   +++ +++..++|+|++|+|++++.+++++
T Consensus       186 ~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          186 LCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWG-DGLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEES-CSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeC-CCCeeEEEEEHHHHHHHHHHHhhcc
Confidence            874    4699999999999997542          223334434432   233 3455669999999999999999876


Q ss_pred             ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccc
Q 015872          276 KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSE  355 (399)
Q Consensus       276 ~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (399)
                        .+++||+++++.+|+.|+++.+.+.+|.+.++..+|.+.               .             ......|+++
T Consensus       265 --~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~---------------~-------------~~~~~~d~~k  314 (379)
T 2c5a_A          265 --FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE---------------G-------------VRGRNSDNNL  314 (379)
T ss_dssp             --CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC---------------C-------------CSBCEECCHH
T ss_pred             --CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC---------------C-------------cccccCCHHH
Confidence              467999999999999999999999999988777665420               0             0112357789


Q ss_pred             cccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          356 TFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       356 ~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ++++|||+|+  ++++|+|+++++|++++.+.
T Consensus       315 ~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~  344 (379)
T 2c5a_A          315 IKEKLGWAPN--MRLKEGLRITYFWIKEQIEK  344 (379)
T ss_dssp             HHHHHSCCCC--CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCC--CCHHHHHHHHHHHHHHhHhh
Confidence            9999999998  79999999999999877654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2.9e-39  Score=303.38  Aligned_cols=276  Identities=16%  Similarity=0.220  Sum_probs=215.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC---
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP---  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~---  160 (399)
                      |+|||||||||||++|+++|+++|++|++++|+...... ....+++++.+|+.|.+ +.+++++ |+|||+|+...   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-FVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGG-GSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchh-hcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            579999999999999999999999999999998555433 23458999999999999 8888888 99999998321   


Q ss_pred             ----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh----CCC
Q 015872          161 ----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD----SGL  219 (399)
Q Consensus       161 ----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~----~g~  219 (399)
                          +...+++|+.++.+++++|++.++++|||+||.+++.             .|.++|+.+|..+|++++.    .|+
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~  157 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV  157 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence                2334568999999999999999999999999987642             3457899999999998754    699


Q ss_pred             CEEEEecCcccccccc-----cchhhhcccc-cc-ccCCCCcceeceeHHHHHHHHHHHHhC---CccCCcEEEEcCCCC
Q 015872          220 PHVIIRLCGFMQGLIG-----QYAVPILEEK-SV-WGTDALTRIAYMDTQDIARLTFVALRN---EKINGRTLTFSGPRA  289 (399)
Q Consensus       220 ~~~ilRp~~~~~~~~~-----~~~~~~~~~~-~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~---~~~~g~~~~l~~~~~  289 (399)
                      +++++||+++|+....     .++..+..+. .+ ....++..++|+|++|+|++++.++++   +...+++||+++++.
T Consensus       158 ~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          158 RCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             EEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             CEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            9999999999976432     2333444442 22 223345667999999999999999987   445678999999999


Q ss_pred             CCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCcccc
Q 015872          290 WTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIIT  369 (399)
Q Consensus       290 ~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~  369 (399)
                      +|+.|+++.+.+.+|.+.++..+|.....        ..++.             ....+..|.++++++|||+|+  ++
T Consensus       238 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~-------------~~~~~~~d~~k~~~~lG~~p~--~~  294 (312)
T 3ko8_A          238 VRVLDIAQIVAEVLGLRPEIRLVPSTPDG--------RGWPG-------------DVKYMTLAVTKLMKLTGWRPT--MT  294 (312)
T ss_dssp             EEHHHHHHHHHHHHTCCCEEEEC------------------C-------------CCSEECBCCHHHHHHHCCCCS--SC
T ss_pred             eeHHHHHHHHHHHhCCCCceeecCccccc--------cCCCC-------------CccccccCHHHHHHHhCCCCC--CC
Confidence            99999999999999998887776653210        00111             112234688999999999998  79


Q ss_pred             HHHHHHHHHHHHHHhh
Q 015872          370 LEKYLQDYFTNILKKL  385 (399)
Q Consensus       370 lee~l~~~~~~~~~~~  385 (399)
                      ++|+|+++++|++++.
T Consensus       295 ~~~~l~~~~~~~~~~~  310 (312)
T 3ko8_A          295 SAEAVKKTAEDLAKEL  310 (312)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            9999999999998654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=8.5e-39  Score=306.70  Aligned_cols=277  Identities=17%  Similarity=0.194  Sum_probs=218.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHH--CCCcEEEEecCCC------------CCccccccCCcEEEEccCCCCCcHHH
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALD--EGYDVRCLVRPRP------------APADFLRDWGATVVNADLSKPETIPA  144 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~--~g~~V~~~~r~~~------------~~~~~l~~~~v~~~~~Dl~d~~~l~~  144 (399)
                      +.+++|+||||||+||||++|++.|++  .|++|++++|+..            .....+...+++++.+|++|++++.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            356678999999999999999999999  9999999999754            22223334468999999999999999


Q ss_pred             H-hcCCCEEEECCCC-----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC------------CCCCcHHHH
Q 015872          145 T-LVGVHTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------HPEVPLMEI  206 (399)
Q Consensus       145 ~-~~~~d~Vi~~a~~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~------------~~~~~y~~~  206 (399)
                      + ..++|+|||+|+.     ..+...+++|+.++.+++++|++.+++ |||+||.+++.            .|.++|+.+
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~s  164 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFS  164 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHH
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHH
Confidence            8 7899999999993     233455679999999999999999986 99999976643            244679999


Q ss_pred             HHHHHHHHHhCC--CCEEEEecCcccccccc----------cchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHh
Q 015872          207 KYCTEQFLQDSG--LPHVIIRLCGFMQGLIG----------QYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       207 K~~~E~~l~~~g--~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      |..+|++++...  ++++++||+++|+....          .++..+..+..+.. .+++..++|+|++|+|++++.+++
T Consensus       165 K~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~  244 (362)
T 3sxp_A          165 KLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK  244 (362)
T ss_dssp             HHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh
Confidence            999999998765  88999999999965422          23334444443322 233566799999999999999999


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                      ++. .| +||+++++.+|+.|+++.+.+.+| +.++...|.+.             ..             ....+..|+
T Consensus       245 ~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~-------------~~-------------~~~~~~~d~  295 (362)
T 3sxp_A          245 AQK-SG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY-------------AF-------------FQKHTQAHI  295 (362)
T ss_dssp             CSS-CE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC---------------------------------CCCCBCC
T ss_pred             cCC-CC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC-------------cC-------------cccceecCH
Confidence            875 46 999999999999999999999999 77777766431             00             112234678


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ++++++|||+|.  ++++|+|+++++|+++.++.
T Consensus       296 ~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~  327 (362)
T 3sxp_A          296 EPTILDLDYTPL--YDLESGIKDYLPHIHAIFKG  327 (362)
T ss_dssp             HHHHHHHCCCCC--CCHHHHHHHHHHHHTCC---
T ss_pred             HHHHHHhCCCCC--CCHHHHHHHHHHHHHHHhhc
Confidence            999999999998  79999999999999876654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-39  Score=308.52  Aligned_cols=275  Identities=18%  Similarity=0.234  Sum_probs=218.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      +|+||||||+||||++++++|+++|++|++++|+.......+.      ..+++++++|++|++++.++++  ++|+|||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   84 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH   84 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence            5789999999999999999999999999999997655433221      2478999999999999999998  8999999


Q ss_pred             CCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------CCCcHHHHHHHHHHHH
Q 015872          155 CATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFL  214 (399)
Q Consensus       155 ~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l  214 (399)
                      +|+...       ....+++|+.++.+++++|++.++++||++||.+++..             +..+|+.+|..+|+++
T Consensus        85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  164 (341)
T 3enk_A           85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQIL  164 (341)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHH
T ss_pred             CccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            998432       23456789999999999999999999999999776432             3368999999999988


Q ss_pred             Hh----C-CCCEEEEecCcccccccc------------c---chhhhcccc----ccccC-----CCCcceeceeHHHHH
Q 015872          215 QD----S-GLPHVIIRLCGFMQGLIG------------Q---YAVPILEEK----SVWGT-----DALTRIAYMDTQDIA  265 (399)
Q Consensus       215 ~~----~-g~~~~ilRp~~~~~~~~~------------~---~~~~~~~~~----~~~~~-----~~~~~~~~v~v~Dva  265 (399)
                      +.    . +++++++||+++|+....            .   ++.....+.    .+++.     +++..++|+|++|+|
T Consensus       165 ~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  244 (341)
T 3enk_A          165 RDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLA  244 (341)
T ss_dssp             HHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHH
Confidence            54    3 599999999999975321            1   112222221    22331     446667999999999


Q ss_pred             HHHHHHHhC--CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 015872          266 RLTFVALRN--EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVL  343 (399)
Q Consensus       266 ~~i~~~l~~--~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
                      ++++.++++  +...+++||+++++.+|+.|+++.+.+.+|.+.++...+...              .            
T Consensus       245 ~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~------------  298 (341)
T 3enk_A          245 RGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRP--------------G------------  298 (341)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCT--------------T------------
T ss_pred             HHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCC--------------C------------
Confidence            999999987  335688999999999999999999999999988877665320              1            


Q ss_pred             ccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          344 TSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       344 ~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                       ....+..|.++++++|||+|+  ++++|+|+++++|++++.+
T Consensus       299 -~~~~~~~d~~k~~~~lG~~p~--~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          299 -DVAECYANPAAAAETIGWKAE--RDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             -CCSEECBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHSTT
T ss_pred             -CccccccCHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCc
Confidence             111234678999999999998  7999999999999987643

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=6.9e-39  Score=309.06  Aligned_cols=281  Identities=15%  Similarity=0.136  Sum_probs=221.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +.+|+|||||||||||+++++.|+++| ++|++++|+.......+. ..+++++.+|++|++++.++++++|+|||+|+.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            446799999999999999999999999 999999998655433333 457899999999999999999999999999994


Q ss_pred             C-------CCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCC-------------------CCCCcHHHHHHHHH
Q 015872          159 R-------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK-------------------HPEVPLMEIKYCTE  211 (399)
Q Consensus       159 ~-------~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~-------------------~~~~~y~~~K~~~E  211 (399)
                      .       ++..+.++|+.++.+++++|++. ++++|||+||..++.                   .+..+|+.+|..+|
T Consensus       110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E  189 (377)
T 2q1s_A          110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE  189 (377)
T ss_dssp             SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence            3       23445678999999999999999 999999999976421                   34578999999999


Q ss_pred             HHHHh----CCCCEEEEecCccccccc---------c------c----chhhhccccccc-cCCCCcceeceeHHHHHHH
Q 015872          212 QFLQD----SGLPHVIIRLCGFMQGLI---------G------Q----YAVPILEEKSVW-GTDALTRIAYMDTQDIARL  267 (399)
Q Consensus       212 ~~l~~----~g~~~~ilRp~~~~~~~~---------~------~----~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~  267 (399)
                      +++++    .|++++++||+++|+...         .      .    ++..+..+..+. ..+++..++|+|++|+|++
T Consensus       190 ~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a  269 (377)
T 2q1s_A          190 FYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANG  269 (377)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence            98854    589999999999997543         1      1    222333444332 2234566799999999999


Q ss_pred             -HHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccC
Q 015872          268 -TFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSD  346 (399)
Q Consensus       268 -i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (399)
                       ++.+++++. .| +||+++++.+|+.|+++.+.+.+|.+.++...|..              +.+.           . 
T Consensus       270 ~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------------~~~~-----------~-  321 (377)
T 2q1s_A          270 LIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKR--------------PWDN-----------S-  321 (377)
T ss_dssp             HHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC--------------GGGC-----------C-
T ss_pred             HHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC--------------cccc-----------c-
Confidence             999998865 56 99999999999999999999999988766555421              0000           0 


Q ss_pred             ccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhhh
Q 015872          347 TVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQ  391 (399)
Q Consensus       347 ~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~  391 (399)
                      ..+..|+++++++|||+|+  ++++|+|+++++|++++..+....
T Consensus       322 ~~~~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~~~~~  364 (377)
T 2q1s_A          322 GKRFGSPEKARRELGFSAD--VSIDDGLRKTIEWTKANLAVIEQI  364 (377)
T ss_dssp             -CCCCCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccCHHHHHHHcCCCCC--CCHHHHHHHHHHHHHHhhhhhhhe
Confidence            1234678999999999998  799999999999998887664443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-38  Score=297.65  Aligned_cols=274  Identities=15%  Similarity=0.241  Sum_probs=209.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC---
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR---  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~---  159 (399)
                      ||+|||||||||||++|+++|+++| .|+++++........+ ..+++++.+|++| +++.++++++|+|||+|+..   
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-NEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-CTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-CCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            3689999999999999999999999 5666665434333322 4578999999999 99999999999999999832   


Q ss_pred             ----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHH----hCC
Q 015872          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQ----DSG  218 (399)
Q Consensus       160 ----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~----~~g  218 (399)
                          .+....++|+.++.+++++|++.++++|||+||.+++.             .+..+|+.+|..+|.+++    +.|
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g  157 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFD  157 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence                22345678999999999999999999999999987642             345779999999999874    479


Q ss_pred             CCEEEEecCcccccccc-----cchhhhcccc-cc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCC
Q 015872          219 LPHVIIRLCGFMQGLIG-----QYAVPILEEK-SV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWT  291 (399)
Q Consensus       219 ~~~~ilRp~~~~~~~~~-----~~~~~~~~~~-~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s  291 (399)
                      ++++++||+++||....     .++..+..+. .+ ..+.++..++|+|++|+|++++.+++.. ..+++||+++++.+|
T Consensus       158 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~~~~~~s  236 (313)
T 3ehe_A          158 MQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIGSEDQIK  236 (313)
T ss_dssp             CEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECCCSCCEE
T ss_pred             CCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEECCCCCee
Confidence            99999999999975432     2334444442 22 2233456679999999999999999843 457899999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHH
Q 015872          292 TQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLE  371 (399)
Q Consensus       292 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~le  371 (399)
                      +.|+++.+.+.+|.+.++...+....           +..+             ...+..|++++ +.|||+|+  ++++
T Consensus       237 ~~e~~~~i~~~~g~~~~~~~~~~~~~-----------~~~~-------------~~~~~~d~~k~-~~lG~~p~--~~~~  289 (313)
T 3ehe_A          237 VKRIAEIVCEELGLSPRFRFTGGDRG-----------WKGD-------------VPVMLLSIEKL-KRLGWKPR--YNSE  289 (313)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEC------------------------------------CCBCCHHH-HHHTCCCS--CCHH
T ss_pred             HHHHHHHHHHHhCCCCceEECCCccC-----------Cccc-------------cceeccCHHHH-HHcCCCCC--CCHH
Confidence            99999999999999877665442110           0111             01123577888 45999998  7999


Q ss_pred             HHHHHHHHHHHHhhHH
Q 015872          372 KYLQDYFTNILKKLKD  387 (399)
Q Consensus       372 e~l~~~~~~~~~~~~~  387 (399)
                      |+|+++++|++++.+.
T Consensus       290 e~l~~~~~~~~~~~~~  305 (313)
T 3ehe_A          290 EAVRMAVRDLVEDLDE  305 (313)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCccc
Confidence            9999999999876655

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.1e-38  Score=295.60  Aligned_cols=282  Identities=20%  Similarity=0.254  Sum_probs=213.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      +||||||||+||+++++.|+++  |++|++++|+..+. ..+...+++++.+|++|++++.++++++|+|||+++...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            4899999999999999999999  99999999985543 333445789999999999999999999999999998432  


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhhc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPIL  242 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~  242 (399)
                         ..|+.++.+++++|++.++++||++||.+++. ...+|+.+|..+|+++++.+++++++||+.++++.. .++....
T Consensus        78 ---~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~-~~~~~~~  152 (286)
T 2zcu_A           78 ---GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-SPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYL-ASAPAAL  152 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETTTTT-CCSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHH-TTHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-CcchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhH-HHhHHhh
Confidence               25788999999999999999999999998874 446899999999999999999999999987776543 2333333


Q ss_pred             cccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHH
Q 015872          243 EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ  322 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~  322 (399)
                      .++.+....++..++++|++|+|++++.+++++...|++||+++++.+|+.|+++.+.+.+|.+.++..+|.+.......
T Consensus       153 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~  232 (286)
T 2zcu_A          153 EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALK  232 (286)
T ss_dssp             HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHT
T ss_pred             cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHH
Confidence            33333233345667999999999999999998766788999999989999999999999999999888888776543221


Q ss_pred             Hhhhhhhhhhhhhhhhh-hhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHH
Q 015872          323 LTRFFEWTNDVADRLAF-SEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNI  381 (399)
Q Consensus       323 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~  381 (399)
                      .   .+.+......+.. ...+ ....+..+.++++++|||+|.   +++|+|+++++|+
T Consensus       233 ~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~~---~~~e~l~~~~~~~  285 (286)
T 2zcu_A          233 S---VGLPDGLADMLADSDVGA-SKGGLFDDSKTLSKLIGHPTT---TLAESVSHLFNVN  285 (286)
T ss_dssp             T---SSCCHHHHHHHHHHHHHH-HTTTTCCCCCHHHHHHTSCCC---CHHHHHHGGGC--
T ss_pred             H---cCCCHHHHHHHHHHHHHH-hCCCCccCchHHHHHhCcCCC---CHHHHHHHHHhhc
Confidence            0   0111111111110 1111 122334567889899998665   9999999998886

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.3e-38  Score=301.25  Aligned_cols=274  Identities=17%  Similarity=0.294  Sum_probs=215.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      ||+||||||+||||++++++|+++|++|++++|+.......+.. +++++++|++|.+++.++++  ++|+|||+|+...
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT-TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC-CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            36899999999999999999999999999999975543333332 78999999999999999998  9999999998432


Q ss_pred             -------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh----
Q 015872          161 -------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD----  216 (399)
Q Consensus       161 -------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~----  216 (399)
                             .....++|+.++.+++++|++.++++||++||.+++.             .+..+|+.+|..+|++++.    
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA  159 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence                   3345678999999999999999999999999987643             2357899999999998854    


Q ss_pred             CCCCEEEEecCccccccc-----------ccch---hh-hcccc---cccc-----CCCCcceeceeHHHHHHHHHHHHh
Q 015872          217 SGLPHVIIRLCGFMQGLI-----------GQYA---VP-ILEEK---SVWG-----TDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~-----------~~~~---~~-~~~~~---~~~~-----~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .|++++++||+++|+...           ..++   .. .....   .+++     .+++..++|+|++|+|++++.+++
T Consensus       160 ~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~  239 (330)
T 2c20_A          160 SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLK  239 (330)
T ss_dssp             SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred             hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHh
Confidence            589999999999997531           1111   11 11111   2333     134567799999999999999998


Q ss_pred             CCcc--CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          274 NEKI--NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       274 ~~~~--~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      ++..  .+++||+++++.+|+.|+++.+.+.+|.+.++...+..              +.             ....+..
T Consensus       240 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~-------------~~~~~~~  292 (330)
T 2c20_A          240 DLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR--------------AG-------------DPARLVA  292 (330)
T ss_dssp             HHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC--------------SS-------------CCSEECB
T ss_pred             ccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC--------------CC-------------ccccccc
Confidence            7532  36899999999999999999999999988776655421              00             1112346


Q ss_pred             cccccccccCCCCCccc-cHHHHHHHHHHHHHHhhH
Q 015872          352 PMSETFDLLGVDAKDII-TLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~-~lee~l~~~~~~~~~~~~  386 (399)
                      |+++++++|||+|+  + +++|+|+++++|++++.+
T Consensus       293 d~~k~~~~lG~~p~--~~~l~~~l~~~~~~~~~~~~  326 (330)
T 2c20_A          293 SSQKAKEKLGWDPR--YVNVKTIIEHAWNWHQKQPN  326 (330)
T ss_dssp             CCHHHHHHHCCCCS--CCCHHHHHHHHHHHHHHCSS
T ss_pred             CHHHHHHHhCCCCc--cCCHHHHHHHHHHHHHHhhh
Confidence            78899999999998  7 899999999999976553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.2e-38  Score=302.67  Aligned_cols=276  Identities=13%  Similarity=0.135  Sum_probs=216.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----------cCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----------~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +++|+|||||||||||+++++.|+++|++|++++|+.......+.          ..+++++++|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            456899999999999999999999999999999997543221111          2478999999999999999999999


Q ss_pred             EEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHH
Q 015872          151 TVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCT  210 (399)
Q Consensus       151 ~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~  210 (399)
                      +|||+|+...       +....++|+.++.+++++|++.++++|||+||.+++.             .+..+|+.+|..+
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            9999999432       3345678999999999999999999999999987643             2457899999999


Q ss_pred             HHHHH----hCCCCEEEEecCcccccccc----------cchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhC-
Q 015872          211 EQFLQ----DSGLPHVIIRLCGFMQGLIG----------QYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRN-  274 (399)
Q Consensus       211 E~~l~----~~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~-  274 (399)
                      |++++    +.|++++++||+++|+....          .++..+..+..+ ..++++..++|+|++|+|++++.++.+ 
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~  264 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG  264 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence            99884    45999999999999975432          122334444433 223345667999999999999999987 


Q ss_pred             CccCCcEEEEcCCCCCCHHHHHHHHHHHh---CCCCCeee--cCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccc
Q 015872          275 EKINGRTLTFSGPRAWTTQEVITLCERLA---GQDANVTM--VPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVF  349 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~s~~e~~~~~~~~~---g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (399)
                      +...+++||+++++.+|+.|+++.+.+.+   |.+.+...  .+..              +.             .....
T Consensus       265 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~--------------~~-------------~~~~~  317 (352)
T 1sb8_A          265 LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR--------------EG-------------DVRHS  317 (352)
T ss_dssp             GGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCC--------------TT-------------CCSBC
T ss_pred             ccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCC--------------cc-------------chhhc
Confidence            34467899999999999999999999999   98765321  1100              00             01123


Q ss_pred             cccccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          350 SVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       350 ~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      ..|+++++++|||+|+  ++++|+|+++++|++++.
T Consensus       318 ~~d~~k~~~~lG~~p~--~~~~e~l~~~~~~~~~~~  351 (352)
T 1sb8_A          318 LADISKAAKLLGYAPK--YDVSAGVALAMPWYIMFL  351 (352)
T ss_dssp             CBCCHHHHHHTCCCCC--CCHHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhc
Confidence            3678999999999998  799999999999997653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=3.3e-38  Score=297.40  Aligned_cols=267  Identities=13%  Similarity=0.156  Sum_probs=213.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCCCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR-  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~~~-  159 (399)
                      .|+|||||||||||+++++.|+++|++|++++|+... .. +   +++++.+|++|++++.+++++  +|+|||+|+.. 
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   86 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P---NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS   86 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T---TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence            5789999999999999999999999999999998554 22 2   789999999999999999986  99999999943 


Q ss_pred             ------CCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCC---------------CCCCcHHHHHHHHHHHHHh-
Q 015872          160 ------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK---------------HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       160 ------~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~---------------~~~~~y~~~K~~~E~~l~~-  216 (399)
                            ......++|+.++.+++++|++. ++++||++||..++.               .+..+|+.+|..+|++++. 
T Consensus        87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~  166 (321)
T 2pk3_A           87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQY  166 (321)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence                  23446679999999999999887 689999999986543               3457899999999998865 


Q ss_pred             ---CCCCEEEEecCcccccccc------cchhhhcc---c--cc--cccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          217 ---SGLPHVIIRLCGFMQGLIG------QYAVPILE---E--KS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       217 ---~g~~~~ilRp~~~~~~~~~------~~~~~~~~---~--~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                         .|++++++||+++|+....      .+...+..   +  ..  +++ .++...+++|++|+|++++.+++++ ..|+
T Consensus       167 ~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~-~~g~  244 (321)
T 2pk3_A          167 VKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVG-NLEAVRDFTDVRDIVQAYWLLSQYG-KTGD  244 (321)
T ss_dssp             HHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEES-CSSCEEEEEEHHHHHHHHHHHHHHC-CTTC
T ss_pred             HHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeC-CCCcEEeeEEHHHHHHHHHHHHhCC-CCCC
Confidence               3999999999999975432      22233333   3  22  233 3455669999999999999999876 3578


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      +||+++++.+|+.|+++.+.+.+|.+.++...|..              ...           .....+..|+++++++|
T Consensus       245 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------------~~~-----------~~~~~~~~d~~k~~~~l  299 (321)
T 2pk3_A          245 VYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ--------------LRP-----------SEVPTLIGSNKRLKDST  299 (321)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG--------------CCS-----------SCCSBCCBCCHHHHHHH
T ss_pred             eEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc--------------CCC-----------cccchhccCHHHHHHHc
Confidence            99999999999999999999999988776655421              000           01123446789999999


Q ss_pred             CCCCCccccHHHHHHHHHHHHHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~  383 (399)
                      ||+|+  ++++|+|+++++|+++
T Consensus       300 G~~p~--~~~~e~l~~~~~~~~~  320 (321)
T 2pk3_A          300 GWKPR--IPLEKSLFEILQSYRQ  320 (321)
T ss_dssp             CCCCC--SCHHHHHHHHHHHHHT
T ss_pred             CCCcC--CCHHHHHHHHHHHHhc
Confidence            99998  7999999999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.2e-38  Score=303.18  Aligned_cols=277  Identities=13%  Similarity=0.110  Sum_probs=215.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhcC--CCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVG--VHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~  155 (399)
                      ++|+||||||+||||++|+++|+++|++|++++|+..+......    ..+++++++|++|++++.+++++  +|+|||+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            45789999999999999999999999999999997554332211    23789999999999999999986  8999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC--------------CCCCcHHHHHHHHHHH
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~  213 (399)
                      |+..       ......++|+.++.+++++|.+.+ +++|||+||..++.              .+..+|+.+|..+|++
T Consensus        88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  167 (357)
T 1rkx_A           88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  167 (357)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            9832       223456789999999999999987 89999999986431              2456799999999998


Q ss_pred             HHhC-------------CCCEEEEecCccccccc-------ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          214 LQDS-------------GLPHVIIRLCGFMQGLI-------GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       214 l~~~-------------g~~~~ilRp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      ++..             |++++++||+++|+...       ..++..+..+..+...+++..++|+|++|+|++++.+++
T Consensus       168 ~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          168 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHH
Confidence            8542             99999999999997432       223333444554433345667799999999999999987


Q ss_pred             C----CccCCcEEEEcCC--CCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCc
Q 015872          274 N----EKINGRTLTFSGP--RAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDT  347 (399)
Q Consensus       274 ~----~~~~g~~~~l~~~--~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (399)
                      +    +...+++||++++  +.+|+.|+++.+.+.+|.+.++...+..  +           +.             ...
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~-----------~~-------------~~~  301 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA--H-----------PH-------------EAH  301 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------CCC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC--C-----------Cc-------------Ccc
Confidence            4    2345789999974  5799999999999999988765432210  0           00             112


Q ss_pred             cccccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          348 VFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       348 ~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      .+..|+++++++|||+|+  ++++|+|+++++|+.+...
T Consensus       302 ~~~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~  338 (357)
T 1rkx_A          302 YLKLDCSKAKMQLGWHPR--WNLNTTLEYIVGWHKNWLS  338 (357)
T ss_dssp             CCCBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHT
T ss_pred             cccCCHHHHHHHhCCCcC--CcHHHHHHHHHHHHHHHhc
Confidence            234678999999999998  7999999999999987654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.3e-38  Score=295.46  Aligned_cols=266  Identities=20%  Similarity=0.232  Sum_probs=210.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~-  160 (399)
                      |+||||||+||||++++++|+++|++|++++|........+. .+++++++|++|++++.++++  ++|+|||+|+... 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            479999999999999999999999999999985443322222 367899999999999999998  8999999998432 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEeccc-CCCC--------------CCCCcHHHHHHHHHHHHH----
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH-NCDK--------------HPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~-~~~~--------------~~~~~y~~~K~~~E~~l~----  215 (399)
                            +....++|+.++.+++++|++.++++||++||. .++.              .+..+|+.+|..+|++++    
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  159 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQ  159 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence                  234567899999999999999999999999997 3221              245789999999999874    


Q ss_pred             hCCCCEEEEecCcccccccc---------cchhhhccccc--ccc----CCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          216 DSGLPHVIIRLCGFMQGLIG---------QYAVPILEEKS--VWG----TDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~~--~~~----~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                      +.|++++++||+++|+....         .++..+..+..  ++.    .++....+|+|++|+|++++.+++++   ++
T Consensus       160 ~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~~  236 (311)
T 2p5y_A          160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---EG  236 (311)
T ss_dssp             HHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---CE
T ss_pred             HcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---CC
Confidence            46899999999999975421         22333334443  230    23355569999999999999999875   78


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      +||+++++.+|+.|+++.+.+.+|.+.++...|..              +.+             ...+..|++++++ |
T Consensus       237 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~~-------------~~~~~~d~~k~~~-l  288 (311)
T 2p5y_A          237 IYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR--------------PGD-------------LERSVLSPLKLMA-H  288 (311)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC--------------TTC-------------CSBCCBCCHHHHT-T
T ss_pred             EEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC--------------ccc-------------hhhccCCHHHHHH-C
Confidence            99999999999999999999999988777665532              000             1123467899999 9


Q ss_pred             CCCCCccccHHHHHHHHHHHHHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~  383 (399)
                      ||+|+  ++++|+|+++++|+++
T Consensus       289 g~~p~--~~~~~~l~~~~~~~~~  309 (311)
T 2p5y_A          289 GWRPK--VGFQEGIRLTVDHFRG  309 (311)
T ss_dssp             TCCCS--SCHHHHHHHHHHHHHT
T ss_pred             CCCCC--CCHHHHHHHHHHHHHh
Confidence            99998  7999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=7.1e-38  Score=298.46  Aligned_cols=276  Identities=18%  Similarity=0.252  Sum_probs=214.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC------Cccc---c---ccCCcEEEEccCCCCCcHHHHhc--C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------PADF---L---RDWGATVVNADLSKPETIPATLV--G  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~------~~~~---l---~~~~v~~~~~Dl~d~~~l~~~~~--~  148 (399)
                      +|+||||||+||||++++++|+++|++|++++|....      ....   +   ...+++++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4789999999999999999999999999999986433      1111   1   12468999999999999999998  8


Q ss_pred             CCEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CC-CCcHHHHH
Q 015872          149 VHTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HP-EVPLMEIK  207 (399)
Q Consensus       149 ~d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~-~~~y~~~K  207 (399)
                      +|+|||+|+..       .+....++|+.++.+++++|++.++++||++||.+++.             .| ..+|+.+|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            99999999843       23345678999999999999999999999999987643             23 57899999


Q ss_pred             HHHHHHHHh---CC--CCEEEEecCccccccc------------ccch---hhhc--ccc--ccccC-----CCCcceec
Q 015872          208 YCTEQFLQD---SG--LPHVIIRLCGFMQGLI------------GQYA---VPIL--EEK--SVWGT-----DALTRIAY  258 (399)
Q Consensus       208 ~~~E~~l~~---~g--~~~~ilRp~~~~~~~~------------~~~~---~~~~--~~~--~~~~~-----~~~~~~~~  258 (399)
                      ..+|++++.   .+  ++++++||+++|+...            ..++   ....  .+.  .+++.     +++..++|
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  241 (348)
T 1ek6_A          162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY  241 (348)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred             HHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEee
Confidence            999998854   24  9999999999996521            1111   1111  222  23331     34566799


Q ss_pred             eeHHHHHHHHHHHHhCCc-cCC-cEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhh
Q 015872          259 MDTQDIARLTFVALRNEK-ING-RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADR  336 (399)
Q Consensus       259 v~v~Dva~~i~~~l~~~~-~~g-~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (399)
                      +|++|+|++++.+++++. ..+ ++||+++++.+|+.|+++.+.+.+|.+.++...+..              +.     
T Consensus       242 i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~-----  302 (348)
T 1ek6_A          242 IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR--------------EG-----  302 (348)
T ss_dssp             EEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC--------------TT-----
T ss_pred             EEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC--------------Cc-----
Confidence            999999999999998752 334 899999999999999999999999988776655421              00     


Q ss_pred             hhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          337 LAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                              ....+..|+++++++|||+|+  ++++|+|+++++|++++...
T Consensus       303 --------~~~~~~~d~~k~~~~lG~~p~--~~l~~~l~~~~~w~~~~~~~  343 (348)
T 1ek6_A          303 --------DVAACYANPSLAQEELGWTAA--LGLDRMCEDLWRWQKQNPSG  343 (348)
T ss_dssp             --------CCSEECBCCHHHHHTTCCCCC--CCHHHHHHHHHHHHHHCTTC
T ss_pred             --------cchhhccCHHHHHHhcCCCCC--CCHHHHHHHHHHHHHhcccc
Confidence                    011234678999999999998  79999999999999876443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=4.1e-37  Score=291.81  Aligned_cols=275  Identities=17%  Similarity=0.180  Sum_probs=212.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCC-Cccccc----cCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PADFLR----DWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +.|+||||||+||||++++++|+++|  ++|++++|.... ....+.    ..+++++.+|++|.+++.+++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            45789999999999999999999996  999999996421 112221    23688999999999999999999999999


Q ss_pred             CCCCC-------CCCcchhccHHHHHHHHHHHHHcCC-cEEEEecccCCCC-------------CCCCcHHHHHHHHHHH
Q 015872          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       155 ~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v-~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~  213 (399)
                      +|+..       ....+.++|+.++.+++++|.+.+. ++||++||..++.             .+..+|+.+|..+|++
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  161 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDML  161 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence            99943       3445678999999999999999875 6999999976532             3456899999999998


Q ss_pred             HHh----CCCCEEEEecCcccccccc------cchhhhccccc--cccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          214 LQD----SGLPHVIIRLCGFMQGLIG------QYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       214 l~~----~g~~~~ilRp~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      ++.    .|++++++||+++|+....      .++..+..+..  +++. ++...+++|++|+|++++.+++++. .|++
T Consensus       162 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          162 VLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGT-GKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC----CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCC-CCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            753    6999999999999975432      22333444443  2333 3455699999999999999998754 5789


Q ss_pred             EEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          282 LTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      ||+++++.+|+.|+++.+.+.+|.+.+ +...+..              +             ..+..+..|+++++++|
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~-------------~~~~~~~~d~~k~~~~l  292 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVEDR--------------P-------------GHDLRYSLDSWKITRDL  292 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCC--------------T-------------TCCCCCCBCCHHHHHHH
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcccccccCCC--------------C-------------CchhhhcCCHHHHHHHh
Confidence            999999999999999999999998653 2221110              0             01123446789999999


Q ss_pred             CCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ||+|.  ++++|+|+++++|++++.+.
T Consensus       293 G~~p~--~~~~~~l~~~~~~~~~~~~~  317 (336)
T 2hun_A          293 KWRPK--YTFDEGIKKTIDWYLKNEWW  317 (336)
T ss_dssp             CCCCS--SCHHHHHHHHHHHHHHTHHH
T ss_pred             CCCCC--CCHHHHHHHHHHHHHhCccc
Confidence            99998  79999999999999877544

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=7e-38  Score=298.22  Aligned_cols=276  Identities=18%  Similarity=0.268  Sum_probs=214.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----ccccc-CCcEEEEccCCCCCcHHHHhcC--CCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRD-WGATVVNADLSKPETIPATLVG--VHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~-~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~  155 (399)
                      ||+|||||||||||+++++.|+++|++|++++|......    ..+.. .+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            368999999999999999999999999999998532211    11222 2589999999999999999988  9999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCCC-----------------------------C
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDK-----------------------------H  198 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~~-----------------------------~  198 (399)
                      |+..       .+...+++|+.++.+++++|++.+++ +||++||.+++.                             .
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            9943       23445679999999999999999986 999999976532                             2


Q ss_pred             CCCcHHHHHHHHHHHHHh----CCCCEEEEecCccccccc---------ccchhhhcccc-----cc-ccCCCCcceece
Q 015872          199 PEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLI---------GQYAVPILEEK-----SV-WGTDALTRIAYM  259 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~---------~~~~~~~~~~~-----~~-~~~~~~~~~~~v  259 (399)
                      +..+|+.+|..+|+++++    .|++++++||+++|+...         ..++..+..+.     ++ ..++++..++|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            446799999999998855    489999999999997542         12223333332     22 123346667999


Q ss_pred             eHHHHHHHHHHHHhC-CccCCcEEEEcCCC--CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhh
Q 015872          260 DTQDIARLTFVALRN-EKINGRTLTFSGPR--AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADR  336 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~-~~~~g~~~~l~~~~--~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (399)
                      |++|+|++++.++++ +...|++||+++++  .+|+.|+++.+.+.+|.+.++...|..              +.     
T Consensus       241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~-----  301 (347)
T 1orr_A          241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR--------------ES-----  301 (347)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC--------------SS-----
T ss_pred             EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCC--------------CC-----
Confidence            999999999999986 33467899999986  499999999999999998877765521              00     


Q ss_pred             hhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          337 LAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                              ....+..|+++++++|||+|+  ++++|+|+++++|+++++..
T Consensus       302 --------~~~~~~~d~~k~~~~lG~~p~--~~~~e~l~~~~~~~~~~~~~  342 (347)
T 1orr_A          302 --------DQRVFVADIKKITNAIDWSPK--VSAKDGVQKMYDWTSSILEH  342 (347)
T ss_dssp             --------CCSEECBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHC---
T ss_pred             --------CcceeecCHHHHHHHHCCCcc--CCHHHHHHHHHHHHHHHHHh
Confidence                    112234678999999999998  79999999999999887654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.2e-37  Score=293.50  Aligned_cols=273  Identities=15%  Similarity=0.173  Sum_probs=214.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcC--CCEEEECC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVG--VHTVIDCA  156 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a  156 (399)
                      .+++|+|||||||||||++++++|+++|++|++++|+.......+.. .+++++.+|++|++++.+++++  +|+|||+|
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            34468999999999999999999999999999999975443333332 4789999999999999999987  99999999


Q ss_pred             CCCCC---Ccc-hhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CCC-CcHHHHHHHHHHHHHh-
Q 015872          157 TGRPE---EPI-KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPE-VPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       157 ~~~~~---~~~-~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~-~~y~~~K~~~E~~l~~-  216 (399)
                      +....   ... .++|+.++.+++++|.+.++++||++||.+++.              .|. .+|+.+|..+|++++. 
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s  177 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS  177 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhh
Confidence            94332   111 578999999999999999999999999988765              455 8999999999999988 


Q ss_pred             CCCCEEEEecCcccccc-----cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCC
Q 015872          217 SGLPHVIIRLCGFMQGL-----IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWT  291 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s  291 (399)
                      .. +++++||+++|+..     +..++..+..+..+++  ++...++++++|+|++++.+++++.  +++||+++++.+|
T Consensus       178 ~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~~s  252 (333)
T 2q1w_A          178 GL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV--TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSGTDVA  252 (333)
T ss_dssp             TC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE--EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCSCCEE
T ss_pred             hC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC--CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCCCCcc
Confidence            76 99999999999754     2223333333333343  3555699999999999999998865  7899999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHH
Q 015872          292 TQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLE  371 (399)
Q Consensus       292 ~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~le  371 (399)
                      +.|+++.+.+.+|.+ ++..+|...               +..      ..+  ...+..|+++++++ ||+|.  ++++
T Consensus       253 ~~e~~~~i~~~~g~~-~~~~~~~~~---------------~~~------~~~--~~~~~~d~~k~~~~-G~~p~--~~~~  305 (333)
T 2q1w_A          253 IKELYDAVVEAMALP-SYPEPEIRE---------------LGP------DDA--PSILLDPSRTIQDF-GKIEF--TPLK  305 (333)
T ss_dssp             HHHHHHHHHHHTTCS-SCCCCEEEE---------------CCT------TSC--CCCCBCCHHHHHHH-CCCCC--CCHH
T ss_pred             HHHHHHHHHHHhCCC-CceeCCCCC---------------ccc------ccc--cccccCCHHHHHhc-CCCcC--CCHH
Confidence            999999999999987 554443220               000      000  12234677899888 99998  7999


Q ss_pred             HHHHHHHHHHHHh
Q 015872          372 KYLQDYFTNILKK  384 (399)
Q Consensus       372 e~l~~~~~~~~~~  384 (399)
                      |+|+++++|+++.
T Consensus       306 ~~l~~~~~~~~~~  318 (333)
T 2q1w_A          306 ETVAAAVAYFREY  318 (333)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.9e-38  Score=297.97  Aligned_cols=266  Identities=13%  Similarity=0.028  Sum_probs=208.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~  157 (399)
                      .|++|+|||||||||||++|+++|+++|+      +. ..     ...+++.+++|++|++.+.+++++  +|+|||+|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~   70 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LP-GE-----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAA   70 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-TC-----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-cc-----cccccCceecccCCHHHHHHHHhhcCCCEEEECce
Confidence            35678999999999999999999999998      21 11     112455568999999999999986  999999998


Q ss_pred             CCC--------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-----------------CCC-cHHHHHHHHH
Q 015872          158 GRP--------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----------------PEV-PLMEIKYCTE  211 (399)
Q Consensus       158 ~~~--------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-----------------~~~-~y~~~K~~~E  211 (399)
                      ...        +..+.++|+.++.+++++|++.++++|||+||..++..                 |.. +|+.+|..+|
T Consensus        71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E  150 (319)
T 4b8w_A           71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMID  150 (319)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHH
T ss_pred             ecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHH
Confidence            532        23456899999999999999999999999999876432                 222 5999999999


Q ss_pred             HHHHh----CCCCEEEEecCcccccccc----------cchhh----hccccccc-cCCCCcceeceeHHHHHHHHHHHH
Q 015872          212 QFLQD----SGLPHVIIRLCGFMQGLIG----------QYAVP----ILEEKSVW-GTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       212 ~~l~~----~g~~~~ilRp~~~~~~~~~----------~~~~~----~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ++++.    .+++++++||+++||....          .++..    +..+..+. ..+++..++|+|++|+|++++.++
T Consensus       151 ~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  230 (319)
T 4b8w_A          151 VQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVL  230 (319)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHH
Confidence            98744    7999999999999975432          22333    34444332 233466679999999999999999


Q ss_pred             hCCc-cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          273 RNEK-INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       273 ~~~~-~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +++. ..+++||+++++.+|+.|+++.+.+.+|.+.++...+...              .             ....+..
T Consensus       231 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~-------------~~~~~~~  283 (319)
T 4b8w_A          231 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKS--------------D-------------GQFKKTA  283 (319)
T ss_dssp             HHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSC--------------C-------------CCSCCCB
T ss_pred             hccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCC--------------c-------------CcccccC
Confidence            8843 4567999999999999999999999999988776654320              0             1112336


Q ss_pred             cccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          352 PMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      |+++++++|||.|.  ++++|+|+++++|++++.+
T Consensus       284 d~~k~~~~lg~~p~--~~~~~~l~~~~~~~~~~~~  316 (319)
T 4b8w_A          284 SNSKLRTYLPDFRF--TPFKQAVKETCAWFTDNYE  316 (319)
T ss_dssp             CCHHHHHHCTTCCC--CCHHHHHHHHHHHHHHSCS
T ss_pred             CHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHHHh
Confidence            78999999999998  7999999999999987654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.9e-37  Score=286.76  Aligned_cols=282  Identities=17%  Similarity=0.191  Sum_probs=216.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      |+||||||||+||+++++.|++. |++|++++|+..+. ..+...+++++++|++|++++.++++++|+|||+++.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            47999999999999999999998 99999999985543 3345568999999999999999999999999999985432 


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhhc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPIL  242 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~  242 (399)
                        ...|+.++.+++++|++.+++|||++||.+........+...+..+|+.+++.|++++++||++++++... ++..+.
T Consensus        79 --~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~-~~~~~~  155 (289)
T 3e48_A           79 --SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKP-YLPELM  155 (289)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHH-HHHHHH
T ss_pred             --chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEEeccccccccHH-HHHHHH
Confidence              23588999999999999999999999998765555555566667889999999999999999999987653 333333


Q ss_pred             cccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHH
Q 015872          243 EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ  322 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~  322 (399)
                      .........++.+++|++++|+|++++.++.++...|++||++ ++.+|+.|+++.+.+.+|+++++..++.......  
T Consensus       156 ~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~--  232 (289)
T 3e48_A          156 NMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEM--  232 (289)
T ss_dssp             HHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHH--
T ss_pred             HCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHH--
Confidence            3333333335777899999999999999999987668999999 8999999999999999999998888887754322  


Q ss_pred             HhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHH
Q 015872          323 LTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTN  380 (399)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~  380 (399)
                      +....+..    ..+.........+.+......+++.||++|+   +|+||++++..+
T Consensus       233 ~~~p~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~---~~~~~~~~~~~~  283 (289)
T 3e48_A          233 YDEPKGFG----ALLASMYHAGARGLLDQESNDFKQLVNDQPQ---TLQSFLQENILE  283 (289)
T ss_dssp             TCCSTTHH----HHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC---CHHHHHHC----
T ss_pred             hcCCccHH----HHHHHHHHHHHCCCccccCchHHHHhCCCCC---CHHHHHHHHHHh
Confidence            11101111    1111111112233444456778899999998   999999876544

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=8e-37  Score=289.99  Aligned_cols=275  Identities=20%  Similarity=0.227  Sum_probs=214.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC---C---CcEEEEecCCCC-Cccccc----cCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDE---G---YDVRCLVRPRPA-PADFLR----DWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~---g---~~V~~~~r~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |+|||||||||||++++++|+++   |   ++|++++|.... ....+.    ..+++++.+|++|++++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            57999999999999999999997   8   999999996422 111121    246899999999999999999999999


Q ss_pred             EECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHH
Q 015872          153 IDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~  212 (399)
                      ||+|+..       ++..++++|+.++.+++++|.+.++++|||+||.+++.             .+..+|+.+|..+|+
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            9999843       34456789999999999999999999999999976532             345789999999999


Q ss_pred             HHH----hCCCCEEEEecCccccccc------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          213 FLQ----DSGLPHVIIRLCGFMQGLI------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       213 ~l~----~~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +++    +.|++++++||+++|+...      ..++..+..+..+. ..+++..++|+|++|+|++++.+++++. .|++
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  239 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AGEI  239 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-CCCE
Confidence            874    3699999999999997543      22333344444322 1234556699999999999999998754 5789


Q ss_pred             EEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          282 LTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      ||+++++.+|+.|+++.+.+.+|.+.+ +...+..              +             ..+..+..|+++++++|
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~-------------~~~~~~~~d~~k~~~~l  292 (337)
T 1r6d_A          240 YHIGGGLELTNRELTGILLDSLGADWSSVRKVADR--------------K-------------GHDLRYSLDGGKIEREL  292 (337)
T ss_dssp             EEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCC--------------T-------------TCCCBCCBCCHHHHHHH
T ss_pred             EEeCCCCCccHHHHHHHHHHHhCCCcccceecCCC--------------C-------------CCcceeecCHHHHHHHc
Confidence            999999999999999999999998643 2111100              0             01223446789999999


Q ss_pred             CCCCCccccHHHHHHHHHHHHHHhhHHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNILKKLKDL  388 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~~~~~~~  388 (399)
                      ||+|.  ++++|+|+++++|++++.+..
T Consensus       293 G~~p~--~~~~e~l~~~~~~~~~~~~~~  318 (337)
T 1r6d_A          293 GYRPQ--VSFADGLARTVRWYRENRGWW  318 (337)
T ss_dssp             CCCCC--SCHHHHHHHHHHHHHHCHHHH
T ss_pred             CCCCC--CCHHHHHHHHHHHHHhchhcc
Confidence            99998  799999999999998765443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=9.3e-38  Score=297.12  Aligned_cols=287  Identities=15%  Similarity=0.197  Sum_probs=212.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCC-CcHHHHhcCCCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-~~l~~~~~~~d~Vi~~a~~~~-  160 (399)
                      |+|||||||||||++++++|+++ |++|++++|+..+........+++++++|++|. +.+.++++++|+|||+|+... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            57999999999999999999998 899999999855433333345789999999985 468888999999999998432 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------------CCCcHHHHHHHHHHHH
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------------PEVPLMEIKYCTEQFL  214 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------------~~~~y~~~K~~~E~~l  214 (399)
                            ....+++|+.++.+++++|++.+ ++|||+||.+++..                    +.++|+.+|..+|+++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence                  23456789999999999999999 89999999765321                    1227999999999988


Q ss_pred             H----hCCCCEEEEecCcccccccc--------------cchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          215 Q----DSGLPHVIIRLCGFMQGLIG--------------QYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       215 ~----~~g~~~~ilRp~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +    +.|++++++||+++||....              .++..+..+..+ ...+++..++|+|++|+|++++.+++++
T Consensus       160 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  239 (345)
T 2bll_A          160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA  239 (345)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             HHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc
Confidence            4    46999999999999975431              223334444433 2223455669999999999999999876


Q ss_pred             c--cCCcEEEEcCCC-CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          276 K--INGRTLTFSGPR-AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       276 ~--~~g~~~~l~~~~-~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                      .  ..|++||+++++ .+|+.|+++.+.+.+|.+.....+|.............++            ...........|
T Consensus       240 ~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~d  307 (345)
T 2bll_A          240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG------------KGYQDVEHRKPS  307 (345)
T ss_dssp             GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------------------CCCCCBC
T ss_pred             cccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhcc------------ccccchhhhccc
Confidence            4  467899999986 7999999999999999875544444321000000000000            000011223457


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      .++++++|||+|+  ++++|+|+++++|+.++.
T Consensus       308 ~~k~~~~lG~~p~--~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          308 IRNAHRCLDWEPK--IDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             CHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhcCCCcc--ccHHHHHHHHHHHHHHcC
Confidence            7899999999998  799999999999997654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.8e-37  Score=290.82  Aligned_cols=269  Identities=15%  Similarity=0.212  Sum_probs=213.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc--CCCEEEECC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a  156 (399)
                      .+..|+||||||+||||++++++|+++|++|++++|+.......+.. .+++++.+|++|.+++.++++  ++|+|||+|
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            45568999999999999999999999999999999975443311111 378899999999999999998  999999999


Q ss_pred             CCCCC---Ccc-hhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------CCCcHHHHHHHHHHHHHhCCC
Q 015872          157 TGRPE---EPI-KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFLQDSGL  219 (399)
Q Consensus       157 ~~~~~---~~~-~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~~g~  219 (399)
                      |....   ..+ .++|+.++.+++++|.+.++++||++||.+++..             +..+|+.+|..+|++++..++
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~  176 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDV  176 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSS
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCC
Confidence            94332   111 5789999999999999999999999999876432             567899999999999999999


Q ss_pred             CEEEEecCccccccc-----ccchhhhccccccccCCCCcceeceeHHHHHH-HHHHHHhCCccCCcEEEEcCCCCCCHH
Q 015872          220 PHVIIRLCGFMQGLI-----GQYAVPILEEKSVWGTDALTRIAYMDTQDIAR-LTFVALRNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       220 ~~~ilRp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~-~i~~~l~~~~~~g~~~~l~~~~~~s~~  293 (399)
                      +++++||+++|+...     ..++..+..+..+++.+ . ..+++|++|+|+ +++.+++++.  +++||+++++.+|+.
T Consensus       177 ~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s~~  252 (330)
T 2pzm_A          177 PVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSD-T-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHSIK  252 (330)
T ss_dssp             CEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEES-C-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEEHH
T ss_pred             CEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCC-C-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCCHH
Confidence            999999999997542     11222233333334433 3 569999999999 9999998764  889999999999999


Q ss_pred             HHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccc-----ccccCCCCCccc
Q 015872          294 EVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET-----FDLLGVDAKDII  368 (399)
Q Consensus       294 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~LG~~p~~~~  368 (399)
                      |+++.+.+.+|.+ ++..+|.+              +              ....+..|++++     ++ |||+|.  +
T Consensus       253 e~~~~i~~~~g~~-~~~~~~~~--------------~--------------~~~~~~~d~~k~~~~~l~~-lG~~p~--~  300 (330)
T 2pzm_A          253 EVFDVVLDYVGAT-LAEPVPVV--------------A--------------PGADDVPSVVLDPSKTETE-FGWKAK--V  300 (330)
T ss_dssp             HHHHHHHHHHTCC-CSSCCCEE--------------C--------------CCTTSCSEECBCCHHHHHH-HCCCCC--C
T ss_pred             HHHHHHHHHhCCC-CceeCCCC--------------c--------------chhhccCCHHHHhhchHHH-cCCccc--C
Confidence            9999999999987 55444322              0              011223566788     67 999998  7


Q ss_pred             cHHHHHHHHHHHHHHh
Q 015872          369 TLEKYLQDYFTNILKK  384 (399)
Q Consensus       369 ~lee~l~~~~~~~~~~  384 (399)
                      +++|+|+++++|+++.
T Consensus       301 ~~~~~l~~~~~~~~~~  316 (330)
T 2pzm_A          301 DFKDTITGQLAWYDKY  316 (330)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhh
Confidence            9999999999999754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=5.1e-37  Score=292.56  Aligned_cols=272  Identities=17%  Similarity=0.223  Sum_probs=213.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCC-Ccc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPA-PAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~-~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ||+||||||+||||++++++|+++  |++|++++|+... ...   .+...+++++.+|++|++++.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            478999999999999999999999  8999999997432 111   1223478999999999999999999999999999


Q ss_pred             CCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------------------CCCCcHH
Q 015872          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------------------HPEVPLM  204 (399)
Q Consensus       157 ~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------------------~~~~~y~  204 (399)
                      +..       ....+.++|+.++.+++++|.+.++ +|||+||.+++.                         .+..+|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            943       3445678999999999999999998 999999976432                         2456899


Q ss_pred             HHHHHHHHHHHh----CCCCEEEEecCcccccccc------cchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHH
Q 015872          205 EIKYCTEQFLQD----SGLPHVIIRLCGFMQGLIG------QYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       205 ~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .+|..+|++++.    .|++++++||+++|+....      .++..+..+..+  ++ .++...+++|++|+|++++.++
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~  241 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG-EGKNVRDWIHTNDHSTGVWAIL  241 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET-TSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEec-CCCceEeeEEHHHHHHHHHHHh
Confidence            999999998754    5999999999999975432      223333444432  33 3455669999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +++. .|++||+++++.+|+.|+++.+.+.+|.+.+ +...+..              +             ..+..+..
T Consensus       242 ~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~-------------~~~~~~~~  293 (348)
T 1oc2_A          242 TKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR--------------A-------------GHDLRYAI  293 (348)
T ss_dssp             HHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC--------------T-------------TCCCBCCB
T ss_pred             hCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCC--------------C-------------Cccccccc
Confidence            8754 5789999999999999999999999998753 2221110              0             01223446


Q ss_pred             cccccccccCCCCCcccc-HHHHHHHHHHHHHHhhH
Q 015872          352 PMSETFDLLGVDAKDIIT-LEKYLQDYFTNILKKLK  386 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~-lee~l~~~~~~~~~~~~  386 (399)
                      |+++++++|||+|+  ++ ++|+|+++++|+.++..
T Consensus       294 d~~k~~~~lG~~p~--~~~~~~~l~~~~~~~~~~~~  327 (348)
T 1oc2_A          294 DASKLRDELGWTPQ--FTDFSEGLEETIQWYTDNQD  327 (348)
T ss_dssp             CCHHHHHHHCCCCS--CCCHHHHHHHHHHHHHHTHH
T ss_pred             CHHHHHHHcCCCCC--CCcHHHHHHHHHHHHHHhhh
Confidence            78999999999998  67 99999999999987644

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=4.3e-37  Score=298.39  Aligned_cols=276  Identities=18%  Similarity=0.257  Sum_probs=215.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCcEEEEecCCCCC--------ccccc-----------cCC---cEEEEccCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRPAP--------ADFLR-----------DWG---ATVVNADLSKPE  140 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~-~~g~~V~~~~r~~~~~--------~~~l~-----------~~~---v~~~~~Dl~d~~  140 (399)
                      |+||||||+||||++++++|+ ++|++|++++|+....        ...+.           ..+   ++++.+|++|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            689999999999999999999 9999999999975442        11121           124   899999999999


Q ss_pred             cHHHHhc--C-CCEEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------------
Q 015872          141 TIPATLV--G-VHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------  198 (399)
Q Consensus       141 ~l~~~~~--~-~d~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------------  198 (399)
                      ++.++++  + +|+|||+|+...       ...++++|+.++.+++++|++.++++||++||.+++..            
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  162 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEP  162 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccC
Confidence            9999987  6 999999999432       33456799999999999999999999999999876432            


Q ss_pred             --------CCCcHHHHHHHHHHHHHh----CCCCEEEEecCccccccc-----------ccchh--------hhcccc--
Q 015872          199 --------PEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLI-----------GQYAV--------PILEEK--  245 (399)
Q Consensus       199 --------~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~-----------~~~~~--------~~~~~~--  245 (399)
                              |..+|+.+|..+|++++.    .|++++++||+++|+...           ..++.        .+..+.  
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (397)
T 1gy8_A          163 IDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL  242 (397)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC---
T ss_pred             cCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCcc
Confidence                    247899999999998854    599999999999996531           11111        222222  


Q ss_pred             ------------cccc-----CCCCcceeceeHHHHHHHHHHHHhCCccC-----C---cEEEEcCCCCCCHHHHHHHHH
Q 015872          246 ------------SVWG-----TDALTRIAYMDTQDIARLTFVALRNEKIN-----G---RTLTFSGPRAWTTQEVITLCE  300 (399)
Q Consensus       246 ------------~~~~-----~~~~~~~~~v~v~Dva~~i~~~l~~~~~~-----g---~~~~l~~~~~~s~~e~~~~~~  300 (399)
                                  .+++     .+++..++|+|++|+|++++.+++++...     +   ++||+++++.+|+.|+++.+.
T Consensus       243 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~  322 (397)
T 1gy8_A          243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVAR  322 (397)
T ss_dssp             --------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHH
T ss_pred             ccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHH
Confidence                        1333     13466779999999999999999864322     3   799999999999999999999


Q ss_pred             HHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc-cHHHHHHHHHH
Q 015872          301 RLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII-TLEKYLQDYFT  379 (399)
Q Consensus       301 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~-~lee~l~~~~~  379 (399)
                      +.+|.+.++...+..              ..             ....+..|+++++++|||+|+  + +++|+|+++++
T Consensus       323 ~~~g~~~~~~~~~~~--------------~~-------------~~~~~~~d~~k~~~~lG~~p~--~~~l~e~l~~~~~  373 (397)
T 1gy8_A          323 KTTGHPIPVRECGRR--------------EG-------------DPAYLVAASDKAREVLGWKPK--YDTLEAIMETSWK  373 (397)
T ss_dssp             HHHCCCCCEEEECCC--------------TT-------------CCSEECBCCHHHHHHTCCCCS--CCSHHHHHHHHHH
T ss_pred             HHhCCCCCeeeCCCC--------------CC-------------cccccccCHHHHHHHhCCCCC--cCCHHHHHHHHHH
Confidence            999988776655421              00             111234678999999999998  7 99999999999


Q ss_pred             HHHHhhHHH
Q 015872          380 NILKKLKDL  388 (399)
Q Consensus       380 ~~~~~~~~~  388 (399)
                      |++++.+.+
T Consensus       374 ~~~~~~~~~  382 (397)
T 1gy8_A          374 FQRTHPNGY  382 (397)
T ss_dssp             HHHTCTTTT
T ss_pred             HHHhccccc
Confidence            998775543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-37  Score=288.80  Aligned_cols=255  Identities=16%  Similarity=0.121  Sum_probs=208.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCC--
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR--  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~--  159 (399)
                      |+|||||||||||+++++.|+++|++|++++|.                ++|++|.+.+.++++  ++|+|||+|+..  
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            489999999999999999999999999999993                389999999999998  799999999843  


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                           .+....++|+.++.+++++|++.++ ||||+||..++.             .|.++|+.+|..+|+++++.+.++
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  148 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKY  148 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Confidence                 3455668999999999999999998 799999986642             245789999999999999988899


Q ss_pred             EEEecCccccccccc----chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHH
Q 015872          222 VIIRLCGFMQGLIGQ----YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                      +++||+++||.....    +...+..+..+...+ +..++++|++|+|++++.+++++.  +++||+++++.+|+.|+++
T Consensus       149 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~  225 (287)
T 3sc6_A          149 FIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA-DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSCSWFEFAK  225 (287)
T ss_dssp             EEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC-SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCEEHHHHHH
T ss_pred             EEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec-CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcccHHHHHH
Confidence            999999999754333    233333344333333 466799999999999999999876  6799999999999999999


Q ss_pred             HHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH
Q 015872          298 LCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY  377 (399)
Q Consensus       298 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~  377 (399)
                      .+.+.+|.+.++.+++.....                      ...........|.++++ .|||.|.  .+++|+|+++
T Consensus       226 ~i~~~~g~~~~~~~~~~~~~~----------------------~~~~~~~~~~~d~~k~~-~lg~~p~--~~~~~~l~~~  280 (287)
T 3sc6_A          226 KIFSYANMKVNVLPVSTEEFG----------------------AAAARPKYSIFQHNMLR-LNGFLQM--PSWEEGLERF  280 (287)
T ss_dssp             HHHHHHTCCCEEEEECHHHHC----------------------CSSCCCSBCCBCCHHHH-HTTCCCC--CBHHHHHHHH
T ss_pred             HHHHHcCCCcceeeeehhhcC----------------------cccCCCCcccccHHHHH-hhCCCCC--ccHHHHHHHH
Confidence            999999999888887765321                      00011223346788998 8999998  7999999999


Q ss_pred             HHHHHH
Q 015872          378 FTNILK  383 (399)
Q Consensus       378 ~~~~~~  383 (399)
                      ++|+++
T Consensus       281 ~~~~~~  286 (287)
T 3sc6_A          281 FIETKS  286 (287)
T ss_dssp             HHHTC-
T ss_pred             HHHHhc
Confidence            998753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.9e-37  Score=292.20  Aligned_cols=262  Identities=13%  Similarity=0.111  Sum_probs=207.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~  158 (399)
                      |++|+|||||||||||++|+++|+++|++|++++|+.               .+|++|.+++.++++  ++|+|||+|+.
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~   65 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAK   65 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCee
Confidence            3457899999999999999999999999999988752               379999999999998  99999999985


Q ss_pred             CC--------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-----------------C-CCcHHHHHHHHHH
Q 015872          159 RP--------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----------------P-EVPLMEIKYCTEQ  212 (399)
Q Consensus       159 ~~--------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-----------------~-~~~y~~~K~~~E~  212 (399)
                      ..        +..+.++|+.++.+++++|++.++++|||+||.+++..                 | ..+|+.+|..+|+
T Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~  145 (321)
T 1e6u_A           66 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIK  145 (321)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHH
T ss_pred             cCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHH
Confidence            42        23456789999999999999999999999999876521                 1 1479999999999


Q ss_pred             HHHh----CCCCEEEEecCcccccccc----------cchhhhcc----c-cccc-cCCCCcceeceeHHHHHHHHHHHH
Q 015872          213 FLQD----SGLPHVIIRLCGFMQGLIG----------QYAVPILE----E-KSVW-GTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       213 ~l~~----~g~~~~ilRp~~~~~~~~~----------~~~~~~~~----~-~~~~-~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ++++    .+++++++||+++||....          .++..+..    + ..+. ...++..++|+|++|+|++++.++
T Consensus       146 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~  225 (321)
T 1e6u_A          146 LCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM  225 (321)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHH
Confidence            8865    5999999999999975432          22233322    2 2221 233466679999999999999999


Q ss_pred             hCCccC--------CcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhc
Q 015872          273 RNEKIN--------GRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLT  344 (399)
Q Consensus       273 ~~~~~~--------g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (399)
                      +++...        +++||+++++.+|+.|+++.+.+.+|.+.++...+..              +.             
T Consensus       226 ~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~-------------  278 (321)
T 1e6u_A          226 ELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK--------------PD-------------  278 (321)
T ss_dssp             HSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS--------------CC-------------
T ss_pred             hCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC--------------CC-------------
Confidence            986542        6899999999999999999999999988776655421              00             


Q ss_pred             cCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          345 SDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       345 ~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ....+..|++++++ |||+|+  ++++|+|+++++|++++.+.
T Consensus       279 ~~~~~~~d~~k~~~-lG~~p~--~~~~~~l~~~~~~~~~~~~~  318 (321)
T 1e6u_A          279 GTPRKLLDVTRLHQ-LGWYHE--ISLEAGLASTYQWFLENQDR  318 (321)
T ss_dssp             CCSBCCBCCHHHHH-TTCCCC--CCHHHHHHHHHHHHHHTC--
T ss_pred             CcccccCCHHHHHh-cCCccC--CcHHHHHHHHHHHHHHHHHh
Confidence            01123467889999 999998  79999999999999876543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=3.6e-37  Score=290.00  Aligned_cols=262  Identities=17%  Similarity=0.151  Sum_probs=205.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC---Ccccc----ccCCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFL----RDWGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~---~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +++|+|||||||||||++|+++|+++|++|++++|+...   ....+    ...+++++.+|+.          ++|+||
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi   74 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY   74 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence            446899999999999999999999999999999997551   21111    1234556666654          899999


Q ss_pred             ECCCC-------CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHH
Q 015872          154 DCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       154 ~~a~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~  213 (399)
                      |+|+.       ..+....+ |+.++.+++++|++.++++|||+||.+++.             .|.++|+.+|..+|++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            99983       33445556 999999999999999999999999986643             2457899999999998


Q ss_pred             HHh----CCC-CEEEEecCccccccc------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          214 LQD----SGL-PHVIIRLCGFMQGLI------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       214 l~~----~g~-~~~ilRp~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +++    .++ +++++||+++|+...      ..++..+..+..+. ..+++..++|+|++|+|++++.+++++.. | +
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~  231 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-V  231 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-E
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-e
Confidence            865    689 999999999997542      23344444554332 23346677999999999999999998765 6 9


Q ss_pred             EEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccC
Q 015872          282 LTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLG  361 (399)
Q Consensus       282 ~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG  361 (399)
                      ||+++++.+|+.|+++.+. .+|.+.++...|...              .             ....+..|.++++++||
T Consensus       232 ~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~--------------~-------------~~~~~~~d~~k~~~~lG  283 (321)
T 3vps_A          232 VNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRP--------------N-------------EITEFRADTALQTRQIG  283 (321)
T ss_dssp             EEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCT--------------T-------------CCSBCCBCCHHHHHHHC
T ss_pred             EEecCCCcccHHHHHHHHH-HhCCCCccccCCCCC--------------C-------------CcceeeccHHHHHHHhC
Confidence            9999999999999999999 999998887665421              0             11234467899999999


Q ss_pred             CCC-CccccHHHHHHHHHHHHHHhh
Q 015872          362 VDA-KDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       362 ~~p-~~~~~lee~l~~~~~~~~~~~  385 (399)
                      |+| +  ++++|+|+++++|+++..
T Consensus       284 ~~p~~--~~~~~~l~~~~~~~~~~~  306 (321)
T 3vps_A          284 ERSGG--IGIEEGIRLTLEWWQSRD  306 (321)
T ss_dssp             CCSCC--CCHHHHHHHHHHHHHTSC
T ss_pred             CCCCc--CCHHHHHHHHHHHHHhCC
Confidence            999 6  699999999999997663

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=4.2e-36  Score=278.42  Aligned_cols=263  Identities=17%  Similarity=0.130  Sum_probs=202.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      |+|+|||||| ||||++|+++|+++||+|++++|+..+ ...+...+++++.+|++|.+     ++++|+|||+|+....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSG   76 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhh-hhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccc
Confidence            3579999998 999999999999999999999998543 33344568999999999955     7899999999985433


Q ss_pred             CcchhccHHHHHHHHHHHHH--cCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHhC-CCCEEEEe
Q 015872          162 EPIKKVDWEGKVALIQCAKA--MGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQDS-GLPHVIIR  225 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~--~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~~-g~~~~ilR  225 (399)
                      ..      ..+.++++++++  .++++|||+||.+++.             .|.++|+.+|..+|+++++. +++++++|
T Consensus        77 ~~------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilR  150 (286)
T 3ius_A           77 GD------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFR  150 (286)
T ss_dssp             BC------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred             cc------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEe
Confidence            21      346889999999  7899999999987643             23457999999999999998 99999999


Q ss_pred             cCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCC
Q 015872          226 LCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ  305 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~  305 (399)
                      |+++|+..... +..+..+......+++..++|+|++|+|++++.+++++. .|++||+++++.+|+.|+++.+.+.+|.
T Consensus       151 p~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~  228 (286)
T 3ius_A          151 LAGIYGPGRGP-FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGL  228 (286)
T ss_dssp             ECEEEBTTBSS-STTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred             ccceECCCchH-HHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCC
Confidence            99999875433 344445543333333566799999999999999999877 5789999999999999999999999998


Q ss_pred             CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc-cHHHHHHHHHHH
Q 015872          306 DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII-TLEKYLQDYFTN  380 (399)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~-~lee~l~~~~~~  380 (399)
                      +.+... +.....           ..+...     ..+  ......|+++++++|||+|+  . +++|+|+++++.
T Consensus       229 ~~~~~~-~~~~~~-----------~~~~~~-----~~~--~~~~~~d~~k~~~~lG~~p~--~p~~~e~l~~~~~~  283 (286)
T 3ius_A          229 PLPPAV-DFDKAD-----------LTPMAR-----SFY--SENKRVRNDRIKEELGVRLK--YPNYRVGLEALQAD  283 (286)
T ss_dssp             CCCCEE-EGGGSC-----------CCHHHH-----HTT--SCCCEECCHHHHHTTCCCCS--CSSHHHHHHHHHHT
T ss_pred             CCCccc-chhhhc-----------cChhHH-----Hhh--cCCceeehHHHHHHhCCCCC--cCCHHHHHHHHHHh
Confidence            765422 211000           000000     111  12233678999999999998  7 799999998764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.6e-36  Score=287.25  Aligned_cols=271  Identities=15%  Similarity=0.199  Sum_probs=209.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----ccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .+++|+|||||||||||++|+++|+++|++|++++|+.......+    ...+++++.+|+.|..     +.++|+|||+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEEC
Confidence            355689999999999999999999999999999999744322212    2246899999998753     5789999999


Q ss_pred             CCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC------------------CCCCcHHHHHHHH
Q 015872          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------------HPEVPLMEIKYCT  210 (399)
Q Consensus       156 a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~------------------~~~~~y~~~K~~~  210 (399)
                      |+...       +....++|+.++.+++++|++.++ +||++||.+++.                  .+..+|+.+|..+
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            98432       234567999999999999999997 999999986542                  1234699999999


Q ss_pred             HHHHH----hCCCCEEEEecCccccccc--------ccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          211 EQFLQ----DSGLPHVIIRLCGFMQGLI--------GQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       211 E~~l~----~~g~~~~ilRp~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      |++++    +.+++++++||+++|+...        ..++..+..+..+. ..+++..++|+|++|+|++++.+++.+. 
T Consensus       178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  256 (343)
T 2b69_A          178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-  256 (343)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-
T ss_pred             HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-
Confidence            99874    4699999999999997542        22334444554332 2234566799999999999999998753 


Q ss_pred             CCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          278 NGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       278 ~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                       +++||+++++.+|+.|+++.+.+.+|.+.++..+|...              .             ....+..|.++++
T Consensus       257 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~--------------~-------------~~~~~~~d~~k~~  308 (343)
T 2b69_A          257 -SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--------------D-------------DPQKRKPDIKKAK  308 (343)
T ss_dssp             -CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT--------------T-------------CCCCCCBCCHHHH
T ss_pred             -CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC--------------C-------------CCceecCCHHHHH
Confidence             67999999999999999999999999988777665321              0             0112335778999


Q ss_pred             cccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          358 DLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       358 ~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      ++|||+|.  ++++|+|+++++|++++.+.
T Consensus       309 ~~lG~~p~--~~l~e~l~~~~~~~~~~~~~  336 (343)
T 2b69_A          309 LMLGWEPV--VPLEEGLNKAIHYFRKELEY  336 (343)
T ss_dssp             HHHCCCCC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCC--CCHHHHHHHHHHHHHHHHHH
Confidence            99999998  79999999999999877644

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.3e-37  Score=292.13  Aligned_cols=269  Identities=13%  Similarity=0.081  Sum_probs=207.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~  158 (399)
                      +|+|||||||||||++++++|+++  |++|++++|+..+..  + ..+++++.+|++|.+++.++++  ++|+|||+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--V-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--H-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--c-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            478999999999999999999999  899999999755421  1 1267899999999999999998  89999999984


Q ss_pred             C------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CCCCcHHHHHHHHHHHHHh--
Q 015872          159 R------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFLQD--  216 (399)
Q Consensus       159 ~------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~l~~--  216 (399)
                      .      ......++|+.++.+++++|++.++++|||+||.+++.              .|..+|+.+|..+|++++.  
T Consensus        79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  158 (312)
T 2yy7_A           79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYH  158 (312)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHH
Confidence            3      23445679999999999999999999999999986642              2356899999999998743  


Q ss_pred             --CCCCEEEEecCccccccc----------ccchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCcc---CCc
Q 015872          217 --SGLPHVIIRLCGFMQGLI----------GQYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKI---NGR  280 (399)
Q Consensus       217 --~g~~~~ilRp~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~---~g~  280 (399)
                        .|++++++||+++|+...          ...+...+.++.+ ...+++..++|+|++|+|++++.+++++..   .++
T Consensus       159 ~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  238 (312)
T 2yy7_A          159 NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHS  238 (312)
T ss_dssp             HHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSS
T ss_pred             HhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCc
Confidence              589999999999997421          1111222333322 223345667999999999999999998653   248


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLL  360 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  360 (399)
                      +||+++ +.+|+.|+++.+.+.+|. .++...|...              ..          .........|+++++++|
T Consensus       239 ~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~--------------~~----------~~~~~~~~~d~~k~~~~l  292 (312)
T 2yy7_A          239 SYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFR--------------QK----------IADSWPASIDDSQAREDW  292 (312)
T ss_dssp             CEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTH--------------HH----------HHTTSCSSBCCHHHHHHH
T ss_pred             eEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCcc--------------cc----------ccccccccCCHHHHHHHc
Confidence            999997 789999999999999983 3333333200              00          001111236789999999


Q ss_pred             CCCCCccccHHHHHHHHHHHHH
Q 015872          361 GVDAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       361 G~~p~~~~~lee~l~~~~~~~~  382 (399)
                      ||+|+  ++++|+|+++++|++
T Consensus       293 G~~p~--~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          293 DWKHT--FDLESMTKDMIEHLS  312 (312)
T ss_dssp             CCCCC--CCHHHHHHHHHHHHC
T ss_pred             CCCCC--CCHHHHHHHHHHHhC
Confidence            99998  799999999999873

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-37  Score=290.79  Aligned_cols=277  Identities=16%  Similarity=0.151  Sum_probs=211.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-ccc----ccCCcEEEEccCCCCCcHHHHhcC--CCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFL----RDWGATVVNADLSKPETIPATLVG--VHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~~l----~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~  154 (399)
                      ++|+||||||+||||+++++.|+++|++|++++|+..+.. ..+    ...+++++.+|++|.+++.+++++  +|+|||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            4688999999999999999999999999999999755421 111    123688999999999999999985  799999


Q ss_pred             CCCCC-------CCCcchhccHHHHHHHHHHHHHcCC-cEEEEecccCCCC-------------CCCCcHHHHHHHHHHH
Q 015872          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       155 ~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v-~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~  213 (399)
                      +|+..       .+....++|+.++.+++++|++.++ ++||++||.+++.             .|.++|+.+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            99843       2334567899999999999999996 8999999976542             2346899999999998


Q ss_pred             HHh----CCCCEEEEecCcccccccc---------cchhhhcccc-c-cccCCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          214 LQD----SGLPHVIIRLCGFMQGLIG---------QYAVPILEEK-S-VWGTDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       214 l~~----~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~-~-~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      +++    .+++++++||+++|+....         .++..+..+. . +..++++..++|+|++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            854    5899999999999975321         1222333443 2 223344667799999999999999999865  


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      +++||+++++.+|+.|+++.+.+.+|.+.+ ...++...                 ...       .....+..|+++++
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------~~~-------~~~~~~~~d~~k~~  306 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-----------------FRP-------AEVDVLLGNPAKAQ  306 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-----------------CCS-------SCCCBCCBCTHHHH
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc-----------------cCC-------CcchhhcCCHHHHH
Confidence            479999999999999999999999998643 11111100                 000       01112346789999


Q ss_pred             cccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          358 DLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       358 ~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      ++|||+|.  ++++|+|+++++|+++..+
T Consensus       307 ~~lG~~p~--~~l~e~l~~~~~~~~~~~~  333 (335)
T 1rpn_A          307 RVLGWKPR--TSLDELIRMMVEADLRRVS  333 (335)
T ss_dssp             HHHCCCCC--SCHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCcC--CCHHHHHHHHHHHHHHhhc
Confidence            99999998  7999999999999987654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=3.9e-37  Score=289.35  Aligned_cols=267  Identities=15%  Similarity=0.125  Sum_probs=188.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCCCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR-  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~~~-  159 (399)
                      +|+|||||||||||++++++|+++|++|++++|+...       .+  ++.+|++|++++.+++++  +|+|||+|+.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            4789999999999999999999999999999987443       12  788999999999999985  99999999832 


Q ss_pred             ------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC------------CCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          160 ------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------HPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       160 ------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~------------~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                            ++....++|+.++.+++++|.+.++ +|||+||..++.            .+..+|+.+|..+|++++..++++
T Consensus        73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  151 (315)
T 2ydy_A           73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA  151 (315)
T ss_dssp             ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe
Confidence                  3445678999999999999999997 999999987643            356789999999999999999999


Q ss_pred             EEEecCcccccccc-------cchhhhc-cccccccCCCCcceeceeHHHHHHHHHHHHhCC---ccCCcEEEEcCCCCC
Q 015872          222 VIIRLCGFMQGLIG-------QYAVPIL-EEKSVWGTDALTRIAYMDTQDIARLTFVALRNE---KINGRTLTFSGPRAW  290 (399)
Q Consensus       222 ~ilRp~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~---~~~g~~~~l~~~~~~  290 (399)
                      +++||+.+||....       .+...+. .+..+...+ +...+++|++|+|++++.+++++   ...+++||+++++.+
T Consensus       152 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          152 AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDH-WQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEEC-SSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeecc-CceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence            99999999964332       2222232 333332222 45569999999999999999764   345789999999999


Q ss_pred             CHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCcccc
Q 015872          291 TTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIIT  369 (399)
Q Consensus       291 s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~  369 (399)
                      |+.|+++.+.+.+|.+.+ +.+++..              +..         ..........|+++++++ ||+|.  ++
T Consensus       231 s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~~~---------~~~~~~~~~~d~~k~~~~-G~~p~--~~  284 (315)
T 2ydy_A          231 TKYEMACAIADAFNLPSSHLRPITDS--------------PVL---------GAQRPRNAQLDCSKLETL-GIGQR--TP  284 (315)
T ss_dssp             CHHHHHHHHHHHTTCCCTTEEEECSC--------------CCS---------SSCCCSBCCBCCHHHHHT-TCCCC--CC
T ss_pred             cHHHHHHHHHHHhCCChhheeccccc--------------ccc---------ccCCCcccccchHHHHhc-CCCCC--CC
Confidence            999999999999998765 4444420              000         000112344678899888 99998  79


Q ss_pred             HHHHHHHHHHHHHHhhH
Q 015872          370 LEKYLQDYFTNILKKLK  386 (399)
Q Consensus       370 lee~l~~~~~~~~~~~~  386 (399)
                      ++|+|+++++|+.++..
T Consensus       285 ~~~~l~~~~~~~~~~~~  301 (315)
T 2ydy_A          285 FRIGIKESLWPFLIDKR  301 (315)
T ss_dssp             HHHHHHHHHGGGCC---
T ss_pred             HHHHHHHHHHHHccchh
Confidence            99999999999987644

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=7.1e-37  Score=297.47  Aligned_cols=278  Identities=13%  Similarity=0.135  Sum_probs=213.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----------------cc------cccCCcEEEEccCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----------------DF------LRDWGATVVNADLSKPE  140 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----------------~~------l~~~~v~~~~~Dl~d~~  140 (399)
                      +++|||||||||||++++++|+++|++|++++|......                +.      +...+++++.+|++|++
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            578999999999999999999999999999998532110                00      11247899999999999


Q ss_pred             cHHHHhcC--CCEEEECCCCCC-------CC---cchhccHHHHHHHHHHHHHcCC-cEEEEecccCCCC----------
Q 015872          141 TIPATLVG--VHTVIDCATGRP-------EE---PIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCDK----------  197 (399)
Q Consensus       141 ~l~~~~~~--~d~Vi~~a~~~~-------~~---~~~~~n~~~~~~l~~aa~~~~v-~~~V~~Ss~~~~~----------  197 (399)
                      ++.+++++  +|+|||+||...       +.   ...++|+.|+.+++++|++.++ ++||++||.+++.          
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~~  170 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  170 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCccc
Confidence            99999987  999999998432       11   2457899999999999999998 5999999986542          


Q ss_pred             ----------------CCCCcHHHHHHHHHHHHHh----CCCCEEEEecCccccccc-----------------------
Q 015872          198 ----------------HPEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLI-----------------------  234 (399)
Q Consensus       198 ----------------~~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~-----------------------  234 (399)
                                      .+.++|+.+|..+|++++.    .|++++++||+++||...                       
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  250 (404)
T 1i24_A          171 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  250 (404)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             cccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHH
Confidence                            2356799999999998754    499999999999997532                       


Q ss_pred             ccchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCC--cEEEEcCCCCCCHHHHHHHHHHH---hCCCCC
Q 015872          235 GQYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKING--RTLTFSGPRAWTTQEVITLCERL---AGQDAN  308 (399)
Q Consensus       235 ~~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g--~~~~l~~~~~~s~~e~~~~~~~~---~g~~~~  308 (399)
                      ..++..+..+..+ ..++++..++|+|++|+|++++.+++++...|  ++||+++ +.+|+.|+++.+.+.   +|.+.+
T Consensus       251 ~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~  329 (404)
T 1i24_A          251 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVK  329 (404)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCcc
Confidence            1233334445433 22334566799999999999999999876556  7999998 789999999999998   888877


Q ss_pred             eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHH
Q 015872          309 VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDL  388 (399)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~  388 (399)
                      +..+|...              .+           .....+..|+++++ +|||+|+  .+++++++++++|+....+.+
T Consensus       330 ~~~~p~~~--------------~~-----------~~~~~~~~d~~k~~-~LG~~p~--~~~~~~l~~~~~~~~~~~~~~  381 (404)
T 1i24_A          330 KMTVPNPR--------------VE-----------AEEHYYNAKHTKLM-ELGLEPH--YLSDSLLDSLLNFAVQFKDRV  381 (404)
T ss_dssp             EEEECCSS--------------CS-----------CSSCCCCBCCCHHH-HTTCCCC--CCCHHHHHHHHHHHHHTGGGC
T ss_pred             ccccCccc--------------Cc-----------cccceEecCHHHHH-HcCCCcC--cCHHHHHHHHHHHHHhhhhcc
Confidence            66655421              00           01122345778887 6999998  789999999999987666554


Q ss_pred             h
Q 015872          389 K  389 (399)
Q Consensus       389 ~  389 (399)
                      .
T Consensus       382 ~  382 (404)
T 1i24_A          382 D  382 (404)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-37  Score=286.10  Aligned_cols=255  Identities=17%  Similarity=0.131  Sum_probs=205.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      .++|||||||||||+++++.|+++|++|++++|+                .+|++|.+++.++++  ++|+|||+|+...
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   75 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHTA   75 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            4789999999999999999999999999999996                389999999999998  8999999998432


Q ss_pred             -------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------CCCcHHHHHHHHHHHHHhCCCC
Q 015872          161 -------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFLQDSGLP  220 (399)
Q Consensus       161 -------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~~g~~  220 (399)
                             +....++|+.++.+++++|++.++ +||++||.+++..             +.++|+.+|..+|+++++.+.+
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~  154 (292)
T 1vl0_A           76 VDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPK  154 (292)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC
Confidence                   344567899999999999999998 9999999865422             4578999999999999998889


Q ss_pred             EEEEecCccccc---ccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHH
Q 015872          221 HVIIRLCGFMQG---LIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       221 ~~ilRp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                      ++++||+.+||.   ++..+...+..+..+...+ +...+++|++|+|++++.+++++  .+++||+++++.+|+.|+++
T Consensus       155 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~  231 (292)
T 1vl0_A          155 YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH-DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICSWYDFAV  231 (292)
T ss_dssp             EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES-SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCEEHHHHHH
T ss_pred             eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeec-CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCccHHHHHH
Confidence            999999999965   1112222233343332222 45669999999999999999886  57899999999999999999


Q ss_pred             HHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH
Q 015872          298 LCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY  377 (399)
Q Consensus       298 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~  377 (399)
                      .+.+.+|.+.++..+|.+..          ...            ......+..|+++++++|||+|+   +++|+|+++
T Consensus       232 ~i~~~~g~~~~~~~~~~~~~----------~~~------------~~~~~~~~~d~~k~~~~lG~~p~---~~~~~l~~~  286 (292)
T 1vl0_A          232 EIFRLTGIDVKVTPCTTEEF----------PRP------------AKRPKYSVLRNYMLELTTGDITR---EWKESLKEY  286 (292)
T ss_dssp             HHHHHHCCCCEEEEECSTTS----------CCS------------SCCCSBCCBCCHHHHHTTCCCCC---BHHHHHHHH
T ss_pred             HHHHHhCCCCceeecccccc----------Ccc------------cCCCccccccHHHHHHHcCCCCC---CHHHHHHHH
Confidence            99999999877766654321          000            00122344678999999999997   999999999


Q ss_pred             HHHHH
Q 015872          378 FTNIL  382 (399)
Q Consensus       378 ~~~~~  382 (399)
                      ++|++
T Consensus       287 ~~~~~  291 (292)
T 1vl0_A          287 IDLLQ  291 (292)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99985

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.8e-36  Score=287.60  Aligned_cols=274  Identities=18%  Similarity=0.233  Sum_probs=208.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |+||||||+||||++++++|+++|++|++++|........   +.   ..+++++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            4799999999999999999999999999998753322111   11   2357899999999999988887  59999999


Q ss_pred             CCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------C-CCcHHHHHHHHHHHH
Q 015872          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------P-EVPLMEIKYCTEQFL  214 (399)
Q Consensus       156 a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~-~~~y~~~K~~~E~~l  214 (399)
                      ||...       +...+++|+.++.+++++|++.++++||++||.+++..             + ..+|+.+|..+|+++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            98432       23456789999999999999999999999999865421             2 568999999999987


Q ss_pred             Hh----C-CCCEEEEecCccccccc------------ccch---hhhcc--cc--cccc-----CCCCcceeceeHHHHH
Q 015872          215 QD----S-GLPHVIIRLCGFMQGLI------------GQYA---VPILE--EK--SVWG-----TDALTRIAYMDTQDIA  265 (399)
Q Consensus       215 ~~----~-g~~~~ilRp~~~~~~~~------------~~~~---~~~~~--~~--~~~~-----~~~~~~~~~v~v~Dva  265 (399)
                      +.    . +++++++||+++||...            ..+.   .....  +.  .+++     .++...++|+|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            54    3 79999999998886421            1111   11111  11  1222     1345567999999999


Q ss_pred             HHHHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 015872          266 RLTFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVL  343 (399)
Q Consensus       266 ~~i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
                      ++++.+++++  ...+++||+++++.+|+.|+++.+.+.+|.+.++...+..              +.+           
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~~-----------  295 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR--------------EGD-----------  295 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCC--------------TTC-----------
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCC--------------CCc-----------
Confidence            9999999763  2224799999999999999999999999988776554421              000           


Q ss_pred             ccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          344 TSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       344 ~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                        ...+..|+++++++|||+|+  ++++|+|+++++|++++.+
T Consensus       296 --~~~~~~d~~k~~~~lG~~p~--~~l~~~l~~~~~w~~~~~~  334 (338)
T 1udb_A          296 --LPAYWADASKADRELNWRVT--RTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_dssp             --CSBCCBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHCTT
T ss_pred             --hhhhhcCHHHHHHHcCCCcC--CCHHHHHHHHHHHHHhccc
Confidence              11233678899999999998  7999999999999976543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=9.9e-36  Score=285.05  Aligned_cols=281  Identities=16%  Similarity=0.196  Sum_probs=213.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCC-CCccccc----cCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRP-APADFLR----DWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~-~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |+||||||+||||+++++.|++. |++|++++|+.. .....+.    ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 799999999742 1122222    2368899999999999999998  99999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHc--CCc-------EEEEecccCCCC----------------------
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAM--GIQ-------KYVFYSIHNCDK----------------------  197 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~--~v~-------~~V~~Ss~~~~~----------------------  197 (399)
                      |+..       ....+.++|+.++.+++++|.+.  +++       +||++||..++.                      
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            9943       34456789999999999999998  887       999999975432                      


Q ss_pred             -CCCCcHHHHHHHHHHHHHh----CCCCEEEEecCcccccccc------cchhhhccccc--cccCCCCcceeceeHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLIG------QYAVPILEEKS--VWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dv  264 (399)
                       .+..+|+.+|..+|.+++.    .|++++++||+++|+....      .++..+..+..  +++. +....+++|++|+
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dv  239 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK-GDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT-SCCEEEEEEHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC-CceeEeeEEHHHH
Confidence             2456899999999998854    5999999999999976532      12333344433  2333 3455699999999


Q ss_pred             HHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhc
Q 015872          265 ARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLT  344 (399)
Q Consensus       265 a~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (399)
                      |++++.+++++. .|++||+++++.+|+.|+++.+.+.+|.+.+... |..         ....+..   .      ...
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~---------~~~~~~~---~------~~~  299 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYR---------EQITYVA---D------RPG  299 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGG---------GGEEEEC---C------CTT
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccc---------cceeecC---C------CCc
Confidence            999999998764 5789999999899999999999999986543221 110         0000000   0      001


Q ss_pred             cCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          345 SDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       345 ~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      .+..+..|+++++++|||+|+  ++++|+|+++++|++++...
T Consensus       300 ~~~~~~~d~~k~~~~lG~~p~--~~~~e~l~~~~~~~~~~~~~  340 (361)
T 1kew_A          300 HDRRYAIDAGKISRELGWKPL--ETFESGIRKTVEWYLANTQW  340 (361)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCS--CCHHHHHHHHHHHHHHCHHH
T ss_pred             ccceeecCHHHHHHHhCCCCc--cCHHHHHHHHHHHHHhcccc
Confidence            123345788999999999998  79999999999999876443

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=6.8e-36  Score=281.07  Aligned_cols=267  Identities=16%  Similarity=0.148  Sum_probs=205.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCC-
Q 015872           85 SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR-  159 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~-  159 (399)
                      +||||||+||||++++++|+++  |++|++++|+..+..      +++++.+|++|++++.++++  ++|+|||+|+.. 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            4999999999999999999998  899999999754321      57889999999999999998  899999999843 


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------CCCcHHHHHHHHHHHHH----h
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------PEVPLMEIKYCTEQFLQ----D  216 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------~~~~y~~~K~~~E~~l~----~  216 (399)
                           .+...+++|+.++.+++++|++.++++||++||.+++..              |.++|+.+|..+|++++    +
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~  154 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK  154 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh
Confidence                 234456789999999999999999999999999876432              45789999999998774    4


Q ss_pred             CCCCEEEEecCcccccccc----------cchhhhccccc-cccCCCCcceeceeHHHHHHHHHHHHhCCcc---CCcEE
Q 015872          217 SGLPHVIIRLCGFMQGLIG----------QYAVPILEEKS-VWGTDALTRIAYMDTQDIARLTFVALRNEKI---NGRTL  282 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~---~g~~~  282 (399)
                      .|++++++||+++|+....          ..+...+.++. ....+++..++++|++|+|++++.+++++..   .+++|
T Consensus       155 ~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~  234 (317)
T 3ajr_A          155 FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGY  234 (317)
T ss_dssp             HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCE
T ss_pred             cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceE
Confidence            6899999999999974311          11122223332 2223345667999999999999999987643   35899


Q ss_pred             EEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCC
Q 015872          283 TFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGV  362 (399)
Q Consensus       283 ~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~  362 (399)
                      |+++ +.+|+.|+++.+.+.+|. .++...+... .             .          +........|+++++++|||
T Consensus       235 ~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~-~-------------~----------~~~~~~~~~d~~k~~~~lG~  288 (317)
T 3ajr_A          235 NVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFR-D-------------K----------IAATWPESLDSSEASNEWGF  288 (317)
T ss_dssp             ECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHH-H-------------H----------HHTTSCSCBCCHHHHHHHCC
T ss_pred             ecCC-ccccHHHHHHHHHHHCCc-cccccccccc-h-------------h----------hccccccccCHHHHHHHcCC
Confidence            9997 579999999999999883 3343333200 0             0          00111123577999999999


Q ss_pred             CCCccccHHHHHHHHHHHHHHhh
Q 015872          363 DAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       363 ~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      +|+  ++++|+|+++++|+++.+
T Consensus       289 ~p~--~~~~~~l~~~~~~~~~~~  309 (317)
T 3ajr_A          289 SIE--YDLDRTIDDMIDHISEKL  309 (317)
T ss_dssp             CCC--CCHHHHHHHHHHHHHHHT
T ss_pred             CCC--CCHHHHHHHHHHHHHhhh
Confidence            998  799999999999997654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=3.5e-37  Score=287.49  Aligned_cols=260  Identities=17%  Similarity=0.113  Sum_probs=204.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCCCC--
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR--  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~~~--  159 (399)
                      |+|||||||||||++++++|+ +|++|++++|+..            ++.+|++|++++.+++++  +|+|||+|+..  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            479999999999999999999 8999999999741            357999999999999986  99999999843  


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                           .+...+++|+.++.+++++|++.++ +|||+||.+++.             .|.++|+.+|..+|+++++...++
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  146 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH  146 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSE
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCe
Confidence                 2334567899999999999999998 899999986542             235689999999999999888899


Q ss_pred             EEEecCcccccccc----cchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c-CCcEEEEcCCCCCCHHH
Q 015872          222 VIIRLCGFMQGLIG----QYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I-NGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       222 ~ilRp~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~-~g~~~~l~~~~~~s~~e  294 (399)
                      +++||+++|+....    .+...+..+..+...+ +..++++|++|+|++++.+++++.  . .+++||+++++.+|+.|
T Consensus       147 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e  225 (299)
T 1n2s_A          147 LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN-DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD  225 (299)
T ss_dssp             EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC-SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred             EEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec-CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHH
Confidence            99999999975432    2333333444332222 466799999999999999998762  2 47899999999999999


Q ss_pred             HHHHHHHHhCCCC------CeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc
Q 015872          295 VITLCERLAGQDA------NVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII  368 (399)
Q Consensus       295 ~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~  368 (399)
                      +++.+.+.+|.+.      .+..++...          +  +.          .......+..|+++++++|||+|+   
T Consensus       226 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~----------~--~~----------~~~~~~~~~~d~~k~~~~lG~~p~---  280 (299)
T 1n2s_A          226 YAALVFDEARKAGITLALTELNAVPTSA----------Y--PT----------PASRPGNSRLNTEKFQRNFDLILP---  280 (299)
T ss_dssp             HHHHHHHHHHHHTCCCCCCEEEEECSTT----------S--CC----------SSCCCSBCCBCCHHHHHHHTCCCC---
T ss_pred             HHHHHHHHhCCCcccccccccccccccc----------c--cC----------cCCCCCceeeeHHHHHHhcCCCCC---
Confidence            9999999998762      333333210          0  00          001123345788999999999998   


Q ss_pred             cHHHHHHHHHHHHHH
Q 015872          369 TLEKYLQDYFTNILK  383 (399)
Q Consensus       369 ~lee~l~~~~~~~~~  383 (399)
                      +++|+|+++++|+++
T Consensus       281 ~~~~~l~~~~~~~~~  295 (299)
T 1n2s_A          281 QWELGVKRMLTEMFT  295 (299)
T ss_dssp             BHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHh
Confidence            799999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-35  Score=285.18  Aligned_cols=292  Identities=13%  Similarity=0.118  Sum_probs=213.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----cccc-------ccCCcEEEEccCCCCCcHHHHhcC--C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFL-------RDWGATVVNADLSKPETIPATLVG--V  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l-------~~~~v~~~~~Dl~d~~~l~~~~~~--~  149 (399)
                      +|+||||||+||||+++++.|+++|++|++++|+....    ...+       ...+++++++|++|++++.+++++  +
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999975431    1112       123688999999999999999885  7


Q ss_pred             CEEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCC---cEEEEecccCCCC-------------CCCCcHHHH
Q 015872          150 HTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCDK-------------HPEVPLMEI  206 (399)
Q Consensus       150 d~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v---~~~V~~Ss~~~~~-------------~~~~~y~~~  206 (399)
                      |+|||+|+...       +....++|+.++.+++++|.+.++   ++||++||.+++.             .+..+|+.+
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  183 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  183 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence            99999999432       234567899999999999999998   8999999987643             245789999


Q ss_pred             HHHHHHHHHh----CCCCEEEEecCcccccccc---------cchhhhcccc-c-cccCCCCcceeceeHHHHHHHHHHH
Q 015872          207 KYCTEQFLQD----SGLPHVIIRLCGFMQGLIG---------QYAVPILEEK-S-VWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       207 K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~-~-~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      |..+|.+++.    .+++++++||+++|+....         .++..+..+. . +..++++..++|+|++|+|++++.+
T Consensus       184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  263 (375)
T 1t2a_A          184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  263 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence            9999998754    5899999999999864321         1222233343 2 2233446677999999999999999


Q ss_pred             HhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeee--cCHHHHHHHHHHhhhhh-hhhhhhhhhhhhhhhccCcc
Q 015872          272 LRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTM--VPVSVLRFTRQLTRFFE-WTNDVADRLAFSEVLTSDTV  348 (399)
Q Consensus       272 l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  348 (399)
                      ++++.  +++||+++++.+|+.|+++.+.+.+|.+.++..  +|.+.+.      ..+. ....... ..+.  ......
T Consensus       264 ~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~------~~~~~~~~~~~~-~~~~--~~~~~~  332 (375)
T 1t2a_A          264 LQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRC------KETGKVHVTVDL-KYYR--PTEVDF  332 (375)
T ss_dssp             HHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE------TTTCCEEEEECG-GGSC--SSCCCB
T ss_pred             HhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccc------cccccceeecCc-ccCC--cccchh
Confidence            98765  379999999999999999999999998755331  2222110      0000 0000000 0000  001122


Q ss_pred             ccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          349 FSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       349 ~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      +..|+++++++|||+|+  ++++|+|+++++|+.+..+.
T Consensus       333 ~~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~  369 (375)
T 1t2a_A          333 LQGDCTKAKQKLNWKPR--VAFDELVREMVHADVELMRT  369 (375)
T ss_dssp             CCBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCHHHHHHhcCCCcc--CCHHHHHHHHHHHHHHhhcc
Confidence            34678999999999998  79999999999999876544

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=100.00  E-value=3.2e-36  Score=281.19  Aligned_cols=278  Identities=19%  Similarity=0.231  Sum_probs=211.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      +|+|+||||||+||++++++|+++| ++|++++|+..+. ...+...+++++++|++|++++.++++++|+|||+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            4789999999999999999999998 9999999985543 1233446899999999999999999999999999998321


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC----CCCCcHHHHHHHHHHHHHhCCCCEEEEecCccccccccc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK----HPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ  236 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~----~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~  236 (399)
                      .. ..+.|+.++.+++++|++.|+++||++|+.+++.    .+..+|+.+|..+|+++++.|++++++||+++|+++...
T Consensus        85 ~~-~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~  163 (299)
T 2wm3_A           85 SC-SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSH  163 (299)
T ss_dssp             HT-CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTT
T ss_pred             cc-cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchhh
Confidence            11 2346788999999999999999999988876532    235789999999999999999999999999999987653


Q ss_pred             chhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhCC-ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeec
Q 015872          237 YAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRNE-KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMV  312 (399)
Q Consensus       237 ~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~  312 (399)
                      +.......+   .+....++.+++|++++|+|++++.++.++ ...|++|++++ +.+|+.|+++.+.+.+|+++++..+
T Consensus       164 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~  242 (299)
T 2wm3_A          164 FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKM  242 (299)
T ss_dssp             TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCC
T ss_pred             cCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEec
Confidence            333222222   122223567779999999999999999875 34688999987 5799999999999999999888888


Q ss_pred             CHHHHHHHHHHhhhhhhhh--hhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHH
Q 015872          313 PVSVLRFTRQLTRFFEWTN--DVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYF  378 (399)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~  378 (399)
                      |.+..+.       .+++.  .....+   ..+..+  ... .....+.+|.+|+   +|+|++++..
T Consensus       243 ~~~~~~~-------~g~~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~g~~~~---~~~~~~~~~~  294 (299)
T 2wm3_A          243 TPEDYEK-------LGFPGARDLANMF---RFYALR--PDR-DIELTLRLNPKAL---TLDQWLEQHK  294 (299)
T ss_dssp             CTHHHHT-------TCSTTHHHHHHHH---HHHTTC--CCC-CHHHHHHHCTTCC---CHHHHHHHHG
T ss_pred             CHHHHHh-------cCCCcHHHHHHHH---HHHHhc--CCC-CHHHHHHhCCCCC---CHHHHHHhCh
Confidence            8876542       12221  111111   111111  111 2334567899887   9999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=2.6e-35  Score=280.69  Aligned_cols=289  Identities=20%  Similarity=0.267  Sum_probs=207.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc------ccccCCcEEEEccCCCCCcHHHHhc--CCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKPETIPATLV--GVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~------~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~V  152 (399)
                      |.+|+||||||||+||++|++.|++.|++|++++|+......      .+...+++++.+|++|.+++.++++  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            556789999999999999999999999999999998533211      2234689999999999999999999  99999


Q ss_pred             EECCCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC------CCCCcHHHHHHHHHHHHHhCCCCEEEEe
Q 015872          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK------HPEVPLMEIKYCTEQFLQDSGLPHVIIR  225 (399)
Q Consensus       153 i~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~------~~~~~y~~~K~~~E~~l~~~g~~~~ilR  225 (399)
                      ||+++.        .|+.++.+++++|++.+ +++||+ |+.+...      .+..+|+.+|..+|+++++.|++++++|
T Consensus        88 i~~a~~--------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivr  158 (346)
T 3i6i_A           88 VSTVGG--------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYIC  158 (346)
T ss_dssp             EECCCG--------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEE
T ss_pred             EECCch--------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEE
Confidence            999984        48899999999999999 999997 6555431      3446799999999999999999999999


Q ss_pred             cCcccccccccchhhhc---ccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC-CCCCCHHHHHHHHH
Q 015872          226 LCGFMQGLIGQYAVPIL---EEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG-PRAWTTQEVITLCE  300 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~-~~~~s~~e~~~~~~  300 (399)
                      |+.+++.+...+.....   .+. ....++++.+++|++++|+|++++.++.++...+++|++.+ ++.+|+.|+++.++
T Consensus       159 pg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~  238 (346)
T 3i6i_A          159 CNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWE  238 (346)
T ss_dssp             CCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHH
T ss_pred             ecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHH
Confidence            99999866544333221   222 22233456677999999999999999999877788999986 47899999999999


Q ss_pred             HHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhh-hhhccCc--ccccc---cccccccc-CCCCCccccHHHH
Q 015872          301 RLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFS-EVLTSDT--VFSVP---MSETFDLL-GVDAKDIITLEKY  373 (399)
Q Consensus       301 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~---~~~~~~~L-G~~p~~~~~lee~  373 (399)
                      +++|.+.++..++.+........   .+++...  .+.+. .......  .|..+   ...+.+.+ ++++   ++++|+
T Consensus       239 ~~~g~~~~~~~~~~~~~~~~~~~---~~~p~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~---t~~~e~  310 (346)
T 3i6i_A          239 KKIGRTLPRVTVTEDDLLAAAGE---NIIPQSV--VAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSF---RTVEEC  310 (346)
T ss_dssp             HHHTSCCCEEEECHHHHHHHHHT---CCTTHHH--HHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCC---CCHHHH
T ss_pred             HHHCCCCceEecCHHHHHHHHhc---CCChhhh--HHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCc---CcHHHH
Confidence            99999999999988765333221   1112111  11111 1111111  12221   11222332 4555   499999


Q ss_pred             HHHHHHHHHHhhH
Q 015872          374 LQDYFTNILKKLK  386 (399)
Q Consensus       374 l~~~~~~~~~~~~  386 (399)
                      |++++.|+..+.+
T Consensus       311 l~~~~~~~~~~~~  323 (346)
T 3i6i_A          311 FGEYIVKMEEKQP  323 (346)
T ss_dssp             HHHHHCC------
T ss_pred             HHHHHHHhhcccc
Confidence            9999999877654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.1e-35  Score=284.42  Aligned_cols=269  Identities=13%  Similarity=0.152  Sum_probs=202.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhc-----CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLV-----GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vi  153 (399)
                      ++.|+|||||||||||++|+++|+++| ++|++++|+.... ...+.  ++. +.+|++|.+.+.++++     ++|+||
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc--Cce-EeeecCcHHHHHHHHhhcccCCCCEEE
Confidence            445789999999999999999999999 9999999975432 11121  334 7899999998988887     599999


Q ss_pred             ECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-------------CCCcHHHHHHHHHHHHH
Q 015872          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       154 ~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~  215 (399)
                      |+|+...     ....+++|+.++.+++++|++.++ +||++||..++..             |..+|+.+|..+|++++
T Consensus       121 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  199 (357)
T 2x6t_A          121 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVR  199 (357)
T ss_dssp             ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred             ECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHH
Confidence            9998432     234567999999999999999999 9999999876432             35689999999999885


Q ss_pred             h----CCCCEEEEecCcccccccc----------cchhhhcccccc--ccCCCCc-ceeceeHHHHHHHHHHHHhCCccC
Q 015872          216 D----SGLPHVIIRLCGFMQGLIG----------QYAVPILEEKSV--WGTDALT-RIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       216 ~----~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~-~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      +    .|++++++||+++|+....          .++..+..+..+  ++ +++. .++|+|++|+|++++.+++++.  
T Consensus       200 ~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~ai~~~~~~~~--  276 (357)
T 2x6t_A          200 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFE-GSENFKRDFVYVGDVADVNLWFLENGV--  276 (357)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEET-TGGGCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeC-CCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            4    5899999999999975421          122333344432  33 3345 6699999999999999998875  


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCC-CCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQD-ANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETF  357 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      +++||+++++.+|+.|+++.+.+.+|.+ +++...+...                 ..      .  .......|.++++
T Consensus       277 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------~~------~--~~~~~~~~~~k~~  331 (357)
T 2x6t_A          277 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL-----------------KG------R--YQAFTQADLTNLR  331 (357)
T ss_dssp             CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG-----------------TT------S--CCSBCCCCCHHHH
T ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc-----------------cc------c--cccccccCHHHHH
Confidence            7899999999999999999999999987 3333333210                 00      0  0112235667886


Q ss_pred             cccCC-CCCccccHHHHHHHHHHHHHHh
Q 015872          358 DLLGV-DAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       358 ~~LG~-~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      + ||| .|.  .+++|+|+++++|++++
T Consensus       332 ~-lG~~~~~--~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          332 A-AGYDKPF--KTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             H-TTCCCCC--CCHHHHHHHHHHHHC--
T ss_pred             H-cCCCCCC--CCHHHHHHHHHHHHhhc
Confidence            5 999 677  79999999999998643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.6e-35  Score=284.38  Aligned_cols=280  Identities=16%  Similarity=0.144  Sum_probs=212.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccc------cC-CcEEEEccCCCCCcHHHHhcC--C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLR------DW-GATVVNADLSKPETIPATLVG--V  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~------~~-~v~~~~~Dl~d~~~l~~~~~~--~  149 (399)
                      +|+||||||+||||++|++.|+++|++|++++|+..+.    ...+.      .. +++++.+|++|.+++.+++++  +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999975431    11111      11 688999999999999999885  6


Q ss_pred             CEEEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCc-----EEEEecccCCCC------------CCCCcHHH
Q 015872          150 HTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ-----KYVFYSIHNCDK------------HPEVPLME  205 (399)
Q Consensus       150 d~Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~-----~~V~~Ss~~~~~------------~~~~~y~~  205 (399)
                      |+|||+|+...       .....++|+.++.+++++|.+.+++     +|||+||.+++.            .+..+|+.
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  187 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHH
Confidence            99999999432       3345678999999999999998876     999999987642            34578999


Q ss_pred             HHHHHHHHHHh----CCCCEEEEecCcccccccc---------cchhhhcccc--ccccCCCCcceeceeHHHHHHHHHH
Q 015872          206 IKYCTEQFLQD----SGLPHVIIRLCGFMQGLIG---------QYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       206 ~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      +|..+|.+++.    .+++++++|++++|+....         .++..+..+.  .++.++++..++|+|++|+|++++.
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~  267 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL  267 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHH
Confidence            99999998754    5899999999998864321         1122233333  2222334566799999999999999


Q ss_pred             HHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCe-eecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccc
Q 015872          271 ALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANV-TMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVF  349 (399)
Q Consensus       271 ~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (399)
                      +++++.  +++||+++++.+|+.|+++.+.+.+|.+.+. ..+....             ..    .       .....+
T Consensus       268 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------~~----~-------~~~~~~  321 (381)
T 1n7h_A          268 MLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------------FR----P-------AEVDNL  321 (381)
T ss_dssp             HHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------------SC----S-------SCCCBC
T ss_pred             HHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCccc-------------CC----c-------cccccc
Confidence            998765  4799999999999999999999999976321 1111100             00    0       011123


Q ss_pred             cccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          350 SVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       350 ~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      ..|+++++++|||+|+  ++++|+|+++++|+.+..+..+.
T Consensus       322 ~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~~~~  360 (381)
T 1n7h_A          322 QGDASKAKEVLGWKPQ--VGFEKLVKMMVDEDLELAKREKV  360 (381)
T ss_dssp             CBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHhcCCccc--CCHHHHHHHHHHHHHhhccccce
Confidence            3578999999999997  79999999999999887765443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=3.2e-35  Score=279.45  Aligned_cols=294  Identities=15%  Similarity=0.146  Sum_probs=213.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-cccc----cCCcEEEEccCCCCCcHHHHhcC--CCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLR----DWGATVVNADLSKPETIPATLVG--VHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~~l~----~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~  154 (399)
                      +.|+|||||||||||++++++|+++|++|++++|+..+.. ..+.    ..+++++.+|++|++++.+++++  +|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            4578999999999999999999999999999999855421 1111    12688999999999999999885  699999


Q ss_pred             CCCCC-------CCCcchhccHHHHHHHHHHHHHcCC-cEEEEecccCCC-------------CCCCCcHHHHHHHHHHH
Q 015872          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       155 ~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v-~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~~  213 (399)
                      +|+..       ......++|+.++.+++++|.+.++ ++||++||..++             ..+..+|+.+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99943       2334567899999999999999997 899999998643             23456899999999998


Q ss_pred             HHh----CCCCEEEEecCccccccccc-c--------hhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccC
Q 015872          214 LQD----SGLPHVIIRLCGFMQGLIGQ-Y--------AVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKIN  278 (399)
Q Consensus       214 l~~----~g~~~~ilRp~~~~~~~~~~-~--------~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~  278 (399)
                      ++.    .+++++++|+.++++..... .        +..+..+.  ..+...++..++++|++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            754    58999999999888643211 1        11222332  2223334556699999999999999998764  


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeee--cCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccc
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAGQDANVTM--VPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET  356 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      +++||+++++.+|+.|+++.+.+.+|.+.++..  +|.+.+.  .....   ........ .+  .......+..|++++
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~~~~~---~~~~~~~~-~~--~~~~~~~~~~d~~k~  311 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGID--RNTGK---VIVEVSEE-FF--RPAEVDILVGNPEKA  311 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--TTTCC---EEEEECGG-GS--CSSCCCBCCBCCHHH
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccccc--ccccc---cccccCcc-cC--CCCCcceeecCHHHH
Confidence            379999999999999999999999998755432  2221100  00000   00000000 00  000112234578999


Q ss_pred             ccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       357 ~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      +++|||+|+  ++++|+|+++++|+.+..+.
T Consensus       312 ~~~lG~~p~--~~~~~~l~~~~~~~~~~~~~  340 (345)
T 2z1m_A          312 MKKLGWKPR--TTFDELVEIMMEADLKRVRD  340 (345)
T ss_dssp             HHHHCCCCC--SCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHcCCccc--CCHHHHHHHHHHHHHHHhcc
Confidence            999999998  79999999999999877655

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1e-35  Score=278.85  Aligned_cols=265  Identities=13%  Similarity=0.167  Sum_probs=188.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCC-ccccccCCcEEEEccCCCCCcHHHHhcC-----CCEEEECCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVG-----VHTVIDCAT  157 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d~~~l~~~~~~-----~d~Vi~~a~  157 (399)
                      +|||||||||||++++++|+++| ++|++++|+.... ...+.  +++ +.+|++|.+.+.+++++     +|+|||+|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~   77 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence            49999999999999999999999 9999999975432 11121  334 78999999989998875     999999998


Q ss_pred             CCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh---
Q 015872          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD---  216 (399)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l~~---  216 (399)
                      ...     ...+.++|+.++.+++++|++.++ +||++||.+++.             .|..+|+.+|..+|+++++   
T Consensus        78 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  156 (310)
T 1eq2_A           78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP  156 (310)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred             cccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            432     234567999999999999999999 999999986542             2356899999999998854   


Q ss_pred             -CCCCEEEEecCcccccccc----------cchhhhcccccc--ccCCCCc-ceeceeHHHHHHHHHHHHhCCccCCcEE
Q 015872          217 -SGLPHVIIRLCGFMQGLIG----------QYAVPILEEKSV--WGTDALT-RIAYMDTQDIARLTFVALRNEKINGRTL  282 (399)
Q Consensus       217 -~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~-~~~~v~v~Dva~~i~~~l~~~~~~g~~~  282 (399)
                       .|++++++||+++|+....          .++..+..+..+  ++ +++. .++|+|++|+|++++.+++++.  +++|
T Consensus       157 ~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~  233 (310)
T 1eq2_A          157 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFE-GSENFKRDFVYVGDVADVNLWFLENGV--SGIF  233 (310)
T ss_dssp             GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------------CBCEEEHHHHHHHHHHHHHHCC--CEEE
T ss_pred             HcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEec-CCCcceEccEEHHHHHHHHHHHHhcCC--CCeE
Confidence             5899999999999975432          122333344432  33 3345 6699999999999999998875  7899


Q ss_pred             EEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCC
Q 015872          283 TFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGV  362 (399)
Q Consensus       283 ~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~  362 (399)
                      |+++++.+|+.|+++.+.+.+|.+ ++..++.+..            ..         ..  .......|.+++++ |||
T Consensus       234 ~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~------------~~---------~~--~~~~~~~~~~~~~~-lG~  288 (310)
T 1eq2_A          234 NLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDK------------LK---------GR--YQAFTQADLTNLRA-AGY  288 (310)
T ss_dssp             EESCSCCBCHHHHHHHC---------------------------------------------CCCSCCBCCHHHHH-TTC
T ss_pred             EEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChh------------hh---------cc--cccccccchHHHHh-cCC
Confidence            999999999999999999999987 3333222110            00         00  01112346677765 999


Q ss_pred             -CCCccccHHHHHHHHHHHHHH
Q 015872          363 -DAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       363 -~p~~~~~lee~l~~~~~~~~~  383 (399)
                       +|.  .+++|+|+++++|+++
T Consensus       289 ~~~~--~~l~~~l~~~~~~~~~  308 (310)
T 1eq2_A          289 DKPF--KTVAEGVTEYMAWLNR  308 (310)
T ss_dssp             CCCC--CCHHHHHHHHHHHTC-
T ss_pred             CCCC--CCHHHHHHHHHHHHHh
Confidence             677  7999999999999864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.5e-34  Score=277.12  Aligned_cols=295  Identities=12%  Similarity=0.062  Sum_probs=209.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-----CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC---CCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG---VHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-----~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~d~Vi~~  155 (399)
                      |+|||||||||||++++++|+++|     ++|++++|+.....  +...+++++.+|++|.+++.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            689999999999999999999999     99999999865433  2345789999999999999999998   9999999


Q ss_pred             CCCCC--CCcchhccHHHHHHHHHHHHHc--CCcEEE-------EecccCCCCC---------------C-CCcHHHHHH
Q 015872          156 ATGRP--EEPIKKVDWEGKVALIQCAKAM--GIQKYV-------FYSIHNCDKH---------------P-EVPLMEIKY  208 (399)
Q Consensus       156 a~~~~--~~~~~~~n~~~~~~l~~aa~~~--~v~~~V-------~~Ss~~~~~~---------------~-~~~y~~~K~  208 (399)
                      |+...  +....++|+.++.+++++|++.  ++++||       |+||.+++..               + ..+|.....
T Consensus        80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~~~E~  159 (364)
T 2v6g_A           80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLED  159 (364)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHHHHHH
T ss_pred             CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhHHHHH
Confidence            98432  3456789999999999999998  899998       7888765321               1 345744333


Q ss_pred             HHHHHHHhCC-CCEEEEecCcccccccccc--------hhhhc---cccccc-cCCC---CcceeceeHHHHHHHHHHHH
Q 015872          209 CTEQFLQDSG-LPHVIIRLCGFMQGLIGQY--------AVPIL---EEKSVW-GTDA---LTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       209 ~~E~~l~~~g-~~~~ilRp~~~~~~~~~~~--------~~~~~---~~~~~~-~~~~---~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .++++.++.+ ++++++||+++||......        +...+   .+..+. .+++   ...++++|++|+|++++.++
T Consensus       160 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~  239 (364)
T 2v6g_A          160 IMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAA  239 (364)
T ss_dssp             HHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHH
Confidence            3333333466 9999999999997533211        12222   333322 2222   23368899999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCee--ecCHHHHHHHHHHhh-------hhhhhhhhhhhhh---hh
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVT--MVPVSVLRFTRQLTR-------FFEWTNDVADRLA---FS  340 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---~~  340 (399)
                      +++...|++||+++++.+|+.|+++.+.+.+|.+....  .+|.+..+..+....       ..+........+.   +.
T Consensus       240 ~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (364)
T 2v6g_A          240 VDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFG  319 (364)
T ss_dssp             HCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHH
T ss_pred             hCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchh
Confidence            98765688999999989999999999999999876655  666655443322110       1110010000110   00


Q ss_pred             hhhccCcc-ccccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          341 EVLTSDTV-FSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       341 ~~~~~~~~-~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      ... .+.. +..|++++++ |||+|.  .+++|+|+++++|+++.
T Consensus       320 ~~~-~~~~~~~~d~~k~~~-lG~~p~--~~~~e~l~~~~~~~~~~  360 (364)
T 2v6g_A          320 DVI-LGNECFLDSMNKSKE-HGFLGF--RNSKNAFISWIDKAKAY  360 (364)
T ss_dssp             HHH-HTSCCCCBCCHHHHH-TTCCCC--CCHHHHHHHHHHHHHHT
T ss_pred             hhc-cccchhhcchHHHHh-cCCCCC--CCHHHHHHHHHHHHHHc
Confidence            000 0123 3467789987 999987  79999999999999653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-35  Score=281.66  Aligned_cols=300  Identities=15%  Similarity=0.148  Sum_probs=208.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccccc------cCCcEEEEccCCCCCcHHHHhcC--CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLR------DWGATVVNADLSKPETIPATLVG--VH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~l~------~~~v~~~~~Dl~d~~~l~~~~~~--~d  150 (399)
                      +|+||||||+||||++++++|+++|++|++++|+....    ...+.      ..+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            37899999999999999999999999999999975431    11111      23688899999999999999885  79


Q ss_pred             EEEECCCCCCC-------CcchhccHHHHHHHHHHHHHcCC---cEEEEecccCCCC-------------CCCCcHHHHH
Q 015872          151 TVIDCATGRPE-------EPIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCDK-------------HPEVPLMEIK  207 (399)
Q Consensus       151 ~Vi~~a~~~~~-------~~~~~~n~~~~~~l~~aa~~~~v---~~~V~~Ss~~~~~-------------~~~~~y~~~K  207 (399)
                      +|||+|+....       ....++|+.++.+++++|++.++   ++||++||..++.             .+..+|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99999984221       12346899999999999999998   7999999986542             2457899999


Q ss_pred             HHHHHHHHh----CCCCEEEEecCcccccccc---------cchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          208 YCTEQFLQD----SGLPHVIIRLCGFMQGLIG---------QYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       208 ~~~E~~l~~----~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+|.+++.    .+++++++|++++|+....         .++..+..+.  .+..++++..++|+|++|+|++++.++
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~  240 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML  240 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHH
Confidence            999998753    5899999999998864321         1222333343  223334466679999999999999999


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeee--cCHH-HHHHHHHHhhh-hhhhhhhhhhhhhh-hhhccCc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTM--VPVS-VLRFTRQLTRF-FEWTNDVADRLAFS-EVLTSDT  347 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~--~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~  347 (399)
                      +++.  +++||+++++.+|+.|+++.+.+.+|.+.++..  +|.+ .+.... ..+. ..+.......+... .......
T Consensus       241 ~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (372)
T 1db3_A          241 QQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT-GHDAPGVKPGDVIIAVDPRYFRPAEVE  317 (372)
T ss_dssp             SSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEEC-SSSCTTCCTTCEEEEECGGGCCCCC-C
T ss_pred             hcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccc-cccccccccccceeeccccccCCCchh
Confidence            8764  479999999999999999999999997654332  1110 000000 0000 00000000000000 0000112


Q ss_pred             cccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          348 VFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       348 ~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      .+..|+++++++|||+|+  ++++|+|+++++|+.+..+.
T Consensus       318 ~~~~d~~k~~~~lG~~p~--~~l~e~l~~~~~~~~~~~~~  355 (372)
T 1db3_A          318 TLLGDPTKAHEKLGWKPE--ITLREMVSEMVANDLEAAKK  355 (372)
T ss_dssp             CCCBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHHT
T ss_pred             hhccCHHHHHHHhCCccc--cCHHHHHHHHHHHHHHhhhc
Confidence            234688999999999998  79999999999999877654

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=9.1e-35  Score=301.77  Aligned_cols=282  Identities=18%  Similarity=0.218  Sum_probs=213.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc------cccCCcEEEEccCCCCCcHHHHhc--CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF------LRDWGATVVNADLSKPETIPATLV--GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~------l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~  151 (399)
                      .+++|+||||||+||||++|+++|+++|++|++++|........      +...+++++++|++|++++.++++  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            45568999999999999999999999999999999975432211      123478899999999999999998  8999


Q ss_pred             EEECCCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-----------------CCCCcHHHHH
Q 015872          152 VIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----------------HPEVPLMEIK  207 (399)
Q Consensus       152 Vi~~a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-----------------~~~~~y~~~K  207 (399)
                      |||+|+...       ....+++|+.++.+++++|++.++++||++||.+++.                 .+..+|+.+|
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK  167 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK  167 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHH
Confidence            999998432       2345679999999999999999999999999987642                 1346899999


Q ss_pred             HHHHHHHHh------CCCCEEEEecCccccccc------------cc---chhhhccc--cc--cccC-----CCCccee
Q 015872          208 YCTEQFLQD------SGLPHVIIRLCGFMQGLI------------GQ---YAVPILEE--KS--VWGT-----DALTRIA  257 (399)
Q Consensus       208 ~~~E~~l~~------~g~~~~ilRp~~~~~~~~------------~~---~~~~~~~~--~~--~~~~-----~~~~~~~  257 (399)
                      ..+|+++++      .+++++++||+.+|+...            ..   ++..+..+  ..  +++.     +++..++
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  247 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD  247 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEEC
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEe
Confidence            999998854      689999999999986421            11   11222222  22  3331     3466779


Q ss_pred             ceeHHHHHHHHHHHHhCC------ccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhh
Q 015872          258 YMDTQDIARLTFVALRNE------KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTN  331 (399)
Q Consensus       258 ~v~v~Dva~~i~~~l~~~------~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (399)
                      |||++|+|++++.+++..      ...+++||+++++.+|+.|+++.+++.+|.+.++...+..              ..
T Consensus       248 ~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--------------~~  313 (699)
T 1z45_A          248 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR--------------AG  313 (699)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------------------
T ss_pred             eEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCC--------------CC
Confidence            999999999999998752      2235799999999999999999999999988665433211              00


Q ss_pred             hhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          332 DVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      +             ...+..|+++++++|||+|+  ++++|+|+++++|++++......
T Consensus       314 ~-------------~~~~~~d~~ka~~~LG~~p~--~~l~egl~~~~~w~~~~~~~~~~  357 (699)
T 1z45_A          314 D-------------VLNLTAKPDRAKRELKWQTE--LQVEDSCKDLWKWTTENPFGYQL  357 (699)
T ss_dssp             --------------CCCCCBCCHHHHHHTCCCCC--CCHHHHHHHHHHHHHHCTTCSCC
T ss_pred             c-------------cccccCCHHHHHHhcCCCCC--CCHHHHHHHHHHHHHhCCcchhh
Confidence            0             11234678899999999998  79999999999999877655433

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.7e-34  Score=273.09  Aligned_cols=275  Identities=17%  Similarity=0.138  Sum_probs=207.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-------CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g-------~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~  151 (399)
                      .+++|+||||||+||||++++++|+++|       ++|++++|+...... ....+++++.+|++|++++.++++ ++|+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            3556899999999999999999999999       899999997543322 123368889999999999999994 8999


Q ss_pred             EEECCCCC------CCCcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCCCCC-------------CCCcHHHHH
Q 015872          152 VIDCATGR------PEEPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNCDKH-------------PEVPLMEIK  207 (399)
Q Consensus       152 Vi~~a~~~------~~~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~~~~-------------~~~~y~~~K  207 (399)
                      |||+|+..      .+...+++|+.++.+++++|++.+     +++||++||.+++..             +..+|+.+|
T Consensus        90 vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  169 (342)
T 2hrz_A           90 IFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK  169 (342)
T ss_dssp             EEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHH
T ss_pred             EEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHH
Confidence            99999943      233446789999999999999887     889999999876532             567899999


Q ss_pred             HHHHHHHHh----CCCCEEEEecCcccccc-c---------ccchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHH
Q 015872          208 YCTEQFLQD----SGLPHVIIRLCGFMQGL-I---------GQYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       208 ~~~E~~l~~----~g~~~~ilRp~~~~~~~-~---------~~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+|+++++    .+++++++|++.++++. .         ..++..+..+... ...+++.+..++|++|+|++++.++
T Consensus       170 ~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~  249 (342)
T 2hrz_A          170 AICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGA  249 (342)
T ss_dssp             HHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHH
Confidence            999998754    47899999999888521 1         1122233344432 2233356668999999999999999


Q ss_pred             hCCcc---CCcEEEEcCCCCCCHHHHHHHHHHHhCCCC--CeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCc
Q 015872          273 RNEKI---NGRTLTFSGPRAWTTQEVITLCERLAGQDA--NVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDT  347 (399)
Q Consensus       273 ~~~~~---~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (399)
                      +.+..   .+++||+++ +.+|+.|+++.+.+.+|.+.  .+...|.....                      ... ...
T Consensus       250 ~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~----------------------~~~-~~~  305 (342)
T 2hrz_A          250 MIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKAVALIRREPNEMIM----------------------RMC-EGW  305 (342)
T ss_dssp             HSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH----------------------HHH-TTS
T ss_pred             hccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCcccccceeeccCcchh----------------------hhh-ccc
Confidence            87643   468999965 67999999999999999764  23333322110                      000 011


Q ss_pred             cccccccccccccCCCCCccccHHHHHHHHHHHHH
Q 015872          348 VFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       348 ~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~  382 (399)
                      ....|++++++ |||+|+  ++++|+|+++++|++
T Consensus       306 ~~~~d~~k~~~-lG~~p~--~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          306 APGFEAKRARE-LGFTAE--SSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CCCBCCHHHHH-TTCCCC--SSHHHHHHHHHHHHS
T ss_pred             ccccChHHHHH-cCCCCC--CCHHHHHHHHHHHhc
Confidence            11257789988 999998  799999999999985

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.1e-34  Score=273.29  Aligned_cols=268  Identities=17%  Similarity=0.188  Sum_probs=195.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc--cc---ccc--CCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DF---LRD--WGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~---l~~--~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      ++++||||||+||||++++++|+++||+|++++|+.....  ..   +..  .+++++++|++|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            3578999999999999999999999999999999754311  11   111  2478899999999999999999999999


Q ss_pred             CCCCCCC------CcchhccHHHHHHHHHHHHHcC-CcEEEEecccCC-CC-----------------------CCCCcH
Q 015872          155 CATGRPE------EPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC-DK-----------------------HPEVPL  203 (399)
Q Consensus       155 ~a~~~~~------~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~-~~-----------------------~~~~~y  203 (399)
                      +|+....      ..+.++|+.++.+++++|.+.+ ++||||+||.++ +.                       .+.++|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            9984321      1356789999999999999988 899999999762 21                       023469


Q ss_pred             HHHHHHHHHHHH----hCCCCEEEEecCcccccccccch----hhh---cccc-ccccCCCCcceeceeHHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQYA----VPI---LEEK-SVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       204 ~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~~~----~~~---~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      +.+|..+|.++.    +.|++++++||+++|+......+    ...   ..+. ..+... . ...|+|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-R-QGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-T-EEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-C-CCCEEEHHHHHHHHHHH
Confidence            999999998763    46999999999999986532211    111   1111 122211 1 23599999999999999


Q ss_pred             HhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCC-CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccc
Q 015872          272 LRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ-DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFS  350 (399)
Q Consensus       272 l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (399)
                      ++++.. ++.|+++++ .+|++|+++.+.+.++. +++....               ....             ....+.
T Consensus       242 ~~~~~~-~~~~~~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---------------~~~~-------------~~~~~~  291 (337)
T 2c29_D          242 FENPKA-EGRYICSSH-DCIILDLAKMLREKYPEYNIPTEFK---------------GVDE-------------NLKSVC  291 (337)
T ss_dssp             HHCTTC-CEEEEECCE-EEEHHHHHHHHHHHCTTSCCCSCCT---------------TCCT-------------TCCCCE
T ss_pred             hcCccc-CceEEEeCC-CCCHHHHHHHHHHHCCCccCCCCCC---------------cccC-------------CCcccc
Confidence            987654 347877664 58999999999998742 2111000               0000             012233


Q ss_pred             ccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          351 VPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       351 ~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      .|++++ ++|||+|+  ++++|+|+++++|+++.
T Consensus       292 ~d~~k~-~~lG~~p~--~~l~e~l~~~~~~~~~~  322 (337)
T 2c29_D          292 FSSKKL-TDLGFEFK--YSLEDMFTGAVDTCRAK  322 (337)
T ss_dssp             ECCHHH-HHHTCCCC--CCHHHHHHHHHHHHHHT
T ss_pred             ccHHHH-HHcCCCcC--CCHHHHHHHHHHHHHHc
Confidence            577888 78999998  79999999999999754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=5.3e-34  Score=268.67  Aligned_cols=268  Identities=20%  Similarity=0.248  Sum_probs=192.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEec-CCCC--Ccccccc-----CCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPA--PADFLRD-----WGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r-~~~~--~~~~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |+|||||||||||++++++|+++|++|++++| +...  ....+..     .+++++++|++|++++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            68999999999999999999999999999998 5322  1111111     14678899999999999999999999999


Q ss_pred             CCCCC------CCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCC-CC----------------------CCC-cHH
Q 015872          156 ATGRP------EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD-KH----------------------PEV-PLM  204 (399)
Q Consensus       156 a~~~~------~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~-~~----------------------~~~-~y~  204 (399)
                      |+...      ...+.++|+.|+.+++++|.+. ++++||++||..+. ..                      |.. +|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            97321      2236789999999999999998 79999999997631 10                      111 699


Q ss_pred             HHHHHHHHHHH----hCCCCEEEEecCcccccccccc----hh---hhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          205 EIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQY----AV---PILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       205 ~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+|..+|.++.    +.|++++++||+++|++.....    ..   ....+......  ..+++|+|++|+|++++.+++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~i~v~Dva~a~~~~~~  239 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIG--VTRFHMVHVDDVARAHIYLLE  239 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCC--EEEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCc--CCCcCEEEHHHHHHHHHHHhh
Confidence            99999998764    4799999999999998653221    11   11222211111  133489999999999999998


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                      ++...| .|| ++++.+|+.|+++.+.+..+. .   .+|...         .+   ...          .....+..|+
T Consensus       240 ~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~-~---~~~~~~---------~~---~~~----------~~~~~~~~d~  291 (322)
T 2p4h_X          240 NSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPE-Y---QILTVD---------EL---KEI----------KGARLPDLNT  291 (322)
T ss_dssp             SCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTT-S---CCCCTT---------TT---TTC----------CCEECCEECC
T ss_pred             CcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCC-C---CCCCCc---------cc---cCC----------CCCcceeccc
Confidence            765445 488 556789999999999887642 1   112110         00   000          0012234677


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      +++ ++|||+|+  ++++|+|+++++|++++
T Consensus       292 ~k~-~~lG~~p~--~~~~~~l~~~~~~~~~~  319 (322)
T 2p4h_X          292 KKL-VDAGFDFK--YTIEDMFDDAIQCCKEK  319 (322)
T ss_dssp             HHH-HHTTCCCC--CCHHHHHHHHHHHHHHH
T ss_pred             HHH-HHhCCccC--CCHHHHHHHHHHHHHhc
Confidence            899 66999998  79999999999999643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=2.6e-34  Score=272.80  Aligned_cols=268  Identities=15%  Similarity=0.153  Sum_probs=194.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc-----ccc-cCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-----FLR-DWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~-----~l~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      +|+||||||+||||++|+++|+++||+|++++|+..+...     .+. ..+++++++|++|++++.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            5789999999999999999999999999999997543211     111 2368899999999999999999999999999


Q ss_pred             CCCC------CCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCC------CCC----------------C----CCcH
Q 015872          157 TGRP------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC------DKH----------------P----EVPL  203 (399)
Q Consensus       157 ~~~~------~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~------~~~----------------~----~~~y  203 (399)
                      +...      ...+.++|+.|+.+++++|.+.+ ++||||+||.++      ...                +    ..+|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            8321      12367899999999999999986 999999999651      000                1    1259


Q ss_pred             HHHHHHHHHHHH----hCCCCEEEEecCcccccccccc----hhhh---ccccc-cccCC-----CCcceeceeHHHHHH
Q 015872          204 MEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQY----AVPI---LEEKS-VWGTD-----ALTRIAYMDTQDIAR  266 (399)
Q Consensus       204 ~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~~----~~~~---~~~~~-~~~~~-----~~~~~~~v~v~Dva~  266 (399)
                      +.+|..+|+++.    +.|++++++||+++|++.....    +..+   ..+.. .++..     ....++|+|++|+|+
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCR  248 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHH
Confidence            999999998764    3689999999999998653221    1111   12221 11110     012348999999999


Q ss_pred             HHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCC-CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhcc
Q 015872          267 LTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ-DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTS  345 (399)
Q Consensus       267 ~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (399)
                      +++.+++++.. ++.|+++++ .+|+.|+++.+.+..+. +++...                   ....          .
T Consensus       249 a~~~~~~~~~~-~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~~~-------------------~~~~----------~  297 (338)
T 2rh8_A          249 AHIFVAEKESA-SGRYICCAA-NTSVPELAKFLSKRYPQYKVPTDF-------------------GDFP----------P  297 (338)
T ss_dssp             HHHHHHHCTTC-CEEEEECSE-EECHHHHHHHHHHHCTTSCCCCCC-------------------TTSC----------S
T ss_pred             HHHHHHcCCCc-CCcEEEecC-CCCHHHHHHHHHHhCCCCCCCCCC-------------------CCCC----------c
Confidence            99999987654 457888765 58999999999988752 211110                   0000          0


Q ss_pred             CccccccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          346 DTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       346 ~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      +..+..|++++ ++|||+|+  ++++|+|+++++|+++.
T Consensus       298 ~~~~~~d~~k~-~~lG~~p~--~~l~~gl~~~~~~~~~~  333 (338)
T 2rh8_A          298 KSKLIISSEKL-VKEGFSFK--YGIEEIYDESVEYFKAK  333 (338)
T ss_dssp             SCSCCCCCHHH-HHHTCCCS--CCHHHHHHHHHHHHHHT
T ss_pred             CcceeechHHH-HHhCCCCC--CCHHHHHHHHHHHHHHc
Confidence            11134677888 66999998  79999999999999644

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=2.1e-34  Score=296.82  Aligned_cols=289  Identities=15%  Similarity=0.196  Sum_probs=214.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCc-HHHHhcCCCEEEECCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPATLVGVHTVIDCATGR  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~-l~~~~~~~d~Vi~~a~~~  159 (399)
                      ++|+|||||||||||++++++|+++ |++|++++|+..+....+...+++++.+|++|.++ +.++++++|+|||+|+..
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~  393 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA  393 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence            5679999999999999999999998 89999999986554433344578999999999865 777889999999999843


Q ss_pred             C-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------------CCCCcHHHHHHHHHH
Q 015872          160 P-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       160 ~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~~y~~~K~~~E~  212 (399)
                      .       +...+++|+.++.+++++|++.+ ++|||+||.+++.                    .+.++|+.+|..+|+
T Consensus       394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~  472 (660)
T 1z7e_A          394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR  472 (660)
T ss_dssp             CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHH
T ss_pred             CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHH
Confidence            3       23455789999999999999999 8999999976531                    122369999999999


Q ss_pred             HHH----hCCCCEEEEecCcccccccc--------------cchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHh
Q 015872          213 FLQ----DSGLPHVIIRLCGFMQGLIG--------------QYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       213 ~l~----~~g~~~~ilRp~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      +++    +.|++++++||+++||....              .++..+..+..+. .++++..++|+|++|+|++++.+++
T Consensus       473 ~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~  552 (660)
T 1z7e_A          473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE  552 (660)
T ss_dssp             HHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh
Confidence            884    46999999999999975431              2233344444332 2233566799999999999999998


Q ss_pred             CCc--cCCcEEEEcCCC-CCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccc
Q 015872          274 NEK--INGRTLTFSGPR-AWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFS  350 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~-~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (399)
                      ++.  ..|++||+++++ .+|+.|+++.+.+.+|.+.....+|.....         . .......+.  ..........
T Consensus       553 ~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~---------~-~~~~~~~~~--~~~~~~~~~~  620 (660)
T 1z7e_A          553 NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF---------R-VVESSSYYG--KGYQDVEHRK  620 (660)
T ss_dssp             CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCE---------E-EECTHHHHC--TTCCCCSCCC
T ss_pred             CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccc---------c-chhcccccc--ccccchhhcc
Confidence            764  467899999986 799999999999999875433333321000         0 000000000  0000112234


Q ss_pred             ccccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          351 VPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       351 ~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      .|+++++++|||+|+  ++++|+|+++++|++++.
T Consensus       621 ~d~~ka~~~LG~~p~--~~l~egl~~~i~~~~~~~  653 (660)
T 1z7e_A          621 PSIRNAHRCLDWEPK--IDMQETIDETLDFFLRTV  653 (660)
T ss_dssp             BCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHTTS
T ss_pred             cCHHHHHHhcCCCcc--CcHHHHHHHHHHHHHhhc
Confidence            678999999999998  799999999999997654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-34  Score=266.63  Aligned_cols=229  Identities=21%  Similarity=0.334  Sum_probs=184.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----cc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----AD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      +|+|+||||||+||+++++.|+++|++|++++|+....    ..   .+...+++++++|++|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            46899999999999999999999999999999985431    11   123458999999999999999999999999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC-------CC-CCcHHHHHHHHHHHHHhCCCCEEEEec
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK-------HP-EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~-------~~-~~~y~~~K~~~E~~l~~~g~~~~ilRp  226 (399)
                      ++....    ..|+.++.+++++|+++| ++|||+ |+.+...       .| ...| .+|..+|+++++.|++++++||
T Consensus        84 a~~~~~----~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ilrp  157 (313)
T 1qyd_A           84 LAGGVL----SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYTYVSS  157 (313)
T ss_dssp             CCCSSS----STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBCEEEC
T ss_pred             Cccccc----hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeEEEEe
Confidence            985432    246788999999999999 999996 6555321       12 2346 9999999999999999999999


Q ss_pred             Ccccccccccchhhh----cccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHH
Q 015872          227 CGFMQGLIGQYAVPI----LEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCE  300 (399)
Q Consensus       227 ~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~  300 (399)
                      +.+++++...+....    ..++.+ ...+++.++++++++|+|++++.+++++...|++|++.++ +.+|+.|+++.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~  237 (313)
T 1qyd_A          158 NMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWE  237 (313)
T ss_dssp             CEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHH
T ss_pred             ceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHH
Confidence            999887665443321    222222 2233467789999999999999999987666788888875 6899999999999


Q ss_pred             HHhCCCCCeeecCHHHH
Q 015872          301 RLAGQDANVTMVPVSVL  317 (399)
Q Consensus       301 ~~~g~~~~~~~~~~~~~  317 (399)
                      +.+|++.++..+|.+..
T Consensus       238 ~~~g~~~~~~~~~~~~~  254 (313)
T 1qyd_A          238 RLSEQNLDKIYISSQDF  254 (313)
T ss_dssp             HHHTCCCEECCBCSHHH
T ss_pred             HhcCCCCceEECCHHHH
Confidence            99999999988887654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1e-34  Score=275.65  Aligned_cols=269  Identities=14%  Similarity=0.141  Sum_probs=199.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEE-EccCCCCCcHHHHhcCCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVV-NADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~-~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .+++|+||||||+||||++++++|+++|++|++++|+..+......      ..+++++ .+|++|.+++.++++++|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            3456899999999999999999999999999999997433211100      1367888 89999999999999999999


Q ss_pred             EECCCCC----CCCcchhccHHHHHHHHHHHHH-cCCcEEEEecccCCCCC-----------------------------
Q 015872          153 IDCATGR----PEEPIKKVDWEGKVALIQCAKA-MGIQKYVFYSIHNCDKH-----------------------------  198 (399)
Q Consensus       153 i~~a~~~----~~~~~~~~n~~~~~~l~~aa~~-~~v~~~V~~Ss~~~~~~-----------------------------  198 (399)
                      ||+|+..    .+....++|+.++.+++++|.+ .++++||++||..++..                             
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  167 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence            9999843    2334567899999999999984 67899999999866421                             


Q ss_pred             ----CCCcHHHHHHHHHHHHHh------CCCCEEEEecCcccccccc---------cchhhhcccccc--ccCCCCccee
Q 015872          199 ----PEVPLMEIKYCTEQFLQD------SGLPHVIIRLCGFMQGLIG---------QYAVPILEEKSV--WGTDALTRIA  257 (399)
Q Consensus       199 ----~~~~y~~~K~~~E~~l~~------~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~  257 (399)
                          +.++|+.+|..+|++++.      .+++++++||+++|+....         .++..+..+...  ++.+  ...+
T Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  245 (342)
T 1y1p_A          168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM--PPQY  245 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC--CSEE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC--CcCC
Confidence                124699999999998754      2788999999999975432         223334444432  3332  3459


Q ss_pred             ceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhh
Q 015872          258 YMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRL  337 (399)
Q Consensus       258 ~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (399)
                      |+|++|+|++++.+++++...|+.+.. +++.+|+.|+++.+.+.+|.+ ++ ..+.               +..     
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~~~-~g~~~s~~e~~~~i~~~~~~~-~~-~~~~---------------~~~-----  302 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRVYG-TAGTFDWNTVLATFRKLYPSK-TF-PADF---------------PDQ-----  302 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEE-CCEEECHHHHHHHHHHHCTTS-CC-CCCC---------------CCC-----
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceEEE-eCCCCCHHHHHHHHHHHCCCc-cC-CCCC---------------Ccc-----
Confidence            999999999999999876555665544 446799999999999999875 22 1110               000     


Q ss_pred             hhhhhhccCccccccccccccccCC---CCCccccHHHHHHHHHHHHH
Q 015872          338 AFSEVLTSDTVFSVPMSETFDLLGV---DAKDIITLEKYLQDYFTNIL  382 (399)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~LG~---~p~~~~~lee~l~~~~~~~~  382 (399)
                             .......|+++++++|||   .+.  ++++|+|+++++|++
T Consensus       303 -------~~~~~~~d~~k~~~~lg~~~~~~~--~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          303 -------GQDLSKFDTAPSLEILKSLGRPGW--RSIEESIKDLVGSET  341 (342)
T ss_dssp             -------CCCCCEECCHHHHHHHHHTTCCSC--CCHHHHHHHHHCCSC
T ss_pred             -------ccccccCChHHHHHHHhhcccCCc--CCHHHHHHHHHHHhh
Confidence                   011133578899999987   344  699999999998863

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=2.2e-33  Score=274.99  Aligned_cols=294  Identities=13%  Similarity=0.149  Sum_probs=206.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-----------------cccccCCcEEEEccCCCCCcH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-----------------DFLRDWGATVVNADLSKPETI  142 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-----------------~~l~~~~v~~~~~Dl~d~~~l  142 (399)
                      .+.+|+||||||||+||++|+++|++.|++|++++|+.....                 ......+++++.+|++|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            345689999999999999999999999999999999855210                 001124799999999998888


Q ss_pred             HHHhcCCCEEEECCCC----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC--C------------------CC
Q 015872          143 PATLVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--D------------------KH  198 (399)
Q Consensus       143 ~~~~~~~d~Vi~~a~~----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~------------------~~  198 (399)
                      . .+.++|+|||+|+.    .++....++|+.++.+++++|.+ ++++||++||..+  .                  ..
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccccccccCCC
Confidence            8 77899999999984    34566778999999999999999 8899999999876  0                  22


Q ss_pred             CCCcHHHHHHHHHHHHHh---CCCCEEEEecCccccccccc-------------chhhhccccccccCCCCcceeceeHH
Q 015872          199 PEVPLMEIKYCTEQFLQD---SGLPHVIIRLCGFMQGLIGQ-------------YAVPILEEKSVWGTDALTRIAYMDTQ  262 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~~---~g~~~~ilRp~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~v~  262 (399)
                      +.+.|+.+|..+|+++++   .|++++++||+++|+.....             ++..+..+..+....++..++|++++
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  303 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD  303 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH
Confidence            668899999999999866   79999999999999754332             12222233333322246677999999


Q ss_pred             HHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhh
Q 015872          263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEV  342 (399)
Q Consensus       263 Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (399)
                      |+|++++.++.++. .+++||+++++.+++.|+++.+.+ +|  .+.+..+.+...+...     + ..+....+ ....
T Consensus       304 DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~-----~-~~~~~~~~-~~~~  372 (427)
T 4f6c_A          304 TTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQ-----D-MYETIGLT-SVDR  372 (427)
T ss_dssp             HHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHT-----T-CHHHHHHH-HHHH
T ss_pred             HHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhc-----C-chhhhhhh-hccc
Confidence            99999999999877 789999999999999999999998 66  4444444333322211     0 00000000 0011


Q ss_pred             hccCccccccccccc---cccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          343 LTSDTVFSVPMSETF---DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       343 ~~~~~~~~~~~~~~~---~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                        ....+..|..+..   +.+|+.+.  ..-+++++++++++.+.+++...
T Consensus       373 --~~~~~~~d~~~~~~~l~~~G~~~~--~~~~~~l~~~~~~l~~~~~~~~~  419 (427)
T 4f6c_A          373 --EQQLAMIDTTLTLKIMNHISEKWP--TITNNWLYHWAQYIKTIFNKAAA  419 (427)
T ss_dssp             --TSEECEECCHHHHHHHHHTTCCCC--CCCHHHHHHHHHHHHHHHC----
T ss_pred             --cCCceeccHHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHHhhhhh
Confidence              1112334444444   56799877  23377999999998887764443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=100.00  E-value=3.7e-33  Score=262.71  Aligned_cols=280  Identities=17%  Similarity=0.256  Sum_probs=203.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+||||||+||+++++.|+++|++|++++|+.......   +...+++++++|++|++++.++++++|+|||+++..
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            35899999999999999999999999999999986533221   234689999999999999999999999999999842


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCCC---C----CCcHHHHHHHHHHHHHhCCCCEEEEecCcccc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKH---P----EVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ  231 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~---~----~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~  231 (399)
                              ++.++.+++++|++.+ ++|||+ |+.+....   +    ...| .+|..+|+++++.+++++++||+.+++
T Consensus        91 --------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A           91 --------QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEEANIPYTYVSANCFAS  160 (318)
T ss_dssp             --------GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECCEEHH
T ss_pred             --------hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcceehh
Confidence                    2467899999999998 999985 65553211   1    1246 999999999999999999999999888


Q ss_pred             cccccchhhhcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHHHHhCCCCCe
Q 015872          232 GLIGQYAVPILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERLAGQDANV  309 (399)
Q Consensus       232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~~~~g~~~~~  309 (399)
                      +++..+......+..+ ....++.++++++++|+|++++.+++++...+++|++.++ +.+|+.|+++.+.+.+|+++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  240 (318)
T 2r6j_A          161 YFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKK  240 (318)
T ss_dssp             HHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             hhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCce
Confidence            7655443333333322 2233466789999999999999999987666788888764 6899999999999999999999


Q ss_pred             eecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCc--cccccc--ccccccc-CCCCCccccHHHHHHHHHH
Q 015872          310 TMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDT--VFSVPM--SETFDLL-GVDAKDIITLEKYLQDYFT  379 (399)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~L-G~~p~~~~~lee~l~~~~~  379 (399)
                      ..+|.+........   .+.+...... .+...+....  .|..+.  ..+++.+ |.++.   +++|+|++++.
T Consensus       241 ~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~l~~~~~  308 (318)
T 2r6j_A          241 IHVPEEEIVALTKE---LPEPENIPIA-ILHCLFIDGATMSYDFKENDVEASTLYPELKFT---TIDELLDIFVH  308 (318)
T ss_dssp             EEECHHHHHHHHHH---SCTTTHHHHH-HHHHHHTSCTTTSSCCCTTCEEGGGTCTTCCCC---CHHHHHHHHHH
T ss_pred             eecCHHHHHHHHhc---CCCcchhhhh-eeeeEEecCCCCCCCcccccchHHHhCCCCccc---cHHHHHHHHhc
Confidence            99988765332211   1111111111 1112221111  132221  1344555 56665   99999998763

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=2.4e-33  Score=280.68  Aligned_cols=295  Identities=14%  Similarity=0.167  Sum_probs=208.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-----------------cccccCCcEEEEccCCCCCcHHHH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-----------------DFLRDWGATVVNADLSKPETIPAT  145 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-----------------~~l~~~~v~~~~~Dl~d~~~l~~~  145 (399)
                      +|+|||||||||||++|+++|++.|++|++++|+..+..                 ......+++++.+|+.|++.+. +
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  228 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  228 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence            579999999999999999999999999999999855210                 0112347999999999988888 7


Q ss_pred             hcCCCEEEECCCC----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC--C------------------CCCCC
Q 015872          146 LVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--D------------------KHPEV  201 (399)
Q Consensus       146 ~~~~d~Vi~~a~~----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~------------------~~~~~  201 (399)
                      +.++|+|||+|+.    .++..+.++|+.++.+++++|++ ++++|||+||.++  +                  ..+.+
T Consensus       229 ~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~  307 (508)
T 4f6l_B          229 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTS  307 (508)
T ss_dssp             SSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCS
T ss_pred             ccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCCC
Confidence            7899999999983    34566778999999999999999 7789999999877  1                  12567


Q ss_pred             cHHHHHHHHHHHHHh---CCCCEEEEecCccccccccc-------------chhhhccccccccCCCCcceeceeHHHHH
Q 015872          202 PLMEIKYCTEQFLQD---SGLPHVIIRLCGFMQGLIGQ-------------YAVPILEEKSVWGTDALTRIAYMDTQDIA  265 (399)
Q Consensus       202 ~y~~~K~~~E~~l~~---~g~~~~ilRp~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  265 (399)
                      +|+.+|..+|+++++   .|++++++||+.+||.....             ++......+.+....++..++|++++|+|
T Consensus       308 ~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA  387 (508)
T 4f6l_B          308 PYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTA  387 (508)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHH
Confidence            899999999999865   79999999999999754322             12223333333333346778999999999


Q ss_pred             HHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhcc
Q 015872          266 RLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTS  345 (399)
Q Consensus       266 ~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (399)
                      ++++.++.++. .+++||+++++.+++.|+++.+.+..   ++.+..+.+...+...     +. .+   .+.+...-..
T Consensus       388 ~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~-----~~-~~---~~~~~~~~~~  454 (508)
T 4f6l_B          388 RQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQ-----DM-YE---TIGLTSVDRE  454 (508)
T ss_dssp             HHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTT-----CC-HH---HHHHHHTGGG
T ss_pred             HHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhc-----CC-cc---chhccccccc
Confidence            99999999877 78999999999999999999999864   4444444443322211     00 00   0000000001


Q ss_pred             Cccccccccccc---cccCCCCCccccHHHHHHHHHHHHHHhhHHHhhhccc
Q 015872          346 DTVFSVPMSETF---DLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ  394 (399)
Q Consensus       346 ~~~~~~~~~~~~---~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~~~~  394 (399)
                      ...+..|..+..   +.+|+.+.  ..-+++++++++++.+.++..+..+..
T Consensus       455 ~~~~~~d~~~~~~~l~~~G~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~  504 (508)
T 4f6l_B          455 QQLAMIDTTLTLKIMNHISEKWP--TITNNWLYHWAQYIKTIFNKAAALEHH  504 (508)
T ss_dssp             SEECEECCHHHHHHHHHHSCCCC--CCCHHHHHHHHHHHHHHHC--------
T ss_pred             CcceecchHHHHHHHHHcCCCCC--CCCHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            112234444443   56799877  344889999999998887655554443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=100.00  E-value=7.5e-33  Score=260.89  Aligned_cols=226  Identities=22%  Similarity=0.328  Sum_probs=180.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC-CC----Cccc---cccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PA----PADF---LRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~-~~----~~~~---l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +|+|+||||||+||+++++.|+++|++|++++|+. ..    ....   +...+++++++|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            46799999999999999999999999999999985 21    1111   2345899999999999999999999999999


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC---CC----CCcHHHHHHHHHHHHHhCCCCEEEEec
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK---HP----EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~---~~----~~~y~~~K~~~E~~l~~~g~~~~ilRp  226 (399)
                      +++...        +.++.+++++|++.| ++|||+ |+.+...   .+    ...| .+|..+|+++++.+++++++||
T Consensus        84 ~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp  153 (321)
T 3c1o_A           84 ALPFPM--------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVSA  153 (321)
T ss_dssp             CCCGGG--------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEEC
T ss_pred             CCCccc--------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEEe
Confidence            998421        567899999999999 999984 6554321   11    2357 9999999999999999999999


Q ss_pred             Ccccccccccchhh---hcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHHH
Q 015872          227 CGFMQGLIGQYAVP---ILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCER  301 (399)
Q Consensus       227 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~~  301 (399)
                      +.+++++...+...   ...++.+ ....++.++++++++|+|++++.++.++...|++|++.++ +.+|+.|+++.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~  233 (321)
T 3c1o_A          154 NCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEA  233 (321)
T ss_dssp             CEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHH
T ss_pred             ceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHH
Confidence            99988765433221   1222222 2233466779999999999999999987766888998864 78999999999999


Q ss_pred             HhCCCCCeeecCHHHHH
Q 015872          302 LAGQDANVTMVPVSVLR  318 (399)
Q Consensus       302 ~~g~~~~~~~~~~~~~~  318 (399)
                      .+|+++++..+|.+...
T Consensus       234 ~~g~~~~~~~~~~~~~~  250 (321)
T 3c1o_A          234 KSGLSFKKVHMPDEQLV  250 (321)
T ss_dssp             HHTSCCCEEEECHHHHH
T ss_pred             HcCCcceeeeCCHHHHH
Confidence            99999999999876543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6.9e-33  Score=248.01  Aligned_cols=207  Identities=17%  Similarity=0.194  Sum_probs=164.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC-CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR-PE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~-~~  161 (399)
                      +|+||||||||+||+++++.|+++|++|++++|+..+... +. .+++++++|++|++++.++++++|+|||+++.. ..
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-EN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-CC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-cc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            4789999999999999999999999999999998554322 22 579999999999999999999999999999843 33


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC------------CCCCCcHHHHHHHHHHHH---H-hCCCCEEEEe
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------------KHPEVPLMEIKYCTEQFL---Q-DSGLPHVIIR  225 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~------------~~~~~~y~~~K~~~E~~l---~-~~g~~~~ilR  225 (399)
                      ..+.++|+.++.+++++|++.++++||++||.++.            ..|..+|+.+|...|.++   . +.+++++++|
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr  161 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS  161 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence            44778899999999999999999999999998753            234678999999999665   3 5789999999


Q ss_pred             cCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          226 LCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      |+++|++........ ......... ++. .+++|++|+|++++.+++++...|++|+++++++.++++
T Consensus       162 p~~v~g~~~~~~~~~-~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          162 PAADMRPGVRTGRYR-LGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHHH  227 (227)
T ss_dssp             CCSEEESCCCCCCCE-EESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC---
T ss_pred             CCcccCCCcccccee-ecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccCC
Confidence            999997643221111 111111111 222 599999999999999999998889999999999988763

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=100.00  E-value=2.5e-32  Score=255.59  Aligned_cols=226  Identities=23%  Similarity=0.315  Sum_probs=180.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC------Ccc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------PAD---FLRDWGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~------~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +|+|+||||||+||+++++.|+++|++|++++|+...      ...   .+...+++++++|++|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            4689999999999999999999999999999998511      111   1234589999999999999999999999999


Q ss_pred             ECCCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCC------CC-CCcHHHHHHHHHHHHHhCCCCEEEEe
Q 015872          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK------HP-EVPLMEIKYCTEQFLQDSGLPHVIIR  225 (399)
Q Consensus       154 ~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~------~~-~~~y~~~K~~~E~~l~~~g~~~~ilR  225 (399)
                      |+++...        +.++.+++++|++.| ++|||+ |+.+...      .| ...| .+|..+|+++++.+++++++|
T Consensus        82 ~~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lr  151 (307)
T 2gas_A           82 CAAGRLL--------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLC  151 (307)
T ss_dssp             ECSSSSC--------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEE
T ss_pred             ECCcccc--------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCeEEEE
Confidence            9998432        567899999999998 999984 6555321      12 2357 999999999999999999999


Q ss_pred             cCcccccccccchhh---hcccccc-ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHH
Q 015872          226 LCGFMQGLIGQYAVP---ILEEKSV-WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCE  300 (399)
Q Consensus       226 p~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~  300 (399)
                      |+.+++++...+...   ......+ ...+++.++++++++|+|++++.++.++...+++|++.++ +.+|++|+++.+.
T Consensus       152 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~  231 (307)
T 2gas_A          152 CHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWE  231 (307)
T ss_dssp             CCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             cceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHH
Confidence            999988765443322   1122222 1223466779999999999999999987666788888765 6799999999999


Q ss_pred             HHhCCCCCeeecCHHHHH
Q 015872          301 RLAGQDANVTMVPVSVLR  318 (399)
Q Consensus       301 ~~~g~~~~~~~~~~~~~~  318 (399)
                      +.+|++.++..+|.+...
T Consensus       232 ~~~g~~~~~~~~~~~~~~  249 (307)
T 2gas_A          232 KKIGKTLEKTYVSEEQVL  249 (307)
T ss_dssp             HHHTSCCEEEEECHHHHH
T ss_pred             HHhCCCCceeecCHHHHH
Confidence            999999999999876543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.6e-32  Score=254.51  Aligned_cols=263  Identities=16%  Similarity=0.099  Sum_probs=186.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC--
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE--  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~--  161 (399)
                      |||||||||||||++|+++|+++||+|++++|++.+.          .+..|    +...+.++++|+|||+|+....  
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------RITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------EEEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------eeecc----hhhHhhccCCCEEEEeccCcccch
Confidence            6899999999999999999999999999999974331          12222    1234567899999999983211  


Q ss_pred             ---------CcchhccHHHHHHHHHHHHHcCCc--EEEEecccCCCCC-------------CCCcHHHHHHHHHHHH--H
Q 015872          162 ---------EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNCDKH-------------PEVPLMEIKYCTEQFL--Q  215 (399)
Q Consensus       162 ---------~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l--~  215 (399)
                               ..+.+.|+.+|.+|++++++.+++  +||+.||.+++..             +...|...+...|...  .
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~  146 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLP  146 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCS
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhh
Confidence                     234567999999999999998765  5888888766432             2234666666666543  4


Q ss_pred             hCCCCEEEEecCcccccc---cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCH
Q 015872          216 DSGLPHVIIRLCGFMQGL---IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTT  292 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~  292 (399)
                      +.+++++++||+.+|+..   +..+......+.....+++++.++|||++|+|++++.+++++... ++||+++++++|+
T Consensus       147 ~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~-g~yn~~~~~~~t~  225 (298)
T 4b4o_A          147 GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVH-GVLNGVAPSSATN  225 (298)
T ss_dssp             SSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCC-EEEEESCSCCCBH
T ss_pred             ccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCC-CeEEEECCCccCH
Confidence            578999999999999753   222333333333333344566779999999999999999988654 5999999999999


Q ss_pred             HHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHH
Q 015872          293 QEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEK  372 (399)
Q Consensus       293 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee  372 (399)
                      +|+++.+++++|++. +.++|.+.++...      +...  .      ..+..+..  ..+.+++ ++||+++.. +++|
T Consensus       226 ~e~~~~ia~~lgrp~-~~pvP~~~~~~~~------g~~~--~------~~~l~~~r--v~~~kl~-~~Gf~f~yp-~l~~  286 (298)
T 4b4o_A          226 AEFAQTFGAALGRRA-FIPLPSAVVQAVF------GRQR--A------IMLLEGQK--VIPRRTL-ATGYQYSFP-ELGA  286 (298)
T ss_dssp             HHHHHHHHHHHTCCC-CCCBCHHHHHHHH------CHHH--H------HHHHCCCC--BCCHHHH-HTTCCCSCC-SHHH
T ss_pred             HHHHHHHHHHhCcCC-cccCCHHHHHHHh------cchh--H------HHhhCCCE--EcHHHHH-HCCCCCCCC-CHHH
Confidence            999999999999875 4578887765421      1000  0      11111111  2346664 689998732 7999


Q ss_pred             HHHHHHHH
Q 015872          373 YLQDYFTN  380 (399)
Q Consensus       373 ~l~~~~~~  380 (399)
                      +|++.+++
T Consensus       287 al~~l~~~  294 (298)
T 4b4o_A          287 ALKEIAEN  294 (298)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99988764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-33  Score=260.08  Aligned_cols=226  Identities=22%  Similarity=0.361  Sum_probs=180.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--c------cccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--A------DFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--~------~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +|+|+||||||+||+++++.|+++|++|++++|+....  .      ..+...+++++++|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            46899999999999999999999999999999985432  1      122346899999999999999999999999999


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCCCCC------C-CCcHHHHHHHHHHHHHhCCCCEEEEec
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKH------P-EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~~~~------~-~~~y~~~K~~~E~~l~~~g~~~~ilRp  226 (399)
                      +++..        ++.++.+++++|+++| ++|||+ |+.+....      | ...| .+|..+|+++++.+++++++||
T Consensus        84 ~a~~~--------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~  153 (308)
T 1qyc_A           84 TVGSL--------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSS  153 (308)
T ss_dssp             CCCGG--------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEEC
T ss_pred             CCcch--------hhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHhcCCCeEEEEe
Confidence            99842        2467889999999998 999985 66553211      2 1346 9999999999999999999999


Q ss_pred             Ccccccccccchhh---hccccc-cccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC-CCCCHHHHHHHHHH
Q 015872          227 CGFMQGLIGQYAVP---ILEEKS-VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCER  301 (399)
Q Consensus       227 ~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~-~~~s~~e~~~~~~~  301 (399)
                      +.+++++...+...   ...++. ....+++.++++++++|+|++++.+++++...+++|++.++ +.+|++|+++.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~  233 (308)
T 1qyc_A          154 NCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEK  233 (308)
T ss_dssp             CEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHH
T ss_pred             ceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHH
Confidence            99987665433221   112222 12233467789999999999999999887666788998765 67999999999999


Q ss_pred             HhCCCCCeeecCHHHHH
Q 015872          302 LAGQDANVTMVPVSVLR  318 (399)
Q Consensus       302 ~~g~~~~~~~~~~~~~~  318 (399)
                      .+|+++++..+|.+...
T Consensus       234 ~~g~~~~~~~~~~~~~~  250 (308)
T 1qyc_A          234 KIDKTLEKAYVPEEEVL  250 (308)
T ss_dssp             HTTSCCEEEEECHHHHH
T ss_pred             HhCCCCceEeCCHHHHH
Confidence            99999999999876543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=1.3e-32  Score=247.84  Aligned_cols=210  Identities=20%  Similarity=0.231  Sum_probs=172.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCc-EEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v-~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..++.|+|+||||||+||++++++|+++|++|++++|+.++ ...+...++ +++++|++  +++.++++++|+|||+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHH-HHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence            35667899999999999999999999999999999998543 333445588 99999999  788899999999999999


Q ss_pred             CCC---CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC-----CCCcHHHHHHHHHHHHHhCCCCEEEEecCcc
Q 015872          158 GRP---EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGF  229 (399)
Q Consensus       158 ~~~---~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~-----~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~  229 (399)
                      ...   ....+++|+.++.+++++|++.++++||++||.+....     +..+|+.+|..+|+++++.|++++++||+++
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v  173 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL  173 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEEEEECSE
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            543   33455789999999999999999999999999876543     4568999999999999999999999999999


Q ss_pred             cccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHH
Q 015872          230 MQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCE  300 (399)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~  300 (399)
                      +++......       .... ..+...++++++|+|++++.+++++...|++|+++++ .++++|+++.++
T Consensus       174 ~~~~~~~~~-------~~~~-~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          174 SNEESTGKV-------TVSP-HFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             ECSCCCSEE-------EEES-SCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             cCCCCCCeE-------Eecc-CCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence            976432211       1111 2233468999999999999999998778899999988 599999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.7e-32  Score=242.93  Aligned_cols=199  Identities=17%  Similarity=0.245  Sum_probs=169.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC-CCcHHHHhcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK-PETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      |+||||||||+||+++++.|+++|++|++++|+..+....   .+++++++|++| ++++.++++++|+|||+||... .
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~-~   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG-K   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT-S
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC-C
Confidence            4799999999999999999999999999999985543322   589999999999 9999999999999999999654 3


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC---------CCcHHHHHHHHHHHH-HhCCCCEEEEecCccccc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP---------EVPLMEIKYCTEQFL-QDSGLPHVIIRLCGFMQG  232 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~---------~~~y~~~K~~~E~~l-~~~g~~~~ilRp~~~~~~  232 (399)
                      ...++|+.++.+++++|++.++++||++||.++....         ..+|+.+|..+|+++ ++.+++++++||++++++
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~  156 (219)
T 3dqp_A           77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEE  156 (219)
T ss_dssp             SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECS
T ss_pred             CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecC
Confidence            4678999999999999999999999999998775432         458999999999999 889999999999999976


Q ss_pred             ccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHH
Q 015872          233 LIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITL  298 (399)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~  298 (399)
                      .....+        .+   ++...++++++|+|++++.+++++...|++||+++++ .+++|+++.
T Consensus       157 ~~~~~~--------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          157 EATGLI--------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             CCCSEE--------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred             CCCCcc--------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence            432111        11   1455699999999999999999987778999998875 899988764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=100.00  E-value=1.5e-31  Score=255.00  Aligned_cols=228  Identities=21%  Similarity=0.310  Sum_probs=180.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-ccccc-CCcEEEEcc-CCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLRD-WGATVVNAD-LSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~~l~~-~~v~~~~~D-l~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .+|+|+||||||+||+++++.|+++|++|++++|+..+.. ..+.. .+++++.+| ++|++++.++++++|+|||+++.
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            3578999999999999999999999999999999855431 22222 378999999 99999999999999999999874


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcC-CcEEEEecccCC--C-CCCCCcHHHHHHHHHHHHHhCCCCEEEEecCccccccc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC--D-KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~--~-~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~  234 (399)
                      ..    ...|..+ ++++++|++.+ +++||++||...  + ..+..+|+.+|..+|+++++.+++++++||+.+..+..
T Consensus        84 ~~----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~  158 (352)
T 1xgk_A           84 QA----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFT  158 (352)
T ss_dssp             TT----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred             CC----cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEecceecCCch
Confidence            32    1346666 99999999999 999999999852  2 24567899999999999999999999999875443332


Q ss_pred             ccc---hh-hh-ccccccc--cCCCCcceeceeH-HHHHHHHHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          235 GQY---AV-PI-LEEKSVW--GTDALTRIAYMDT-QDIARLTFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       235 ~~~---~~-~~-~~~~~~~--~~~~~~~~~~v~v-~Dva~~i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                      ..+   +. .. ..+...+  ..+++.+++++|+ +|+|++++.+++++  ...|++||+++ +.+|+.|+++.+.+.+|
T Consensus       159 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G  237 (352)
T 1xgk_A          159 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALN  237 (352)
T ss_dssp             SSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHT
T ss_pred             hcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHC
Confidence            211   11 11 1222211  3335677899999 89999999999875  23689999996 57999999999999999


Q ss_pred             CCCCeeecCHH
Q 015872          305 QDANVTMVPVS  315 (399)
Q Consensus       305 ~~~~~~~~~~~  315 (399)
                      ++.++..+|.+
T Consensus       238 ~~~~~~~vp~~  248 (352)
T 1xgk_A          238 RRVTYVQVPKV  248 (352)
T ss_dssp             SCEEEEECSSC
T ss_pred             CCCceEECCHH
Confidence            99888888844

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.98  E-value=9.3e-32  Score=269.34  Aligned_cols=268  Identities=15%  Similarity=0.119  Sum_probs=185.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC--
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP--  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~--  160 (399)
                      +|+|||||||||||++|++.|+++||+|++++|+..+.         ..+.+|+.+  .+.++++++|+|||+|+...  
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTS--CCTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccc--hhHHhcCCCCEEEECCCCcccc
Confidence            57999999999999999999999999999999985542         126788865  34667889999999998431  


Q ss_pred             ------CCcchhccHHHHHHHHHH-HHHcCCcEEEEecccCCCC-------------CCCCcHHHHHHHHHHHH---HhC
Q 015872          161 ------EEPIKKVDWEGKVALIQC-AKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFL---QDS  217 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~a-a~~~~v~~~V~~Ss~~~~~-------------~~~~~y~~~K~~~E~~l---~~~  217 (399)
                            ...+.++|+.++.+++++ +++.++++|||+||.+++.             .+...|+..|...|..+   ++.
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~  295 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDA  295 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhC
Confidence                  123457899999999999 6777899999999987654             13457899999888654   568


Q ss_pred             CCCEEEEecCcccccc---cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          218 GLPHVIIRLCGFMQGL---IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       218 g~~~~ilRp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      |++++++||+++|+..   +..+...+..+.....++++..++|+|++|+|++++.+++++.. +++||+++++.+|+.|
T Consensus       296 gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~~~~~s~~e  374 (516)
T 3oh8_A          296 GKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINAVAPNPVSNAD  374 (516)
T ss_dssp             TCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEESCSCCEEHHH
T ss_pred             CCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEEECCCCCCHHH
Confidence            9999999999999743   22222223333323333456677999999999999999998764 4599999999999999


Q ss_pred             HHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCcccc-HHHH
Q 015872          295 VITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIIT-LEKY  373 (399)
Q Consensus       295 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~-lee~  373 (399)
                      +++.+++.+|.+. ...+|.+..+...         .+..    ....+..  ....++++++ .|||+|+  .+ ++++
T Consensus       375 l~~~i~~~~g~~~-~~~~p~~~~~~~~---------g~~~----~~~~~~~--~~~~~~~kl~-~lG~~~~--~~~l~e~  435 (516)
T 3oh8_A          375 MTKILATSMHRPA-FIQIPSLGPKILL---------GSQG----AEELALA--SQRTAPAALE-NLSHTFR--YTDIGAA  435 (516)
T ss_dssp             HHHHTTC-------------------------------CC----GGGGGGC--EEEECCHHHH-HTTCCCS--CSSHHHH
T ss_pred             HHHHHHHHhCCCC-CCCCCHHHHHHHh---------CCch----hHHHhhc--CCeechHHHH-HCCCCCC--CCCHHHH
Confidence            9999999999875 4455554433210         0000    0001111  1124456776 6899998  55 9999


Q ss_pred             HHHHHHHH
Q 015872          374 LQDYFTNI  381 (399)
Q Consensus       374 l~~~~~~~  381 (399)
                      |++++++.
T Consensus       436 l~~~l~~~  443 (516)
T 3oh8_A          436 IAHELGYE  443 (516)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHhCcc
Confidence            99998764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.98  E-value=5e-32  Score=249.10  Aligned_cols=249  Identities=18%  Similarity=0.167  Sum_probs=189.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~~~~-  160 (399)
                      |+|+||||||+||++++++|++ |++|++++|+....      .+   +.+|++|++++.+++++  +|+|||+||... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            4799999999999999999994 89999999985321      23   88999999999999986  999999999432 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------------CCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------PEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------------~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                            .....++|+.++.+++++|++.++ +||++||..++..            +..+|+.+|..+|++++.  ++++
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~  147 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSL  147 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCE
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeE
Confidence                  334567899999999999999887 9999999876432            357899999999999987  8999


Q ss_pred             EEecCccccc--ccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHH
Q 015872          223 IIRLCGFMQG--LIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCE  300 (399)
Q Consensus       223 ilRp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~  300 (399)
                      ++||+.+||.  +...+...+..+..+...+ + ..++++++|+|++++.+++++.  +++||+++ +.+|+.|+++.+.
T Consensus       148 ~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s~~e~~~~~~  222 (273)
T 2ggs_A          148 IIRTSGIFRNKGFPIYVYKTLKEGKTVFAFK-G-YYSPISARKLASAILELLELRK--TGIIHVAG-ERISRFELALKIK  222 (273)
T ss_dssp             EEEECCCBSSSSHHHHHHHHHHTTCCEEEES-C-EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEEHHHHHHHHH
T ss_pred             EEeccccccccHHHHHHHHHHHcCCCEEeec-C-CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-CcccHHHHHHHHH
Confidence            9999999961  1111212223333322222 2 5699999999999999998764  45999999 8999999999999


Q ss_pred             HHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHH
Q 015872          301 RLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYL  374 (399)
Q Consensus       301 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l  374 (399)
                      +.+|.+.++...+ +..          .+..            .....+..|+++++++|||+|+. .+++|++
T Consensus       223 ~~~g~~~~~~~~~-~~~----------~~~~------------~~~~~~~~d~~k~~~~lG~~p~~-~~l~~~~  272 (273)
T 2ggs_A          223 EKFNLPGEVKEVD-EVR----------GWIA------------KRPYDSSLDSSRARKILSTDFYT-LDLDGMV  272 (273)
T ss_dssp             HHTTCCSCEEEES-SCT----------TCCS------------CCCSBCCBCCHHHHHHCSSCCCS-CCGGGCC
T ss_pred             HHhCCChhhcccc-ccc----------cccc------------CCCcccccCHHHHHHHhCCCCCC-ccccccc
Confidence            9999887654321 100          0000            01223457889999999999932 5777754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=3.4e-31  Score=240.46  Aligned_cols=218  Identities=22%  Similarity=0.328  Sum_probs=174.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +++|+|+||||+|+||++++++|+++  |++|++++|+..+.. .+ ..+++++.+|++|++++.++++++|+|||+|+.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-GGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            34689999999999999999999999  899999999743322 12 346889999999999999999999999999984


Q ss_pred             CC-------------CC-------cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--CC-----CcHHHHHHHHH
Q 015872          159 RP-------------EE-------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--PE-----VPLMEIKYCTE  211 (399)
Q Consensus       159 ~~-------------~~-------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--~~-----~~y~~~K~~~E  211 (399)
                      ..             ..       ...++|+.++.++++++++.++++||++||.++...  +.     ..|..+|..+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  159 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAE  159 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHH
Confidence            32             11       234789999999999999999999999999876432  22     24667999999


Q ss_pred             HHHHhCCCCEEEEecCcccccccccchhhhccc--cccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC-
Q 015872          212 QFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEE--KSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR-  288 (399)
Q Consensus       212 ~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~-  288 (399)
                      .++++.|++++++||+.++++....  .....+  ..++.   . ...+++++|+|++++.+++++...|++||+++++ 
T Consensus       160 ~~~~~~~i~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~---~-~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~  233 (253)
T 1xq6_A          160 QYLADSGTPYTIIRAGGLLDKEGGV--RELLVGKDDELLQ---T-DTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE  233 (253)
T ss_dssp             HHHHTSSSCEEEEEECEEECSCSSS--SCEEEESTTGGGG---S-SCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCT
T ss_pred             HHHHhCCCceEEEecceeecCCcch--hhhhccCCcCCcC---C-CCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCc
Confidence            9999999999999999999764321  111111  12222   1 2369999999999999999876678899999864 


Q ss_pred             --CCCHHHHHHHHHHHhCCC
Q 015872          289 --AWTTQEVITLCERLAGQD  306 (399)
Q Consensus       289 --~~s~~e~~~~~~~~~g~~  306 (399)
                        .+|+.|+++.+.+.+|++
T Consensus       234 ~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          234 GTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             TTSCCCCCHHHHHHTCCCCC
T ss_pred             CCCCCHHHHHHHHHHHhCCC
Confidence              599999999999988863

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.8e-31  Score=261.71  Aligned_cols=243  Identities=17%  Similarity=0.173  Sum_probs=187.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC---CCcEEEEecCCCCCc------ccc--------------ccCCcEEEEccC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDE---GYDVRCLVRPRPAPA------DFL--------------RDWGATVVNADL  136 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~---g~~V~~~~r~~~~~~------~~l--------------~~~~v~~~~~Dl  136 (399)
                      ...+|+|||||||||||++|+++|+++   |++|++++|+.....      ..+              ...+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            445789999999999999999999999   999999999754321      011              124799999999


Q ss_pred             C------CCCcHHHHhcCCCEEEECCCCC---CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC--------
Q 015872          137 S------KPETIPATLVGVHTVIDCATGR---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP--------  199 (399)
Q Consensus       137 ~------d~~~l~~~~~~~d~Vi~~a~~~---~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~--------  199 (399)
                      +      |.+.+.++++++|+|||+|+..   +....+++|+.++.+++++|++.++++|||+||.+++...        
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~  229 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED  229 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence            8      4557888889999999999943   4456778999999999999999999999999997764321        


Q ss_pred             ----------------CCcHHHHHHHHHHHHHh----CCCCEEEEecCccccccc-------ccchhhhc----cccc--
Q 015872          200 ----------------EVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLI-------GQYAVPIL----EEKS--  246 (399)
Q Consensus       200 ----------------~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~-------~~~~~~~~----~~~~--  246 (399)
                                      .+.|+.+|..+|+++++    .|++++++||+++||...       ..++..++    ..+.  
T Consensus       230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P  309 (478)
T 4dqv_A          230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP  309 (478)
T ss_dssp             SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEE
T ss_pred             ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccc
Confidence                            03399999999999865    599999999999997421       11222222    1111  


Q ss_pred             --cccC---C--CCcceeceeHHHHHHHHHHHHhC----CccCCcEEEEcCCCC--CCHHHHHHHHHHHhCCCCCee-ec
Q 015872          247 --VWGT---D--ALTRIAYMDTQDIARLTFVALRN----EKINGRTLTFSGPRA--WTTQEVITLCERLAGQDANVT-MV  312 (399)
Q Consensus       247 --~~~~---~--~~~~~~~v~v~Dva~~i~~~l~~----~~~~g~~~~l~~~~~--~s~~e~~~~~~~~~g~~~~~~-~~  312 (399)
                        ++..   +  .+..++++|++|+|++++.++.+    +...+++||+++++.  +|+.|+++.+.+. |.+.+.+ .+
T Consensus       310 ~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~  388 (478)
T 4dqv_A          310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDF  388 (478)
T ss_dssp             SCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSH
T ss_pred             ccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCH
Confidence              1111   1  25677999999999999999986    445678999999988  9999999999995 8776655 56


Q ss_pred             CHHHHHHHHHH
Q 015872          313 PVSVLRFTRQL  323 (399)
Q Consensus       313 ~~~~~~~~~~~  323 (399)
                      +.+..++....
T Consensus       389 ~~w~~~l~~~~  399 (478)
T 4dqv_A          389 AEWLQRFEASL  399 (478)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            77776665543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=2e-31  Score=256.04  Aligned_cols=204  Identities=15%  Similarity=0.136  Sum_probs=173.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC---C
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG---R  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~---~  159 (399)
                      |+|||||||||||++|+++|+++|+ +|++++|+                    .|++++.++++++|+|||+|+.   .
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~~   60 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRPE   60 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCCC
Confidence            5899999999999999999999998 77776664                    6778899999999999999983   3


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCCCCCCCcHHHHHHHHHHHHHh----CCCCEEEEecCcccccc-
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGL-  233 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~-  233 (399)
                      .+..+.++|+.++.+++++|++.+++ +|||+||..++.  .++|+.+|..+|+++++    .|++++++||+++|+.. 
T Consensus        61 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           61 HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCC
Confidence            44566789999999999999999988 999999998876  78999999999999865    79999999999999753 


Q ss_pred             -------cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccC-CcEEEEcCCCCCCHHHHHHHHHHHhCC
Q 015872          234 -------IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKIN-GRTLTFSGPRAWTTQEVITLCERLAGQ  305 (399)
Q Consensus       234 -------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~-g~~~~l~~~~~~s~~e~~~~~~~~~g~  305 (399)
                             +..++..+..+..+...+++..++++|++|+|++++.+++++... +++||+++++.+|+.|+++.+.+.+|.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~  218 (369)
T 3st7_A          139 KPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS  218 (369)
T ss_dssp             CTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence                   223334445555554445677789999999999999999987654 789999999999999999999999987


Q ss_pred             CCCe
Q 015872          306 DANV  309 (399)
Q Consensus       306 ~~~~  309 (399)
                      +.++
T Consensus       219 ~~~~  222 (369)
T 3st7_A          219 RLDR  222 (369)
T ss_dssp             HHHT
T ss_pred             Cccc
Confidence            6433

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=2.6e-30  Score=227.36  Aligned_cols=197  Identities=20%  Similarity=0.188  Sum_probs=160.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      .|+|+||||||+||++++++|+++|++|++++|+..+.. .+...+++++++|++|++++.++++++|+|||+++.....
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-cccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence            478999999999999999999999999999999854432 2224579999999999999999999999999999955444


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------CCCcHHHHHHHHHHHHHhCCCCEEEEecCccccccccc
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQ  236 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~  236 (399)
                      ...++|+.++.++++++++.++++||++||.+++..      +..+|+.+|..+|+++++.+++++++||+.++++....
T Consensus        82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~  161 (206)
T 1hdo_A           82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG  161 (206)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS
T ss_pred             CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCc
Confidence            455789999999999999999999999999987654      33579999999999999999999999999985433221


Q ss_pred             chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC
Q 015872          237 YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR  288 (399)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~  288 (399)
                      .+...      +...+.  .++++++|+|++++.+++++...|++|++++++
T Consensus       162 ~~~~~------~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          162 AYTVT------LDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             CCEEE------SSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             ceEec------ccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            11110      111111  389999999999999999887778999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=2.2e-30  Score=230.42  Aligned_cols=201  Identities=13%  Similarity=0.110  Sum_probs=147.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |+||||||||+||++++++|+++|++|++++|+..+.. .+. .+++++++|++|+++  +++.++|+|||++|....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT-QTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH-HHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh-hcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            57999999999999999999999999999999854332 222 589999999999988  788999999999996332  


Q ss_pred             chhccHHHHHHHHHHHHHcCCcEEEEecccCCC--------------CCCCCcHHHHHHHHHHH--HH--hCCCCEEEEe
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQF--LQ--DSGLPHVIIR  225 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--------------~~~~~~y~~~K~~~E~~--l~--~~g~~~~ilR  225 (399)
                      ....|+.++.+++++|++.+++++|++||.+..              ..+...|+.+|...|.+  ++  +.|++++++|
T Consensus        75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivr  154 (221)
T 3ew7_A           75 EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS  154 (221)
T ss_dssp             TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEE
T ss_pred             ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence            356799999999999999999999999997642              12446688999999876  66  7899999999


Q ss_pred             cCcccccccccchhhh-ccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHH
Q 015872          226 LCGFMQGLIGQYAVPI-LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e  294 (399)
                      |+++|++..  ..... ..+..+...+ +. .++++++|+|++++.+++++...|++||++++...+.+|
T Consensus       155 p~~v~g~~~--~~~~~~~~~~~~~~~~-~~-~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          155 PSAMFEPGE--RTGDYQIGKDHLLFGS-DG-NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             CSSCCCCC-------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             CcceecCCC--ccCceEeccccceecC-CC-CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999997521  11111 1111121111 22 269999999999999999998889999999998776654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=1.1e-30  Score=248.34  Aligned_cols=220  Identities=15%  Similarity=0.208  Sum_probs=178.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CC-cEEEEecCCCCCcc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GY-DVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~-~V~~~~r~~~~~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      +++|+||||||||+||++++++|+++ |+ +|++++|+..+...   .+...+++++.+|++|.+++.++++++|+|||+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            45689999999999999999999999 97 99999997433211   122347899999999999999999999999999


Q ss_pred             CCCCC-------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHh-------CCCCE
Q 015872          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD-------SGLPH  221 (399)
Q Consensus       156 a~~~~-------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~-------~g~~~  221 (399)
                      |+...       +....++|+.|+.+++++|.+.++++||++||..+.. |.++|+.+|..+|++++.       .|+++
T Consensus        99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A           99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN-PINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS-CCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC-CccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence            98432       3456679999999999999999999999999987553 678999999999999864       47999


Q ss_pred             EEEecCcccccc---cccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHH
Q 015872          222 VIIRLCGFMQGL---IGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       222 ~ilRp~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                      +++||+++|+..   +..+...+..+. ++...+++..++|+|++|+|++++.+++++. .|++|++.++ .+|+.|+++
T Consensus       178 ~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~~~-~~s~~el~~  255 (344)
T 2gn4_A          178 SVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPKIP-SMKMTDLAK  255 (344)
T ss_dssp             EEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEECCC-EEEHHHHHH
T ss_pred             EEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecCCC-cEEHHHHHH
Confidence            999999999743   223333444444 3433344555689999999999999998764 5789999887 599999999


Q ss_pred             HHHHHh
Q 015872          298 LCERLA  303 (399)
Q Consensus       298 ~~~~~~  303 (399)
                      .+.+.+
T Consensus       256 ~i~~~~  261 (344)
T 2gn4_A          256 ALAPNT  261 (344)
T ss_dssp             HHCTTC
T ss_pred             HHHHhC
Confidence            998654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=7.6e-30  Score=227.62  Aligned_cols=202  Identities=14%  Similarity=0.043  Sum_probs=156.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |+||||||||+||++++++|+++|++|++++|+..+. ..+...+++++++|++|+++  ++++++|+|||+||......
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~   77 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-ADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSG   77 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-ccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcc
Confidence            5799999999999999999999999999999984432 23334589999999999988  78899999999999653334


Q ss_pred             chhccHHHHHHHHHHHHHcCCcEEEEecccCCCC-C---------------CCCcHHHHHHHHHHH--H-HhCCCCEEEE
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-H---------------PEVPLMEIKYCTEQF--L-QDSGLPHVII  224 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~-~---------------~~~~y~~~K~~~E~~--l-~~~g~~~~il  224 (399)
                      ....|+.++.+++++|++.+ ++||++||.+... .               +...|+.+|...|.+  + ++.+++++++
T Consensus        78 ~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~iv  156 (224)
T 3h2s_A           78 RGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGI  156 (224)
T ss_dssp             CTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            56789999999999999999 8999999875321 1               157899999999964  2 3679999999


Q ss_pred             ecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHH
Q 015872          225 RLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       225 Rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~  293 (399)
                      ||+++|++.....   ...+......+ +...++++++|+|++++.+++++...|++|++++.+..+..
T Consensus       157 rp~~v~g~~~~~~---~~~~~~~~~~~-~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~~  221 (224)
T 3h2s_A          157 SPSEAFPSGPATS---YVAGKDTLLVG-EDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHHH  221 (224)
T ss_dssp             EECSBCCCCCCCC---EEEESSBCCCC-TTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC-----
T ss_pred             cCccccCCCcccC---ceecccccccC-CCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhcc
Confidence            9999997521111   11111111112 33348999999999999999999888999999997765543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=7.8e-31  Score=232.47  Aligned_cols=199  Identities=21%  Similarity=0.172  Sum_probs=163.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+..+     ...+++++.+|++|++++.+++  +|+|||+++..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence            357899999999999999999999998  99999998654     2347888999999998888887  99999999843


Q ss_pred             -----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCcccccc
Q 015872          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLCGFMQGL  233 (399)
Q Consensus       160 -----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~-~~ilRp~~~~~~~  233 (399)
                           ....+.++|+.++.+++++|++.++++||++||.+++..+..+|+.+|..+|+++++.+++ ++++||+.+|++.
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~  156 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR  156 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCC
Confidence                 3345567899999999999999999999999999998888899999999999999999999 9999999999765


Q ss_pred             ccc-chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCH
Q 015872          234 IGQ-YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTT  292 (399)
Q Consensus       234 ~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~  292 (399)
                      ... +...+......+.   +..++++|++|+|++++.+++++.  +++||+++++.+++
T Consensus       157 ~~~~~~~~~~~~~~~~~---~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~~~  211 (215)
T 2a35_A          157 EEFRLAEILAAPIARIL---PGKYHGIEACDLARALWRLALEEG--KGVRFVESDELRKL  211 (215)
T ss_dssp             SCEEGGGGTTCCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHHHH
T ss_pred             CcchHHHHHHHhhhhcc---CCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHHHh
Confidence            332 2222221111111   125689999999999999999875  68999998765443

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=3.9e-30  Score=235.97  Aligned_cols=185  Identities=19%  Similarity=0.188  Sum_probs=153.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE-  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~-  161 (399)
                      +|+||||||||+||++++++|+++|++|++++|+..+..    ..+++++.+|++|++++.++++++|+|||+|+.... 
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   77 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVER   77 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            468999999999999999999999999999999855321    136789999999999999999999999999985433 


Q ss_pred             --CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC--------------CCCcHHHHHHHHHHHHH----hCCCCE
Q 015872          162 --EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--------------PEVPLMEIKYCTEQFLQ----DSGLPH  221 (399)
Q Consensus       162 --~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~--------------~~~~y~~~K~~~E~~l~----~~g~~~  221 (399)
                        ....++|+.++.++++++++.++++||++||..++..              +..+|+.+|..+|.+++    +.++++
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~  157 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIET  157 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCE
Confidence              3445789999999999999999999999999876432              34789999999999875    469999


Q ss_pred             EEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC
Q 015872          222 VIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP  287 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~  287 (399)
                      +++||+++|+...                .+....++++++|+|++++.+++++...+++|++.++
T Consensus       158 ~~lrp~~v~~~~~----------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~  207 (267)
T 3ay3_A          158 LNIRIGSCFPKPK----------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASA  207 (267)
T ss_dssp             EEEEECBCSSSCC----------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCS
T ss_pred             EEEeceeecCCCC----------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCC
Confidence            9999999984321                1123458999999999999999987654578887664

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=5e-29  Score=228.64  Aligned_cols=206  Identities=18%  Similarity=0.174  Sum_probs=169.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      |++|+||||||+|+||+++++.|+++|++|++++|+..+..    ..+++++.+|++|.+++.++++++|+|||+||...
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~   76 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV   76 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC
Confidence            34578999999999999999999999999999999865432    34789999999999999999999999999999543


Q ss_pred             C---CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CCCCcHHHHHHHHHHHHH----hCCC
Q 015872          161 E---EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFLQ----DSGL  219 (399)
Q Consensus       161 ~---~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------~~~~~y~~~K~~~E~~l~----~~g~  219 (399)
                      .   +...++|+.++.++++++++.++++||++||..++.              .+...|+.+|..+|.+++    +.|+
T Consensus        77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~  156 (267)
T 3rft_A           77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ  156 (267)
T ss_dssp             CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            3   345679999999999999999999999999976542              345789999999998874    6799


Q ss_pred             CEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHH
Q 015872          220 PHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLC  299 (399)
Q Consensus       220 ~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~  299 (399)
                      +++++||+.++++..                .+....+|++++|+++++..+++.+...+.++++.+++..++.++... 
T Consensus       157 ~~~~vr~~~v~~~~~----------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-  219 (267)
T 3rft_A          157 ETALVRIGSCTPEPN----------------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDNSHL-  219 (267)
T ss_dssp             CEEEEEECBCSSSCC----------------STTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCCGGG-
T ss_pred             eEEEEEeecccCCCC----------------CCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccChhH-
Confidence            999999999997521                123344899999999999999998876667888888877777665433 


Q ss_pred             HHHhCCCCC
Q 015872          300 ERLAGQDAN  308 (399)
Q Consensus       300 ~~~~g~~~~  308 (399)
                       +.+|...+
T Consensus       220 -~~~g~~p~  227 (267)
T 3rft_A          220 -GFLGWKPK  227 (267)
T ss_dssp             -GGGCCCCC
T ss_pred             -HHCCCCCC
Confidence             56676433

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=7.1e-28  Score=217.47  Aligned_cols=203  Identities=15%  Similarity=0.163  Sum_probs=159.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      |++|+|+||||+|+||++++++|+++|+  +|++++|+..+... +...+++++.+|++|++++.++++++|+|||+||.
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-cccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            4467999999999999999999999999  99999998654332 22346889999999999999999999999999994


Q ss_pred             CC----CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCcccccc
Q 015872          159 RP----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLCGFMQGL  233 (399)
Q Consensus       159 ~~----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~-~~ilRp~~~~~~~  233 (399)
                      ..    .+.+.++|+.++.++++++++.++++||++||.+++..+..+|+.+|..+|++++..+++ ++++||+.++++.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~  174 (242)
T 2bka_A           95 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR  174 (242)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred             ccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcCCCCeEEEcCceecCCC
Confidence            32    234567899999999999999999999999999988878889999999999999999995 9999999999764


Q ss_pred             cccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          234 IGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       234 ~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      ............  ...+.. .....+++++|+|++++.++.++.. ++.+.+.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          175 QESRPGEWLVRKFFGSLPDS-WASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             GGGSHHHHHHHHHHCSCCTT-GGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CCCcHHHHHHHHhhcccCcc-ccCCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            322111111000  000100 0112589999999999999998764 34666654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=1.7e-26  Score=205.72  Aligned_cols=190  Identities=14%  Similarity=0.128  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCCcEEEEecCCC-CCcccc--ccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRP-APADFL--RDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~-~~g~~V~~~~r~~~-~~~~~l--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+++|+||||+|+||+++++.|+ ++|++|++++|+.+ +. ..+  ...+++++++|++|++++.++++++|+|||++|
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            34679999999999999999999 89999999999854 32 223  345789999999999999999999999999998


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCC------------cHHHHHHHHHHHHHhCCCCEEEEe
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV------------PLMEIKYCTEQFLQDSGLPHVIIR  225 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~------------~y~~~K~~~E~~l~~~g~~~~ilR  225 (399)
                      ..        |+. ++++++++++.++++||++||.+++.....            +|..+|..+|+++++.+++++++|
T Consensus        83 ~~--------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vr  153 (221)
T 3r6d_A           83 ES--------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR  153 (221)
T ss_dssp             CC--------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred             CC--------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEe
Confidence            43        555 899999999999999999999987654322            799999999999999999999999


Q ss_pred             cCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHH--hCCc-cCCcEEEEcCCC
Q 015872          226 LCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVAL--RNEK-INGRTLTFSGPR  288 (399)
Q Consensus       226 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l--~~~~-~~g~~~~l~~~~  288 (399)
                      ||+++++.......       ....+......+++.+|+|++++.++  .++. ..++.+.+.++.
T Consensus       154 pg~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          154 LTWLYNDPEXTDYE-------LIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECEEECCTTCCCCE-------EECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             chhhcCCCCCccee-------eccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            99998762211111       01111111124899999999999999  7755 567888888764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=1.6e-26  Score=207.97  Aligned_cols=194  Identities=14%  Similarity=0.155  Sum_probs=149.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .|++|+||||||+|+||+++++.|+++| ++|++++|+.++.. .+...+++++++|++|++++.++++++|+|||+++.
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~   98 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG   98 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-ccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence            4567899999999999999999999999 99999999855433 234458999999999999999999999999999984


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCC-----------cHHHHHHHHHHHHHhCCCCEEEEecC
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV-----------PLMEIKYCTEQFLQDSGLPHVIIRLC  227 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~-----------~y~~~K~~~E~~l~~~g~~~~ilRp~  227 (399)
                      ...       ...+.++++++++.++++||++||.+++.....           .+...+..+|+.+++.|+++++||||
T Consensus        99 ~~~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg  171 (236)
T 3qvo_A           99 EDL-------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPA  171 (236)
T ss_dssp             TTH-------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEEC
T ss_pred             Cch-------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            221       145779999999999999999999887543221           23456777888999999999999999


Q ss_pred             cccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEcCCCC
Q 015872          228 GFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFSGPRA  289 (399)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~~~~~  289 (399)
                      +++++....+.        ....+....-.+++++|+|++++.++.++. ..|++|++++++.
T Consensus       172 ~i~~~~~~~~~--------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          172 WLTDEDIIDYE--------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             EEECCSCCCCE--------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             cccCCCCcceE--------EeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            99876432210        111111111258999999999999999876 5689999999864

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=4.3e-26  Score=207.16  Aligned_cols=202  Identities=13%  Similarity=0.094  Sum_probs=153.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc----CCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~----~~d~Vi~~a~~~  159 (399)
                      |+||||||+|+||+++++.|+++|++|++++|+.++...        .+++|++|.+++.++++    ++|+|||+||..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            689999999999999999999999999999998544221        16789999988888886    899999999954


Q ss_pred             C----CCcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCCC----------------------------CCCcH
Q 015872          160 P----EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDKH----------------------------PEVPL  203 (399)
Q Consensus       160 ~----~~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~~----------------------------~~~~y  203 (399)
                      .    .....++|+.++.++++++.+.    +.++||++||..++..                            +...|
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  153 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAY  153 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHH
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhH
Confidence            3    2345678999999999988765    5689999999876532                            33569


Q ss_pred             HHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          204 MEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       204 ~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      +.+|...|.+++.       .|++++++||+.++++...........+.......+.. ..+++++|+|++++.++.++ 
T Consensus       154 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  232 (255)
T 2dkn_A          154 AGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL-GRGSEPREVAEAIAFLLGPQA  232 (255)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHh-cCCCCHHHHHHHHHHHhCCCc
Confidence            9999999987743       58999999999999876543322111111110000122 26899999999999999875 


Q ss_pred             -ccCCcEEEEcCCCCCCHHH
Q 015872          276 -KINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       276 -~~~g~~~~l~~~~~~s~~e  294 (399)
                       ...|++|++.++..++++|
T Consensus       233 ~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          233 SFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             TTCCSCEEEESTTHHHHHCT
T ss_pred             ccceeeEEEecCCeEeeeec
Confidence             3468999999987666543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.92  E-value=3.2e-25  Score=204.31  Aligned_cols=221  Identities=12%  Similarity=0.072  Sum_probs=165.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc-CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD-WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+......   .+.. .++.++.+|++|++++.++++       +
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999997432211   1111 168899999999998888775       7


Q ss_pred             CCEEEECCCCCCC-------------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCCC---CCCcHHHHHH
Q 015872          149 VHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDKH---PEVPLMEIKY  208 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~~---~~~~y~~~K~  208 (399)
                      +|+|||+||....             ....++|+.++.++++++...    +.++||++||......   +...|+.+|.
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~  172 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  172 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHH
Confidence            9999999984321             123468999999999888763    5679999999876543   3467999999


Q ss_pred             HHHHHHHh-------CCCCEEEEecCcccccccccchh---hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          209 CTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAV---PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       209 ~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      ..|.+.+.       .|++++++|||.++++.......   ....  .+....+.....+++++|+|++++.++.++.  
T Consensus       173 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  250 (278)
T 2bgk_A          173 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVE--ELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  250 (278)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHH--HHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHH--HhhhcccccccccCCHHHHHHHHHHHcCccccc
Confidence            99987643       58999999999998765433211   0000  0000001111258899999999999997642  


Q ss_pred             cCCcEEEEcCCCCCCHHHHHHHHHHH
Q 015872          277 INGRTLTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      ..|++|++.++..+++.|+++.+.++
T Consensus       251 ~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          251 VSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             CCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             CCCCEEEECCcccccCCccchhhhhh
Confidence            46899999999999999999988654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.91  E-value=2.4e-24  Score=198.88  Aligned_cols=221  Identities=19%  Similarity=0.151  Sum_probs=160.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+.++..+....  .+++++++|++|.+++.++++       ++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4568999999999999999999999999999999985543332222  368899999999998887775       7899


Q ss_pred             EEECCCCCC--------C---CcchhccHHH----HHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRP--------E---EPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~--------~---~~~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+||...        .   ...+++|+.+    ++.+++.+++.+..+||++||....  ..+..+|+.+|...|.+.
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLS  162 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHH
Confidence            999999321        1   1234689999    6666666677788899999998654  345678999999999876


Q ss_pred             H----h---CCCCEEEEecCcccccccccchh-----------hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          215 Q----D---SGLPHVIIRLCGFMQGLIGQYAV-----------PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       215 ~----~---~g~~~~ilRp~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +    +   .|+++++++||.+.++.......           ....... +....+.. .+.+++|+|++++.+++++.
T Consensus       163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~dva~a~~~~~~~~~  240 (281)
T 3m1a_A          163 EGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ-LVQGSDGS-QPGDPAKAAAAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH-HHHC------CBCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH-HHhhccCC-CCCCHHHHHHHHHHHHhCCC
Confidence            3    2   68999999999987655332110           0000001 11111222 68899999999999999876


Q ss_pred             cCCcEEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          277 INGRTLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                       .+..|+++++....+.+.+..+.+.++
T Consensus       241 -~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          241 -TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             -CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence             467999998776677777777766543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=6.2e-24  Score=195.84  Aligned_cols=221  Identities=15%  Similarity=0.090  Sum_probs=149.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cc---c--cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FL---R--DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l---~--~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+   .  ..++.++++|++|++++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999997433211   11   1  1247889999999998888876     


Q ss_pred             --CCCEEEECCCCCCC------------C---cchhccHHHHHHHHHHHHHc----CCcEEEEecccCC-CC--CCCCcH
Q 015872          148 --GVHTVIDCATGRPE------------E---PIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC-DK--HPEVPL  203 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~------------~---~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~-~~--~~~~~y  203 (399)
                        ++|+|||+||....            +   ...++|+.++.++++++...    + .+||++||... ..  .+...|
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY  162 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHH
Confidence              89999999983211            1   22468999998888887654    5 79999999876 32  334579


Q ss_pred             HHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccc------cccccCCCCcceeceeHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEE------KSVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       204 ~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      +.+|...+.+.+.       .|+++++++||.+.++............      ...+....... .+++++|+|++++.
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~dvA~~v~~  241 (278)
T 1spx_A          163 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG-VMGQPQDIAEVIAF  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS-SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCc-CCCCHHHHHHHHHH
Confidence            9999999987642       6899999999999876543211000000      00000000111 47899999999999


Q ss_pred             HHhCCc---cCCcEEEEcCCCCCCHHHHHHHHHHHh
Q 015872          271 ALRNEK---INGRTLTFSGPRAWTTQEVITLCERLA  303 (399)
Q Consensus       271 ~l~~~~---~~g~~~~l~~~~~~s~~e~~~~~~~~~  303 (399)
                      ++.++.   ..|++|++.|+..+++.|+++++.+++
T Consensus       242 l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          242 LADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            987643   458999999999999999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.90  E-value=9e-24  Score=192.02  Aligned_cols=210  Identities=14%  Similarity=0.122  Sum_probs=154.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++..|+|+||||+|+||++++++|+++|++|++++|+.+....   .+.  ..++.++.+|++|++++.++++       
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3556899999999999999999999999999999997433211   111  2357889999999998888875       


Q ss_pred             CCCEEEECCCCCCC----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      ++|+|||+||....          ....++|+.++.++++++.    +.+.++||++||.....  .+..+|+.+|...|
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  167 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence            89999999994322          1234689999988888774    55778999999987643  34568999999999


Q ss_pred             HHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+.       .|++++++|||.++++.......+..... .. .+... ..+++++|+|++++.++.++.  ..|++|
T Consensus       168 ~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~-~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (255)
T 1fmc_A          168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-ML-QHTPI-RRLGQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHH-HH-HTCSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHH-HH-hcCCc-ccCCCHHHHHHHHHHHhCCccccCCCcEE
Confidence            87642       48999999999998765432211110000 00 01111 147899999999999997643  358899


Q ss_pred             EEcCCCCCCH
Q 015872          283 TFSGPRAWTT  292 (399)
Q Consensus       283 ~l~~~~~~s~  292 (399)
                      ++.++..+|+
T Consensus       245 ~v~gg~~~s~  254 (255)
T 1fmc_A          245 TVSGGGVQEL  254 (255)
T ss_dssp             EESTTSCCCC
T ss_pred             EECCceeccC
Confidence            9999987764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.89  E-value=8.1e-23  Score=184.52  Aligned_cols=202  Identities=13%  Similarity=0.084  Sum_probs=151.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhc---CCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLV---GVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~  155 (399)
                      +++.|+|+||||+|+||++++++|+++|++|++++|+.++...... ..+++++.+|++|++++.++++   .+|+|||+
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            4567899999999999999999999999999999997543222111 1367888999999999998886   48999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh-
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~-  216 (399)
                      ||....           +...++|+.++.++++++...    + .++||++||.....  .+...|+.+|...|.+.+. 
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  163 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHH
Confidence            994322           123468999988888877654    5 57999999987653  3346799999999987742 


Q ss_pred             ------CCCCEEEEecCcccccccccch------hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          217 ------SGLPHVIIRLCGFMQGLIGQYA------VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       217 ------~g~~~~ilRp~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                            .|++++++||+.++++......      ..+..+       ... ..+++++|+|++++.++.++.  ..|+.+
T Consensus       164 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 1cyd_A          164 AMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER-------HPL-RKFAEVEDVVNSILFLLSDRSASTSGGGI  235 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH-------STT-SSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc-------CCc-cCCCCHHHHHHHHHHHhCchhhcccCCEE
Confidence                  5899999999999876533110      111111       111 278999999999999998653  358899


Q ss_pred             EEcCCCC
Q 015872          283 TFSGPRA  289 (399)
Q Consensus       283 ~l~~~~~  289 (399)
                      ++.++..
T Consensus       236 ~v~gG~~  242 (244)
T 1cyd_A          236 LVDAGYL  242 (244)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            9998753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.89  E-value=7e-22  Score=180.22  Aligned_cols=199  Identities=18%  Similarity=0.142  Sum_probs=152.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+..+..    ...+.++++|++|++++.++++       ++|+||
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            45688999999999999999999999999999999855432    2378899999999998887775       799999


Q ss_pred             ECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC----CCCCCcHHHHHHHHHHHH
Q 015872          154 DCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD----KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       154 ~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~----~~~~~~y~~~K~~~E~~l  214 (399)
                      |+||....           +...++|+.++.++++++    ++.+..++|++||....    ..+...|+.+|...+.+.
T Consensus       102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~  181 (260)
T 3un1_A          102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVT  181 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHH
Confidence            99994322           123358999999988887    56677899999997653    234567999999999876


Q ss_pred             H----h---CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCC
Q 015872          215 Q----D---SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP  287 (399)
Q Consensus       215 ~----~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~  287 (399)
                      +    +   .|+++.+++||.+.++............      ....+ .+.+++|+|++++.+.+.....|++|++.||
T Consensus       182 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~------~~p~~-r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          182 RSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAG------LHPVG-RMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             HHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHT------TSTTS-SCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhc------cCCCC-CCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence            4    2   4899999999999876543221111111      11112 5778999999999996656567999999998


Q ss_pred             CCC
Q 015872          288 RAW  290 (399)
Q Consensus       288 ~~~  290 (399)
                      ...
T Consensus       255 ~~~  257 (260)
T 3un1_A          255 QNA  257 (260)
T ss_dssp             GGG
T ss_pred             eec
Confidence            644

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.89  E-value=2.2e-23  Score=192.50  Aligned_cols=227  Identities=16%  Similarity=0.191  Sum_probs=165.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC-----CcEEEEccCCCCCcHHHHhc---
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~-----~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      .+++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+...     .+.++++|++|++++.++++   
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            35567899999999999999999999999999999997543221   12111     47889999999988877765   


Q ss_pred             ----CCCEEEECCCC-CCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCC--CCCCCCcHHH
Q 015872          148 ----GVHTVIDCATG-RPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC--DKHPEVPLME  205 (399)
Q Consensus       148 ----~~d~Vi~~a~~-~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~--~~~~~~~y~~  205 (399)
                          ++|+|||+||. ...           +..+++|+.++.++++++...    +-.+||++||...  ...+...|+.
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  166 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV  166 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH
Confidence                68999999994 221           123468999999988877654    3349999999764  3345578999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      +|...+.+.+       ..|+++..++||.+..+......... .....+......+ .+.+++|+|++++.++.++.  
T Consensus       167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~p~~-r~~~~~dva~~~~~l~s~~~~~  244 (281)
T 3svt_A          167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA-ELSSDYAMCTPLP-RQGEVEDVANMAMFLLSDAASF  244 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH-HHHHHHHHHCSSS-SCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHhCcccCC
Confidence            9999998764       35799999999999876543321100 0000000001111 46789999999999997643  


Q ss_pred             cCCcEEEEcCCCCCC-HHHHHHHHHHHhCCCC
Q 015872          277 INGRTLTFSGPRAWT-TQEVITLCERLAGQDA  307 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s-~~e~~~~~~~~~g~~~  307 (399)
                      ..|++|++.|+..++ ..++++.+.+.+|.+.
T Consensus       245 itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          245 VTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             CCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             CCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            368999999988776 7889999999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.89  E-value=1.4e-23  Score=195.69  Aligned_cols=223  Identities=13%  Similarity=0.098  Sum_probs=159.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +.   ..++.++++|++|.+++.++++      
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            46678999999999999999999999999999999975432211   11   2368899999999998877765      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH-----cCCcEEEEecccCC--CCCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA-----MGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~-----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~  208 (399)
                       .+|+|||+||....           ....++|+.++.++++++..     .+..+||++||...  ...+...|+.+|.
T Consensus       103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  182 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKA  182 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHH
Confidence             46999999994321           12346899999888887753     24569999999754  2345568999999


Q ss_pred             HHHHHHHh-------CCCCEEEEecCccccc-ccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          209 CTEQFLQD-------SGLPHVIIRLCGFMQG-LIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       209 ~~E~~l~~-------~g~~~~ilRp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ..|.+.+.       .|++++++|||.++++ ............. .+....... .+++++|+|++++.++.++.  ..
T Consensus       183 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~p~~-~~~~~~dva~~~~~l~~~~~~~~~  260 (302)
T 1w6u_A          183 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK-EMIGRIPCG-RLGTVEELANLAAFLCSDYASWIN  260 (302)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHH-HHHTTCTTS-SCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHH-HHHhcCCcC-CCCCHHHHHHHHHHHcCCcccccC
Confidence            99987632       6899999999999865 2222110000000 000111111 47899999999999997643  36


Q ss_pred             CcEEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          279 GRTLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                      |++|++.++..+++.++++.+.+..|
T Consensus       261 G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          261 GAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             SCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             CCEEEECCCeeeccCCccccchhhcc
Confidence            89999999988888888877766544

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.88  E-value=7.5e-23  Score=187.93  Aligned_cols=207  Identities=19%  Similarity=0.187  Sum_probs=152.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|......+    .+.  ..++.++++|++|++++.++++      
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999994222211    111  2357889999999998888776      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCC---CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD---KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~---~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           ....++|+.++.++++++...   + ++||++||....   ..+...|+.+|..
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  176 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKAA  176 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHHH
Confidence             79999999994322           224568999999999998775   4 699999998665   2345679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhc-------c-cc--ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPIL-------E-EK--SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~-------~-~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .|.+.+.       .|++++++|||.++++..........       . +.  ..+......+ .+++++|+|++++.++
T Consensus       177 ~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          177 VEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK-RIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS-SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCC-CccCHHHHHHHHHHHh
Confidence            9987743       48999999999998765432111100       0 00  0111111222 6899999999999999


Q ss_pred             hCCc--cCCcEEEEcCCC
Q 015872          273 RNEK--INGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~~--~~g~~~~l~~~~  288 (399)
                      .++.  ..|++|++.++.
T Consensus       256 ~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          256 QEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CcccccccCcEEEecCCc
Confidence            7643  368999999873

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.88  E-value=2.9e-22  Score=180.88  Aligned_cols=207  Identities=15%  Similarity=0.112  Sum_probs=151.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc---CCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~  155 (399)
                      .++.++|+||||+|+||.++++.|+++|++|++++|+.++....... .+++++++|++|++++.++++   ++|+|||+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            45568999999999999999999999999999999974432221111 267888999999999998886   58999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh-
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~-  216 (399)
                      ||....           ....++|+.++.++++++...    + ..+||++||.....  .+...|+.+|...|.+.+. 
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHH
Confidence            994322           123468999988888877653    5 67999999986543  3456799999999987642 


Q ss_pred             ------CCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          217 ------SGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       217 ------~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                            .|++++++|||.++++....... ....  ..+......+ .+++++|+|++++.++.++.  ..|++|++.++
T Consensus       164 a~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA--KTMLNRIPLG-KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHH--HHHHHTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhcccCeEEEEEEeccccccchhhhccChHHH--HHHHhhCCCC-CCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                  58999999999998765332110 0000  0011111112 68899999999999997642  36889999987


Q ss_pred             CC
Q 015872          288 RA  289 (399)
Q Consensus       288 ~~  289 (399)
                      ..
T Consensus       241 ~~  242 (244)
T 3d3w_A          241 FW  242 (244)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.88  E-value=2.4e-22  Score=183.60  Aligned_cols=212  Identities=17%  Similarity=0.163  Sum_probs=147.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc---------CCcEEEEccCCCCCcHHHHhc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD---------WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~---------~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .++.++|+||||+|+||.++++.|+++|++|++++|+.++....   +..         .++.++++|++|++++.++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            45568999999999999999999999999999999974432211   111         357899999999988887775


Q ss_pred             C-------C-CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----C-CcEEEEecccCC--CCCCCC
Q 015872          148 G-------V-HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEV  201 (399)
Q Consensus       148 ~-------~-d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~--~~~~~~  201 (399)
                      +       + |+|||+||....           +..+++|+.++.++++++...    + ..+||++||...  ...+..
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  163 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQT  163 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBH
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCCh
Confidence            4       4 999999994332           123468999999999887654    4 569999999753  234557


Q ss_pred             cHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+.       .|++++++|||.++++............  + ...... ..+++++|+|++++.++.+
T Consensus       164 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~dva~~~~~l~~~  239 (264)
T 2pd6_A          164 NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDK--I-TEMIPM-GHLGDPEDVADVVAFLASE  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------C--T-GGGCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHH--H-HHhCCC-CCCCCHHHHHHHHHHHcCC
Confidence            899999999877632       6899999999999876543221111100  0 000011 1478899999999999976


Q ss_pred             Cc--cCCcEEEEcCCCCCCHHHH
Q 015872          275 EK--INGRTLTFSGPRAWTTQEV  295 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~~~s~~e~  295 (399)
                      +.  ..|+.+++.++..++....
T Consensus       240 ~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          240 DSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             GGTTCCSCEEEESTTC-------
T ss_pred             cccCCCCCEEEECCCceeccccC
Confidence            43  4689999999876655443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=3e-22  Score=180.38  Aligned_cols=199  Identities=17%  Similarity=0.123  Sum_probs=150.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc------CCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~------~~d~Vi~~a  156 (399)
                      +|+|+||||+|+||.+++++|+++|++|++++|+..  .     ..+.++++|++|++++.++++      ++|+|||+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence            478999999999999999999999999999999754  1     246889999999999988886      789999999


Q ss_pred             CCCCC---------------CcchhccHHHHHHHHHHHHHcC----------CcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          157 TGRPE---------------EPIKKVDWEGKVALIQCAKAMG----------IQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       157 ~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~----------v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      |....               ....++|+.++.++++++....          ..+||++||....  ..+...|+.+|..
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (242)
T 1uay_A           75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  154 (242)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHH
Confidence            83221               1234689999999999887642          1289999998653  3456789999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEE
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTL  282 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~  282 (399)
                      .+.+.+.       .|++++++|||.++++....+......   .+.........+++++|+|++++.++.++...|++|
T Consensus       155 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~  231 (242)
T 1uay_A          155 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA---SLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVV  231 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH---HHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHH---HHHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCcEE
Confidence            9887632       489999999999987654432211110   000000110147899999999999998865678999


Q ss_pred             EEcCCCCCC
Q 015872          283 TFSGPRAWT  291 (399)
Q Consensus       283 ~l~~~~~~s  291 (399)
                      ++.++..++
T Consensus       232 ~v~gG~~~~  240 (242)
T 1uay_A          232 RLDGALRMA  240 (242)
T ss_dssp             EESTTCCCC
T ss_pred             EEcCCeecC
Confidence            999986543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=4.4e-22  Score=174.44  Aligned_cols=173  Identities=13%  Similarity=0.128  Sum_probs=136.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC---CCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG---VHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~d~Vi~~a~~~~  160 (399)
                      |+|+||||+|+||++++++|+ +|++|++++|+..            .+.+|++|++++.+++++   +|+|||+||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            589999999999999999999 9999999999743            468999999999888875   899999999432


Q ss_pred             CC-----------cchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh------CC
Q 015872          161 EE-----------PIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD------SG  218 (399)
Q Consensus       161 ~~-----------~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~------~g  218 (399)
                      ..           ...++|+.++.++++++.+.   + .+||++||.....  .+...|+.+|...|.+.+.      .|
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~~~g  149 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRG  149 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHccCC
Confidence            21           22368999999999999876   4 6999999976542  3446799999999998754      38


Q ss_pred             CCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEE
Q 015872          219 LPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF  284 (399)
Q Consensus       219 ~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l  284 (399)
                      ++++++||+.++++... +     .      .. .....+++++|+|++++.++.+ ...|++|++
T Consensus       150 i~v~~v~pg~v~~~~~~-~-----~------~~-~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~v  201 (202)
T 3d7l_A          150 IRINTVSPNVLEESWDK-L-----E------PF-FEGFLPVPAAKVARAFEKSVFG-AQTGESYQV  201 (202)
T ss_dssp             CEEEEEEECCBGGGHHH-H-----G------GG-STTCCCBCHHHHHHHHHHHHHS-CCCSCEEEE
T ss_pred             eEEEEEecCccCCchhh-h-----h------hh-ccccCCCCHHHHHHHHHHhhhc-cccCceEec
Confidence            99999999999876421 0     0      00 1123789999999999998854 346788887

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.88  E-value=3.1e-22  Score=181.05  Aligned_cols=205  Identities=15%  Similarity=0.122  Sum_probs=149.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc---cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR---DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~---~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +++.++|+||||+|+||.+++++|+++|++|++++|+.++...   .+.   ..++.++.+|++|++++.++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999999999997433221   111   2357889999999999888875      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCC--CCCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           ...+++|+.++.++++    .+++.+.++||++||...  ...+...|+.+|..
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  163 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAG  163 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHH
Confidence             79999999994322           1234689999966555    445567789999999743  23455789999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      .+.+.+       ..++++++++||.++++....+......   .+....... .+++++|+|++++.++.++  ...|+
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~  239 (248)
T 2pnf_A          164 LIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQ---KYKEQIPLG-RFGSPEEVANVVLFLCSELASYITGE  239 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH---HHHHTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHH---HHHhcCCCC-CccCHHHHHHHHHHHhCchhhcCCCc
Confidence            998764       2589999999999987654332111100   010111111 5789999999999999763  33589


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      +|++.++.
T Consensus       240 ~~~v~gg~  247 (248)
T 2pnf_A          240 VIHVNGGM  247 (248)
T ss_dssp             EEEESTTC
T ss_pred             EEEeCCCc
Confidence            99998863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.88  E-value=3.9e-22  Score=182.28  Aligned_cols=211  Identities=14%  Similarity=0.081  Sum_probs=152.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc---cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR---DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~---~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.   ..++.++++|++|++++.++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999997543221   111   2357889999999998887775      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           +...++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|..
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  163 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAA  163 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHH
Confidence             79999999994321           1234578888888777764    45678999999987643  345679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhcc-----cc---ccccCC-CCcceeceeHHHHHHHHHHHHh
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILE-----EK---SVWGTD-ALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~-----~~---~~~~~~-~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+.+.+.       .|+++++++||.++++...........     ..   ..+... ...+ .+++++|+|++++.++.
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~dvA~~~~~l~s  242 (263)
T 3ai3_A          164 LMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIK-RFASPEELANFFVFLCS  242 (263)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTC-SCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCC-CCcCHHHHHHHHHHHcC
Confidence            9987632       689999999999987654322110000     00   000000 0112 57899999999999997


Q ss_pred             CCc--cCCcEEEEcCCCCCC
Q 015872          274 NEK--INGRTLTFSGPRAWT  291 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~~~s  291 (399)
                      ++.  ..|++|++.++..+|
T Consensus       243 ~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          243 ERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             TTCTTCCSCEEEESTTCCCC
T ss_pred             ccccCCCCcEEEECCCcccc
Confidence            643  358999999987654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.88  E-value=3.4e-21  Score=174.66  Aligned_cols=204  Identities=12%  Similarity=0.080  Sum_probs=143.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.+.     ...++.++.+|++|++++.++++       ++|+|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4567899999999999999999999999999999997542     12248899999999998888775       79999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||....           +...++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|...+.+.+
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  158 (250)
T 2fwm_X           79 VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLAL  158 (250)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHH
Confidence            999994321           123468999998888887    455678999999987643  345679999999998764


Q ss_pred             h-------CCCCEEEEecCcccccccccchhh-hcccccccc------CCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          216 D-------SGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWG------TDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       216 ~-------~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .       .|+++++++||.++++........ ......+..      ...... .+.+.+|+|++++.++.++.  ..|
T Consensus       159 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~p~dvA~~v~~l~s~~~~~~tG  237 (250)
T 2fwm_X          159 SVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG-KIARPQEIANTILFLASDLASHITL  237 (250)
T ss_dssp             HHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCC-CCcCHHHHHHHHHHHhCccccCCCC
Confidence            2       589999999999987654321100 000000000      000111 47889999999999997643  468


Q ss_pred             cEEEEcCCCC
Q 015872          280 RTLTFSGPRA  289 (399)
Q Consensus       280 ~~~~l~~~~~  289 (399)
                      +++++.|+..
T Consensus       238 ~~i~vdGG~~  247 (250)
T 2fwm_X          238 QDIVVDGGST  247 (250)
T ss_dssp             CEEEESTTTT
T ss_pred             CEEEECCCcc
Confidence            9999998754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.88  E-value=9.5e-22  Score=179.21  Aligned_cols=206  Identities=14%  Similarity=0.133  Sum_probs=150.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.++++       
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3556899999999999999999999999999999997443211   111  2358899999999998887775       


Q ss_pred             CCCEEEECCCCCC-C-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCC--CcHHHHH
Q 015872          148 GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPE--VPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~--~~y~~~K  207 (399)
                      ++|+|||+||... .           ....++|+.++.++++++..    .+..+||++||.....  .+.  ..|+.+|
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHH
Confidence            7999999998432 1           12346899999998888764    4677999999976532  122  6799999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccc-cchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIG-QYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      ...|.+.+.       .|++++++|||.++++... ......... . +....... .+++++|+|++++.++.++  ..
T Consensus       170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~  246 (260)
T 3awd_A          170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYD-A-WIAGTPMG-RVGQPDEVASVVQFLASDAASLM  246 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHH-H-HHHTCTTS-SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHH-H-HHhcCCcC-CCCCHHHHHHHHHHHhCchhccC
Confidence            999987742       6899999999999876543 111000000 0 00111111 4789999999999999763  24


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|++|++.++.
T Consensus       247 ~G~~~~v~gg~  257 (260)
T 3awd_A          247 TGAIVNVDAGF  257 (260)
T ss_dssp             CSCEEEESTTT
T ss_pred             CCcEEEECCce
Confidence            68899999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.88  E-value=5.8e-22  Score=179.21  Aligned_cols=204  Identities=9%  Similarity=0.114  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEe-cCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~-r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+|+||++++++|+++|++|++++ |+......   .+.  ..++.++++|++|++++.++++       
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999999994 54322111   111  2357889999999998887775       


Q ss_pred             CCCEEEECCCCCC-----------CCcchhccHHHHHHHHHHHH----HcCCcEEEEecccCC-C-CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC-D-KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-----------~~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~-~-~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||...           .....++|+.++.++++++.    +.+.++||++||... . ..+..+|+.+|...
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  162 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL  162 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHH
Confidence            7999999998321           22345689999888777765    457789999999743 3 23456899999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      |.+.+.       .|+++++++||.+.++....+.....   ..+....... .+++++|+|++++.++.++.  ..|++
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~  238 (247)
T 2hq1_A          163 IGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVK---EMYLNNIPLK-RFGTPEEVANVVGFLASDDSNYITGQV  238 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH---HHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHH---HHHHhhCCCC-CCCCHHHHHHHHHHHcCcccccccCcE
Confidence            987643       48999999999988654332111100   0011111112 58899999999999987643  36889


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      |++.++.
T Consensus       239 ~~v~gG~  245 (247)
T 2hq1_A          239 INIDGGL  245 (247)
T ss_dssp             EEESTTC
T ss_pred             EEeCCCc
Confidence            9999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.2e-21  Score=175.56  Aligned_cols=209  Identities=18%  Similarity=0.186  Sum_probs=148.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+.+........  ..+.++++|++|++++.++++       ++|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            45568999999999999999999999999999999986554333222  257899999999998887775       799


Q ss_pred             EEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHc----------CCcEEEEecccCCC--CCCCCcH
Q 015872          151 TVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNCD--KHPEVPL  203 (399)
Q Consensus       151 ~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~----------~v~~~V~~Ss~~~~--~~~~~~y  203 (399)
                      ++||+||....               ....++|+.++.++++++...          +..+||++||....  ..+...|
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tpc_A           84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY  163 (257)
T ss_dssp             EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence            99999994321               112368999999999988754          34589999997642  3455789


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+|...+.+.+       ..|+++..++||.+..+...........   .+.......-.+.+.+|+|++++.++.+..
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~p~~~r~~~~~dva~~v~~l~s~~~  240 (257)
T 3tpc_A          164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQD---ALAASVPFPPRLGRAEEYAALVKHICENTM  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSSSSCSCBCHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHH---HHHhcCCCCCCCCCHHHHHHHHHHHcccCC
Confidence            999999997753       2689999999999987654332111111   111111110147889999999999998866


Q ss_pred             cCCcEEEEcCCCCCC
Q 015872          277 INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s  291 (399)
                      ..|+++++.||..++
T Consensus       241 itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          241 LNGEVIRLDGALRMA  255 (257)
T ss_dssp             CCSCEEEESTTCCC-
T ss_pred             cCCcEEEECCCccCC
Confidence            689999999986554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.87  E-value=1.4e-21  Score=178.18  Aligned_cols=206  Identities=19%  Similarity=0.131  Sum_probs=149.4

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+.+...++.++.+|++|++++.++++       ++|
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3456678999999999999999999999999999999986654444555578999999999988877764       689


Q ss_pred             EEEECCCCCCC----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       151 ~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l  214 (399)
                      +|||+||....          ....++|+.++.++++++..    .+..+||++||.....  .+...|+.+|...+.+.
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  181 (260)
T 3gem_A          102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLT  181 (260)
T ss_dssp             EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHH
T ss_pred             EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHH
Confidence            99999993221          12346899999888887753    4567999999976543  34567999999999876


Q ss_pred             Hh------CCCCEEEEecCccccccccc--chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          215 QD------SGLPHVIIRLCGFMQGLIGQ--YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       215 ~~------~g~~~~ilRp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      +.      .++++..++||.+.......  +.......       .... .+..++|+|++++.+++.....|+++++.|
T Consensus       182 ~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~-------~p~~-r~~~~edva~~v~~L~~~~~itG~~i~vdG  253 (260)
T 3gem_A          182 LSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAK-------SALG-IEPGAEVIYQSLRYLLDSTYVTGTTLTVNG  253 (260)
T ss_dssp             HHHHHHHTTTCEEEEEEECTTCC----------------------CCSC-CCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhc-------CCCC-CCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence            32      35999999999987543211  00111110       0111 356789999999999977667899999999


Q ss_pred             CCCCC
Q 015872          287 PRAWT  291 (399)
Q Consensus       287 ~~~~s  291 (399)
                      |..++
T Consensus       254 G~~~~  258 (260)
T 3gem_A          254 GRHVK  258 (260)
T ss_dssp             TTTTC
T ss_pred             CcccC
Confidence            87654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.87  E-value=5.1e-22  Score=181.72  Aligned_cols=208  Identities=15%  Similarity=0.114  Sum_probs=141.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHh-------
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATL-------  146 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~-------  146 (399)
                      ++++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +.  ..++.++.+|++|.+++.+++       
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            356678999999999999999999999999999999974432211   11  225788999999998887776       


Q ss_pred             -cCCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          147 -VGVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       147 -~~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                       .++|+|||+||....           ....++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  169 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  169 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHH
Confidence             578999999984221           123468999999998888    55677899999998654  234578999999


Q ss_pred             HHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+.       .|++++++|||.++++............ .+. ...... .+++++|+|++++.++.++.  ..|
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G  246 (266)
T 1xq1_A          170 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK-VVI-SRKPLG-RFGEPEEVSSLVAFLCMPAASYITG  246 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHH-HHH-hcCCCC-CCcCHHHHHHHHHHHcCccccCccC
Confidence            99987742       5899999999999976543321110000 000 000111 47899999999999987542  368


Q ss_pred             cEEEEcCCCC
Q 015872          280 RTLTFSGPRA  289 (399)
Q Consensus       280 ~~~~l~~~~~  289 (399)
                      +++++.++..
T Consensus       247 ~~~~v~gG~~  256 (266)
T 1xq1_A          247 QTICVDGGLT  256 (266)
T ss_dssp             CEEECCCCEE
T ss_pred             cEEEEcCCcc
Confidence            9999999853

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=9.3e-22  Score=179.03  Aligned_cols=210  Identities=13%  Similarity=0.087  Sum_probs=151.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++ ....... . .++++|++|++++.++++       ++|+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3556899999999999999999999999999999998554 2211111 3 789999999988877764       6899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+||....           ....++|+.++.++++++..    .+..+||++||....  ..+...|+.+|...+.+.
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLT  160 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHH
Confidence            9999994322           12346899999998887753    467799999997653  234567999999999876


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhc-ccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPIL-EEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      +       ..|+++++++||.+..+.......... ...  ..+......+ .+++++|+|++++.++.++.  ..|++|
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dvA~~~~~l~s~~~~~~~G~~~  239 (256)
T 2d1y_A          161 RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR-RLGKPEEVAEAVLFLASEKASFITGAIL  239 (256)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCCCCCEE
Confidence            4       258999999999998665432210000 000  0111111122 58899999999999997643  468899


Q ss_pred             EEcCCCCCCH
Q 015872          283 TFSGPRAWTT  292 (399)
Q Consensus       283 ~l~~~~~~s~  292 (399)
                      ++.++..+++
T Consensus       240 ~v~gG~~~~~  249 (256)
T 2d1y_A          240 PVDGGMTASF  249 (256)
T ss_dssp             EESTTGGGBC
T ss_pred             EECCCccccc
Confidence            9999865543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1.7e-21  Score=177.96  Aligned_cols=209  Identities=12%  Similarity=0.053  Sum_probs=150.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++.......  .++.++++|++|++++.++++       ++|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            35568999999999999999999999999999999975432221111  167889999999998888776       799


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||+||.....           ...++|+.++.++++++..    .+ ..+||++||.....  .+...|+.+|...+.
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFG  168 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHH
Confidence            999999943221           2345889998888887754    34 57999999976542  345689999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchh----hh----ccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAV----PI----LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      +.+.       .|+++++++||.++++.......    ..    ......+......+ .+++++|+|++++.++.++. 
T Consensus       169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~dvA~~v~~l~s~~~~  247 (263)
T 3ak4_A          169 WTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLG-RIEEPEDVADVVVFLASDAAR  247 (263)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTC-SCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCcccc
Confidence            7642       58999999999998765432210    00    00000011111112 48899999999999997642 


Q ss_pred             -cCCcEEEEcCCCC
Q 015872          277 -INGRTLTFSGPRA  289 (399)
Q Consensus       277 -~~g~~~~l~~~~~  289 (399)
                       ..|++|++.|+..
T Consensus       248 ~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          248 FMTGQGINVTGGVR  261 (263)
T ss_dssp             TCCSCEEEESSSSS
T ss_pred             CCCCCEEEECcCEe
Confidence             4689999998854

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.87  E-value=8.1e-22  Score=178.58  Aligned_cols=203  Identities=15%  Similarity=0.109  Sum_probs=146.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c-c--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L-R--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l-~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +|+|+||||+|+||.+++++|+++|++|++++|+.++....   + .  ..++.++++|++|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999974332211   1 1  1257889999999998888875       79


Q ss_pred             CEEEECCCCCCCC--------------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          150 HTVIDCATGRPEE--------------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       150 d~Vi~~a~~~~~~--------------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      |+|||+||.....              ...++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            9999999843221              12357888886655554    45577899999997654  2345689999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .+.+.+.       .|++++++|||.++++....... ..... .+. ...... .+.+.+|+|++++.++.++.  ..|
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G  238 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRD-QVL-ARIPQK-EIGTAAQVADAVMFLAGEDATYVNG  238 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHH-HHH-TTCTTC-SCBCHHHHHHHHHHHHSTTCTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHH-HHH-hcCCCC-CCcCHHHHHHHHHHHcCchhhcccC
Confidence            9987643       48999999999998765432111 00000 000 111111 47899999999999998653  358


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++++.++.
T Consensus       239 ~~~~v~gG~  247 (250)
T 2cfc_A          239 AALVMDGAY  247 (250)
T ss_dssp             CEEEESTTG
T ss_pred             CEEEECCce
Confidence            999998874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.87  E-value=2.2e-22  Score=183.60  Aligned_cols=210  Identities=17%  Similarity=0.138  Sum_probs=151.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++..+.+|++|.+++.++++       
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543221   111  1257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      ++|+|||+||....            +...++|+.++.++++++.    +.+.++||++||.....  .+...|+.+|..
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  170 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA  170 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence            79999999994321            1234689999988777764    55778999999987653  344579999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+.+.       .|+++++++||.+..++.......- .....+......+ .+.+++|+|++++.++.++.  ..|+
T Consensus       171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~dva~~v~~l~s~~~~~~tG~  248 (260)
T 2zat_A          171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDK-ARKEYMKESLRIR-RLGNPEDCAGIVSFLCSEDASYITGE  248 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSH-HHHHHHHHHHTCS-SCBCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccCh-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCcccCCccCC
Confidence            9987643       4899999999998866533211000 0000010000111 47899999999999987643  3689


Q ss_pred             EEEEcCCCCCC
Q 015872          281 TLTFSGPRAWT  291 (399)
Q Consensus       281 ~~~l~~~~~~s  291 (399)
                      ++++.||...|
T Consensus       249 ~~~vdgG~~~s  259 (260)
T 2zat_A          249 TVVVGGGTASR  259 (260)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEECCCcccc
Confidence            99999987665

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.87  E-value=1.4e-21  Score=178.16  Aligned_cols=210  Identities=16%  Similarity=0.083  Sum_probs=151.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHh--------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATL--------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~--------  146 (399)
                      +++.|+|+||||+|+||.+++++|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.+++        
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543221   111  124788999999998888777        


Q ss_pred             cCCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          147 VGVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      .++|+|||+||....           ....++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|..
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA  165 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHH
Confidence            469999999994321           123468999999988887    455678999999976542  345679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhh-cccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPI-LEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      .+.+.+.       .|+++++++||.+..+......... .... ..+......+ .+++++|+|++++.++.++.  ..
T Consensus       166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dvA~~v~~l~s~~~~~~t  244 (260)
T 2ae2_A          166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR-RMGEPKELAAMVAFLCFPAASYVT  244 (260)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC-SCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCccccCCC
Confidence            9987742       4899999999999876543211100 0000 0111111112 47899999999999987642  36


Q ss_pred             CcEEEEcCCCCC
Q 015872          279 GRTLTFSGPRAW  290 (399)
Q Consensus       279 g~~~~l~~~~~~  290 (399)
                      |+++++.|+...
T Consensus       245 G~~~~vdgG~~~  256 (260)
T 2ae2_A          245 GQIIYVDGGLMA  256 (260)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccc
Confidence            899999998644

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.87  E-value=3.1e-21  Score=175.96  Aligned_cols=201  Identities=16%  Similarity=0.154  Sum_probs=148.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++.......  ..+.++++|++|++++.++++       ++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35568999999999999999999999999999999975432221111  147889999999999888876       799


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHH----HHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +|||+||....           +...++|+.++.++    ++.+++.+..+||++||.....  .+...|+.+|...+.+
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (260)
T 1nff_A           84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  163 (260)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHH
Confidence            99999994321           12346888888554    4445566778999999987543  3345799999999987


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                      .+.       .|++++++|||.++++... + .    ...+.  ..... .+.+++|+|++++.++.++.  ..|++|++
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~----~~~~~--~~~~~-~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v  234 (260)
T 1nff_A          164 TKSTALELGPSGIRVNSIHPGLVKTPMTD-W-V----PEDIF--QTALG-RAAEPVEVSNLVVYLASDESSYSTGAEFVV  234 (260)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-S----CTTCS--CCSSS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHhCccCcEEEEEEeCCCCCCccc-c-c----hhhHH--hCccC-CCCCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence            642       6899999999999876532 1 0    01111  10111 47889999999999997643  35899999


Q ss_pred             cCCCC
Q 015872          285 SGPRA  289 (399)
Q Consensus       285 ~~~~~  289 (399)
                      .++..
T Consensus       235 ~gG~~  239 (260)
T 1nff_A          235 DGGTV  239 (260)
T ss_dssp             STTGG
T ss_pred             CCCee
Confidence            99854

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.87  E-value=3.7e-21  Score=175.75  Aligned_cols=208  Identities=14%  Similarity=0.144  Sum_probs=152.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.++......  ..++.++++|++|++++.++++       ++|
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            4567899999999999999999999999999999998654332221  2368899999999998888876       899


Q ss_pred             EEEECCCCCCC-----------------CcchhccHHHHHHHHHHHHHc----------CCcEEEEecccCCC--CCCCC
Q 015872          151 TVIDCATGRPE-----------------EPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNCD--KHPEV  201 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------------~~~~~~n~~~~~~l~~aa~~~----------~v~~~V~~Ss~~~~--~~~~~  201 (399)
                      +|||+||....                 ...+++|+.++.++++++...          +..+||++||....  ..+..
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  168 (265)
T 2o23_A           89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  168 (265)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence            99999994321                 123458999999999988765          56799999998643  34556


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+       ..|+++++++||.+.++...........   .+.........+++.+|+|++++.++.+
T Consensus       169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~  245 (265)
T 2o23_A          169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN---FLASQVPFPSRLGDPAEYAHLVQAIIEN  245 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C---HHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHH---HHHHcCCCcCCCCCHHHHHHHHHHHhhc
Confidence            89999999987763       2589999999999886654321110000   0000001101478899999999999987


Q ss_pred             CccCCcEEEEcCCCCC
Q 015872          275 EKINGRTLTFSGPRAW  290 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~  290 (399)
                      +...|+++++.++..+
T Consensus       246 ~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          246 PFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             CccCceEEEECCCEec
Confidence            7678999999988543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.87  E-value=8.2e-23  Score=179.72  Aligned_cols=177  Identities=21%  Similarity=0.216  Sum_probs=136.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~~~~  160 (399)
                      |+|+||||+|+||++++++|+++  +|++++|+.++........+.+++.+|++|++++.++++   ++|+|||+||...
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   78 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG   78 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            57999999999999999999998  999999974332221111112888999999999999888   8999999998432


Q ss_pred             C-----------CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-------CCCC
Q 015872          161 E-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-------SGLP  220 (399)
Q Consensus       161 ~-----------~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~-------~g~~  220 (399)
                      .           ....++|+.++.++++++++.+.++||++||...+  ..+...|+.+|...|.+++.       .|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~  158 (207)
T 2yut_A           79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVH  158 (207)
T ss_dssp             CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCE
Confidence            1           12346899999999999977777899999998653  34557899999999987643       6999


Q ss_pred             EEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          221 HVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       221 ~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ++++||+.++++....             .+ .....+++++|+|++++.+++++.
T Consensus       159 v~~v~pg~v~t~~~~~-------------~~-~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          159 LVLVRLPAVATGLWAP-------------LG-GPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             EEEECCCCBCSGGGGG-------------GT-SCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             EEEEecCcccCCCccc-------------cC-CCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999998765211             01 112378999999999999998765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=2.9e-21  Score=176.38  Aligned_cols=208  Identities=18%  Similarity=0.138  Sum_probs=152.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc---CCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD---WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~---~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ..++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+..   .++.++++|++|++++.++++     
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35667899999999999999999999999999999997543221   1111   357899999999998887765     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----CCcEEEEecccCCC---CCCCCcHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD---KHPEVPLMEIK  207 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~---~~~~~~y~~~K  207 (399)
                        ++|+|||+||.....           ..+++|+.++.++++++...    +..+||++||....   ..+...|+.+|
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  165 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK  165 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHH
Confidence              799999999943221           12468999998888877654    67799999997653   23456799999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+.       .|+++..++||.+.+.............   +....... .+.+.+|+|++++.++.++.  ..
T Consensus       166 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~---~~~~~p~~-r~~~p~dva~~v~~L~s~~~~~it  241 (262)
T 3pk0_A          166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIAS---MARSIPAG-ALGTPEDIGHLAAFLATKEAGYIT  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHH---HHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHH---HHhcCCCC-CCcCHHHHHHHHHHHhCccccCCc
Confidence            999987642       6899999999999875433211111100   00000111 46788999999999987643  46


Q ss_pred             CcEEEEcCCCCC
Q 015872          279 GRTLTFSGPRAW  290 (399)
Q Consensus       279 g~~~~l~~~~~~  290 (399)
                      |+++++.||..+
T Consensus       242 G~~i~vdGG~~~  253 (262)
T 3pk0_A          242 GQAIAVDGGQVL  253 (262)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCEEEECCCeec
Confidence            899999998654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.87  E-value=8.6e-22  Score=179.57  Aligned_cols=211  Identities=14%  Similarity=0.098  Sum_probs=152.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.+...+...  ...+.++++|++|++++.++++       ++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3556899999999999999999999999999999997543222211  1357889999999998888776       799


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||+||.....           ..+++|+.++.++++++...    + -.+||++||.....  .+...|+.+|...+.
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVIS  164 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            999999943221           22358999999988887543    2 35899999986543  344679999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccch---hhh---cccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYA---VPI---LEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~---~~~---~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      +.+.       .|+++..++||.++++......   ...   ..+.  ..+......+ .+.+++|+|++++.++..+. 
T Consensus       165 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~dva~~v~~L~s~~~~  243 (259)
T 4e6p_A          165 LTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFG-RMGTAEDLTGMAIFLASAESD  243 (259)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS-SCBCTHHHHHHHHHTTSGGGT
T ss_pred             HHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCC-CCcCHHHHHHHHHHHhCCccC
Confidence            7642       5899999999999876543221   000   0000  1111111222 58899999999999886543 


Q ss_pred             -cCCcEEEEcCCCCCC
Q 015872          277 -INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 -~~g~~~~l~~~~~~s  291 (399)
                       ..|++|++.||..+|
T Consensus       244 ~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          244 YIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TCCSCEEEESTTSSCC
T ss_pred             CCCCCEEEECcChhcC
Confidence             358999999987554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=9.9e-23  Score=186.63  Aligned_cols=215  Identities=13%  Similarity=0.100  Sum_probs=151.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.    ..++.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            345789999999999999999999999999999997433211   111    2247889999999988887765      


Q ss_pred             -CCCEEEECCCCCCCCc---chhccHHHHHH----HHHHHHHcC---CcEEEEecccCCCC--CCCCcHHHHHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEEP---IKKVDWEGKVA----LIQCAKAMG---IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~---~~~~n~~~~~~----l~~aa~~~~---v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l  214 (399)
                       ++|+|||+||....+.   ..++|+.++..    +++.+++.+   ..+||++||.....  .+...|+.+|...+.+.
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFT  164 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHH
Confidence             5799999999544333   44678776544    555555543   57999999987643  34457999999998765


Q ss_pred             H---------hCCCCEEEEecCcccccccccchhhhccccc-ccc---CCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          215 Q---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKS-VWG---TDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       215 ~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +         ..|+++++++||.+.++...........+.. .+.   .....+..+++++|+|++++.++.++...|++
T Consensus       165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~  244 (267)
T 2gdz_A          165 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAI  244 (267)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCE
T ss_pred             HHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCCcE
Confidence            4         3689999999999986653322110000000 000   00011235789999999999999887678999


Q ss_pred             EEEcCCCCCCHHHH
Q 015872          282 LTFSGPRAWTTQEV  295 (399)
Q Consensus       282 ~~l~~~~~~s~~e~  295 (399)
                      +++.+++.+++.|+
T Consensus       245 ~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          245 MKITTSKGIHFQDY  258 (267)
T ss_dssp             EEEETTTEEEECCC
T ss_pred             EEecCCCcccccCc
Confidence            99999887776553

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.87  E-value=1.4e-21  Score=177.42  Aligned_cols=206  Identities=16%  Similarity=0.140  Sum_probs=147.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCc-EEEEccCCCCCcHHHHh------cCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGA-TVVNADLSKPETIPATL------VGV  149 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v-~~~~~Dl~d~~~l~~~~------~~~  149 (399)
                      ++++.++|+||||+|+||++++++|+++|++|++++|+.++......  ..++ .++++|++|++++.+++      .++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            34567899999999999999999999999999999997443221111  1235 78999999999888776      479


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCC--CcHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPE--VPLMEIKYCT  210 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~--~~y~~~K~~~  210 (399)
                      |+|||+||....           +...++|+.++.++++++    ++.+.++||++||.....  ...  ..|+.+|...
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  166 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV  166 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence            999999994322           123458888866655554    556778999999976532  222  6799999999


Q ss_pred             HHHHHh-------CCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          211 EQFLQD-------SGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       211 E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      |.+.+.       .|++++++|||.++++.......  ....  . +......+ .+++++|+|++++.++.++.  ..|
T Consensus       167 ~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~-~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G  242 (254)
T 2wsb_A          167 HQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFE--T-WLDMTPMG-RCGEPSEIAAAALFLASPAASYVTG  242 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHH--H-HHHTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHH--H-HHhcCCCC-CCCCHHHHHHHHHHHhCcccccccC
Confidence            987642       48999999999998765432110  0000  0 00000111 57899999999999997632  468


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++++.|+.
T Consensus       243 ~~~~v~gG~  251 (254)
T 2wsb_A          243 AILAVDGGY  251 (254)
T ss_dssp             CEEEESTTG
T ss_pred             CEEEECCCE
Confidence            999998874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.87  E-value=1.9e-21  Score=176.27  Aligned_cols=207  Identities=14%  Similarity=0.061  Sum_probs=148.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc-CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+.....   +.. .+++++.+|++|++++.++++       .
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35568999999999999999999999999999999974332211   111 368899999999988887775       4


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHH----HHHcCC-cEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~a----a~~~~v-~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      +|+|||+||....           ....++|+.++..+.++    +++.+. ++||++||....  ..+...|+.+|...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  162 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHH
Confidence            8999999984321           12346788876655444    455666 799999998654  23456899999999


Q ss_pred             HHHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          211 EQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       211 E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      +.+.+         ..|++++++|||.++++...........  ..+....... .+++++|+|++++.++.++.  ..|
T Consensus       163 ~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G  239 (251)
T 1zk4_A          163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA--MSQRTKTPMG-HIGEPNDIAYICVYLASNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHH--HTSTTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhh--HHHhhcCCCC-CCcCHHHHHHHHHHHcCcccccccC
Confidence            97763         4689999999999987654432111000  0011111111 47899999999999997643  368


Q ss_pred             cEEEEcCCCC
Q 015872          280 RTLTFSGPRA  289 (399)
Q Consensus       280 ~~~~l~~~~~  289 (399)
                      +++++.++..
T Consensus       240 ~~~~v~gG~~  249 (251)
T 1zk4_A          240 SEFVVDGGYT  249 (251)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECCCcc
Confidence            9999998753

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.87  E-value=4.9e-21  Score=175.71  Aligned_cols=206  Identities=16%  Similarity=0.121  Sum_probs=153.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+.++......  ..++.++.+|++|++++.++++       ++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4567899999999999999999999999999999998655332222  2368899999999998887775       799


Q ss_pred             EEEECCCCCCC-------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          151 TVIDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       151 ~Vi~~a~~~~~-------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|||+||....             +..+++|+.++.++++++    ++.+..+||++||....  ..+...|+.+|...+
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  167 (271)
T 3tzq_B           88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIE  167 (271)
T ss_dssp             EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence            99999995411             123468999999999888    66677899999998654  334568999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+.++........-..  ..+....... .+.+.+|+|++++.++.++.  ..|+++
T Consensus       168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i  244 (271)
T 3tzq_B          168 TLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIV--DIFATHHLAG-RIGEPHEIAELVCFLASDRAAFITGQVI  244 (271)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHH--HHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHhCcccCCcCCCEE
Confidence            8763       2689999999999987654311110000  0111111111 46788999999999997643  468999


Q ss_pred             EEcCCC
Q 015872          283 TFSGPR  288 (399)
Q Consensus       283 ~l~~~~  288 (399)
                      ++.||.
T Consensus       245 ~vdGG~  250 (271)
T 3tzq_B          245 AADSGL  250 (271)
T ss_dssp             EESTTT
T ss_pred             EECCCc
Confidence            999983

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=4.7e-21  Score=174.26  Aligned_cols=208  Identities=14%  Similarity=0.102  Sum_probs=148.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++. ...+..  .++.++.+|++|++++.++++       ++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568899999999999999999999999999999975411 111221  247888999999999888876       799


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHH----HHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +|||+||.....           ...++|+.++.++    +..+++.+..+||++||.....  .+...|+.+|...+.+
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGL  161 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHH
Confidence            999999943221           2345788766554    4445677778999999986543  3446799999999987


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchh--hhccc-c----ccc-cCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAV--PILEE-K----SVW-GTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~--~~~~~-~----~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      .+.       .|+++++++||.++++.......  ..... .    ..+ ......+ .+++++|+|++++.++.++.  
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~dvA~~~~~l~s~~~~~  240 (255)
T 2q2v_A          162 TKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSL-AFVTPEHLGELVLFLCSEAGSQ  240 (255)
T ss_dssp             HHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTC-CCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCC-CCcCHHHHHHHHHHHhCCccCC
Confidence            642       58999999999998765433210  00000 0    011 1111122 58899999999999987643  


Q ss_pred             cCCcEEEEcCCCC
Q 015872          277 INGRTLTFSGPRA  289 (399)
Q Consensus       277 ~~g~~~~l~~~~~  289 (399)
                      ..|++|++.++..
T Consensus       241 ~tG~~~~vdgG~~  253 (255)
T 2q2v_A          241 VRGAAWNVDGGWL  253 (255)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CCCCEEEECCCcc
Confidence            3589999998743

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.86  E-value=1.9e-21  Score=177.58  Aligned_cols=206  Identities=12%  Similarity=0.137  Sum_probs=150.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +++.|+|+||||+|+||.+++++|+++|++|++++|+..+....+.      ..++.++++|++|++++.++++      
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4556899999999999999999999999999999997554322111      2367889999999988877764      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCCCC---------CC
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDKHP---------EV  201 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~~~---------~~  201 (399)
                       .+|+|||+||.....           ...++|+.++.++++++...    + .++||++||.......         ..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence             489999999943221           12468999999988887543    3 3799999997653221         56


Q ss_pred             cHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+.       .|++++++|||.++++...........   .+......+ .+++++|+|++++.++.+
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~dva~~~~~l~~~  246 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD---HQASNIPLN-RFAQPEEMTGQAILLLSD  246 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH---HHHHTCTTS-SCBCGGGGHHHHHHHHSG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH---HHHhcCccc-CCCCHHHHHHHHHhhccC
Confidence            799999999987742       589999999999987654432111100   000000111 478899999999999976


Q ss_pred             Cc--cCCcEEEEcCCCC
Q 015872          275 EK--INGRTLTFSGPRA  289 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~~  289 (399)
                      +.  ..|++|++.++..
T Consensus       247 ~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          247 HATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             GGTTCCSCEEEECTTGG
T ss_pred             chhcCcCcEEEecCCEe
Confidence            43  4689999998853

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.86  E-value=7.6e-22  Score=179.53  Aligned_cols=204  Identities=13%  Similarity=0.128  Sum_probs=148.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC-CCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~-~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|++++|+ .++....   +.  ..++.++++|++|++++.++++       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456889999999999999999999999999999998 4432211   11  1257889999999999888876       


Q ss_pred             CCCEEEECCCC-CCCC-----------cchhccHHHHHHHHHHHHH----cC--C---cEEEEecccCCC---CCCCCcH
Q 015872          148 GVHTVIDCATG-RPEE-----------PIKKVDWEGKVALIQCAKA----MG--I---QKYVFYSIHNCD---KHPEVPL  203 (399)
Q Consensus       148 ~~d~Vi~~a~~-~~~~-----------~~~~~n~~~~~~l~~aa~~----~~--v---~~~V~~Ss~~~~---~~~~~~y  203 (399)
                      ++|+|||+||. ....           ...++|+.++.++++++..    .+  .   .+||++||....   ..+...|
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y  164 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY  164 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence            89999999985 3221           2346889999888776642    22  2   689999987542   3455689


Q ss_pred             HHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          204 MEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       204 ~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+|...|.+.+.       .|++++++|||.++++...........   .+......+ .+++++|+|++++.++.++.
T Consensus       165 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~dva~~~~~l~~~~~  240 (258)
T 3afn_B          165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD---RISNGIPMG-RFGTAEEMAPAFLFFASHLA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH---HHHTTCTTC-SCBCGGGTHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH---HHhccCCCC-cCCCHHHHHHHHHHHhCcch
Confidence            9999999987642       489999999999987654332111100   000111112 58899999999999997643


Q ss_pred             ---cCCcEEEEcCCC
Q 015872          277 ---INGRTLTFSGPR  288 (399)
Q Consensus       277 ---~~g~~~~l~~~~  288 (399)
                         ..|++|++.++.
T Consensus       241 ~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          241 SGYITGQVLDINGGQ  255 (258)
T ss_dssp             HTTCCSEEEEESTTS
T ss_pred             hccccCCEEeECCCc
Confidence               368999999875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.86  E-value=1.1e-21  Score=180.58  Aligned_cols=208  Identities=16%  Similarity=0.137  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.++++       
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3556899999999999999999999999999999997543221   121  2257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc------CCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~------~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                      ++|+|||+||....           ...+++|+.++.++++++...      +..+||++||....  ..+...|+.+|.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  178 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  178 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHH
Confidence            69999999994322           123468999999998887654      56799999998643  234567999999


Q ss_pred             HHHHHHHh-------CCCCEEEEecCcccccccccchhhhcc------cc--ccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          209 CTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILE------EK--SVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       209 ~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      ..+.+.+.       .|+++++++||.+.++...........      ..  ..+......+ .+++++|+|++++.++.
T Consensus       179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~dvA~~v~~l~s  257 (277)
T 2rhc_B          179 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG-RYVQPSEVAEMVAYLIG  257 (277)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTS-SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhC
Confidence            99987642       589999999999987654332110000      00  0011100112 47899999999999997


Q ss_pred             CCc--cCCcEEEEcCCC
Q 015872          274 NEK--INGRTLTFSGPR  288 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~  288 (399)
                      ++.  ..|+++++.|+.
T Consensus       258 ~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          258 PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             chhcCCCCcEEEECCCc
Confidence            643  468999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.86  E-value=2e-21  Score=175.75  Aligned_cols=203  Identities=16%  Similarity=0.175  Sum_probs=149.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.|+++||||+|+||.++++.|+++|++|++++|...+..+    .+..  .++.++++|++|++++.++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999886432221    1111  257889999999998887775       7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      +|+|||+||....           +...++|+.++.++++++    ++.+..+||++||...  ...+...|+.+|...+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            9999999994321           123468999999999988    5567779999999754  3345578999999998


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+..+...........   .+......+ .+.+.+|+|++++.++.++.  ..|++|
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~p~~-r~~~~~dva~~v~~l~s~~~~~itG~~i  238 (246)
T 3osu_A          163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKE---QMLTQIPLA-RFGQDTDIANTVAFLASDKAKYITGQTI  238 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHH---HHHTTCTTC-SCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHH---HHHhcCCCC-CCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            8763       3689999999999987654332211111   011111112 47788999999999987643  358999


Q ss_pred             EEcCCC
Q 015872          283 TFSGPR  288 (399)
Q Consensus       283 ~l~~~~  288 (399)
                      ++.||.
T Consensus       239 ~vdgG~  244 (246)
T 3osu_A          239 HVNGGM  244 (246)
T ss_dssp             EESTTS
T ss_pred             EeCCCc
Confidence            999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.86  E-value=4.6e-21  Score=174.81  Aligned_cols=208  Identities=12%  Similarity=0.082  Sum_probs=146.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +.    ..++.++.+|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            45568999999999999999999999999999999975332211   11    1267889999999999888876     


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                       ++|+|||+||.....           ...++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|..
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  163 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLP  163 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHH
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHH
Confidence             699999999943221           23458888886555544    466778999999987643  334679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchh------hhccc--cccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV------PILEE--KSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .+.+.+       ..|+++++++||.++++.......      .....  ...+....... .+.+++|+|++++.++.+
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~dva~~v~~l~s~  242 (260)
T 2z1n_A          164 VIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMG-RVGKPEELASVVAFLASE  242 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTS-SCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCC-CccCHHHHHHHHHHHhCc
Confidence            988763       258999999999998765431100      00000  00011100111 467999999999999976


Q ss_pred             C--ccCCcEEEEcCCC
Q 015872          275 E--KINGRTLTFSGPR  288 (399)
Q Consensus       275 ~--~~~g~~~~l~~~~  288 (399)
                      +  ...|+++++.|+.
T Consensus       243 ~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          243 KASFITGAVIPVDGGA  258 (260)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             cccCCCCCEEEeCCCc
Confidence            3  3468999998874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.86  E-value=7.4e-21  Score=175.43  Aligned_cols=208  Identities=16%  Similarity=0.169  Sum_probs=148.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc---cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR---DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~---~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.....+    .+.   ...+.++++|++|++++.++++     
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5667899999999999999999999999999999995332211    111   2357889999999998887775     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                        ++|+|||+||.....           ...++|+.++.++++++    ++.+..+||++||....  ......|+.+|.
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  181 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKH  181 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHH
Confidence              789999999943221           23468999999988887    45566799999997654  234467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccc------c---ccccCCCCcceeceeHHHHHHHHHHHH
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE------K---SVWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+.+.+       ..|+++..++||.+..+............      .   ..+......+ .+++++|+|++++.++
T Consensus       182 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~edvA~~v~~L~  260 (281)
T 3v2h_A          182 GIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK-KFITVEQVASLALYLA  260 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTC-SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCC-CccCHHHHHHHHHHHc
Confidence            9998763       25899999999999876543322111000      0   0122222222 6899999999999999


Q ss_pred             hCCc--cCCcEEEEcCCC
Q 015872          273 RNEK--INGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~~--~~g~~~~l~~~~  288 (399)
                      .++.  ..|+++++.||.
T Consensus       261 s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          261 GDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             SSGGGGCCSCEEEESTTG
T ss_pred             CCCcCCCCCcEEEECCCc
Confidence            7653  468999999874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.86  E-value=8.2e-21  Score=176.03  Aligned_cols=207  Identities=18%  Similarity=0.174  Sum_probs=152.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc---CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD---WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +..   ..+.++++|++|++++.++++      
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999985543221   221   357889999999988777654      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC---CCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~---~~~~~~y~~~K~  208 (399)
                       ++|+|||+||....           +...++|+.++.++++++    ++.+..+||++||....   ..+...|+.+|.
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa  197 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA  197 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence             68999999994322           123468999999988887    45667799999997653   344568999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g  279 (399)
                      ..+.+.+       ..|+++..++||.+++.............   +....... .+...+|+|++++.++.+.  ...|
T Consensus       198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~---~~~~~p~~-r~~~p~dvA~~v~fL~s~~a~~itG  273 (293)
T 3rih_A          198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISG---MARSIPMG-MLGSPVDIGHLAAFLATDEAGYITG  273 (293)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHH---HHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHH---HHhcCCCC-CCCCHHHHHHHHHHHhCccccCCCC
Confidence            9998764       26899999999999876543222111110   00000111 3567899999999998754  3468


Q ss_pred             cEEEEcCCCCC
Q 015872          280 RTLTFSGPRAW  290 (399)
Q Consensus       280 ~~~~l~~~~~~  290 (399)
                      +++++.||..+
T Consensus       274 ~~i~vdGG~~~  284 (293)
T 3rih_A          274 QAIVVDGGQVL  284 (293)
T ss_dssp             CEEEESTTTTC
T ss_pred             CEEEECCCccC
Confidence            99999998654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.86  E-value=3.5e-21  Score=176.35  Aligned_cols=211  Identities=13%  Similarity=0.116  Sum_probs=149.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +.    ..++.++++|++|++++.++++     
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999975432211   11    2357889999999998887775     


Q ss_pred             --CCCEEEECCCCCCC-C-----------cchhccHHHHHHH----HHHHHHcCCcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 --GVHTVIDCATGRPE-E-----------PIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~-~-----------~~~~~n~~~~~~l----~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                        ++|+|||+||.... .           ...++|+.++..+    +..+++.+..+||++||.....  .+...|+.+|
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  169 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  169 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence              68999999994322 1           1235788777654    4455566778999999986542  3456799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc-c----cccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-S----VWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      ...+.+.+       ..|+++++++||.+.++............. .    .+......+ .+.+.+|+|++++.++.++
T Consensus       170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~~~dvA~~v~~l~s~~  248 (267)
T 1iy8_A          170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK-RYGEAPEIAAVVAFLLSDD  248 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC-SCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCC-CCcCHHHHHHHHHHHcCcc
Confidence            99998764       368999999999998765432100000000 0    111111111 4789999999999998764


Q ss_pred             --ccCCcEEEEcCCCCCC
Q 015872          276 --KINGRTLTFSGPRAWT  291 (399)
Q Consensus       276 --~~~g~~~~l~~~~~~s  291 (399)
                        ...|+++++.|+..++
T Consensus       249 ~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          249 ASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             GTTCCSCEEEESTTTTTB
T ss_pred             ccCCCCCEEEECCCcccC
Confidence              2468999999986443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.86  E-value=9e-21  Score=172.28  Aligned_cols=205  Identities=14%  Similarity=0.099  Sum_probs=148.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++.......  .++.++.+|++|++++.++++       ++|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4568999999999999999999999999999999975432221111  247889999999998887775       7999


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHH----HHHHHHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKV----ALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~----~l~~aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+||....           +...++|+.++.    .+++.+++.+..+||++||....  ..+...|+.+|...+.+.
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  162 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS  162 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHH
Confidence            9999994322           123357888876    45556666677899999998654  234568999999999876


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceece-eHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYM-DTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                      +       ..|+++++++||.++++...........  . +....... .+. +.+|+|++++.++.++.  ..|+++++
T Consensus       163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~-~~~~~p~~-~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~v  238 (254)
T 1hdc_A          163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE--G-NYPNTPMG-RVGNEPGEIAGAVVKLLSDTSSYVTGAELAV  238 (254)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST--T-SCTTSTTS-SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHhhhcCeEEEEEecccCcCccccccchhHHH--H-HHhcCCCC-CCCCCHHHHHHHHHHHhCchhcCCCCCEEEE
Confidence            3       2589999999999987654321100000  0 11100111 366 89999999999997643  46899999


Q ss_pred             cCCCC
Q 015872          285 SGPRA  289 (399)
Q Consensus       285 ~~~~~  289 (399)
                      .|+..
T Consensus       239 dgG~~  243 (254)
T 1hdc_A          239 DGGWT  243 (254)
T ss_dssp             STTTT
T ss_pred             CCCcc
Confidence            98753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.86  E-value=6.4e-22  Score=179.70  Aligned_cols=208  Identities=15%  Similarity=0.065  Sum_probs=126.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +.++.|+|+||||+|+||.+++++|+++|++|++++|+.+.....   +.  ...+.++.+|++|++++.++++      
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            455678999999999999999999999999999999975432221   11  1247889999999998887775      


Q ss_pred             -CCCEEEECCCCC---C--------C---CcchhccHHHHHHHH----HHHHHcCCcEEEEecccCCCCCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGR---P--------E---EPIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~---~--------~---~~~~~~n~~~~~~l~----~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~  208 (399)
                       ++|+|||+||..   .        .   ...+++|+.++.++.    ..+++.+..+||++||.... .+...|+.+|.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~Y~asK~  163 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW-LYSNYYGLAKV  163 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------CCHH
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc-CCCchhHHHHH
Confidence             799999999842   1        1   123468999955544    44556667799999998876 45678999999


Q ss_pred             HHHHHHH----h---CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ----D---SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~----~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+    +   .|+++..++||.+.++............  .+...... ..+.+++|+|++++.++.++.  ..|
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~tG  240 (253)
T 3qiv_A          164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD--DIVKGLPL-SRMGTPDDLVGMCLFLLSDEASWITG  240 (253)
T ss_dssp             HHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------CCHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH--HHhccCCC-CCCCCHHHHHHHHHHHcCccccCCCC
Confidence            9998763    2   4799999999999865433221110000  00000011 146678999999999997643  368


Q ss_pred             cEEEEcCCCCC
Q 015872          280 RTLTFSGPRAW  290 (399)
Q Consensus       280 ~~~~l~~~~~~  290 (399)
                      ++|++.+|..+
T Consensus       241 ~~~~vdgG~~~  251 (253)
T 3qiv_A          241 QIFNVDGGQII  251 (253)
T ss_dssp             CEEEC------
T ss_pred             CEEEECCCeec
Confidence            99999998654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.86  E-value=6.6e-21  Score=174.64  Aligned_cols=205  Identities=15%  Similarity=0.144  Sum_probs=151.1

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc--cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~--~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+++.|+|+||||+|+||.++++.|+++|++|++++|......+.    +.  ...+.++++|++|++++.++++     
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999853332211    11  1257889999999998887765     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~  208 (399)
                        ++|+|||+||.....           ..+++|+.++.++++++    ++.+..+||++||...  .......|+.+|.
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKA  183 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHH
Confidence              789999999943221           23468999998888876    3446679999999754  2345568999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc---cC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK---IN  278 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~---~~  278 (399)
                      ..+.+.+       ..|+++..++||.+..+.............      .... .+.+.+|+|++++.++.++.   ..
T Consensus       184 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~------~p~~-r~~~~~dvA~~v~~l~s~~~~~~it  256 (269)
T 4dmm_A          184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEV------IPLG-RYGEAAEVAGVVRFLAADPAAAYIT  256 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGG------CTTS-SCBCHHHHHHHHHHHHHCGGGGGCC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhc------CCCC-CCCCHHHHHHHHHHHhCCcccCCCc
Confidence            9987753       368999999999998765443222111110      0111 47788999999999998742   35


Q ss_pred             CcEEEEcCCCCC
Q 015872          279 GRTLTFSGPRAW  290 (399)
Q Consensus       279 g~~~~l~~~~~~  290 (399)
                      |+++++.||..+
T Consensus       257 G~~i~vdGG~~~  268 (269)
T 4dmm_A          257 GQVINIDGGLVM  268 (269)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CCEEEECCCeec
Confidence            899999998654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.86  E-value=4.7e-21  Score=176.37  Aligned_cols=212  Identities=12%  Similarity=0.091  Sum_probs=152.3

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +.++.|+|+||||+|+||.++++.|+++|++|++++|+.+...+...  ...+.++++|++|++++.++++       ++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45667899999999999999999999999999999997543222211  2357889999999988877775       79


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||....           +..+++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...+.
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS  182 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence            999999994321           1223589999888887774    34556999999986543  345679999999998


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhcccccc---ccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV---WGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      +.+       ..|+++..++||.+..+...............   +......+ .+.+++|+|++++.++.++.  ..|+
T Consensus       183 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~pedvA~~v~~L~s~~~~~itG~  261 (277)
T 4dqx_A          183 LTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMD-RMGTAEEIAEAMLFLASDRSRFATGS  261 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTC-SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCccc-CCcCHHHHHHHHHHHhCCccCCCcCC
Confidence            763       25899999999999866532221110000000   11111122 47789999999999997643  4689


Q ss_pred             EEEEcCCCCCC
Q 015872          281 TLTFSGPRAWT  291 (399)
Q Consensus       281 ~~~l~~~~~~s  291 (399)
                      ++++.||..++
T Consensus       262 ~i~vdGG~~~~  272 (277)
T 4dqx_A          262 ILTVDGGSSIG  272 (277)
T ss_dssp             EEEESSSSSSC
T ss_pred             EEEECCchhhh
Confidence            99999986544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.86  E-value=5.5e-21  Score=177.24  Aligned_cols=205  Identities=18%  Similarity=0.080  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc---CCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV---GVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~  154 (399)
                      +++.|+|+||||+|+||.+++++|+++|++|++++|+..+.......  .+++++++|++|.+++.++++   ++|+|||
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~   92 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN   92 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            46678999999999999999999999999999999985443322222  257899999999999998887   5799999


Q ss_pred             CCCCC---------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC---------------CCCcHHHHHHHH
Q 015872          155 CATGR---------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH---------------PEVPLMEIKYCT  210 (399)
Q Consensus       155 ~a~~~---------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~---------------~~~~y~~~K~~~  210 (399)
                      +||..         ..+..+++|+.++.++++++.....++||++||......               +...|+.+|...
T Consensus        93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  172 (291)
T 3rd5_A           93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLAN  172 (291)
T ss_dssp             CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHH
T ss_pred             CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHH
Confidence            99932         223445799999999999999888889999999765321               224699999999


Q ss_pred             HHHHH-------hCC--CCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          211 EQFLQ-------DSG--LPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g--~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                      +.+.+       ..|  +++..++||.+..++...........  + .. .....-..+.+|+|++++.++.++...|+.
T Consensus       173 ~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~  248 (291)
T 3rd5_A          173 LLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDA--L-MS-AATRVVATDADFGARQTLYAASQDLPGDSF  248 (291)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------CHHHHHHHHHHHHHHHSCCCTTCE
T ss_pred             HHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHH--H-HH-HHHHHHhCCHHHHHHHHHHHHcCCCCCCce
Confidence            87763       245  99999999998766543321111100  0 00 011112345899999999999987667899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +++.++.
T Consensus       249 ~~vdgG~  255 (291)
T 3rd5_A          249 VGPRFGY  255 (291)
T ss_dssp             EEETTSS
T ss_pred             eCCcccc
Confidence            9987653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.86  E-value=1.1e-20  Score=171.22  Aligned_cols=204  Identities=14%  Similarity=0.131  Sum_probs=144.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC-CCCcccccc--CCcEEEEccCCCCCcHHHHh-------cCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRD--WGATVVNADLSKPETIPATL-------VGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~-~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~-------~~~  149 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+. ++....+..  .++.++++|++|++++.+++       .++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            35568999999999999999999999999999999985 322222222  25788999999998887775       479


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHH----HHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~a----a~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||.....           ...++|+.++.+++++    +++.+..+||++||.....  .+...|+.+|...+.
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (249)
T 2ew8_A           84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  163 (249)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence            9999999943221           1345888887776666    5566778999999986543  345679999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccc-cchhh--hccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIG-QYAVP--ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      +.+.       .|+++++++||.+.++... .....  -... .+.  . ... .+.+.+|+|++++.++.++  ...|+
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~--~-~~~-~~~~p~dva~~~~~l~s~~~~~~tG~  238 (249)
T 2ew8_A          164 FTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NML--Q-AIP-RLQVPLDLTGAAAFLASDDASFITGQ  238 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC-------------------CTT--S-SSC-SCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHH-Hhh--C-ccC-CCCCHHHHHHHHHHHcCcccCCCCCc
Confidence            7642       5899999999999876543 21100  0000 010  0 111 4788999999999999763  24689


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++++.|+.
T Consensus       239 ~~~vdGG~  246 (249)
T 2ew8_A          239 TLAVDGGM  246 (249)
T ss_dssp             EEEESSSC
T ss_pred             EEEECCCc
Confidence            99999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=9.6e-22  Score=182.81  Aligned_cols=221  Identities=12%  Similarity=0.101  Sum_probs=157.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--C---CcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--W---GATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~---~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+..  .   ++.++.+|++|++++.++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            3556899999999999999999999999999999997543221   1111  1   57889999999988887765    


Q ss_pred             ---CCCEEEECCCCCCCC-------------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC---CCCCcHH
Q 015872          148 ---GVHTVIDCATGRPEE-------------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK---HPEVPLM  204 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~~-------------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~---~~~~~y~  204 (399)
                         ++|+|||+||.....             ..+++|+.++.++++++..    .+ .+||++||.....   .+...|+
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHH
Confidence               799999999943221             1346888998888877754    34 6999999976543   3456799


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccch--hh----hccccccccCCCCcceeceeHHHHHHHHHHH
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VP----ILEEKSVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      .+|...+.+.+       ..|+++++++||.+.++......  ..    .......+....... .+.+.+|+|++++.+
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~l  260 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG-HCGKPEEIANIIVFL  260 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS-SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCC-CCcCHHHHHHHHHHH
Confidence            99999998763       36899999999999876543221  00    000000000000111 478899999999999


Q ss_pred             HhCC---ccCCcEEEEcCCCCCCHHHHHHHHHHH
Q 015872          272 LRNE---KINGRTLTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       272 l~~~---~~~g~~~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      +.++   ...|+++++.|+..+.+.+.+..+.++
T Consensus       261 ~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          261 ADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             hCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            8754   346899999998777766655555544

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=6.2e-21  Score=172.51  Aligned_cols=207  Identities=12%  Similarity=0.053  Sum_probs=148.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh---cCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~---~~~d~Vi~~a~  157 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++........++.++++|++|++++.+++   .++|+|||+||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            456899999999999999999999999999999997543222221126889999999998887664   47999999999


Q ss_pred             CCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--C-CCCcHHHHHHHHHHHHHh---
Q 015872          158 GRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--H-PEVPLMEIKYCTEQFLQD---  216 (399)
Q Consensus       158 ~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~-~~~~y~~~K~~~E~~l~~---  216 (399)
                      .....           ...++|+.++.++++++.    +.+..+||++||.....  . +...|+.+|...+.+.+.   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  163 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            43221           223588999888888765    44677999999986543  2 456799999999987643   


Q ss_pred             ----CCCCEEEEecCcccccccccchhhhc--cc-cccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          217 ----SGLPHVIIRLCGFMQGLIGQYAVPIL--EE-KSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       217 ----~g~~~~ilRp~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                          .|++++++|||.++++..........  .. ...+....... .+.+.+|+|++++.++.++.  ..|+++++.|+
T Consensus       164 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG-RFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS-SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence                48999999999998765432111000  00 00010000111 47899999999999997643  46899999887


Q ss_pred             C
Q 015872          288 R  288 (399)
Q Consensus       288 ~  288 (399)
                      .
T Consensus       243 ~  243 (246)
T 2ag5_A          243 W  243 (246)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.85  E-value=5.4e-21  Score=174.68  Aligned_cols=206  Identities=14%  Similarity=0.181  Sum_probs=150.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++|+|+||||+|+||.+++++|+++|++|++++|+.....+.+    .  ..++.++++|++|++++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4588999999999999999999999999999988754322211    1  1258899999999998888775       7


Q ss_pred             CCEEEECCC--CCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC-C---CCCCcHHHHH
Q 015872          149 VHTVIDCAT--GRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-K---HPEVPLMEIK  207 (399)
Q Consensus       149 ~d~Vi~~a~--~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~-~---~~~~~y~~~K  207 (399)
                      +|+|||+||  ....           ...+++|+.++.++++++    ++.+..+||++||.+.. .   .+...|+.+|
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asK  165 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAK  165 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHH
Confidence            999999999  2211           123468999999988887    66677899999987433 2   2346899999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+       ..|+++.+++||.+.++...........   .+....... .+.+.+|+|++++.++.++.  ..
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~p~~-r~~~~~dva~~v~~l~s~~~~~it  241 (264)
T 3i4f_A          166 VGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQ---LKEHNTPIG-RSGTGEDIARTISFLCEDDSDMIT  241 (264)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHH---C---------CCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHH---HHhhcCCCC-CCcCHHHHHHHHHHHcCcccCCCC
Confidence            99998763       2689999999999987765443322111   111111111 47789999999999998643  46


Q ss_pred             CcEEEEcCCCCCC
Q 015872          279 GRTLTFSGPRAWT  291 (399)
Q Consensus       279 g~~~~l~~~~~~s  291 (399)
                      |+++++.||....
T Consensus       242 G~~i~vdGG~~~~  254 (264)
T 3i4f_A          242 GTIIEVTGAVDVI  254 (264)
T ss_dssp             SCEEEESCSCCCC
T ss_pred             CcEEEEcCceeec
Confidence            8999999986543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.85  E-value=6.8e-21  Score=173.26  Aligned_cols=211  Identities=17%  Similarity=0.121  Sum_probs=153.7

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ..++.|+++||||+|+||.+++++|+++|++|++++|+.+....   .+.  ..++.++++|++|++++.++++      
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34567899999999999999999999999999999997543221   111  1357889999999988877765      


Q ss_pred             -CCCEEEECCCCCCC----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                       ++|+|||+||....          +..+++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV  167 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHH
Confidence             79999999994322          1234689999999888873    45567999999986543  3456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+........-..  ..+......+ .+.+++|+|++++.++.+..  ..|++
T Consensus       168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~p~~-r~~~~~dva~~~~~L~s~~~~~itG~~  244 (256)
T 3gaf_A          168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIE--RAMLKHTPLG-RLGEAQDIANAALFLCSPAAAWISGQV  244 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHH--HHHHTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHH--HHHHhcCCCC-CCCCHHHHHHHHHHHcCCcccCccCCE
Confidence            98764       2589999999999987654332111100  0011111112 47889999999999997643  46899


Q ss_pred             EEEcCCCCCCH
Q 015872          282 LTFSGPRAWTT  292 (399)
Q Consensus       282 ~~l~~~~~~s~  292 (399)
                      +++.||...++
T Consensus       245 i~vdgG~~~~~  255 (256)
T 3gaf_A          245 LTVSGGGVQEL  255 (256)
T ss_dssp             EEESTTSCCC-
T ss_pred             EEECCCccccC
Confidence            99999876654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.85  E-value=1.8e-21  Score=175.65  Aligned_cols=201  Identities=14%  Similarity=0.164  Sum_probs=143.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCcc---ccc--cCCcEE-EEccCCCCCcHHHHhc-------CC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPAD---FLR--DWGATV-VNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~---~l~--~~~v~~-~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      |+|+||||+|+||.+++++|+++|++|+++ +|+.++...   .+.  ..++.. +.+|++|.+++.++++       ++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999998 676332211   111  124566 8999999988877754       79


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHH----HHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~----~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||....           ....++|+.++    +.+++.+++.+.++||++||...  ...+...|+.+|...+.
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIG  161 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHH
Confidence            999999994322           12346788884    45555666678889999999753  23345689999999987


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+.       .|++++++|||.++++...........  .... .... ..+++++|+|++++.++.++.  ..|++|+
T Consensus       162 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~-~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          162 FTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKE--AYLK-QIPA-GRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHH-TCTT-CSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHH--HHHh-cCCC-CCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            7632       489999999999987654322111100  0000 0011 257899999999999997643  3589999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.++.
T Consensus       238 v~gg~  242 (245)
T 2ph3_A          238 VDGGL  242 (245)
T ss_dssp             ESTTC
T ss_pred             ECCCC
Confidence            99874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=170.47  Aligned_cols=205  Identities=14%  Similarity=0.137  Sum_probs=149.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|++++|+.++........++.++++|++|++++.++++       ++|+||
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4568999999999999999999999999999999975433222222358899999999988877765       589999


Q ss_pred             ECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCC-CCCCcHHHHHHHHHHHHH--
Q 015872          154 DCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK-HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       154 ~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~-~~~~~y~~~K~~~E~~l~--  215 (399)
                      |+||.....           ...++|+.++.++++++...    +..+||++||..... .....|+.+|...+.+.+  
T Consensus        83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~~l  162 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTL  162 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHHHHHHHHHHHHH
Confidence            999943221           23468999999888877643    567999999987333 234679999999987663  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                           ..|+++++++||.+..+....+.......  ..... ... .+.+.+|+|++++.++.++.  ..|+++.+.|+.
T Consensus       163 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~-p~~-~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          163 ALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK--AIAAT-PLG-RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH--HHHTC-TTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHH--HHhhC-CCC-CCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence                 36899999999998766543211111000  00000 111 37789999999999997643  468999999875


Q ss_pred             C
Q 015872          289 A  289 (399)
Q Consensus       289 ~  289 (399)
                      .
T Consensus       239 ~  239 (245)
T 1uls_A          239 T  239 (245)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.85  E-value=8.7e-22  Score=179.19  Aligned_cols=196  Identities=11%  Similarity=0.080  Sum_probs=138.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcC----CCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG----VHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~----~d~Vi~~a~~  158 (399)
                      ||+|+||||+|+||.++++.|+++|++|++++|+.++...       . +++|++|.+++.++++.    +|+|||+||.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            3689999999999999999999999999999998544221       1 67899999999888754    5999999995


Q ss_pred             CC----CCcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC----------------------------CC--CC
Q 015872          159 RP----EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD----------------------------KH--PE  200 (399)
Q Consensus       159 ~~----~~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~----------------------------~~--~~  200 (399)
                      ..    .+..+++|+.++.++++++.    +.+..+||++||....                            ..  +.
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            43    23456789999999888885    4456799999998765                            11  23


Q ss_pred             CcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccC-CCCcceeceeHHHHHHHHHHHH
Q 015872          201 VPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT-DALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       201 ~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..|+.+|...+.+.+       ..|+++++++||.+.++............. .... ..... .+++++|+|++++.++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~dvA~~~~~l~  230 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGE-SIAKFVPPMG-RRAEPSEMASVIAFLM  230 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTT-SCCCTHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHH-HHHhcccccC-CCCCHHHHHHHHHHHh
Confidence            569999999998763       368999999999988765433211100000 0000 00111 4788999999999999


Q ss_pred             hCC--ccCCcEEEEcCCC
Q 015872          273 RNE--KINGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~--~~~g~~~~l~~~~  288 (399)
                      .++  ...|+++++.|+.
T Consensus       231 ~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          231 SPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             SGGGTTCCSCEEEESTTH
T ss_pred             CchhcCCcCCEEEECCCc
Confidence            765  3468999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.85  E-value=8.8e-21  Score=175.34  Aligned_cols=205  Identities=15%  Similarity=0.156  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++.++.+|++|++++.++++       
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999998886433221   121  2357889999999998887763       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||....           ....++|+.++.++++++.    +.+.++||++||...  ...+...|+.+|...
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~  200 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  200 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHH
Confidence            68999999994322           1234688999777766664    557789999999754  234456899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++++++||.+.++............  . ....... .+++++|+|++++.++.++.  ..|++
T Consensus       201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~-~~~~~~~-~~~~~~dvA~~~~~l~~~~~~~~~G~~  276 (285)
T 2c07_A          201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKN--I-ISNIPAG-RMGTPEEVANLACFLSSDKSGYINGRV  276 (285)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHH--H-HTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHH--H-HhhCCCC-CCCCHHHHHHHHHHHhCCCcCCCCCCE
Confidence            87763       25899999999999876543321111100  0 0000111 47899999999999997643  36899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +++.|+.
T Consensus       277 i~v~gG~  283 (285)
T 2c07_A          277 FVIDGGL  283 (285)
T ss_dssp             EEESTTS
T ss_pred             EEeCCCc
Confidence            9998874

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.85  E-value=3.1e-21  Score=175.29  Aligned_cols=206  Identities=14%  Similarity=0.076  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCC-Cccccc----cCCcEEEEccCCCC-CcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPA-PADFLR----DWGATVVNADLSKP-ETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~-~~~~l~----~~~v~~~~~Dl~d~-~~l~~~~~-----  147 (399)
                      +++.|+|+||||+|+||.+++++|+++|++ |++++|+... ..+.+.    ..++.++.+|++|+ +++.++++     
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            355789999999999999999999999997 9999997532 111111    12578899999998 77776664     


Q ss_pred             --CCCEEEECCCCCCCC---cchhccHHHHHHHHHHHHHcC-------CcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE---PIKKVDWEGKVALIQCAKAMG-------IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~---~~~~~n~~~~~~l~~aa~~~~-------v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                        ++|+|||+||..+.+   ...++|+.++.++++++...-       ..+||++||.....  .....|+.+|...+.+
T Consensus        82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (254)
T 1sby_A           82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF  161 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHH
Confidence              799999999954433   345789999999999886432       35799999986543  3345799999999987


Q ss_pred             HHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          214 LQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       214 l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      .+.       .|+++++++||.+.++....... .......... .....++.+++|+|++++.+++.. ..|++|++.+
T Consensus       162 ~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~dvA~~i~~~~~~~-~~G~~~~v~g  238 (254)
T 1sby_A          162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WLDVEPRVAE-LLLSHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GGGSCTTHHH-HHTTSCCEEHHHHHHHHHHHHHHC-CTTCEEEEET
T ss_pred             HHHHHHHhccCCeEEEEEecCCccCccccccch-hhhhhHHHHH-HHhcCCCCCHHHHHHHHHHHHHcC-CCCCEEEEeC
Confidence            632       68999999999998765432110 0000000000 001124568999999999998743 4688999998


Q ss_pred             CC
Q 015872          287 PR  288 (399)
Q Consensus       287 ~~  288 (399)
                      +.
T Consensus       239 G~  240 (254)
T 1sby_A          239 GT  240 (254)
T ss_dssp             TE
T ss_pred             Cc
Confidence            73

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.85  E-value=1.5e-20  Score=171.20  Aligned_cols=211  Identities=13%  Similarity=0.091  Sum_probs=149.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+   .+..  .++.++++|++|++++.++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543221   1111  257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH-----HHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA-----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa-----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      ++|+|||+||....           +...++|+.++.++++++     ++.+..+||++||.....  .....|+.+|..
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG  162 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHH
Confidence            78999999993221           123468999999988887     333456999999976532  345679999999


Q ss_pred             HHHHHH--------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          210 TEQFLQ--------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       210 ~E~~l~--------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .+.+.+        ..|+++..++||.+..................+....... .+.+.+|+|++++.++.++.  ..|
T Consensus       163 ~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG  241 (257)
T 3imf_A          163 VLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLG-RLGTPEEIAGLAYYLCSDEAAYING  241 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTC-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHcCchhcCccC
Confidence            987652        3589999999999876532211100000000000000111 47789999999999997643  468


Q ss_pred             cEEEEcCCCCCC
Q 015872          280 RTLTFSGPRAWT  291 (399)
Q Consensus       280 ~~~~l~~~~~~s  291 (399)
                      +++++.||..++
T Consensus       242 ~~i~vdGG~~~~  253 (257)
T 3imf_A          242 TCMTMDGGQHLH  253 (257)
T ss_dssp             CEEEESTTTTSC
T ss_pred             CEEEECCCcccC
Confidence            999999987544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.85  E-value=7.1e-21  Score=173.54  Aligned_cols=206  Identities=13%  Similarity=0.046  Sum_probs=147.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec-CCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r-~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|++++| +.+....   .+.  ..++.++++|++|++++.++++       
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999 4322111   111  1247789999999988887775       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      ++|+|||+||.....           ...++|+.++.++++++..    .+ ..+||++||....  ..+...|+.+|..
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG  164 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHH
Confidence            799999999943221           2346888898887776654    34 5799999998654  3345689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KING  279 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g  279 (399)
                      .+.+.+       ..|++++++|||.++++....... ..... . +....... .+++++|+|++++.++.++  ...|
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G  241 (261)
T 1gee_A          165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRA-D-VESMIPMG-YIGEPEEIAAVAAWLASSEASYVTG  241 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHH-H-HHTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHH-H-HHhcCCCC-CCcCHHHHHHHHHHHhCccccCCCC
Confidence            987663       258999999999998765433210 00000 0 00000111 4789999999999999753  2468


Q ss_pred             cEEEEcCCCC
Q 015872          280 RTLTFSGPRA  289 (399)
Q Consensus       280 ~~~~l~~~~~  289 (399)
                      +++++.++..
T Consensus       242 ~~~~v~gg~~  251 (261)
T 1gee_A          242 ITLFADGGMT  251 (261)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEEcCCcc
Confidence            8999998754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.85  E-value=2.7e-20  Score=168.39  Aligned_cols=200  Identities=14%  Similarity=0.149  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++...      +..+++|++|++++.++++       ++|+|
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   85 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   85 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------hcCeeccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4567899999999999999999999999999999998544322      2248899999988877764       68999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||....           +...++|+.++.++++++.    +.+..+||++||....  ..+...|+.+|...+.+.+
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (247)
T 1uzm_A           86 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR  165 (247)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHH
Confidence            999994321           2234689999988888775    4567899999998653  2345689999999988764


Q ss_pred             h-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 D-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 ~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                      .       .|+++++++||.+..+....+.......   +....... .+.+.+|+|++++.++.++.  ..|+++++.|
T Consensus       166 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~p~~-~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg  241 (247)
T 1uzm_A          166 SIARELSKANVTANVVAPGYIDTDMTRALDERIQQG---ALQFIPAK-RVGTPAEVAGVVSFLASEDASYISGAVIPVDG  241 (247)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHH---HGGGCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHH---HHhcCCCC-CCcCHHHHHHHHHHHcCccccCCcCCEEEECC
Confidence            2       5899999999999866543221111000   00000111 47899999999999997632  4689999998


Q ss_pred             CCC
Q 015872          287 PRA  289 (399)
Q Consensus       287 ~~~  289 (399)
                      +..
T Consensus       242 G~~  244 (247)
T 1uzm_A          242 GMG  244 (247)
T ss_dssp             TTT
T ss_pred             Ccc
Confidence            854

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.85  E-value=1.7e-20  Score=171.46  Aligned_cols=202  Identities=19%  Similarity=0.203  Sum_probs=148.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++      ..++.++++|++|++++.++++       ++|+||
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            456889999999999999999999999999999997544      2368899999999998887775       699999


Q ss_pred             ECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh
Q 015872          154 DCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       154 ~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~  216 (399)
                      |+||.....           ...++|+.++.++++++..    .+..+||++||.....  .+...|+.+|...+.+.+.
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (264)
T 2dtx_A           80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKS  159 (264)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHH
Confidence            999943221           2346899998888887754    3567999999986543  3456799999999987642


Q ss_pred             ----CC--CCEEEEecCcccccccccchhhhc--cc----c--ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          217 ----SG--LPHVIIRLCGFMQGLIGQYAVPIL--EE----K--SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       217 ----~g--~~~~ilRp~~~~~~~~~~~~~~~~--~~----~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                          .+  +++++++||.+..++.........  ..    .  ..+......+ .+++++|+|++++.++.++.  ..|+
T Consensus       160 la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~p~dvA~~v~~l~s~~~~~~tG~  238 (264)
T 2dtx_A          160 IALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQ-RIGKPQEVASAVAFLASREASFITGT  238 (264)
T ss_dssp             HHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCCCCc
Confidence                22  899999999998665433210000  00    0  0011000112 47899999999999997643  4689


Q ss_pred             EEEEcCCCC
Q 015872          281 TLTFSGPRA  289 (399)
Q Consensus       281 ~~~l~~~~~  289 (399)
                      ++++.|+..
T Consensus       239 ~i~vdGG~~  247 (264)
T 2dtx_A          239 CLYVDGGLS  247 (264)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCcc
Confidence            999998753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.85  E-value=6.4e-21  Score=175.65  Aligned_cols=205  Identities=14%  Similarity=0.124  Sum_probs=149.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+|+||||+|+||.+++++|+++|++|++++|+.+.....   +.  ..++.++++|++|.+++.++++       
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46678999999999999999999999999999999985543211   11  2357889999999988887775       


Q ss_pred             CCCEEEECCCCCCC----C---------cchhccHHH----HHHHHHHHHHcCCcEEEEecccCCCCC----CCCcHHHH
Q 015872          148 GVHTVIDCATGRPE----E---------PIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCDKH----PEVPLMEI  206 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~----~---------~~~~~n~~~----~~~l~~aa~~~~v~~~V~~Ss~~~~~~----~~~~y~~~  206 (399)
                      .+|+|||+||....    .         ...++|+.+    ++++++.+++.+.++||++||......    +...|+.+
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA  190 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence            49999999983222    1         133578888    567788888878889999999876432    34579999


Q ss_pred             HHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          207 KYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       207 K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      |...|.+.+.       .+ ++++++||.+..+...........  .+.... ... .+++++|+|++++.++.++.  .
T Consensus       191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~-p~~-~~~~~~dvA~~~~~l~s~~~~~~  265 (279)
T 3ctm_A          191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKA--KWWQLT-PLG-REGLTQELVGGYLYLASNASTFT  265 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHH--HHHHHS-TTC-SCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHH--HHHHhC-Ccc-CCcCHHHHHHHHHHHhCccccCc
Confidence            9999988742       46 899999999886654211100000  000000 111 47889999999999997643  4


Q ss_pred             CCcEEEEcCCCC
Q 015872          278 NGRTLTFSGPRA  289 (399)
Q Consensus       278 ~g~~~~l~~~~~  289 (399)
                      .|+++++.|+..
T Consensus       266 tG~~i~vdgG~~  277 (279)
T 3ctm_A          266 TGSDVVIDGGYT  277 (279)
T ss_dssp             CSCEEEESTTCC
T ss_pred             cCCEEEECCCee
Confidence            689999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.85  E-value=4.8e-21  Score=172.82  Aligned_cols=201  Identities=14%  Similarity=0.141  Sum_probs=145.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      |+|+||||+|+||.+++++|+++|++|+++ .|+......   .+.  ..++.++++|++|++++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999995 675332211   111  1247789999999998888775       699


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      +|||+||....           +...++|+.++.++++++..    .+..+||++||...  ...+...|+.+|...+.+
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHH
Confidence            99999994322           12346899999888888765    36789999999753  234557899999999876


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc---cCCcEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK---INGRTLT  283 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~---~~g~~~~  283 (399)
                      .+       ..|++++++|||.++++....+......  .... ....+ .+++++|+|++++.++..+.   ..|++|+
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~-~~~~~-~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEK--KILG-TIPLG-RTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHH--HHHT-SCTTC-SCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHH--HHhh-cCCCC-CCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence            53       2689999999999987654332111111  0000 00111 47899999999999985432   3589999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.++.
T Consensus       238 v~gG~  242 (244)
T 1edo_A          238 IDGGI  242 (244)
T ss_dssp             ESTTT
T ss_pred             eCCCc
Confidence            99874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.85  E-value=3e-20  Score=167.22  Aligned_cols=199  Identities=19%  Similarity=0.230  Sum_probs=144.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~~  155 (399)
                      .|+|+||||+|+||.+++++|+++|++|++++|+.++..+.+   ++.++++|++| +++.++++       ++|+|||+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            478999999999999999999999999999999854422222   58889999999 88776653       79999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC----CCCCcHHHHHHHHHHHHH-
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK----HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~----~~~~~y~~~K~~~E~~l~-  215 (399)
                      ||....           +...++|+.++.++++++    ++.+.++||++||.....    .+...|+.+|...+.+.+ 
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  157 (239)
T 2ekp_A           78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA  157 (239)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHH
Confidence            984321           122357888888877776    455778999999986543    345679999999998763 


Q ss_pred             ------hCCCCEEEEecCcccccccccch-hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYA-VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                            ..|+++++++||.+.++...... .+-... .+ ....... .+.+.+|+|++++.++.++.  ..|+.+++.|
T Consensus       158 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~-~~~~p~~-~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  234 (239)
T 2ekp_A          158 LAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYE-PI-TARIPMG-RWARPEEIARVAAVLCGDEAEYLTGQAVAVDG  234 (239)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHH-HH-HTTCTTS-SCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHH-HH-HhcCCCC-CCcCHHHHHHHHHHHcCchhcCCCCCEEEECC
Confidence                  25899999999999876543211 000000 00 0000111 47889999999999987633  4689999998


Q ss_pred             CC
Q 015872          287 PR  288 (399)
Q Consensus       287 ~~  288 (399)
                      +.
T Consensus       235 G~  236 (239)
T 2ekp_A          235 GF  236 (239)
T ss_dssp             TT
T ss_pred             Cc
Confidence            74

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.85  E-value=1.5e-20  Score=170.59  Aligned_cols=201  Identities=15%  Similarity=0.138  Sum_probs=144.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .+++|+|+||||+|+||.++++.|+++|++|++++|+.++..      .+.++++|++|++++.++++       .+|+|
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            445688999999999999999999999999999999754322      37889999999988877764       47999


Q ss_pred             EECCCCCC-----------CCcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCCC--CCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDKH--PEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~-----------~~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~~--~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||...           .+...++|+.++.++++++..    .+..+||++||......  ....|+.+|...+.+.+
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFAR  171 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH
Confidence            99998321           122346899999888876643    46779999999875432  24579999999998764


Q ss_pred             h-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 D-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 ~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                      .       .|+++++++||.+..+....+.....   ..+....... .+++.+|+|++++.++.++.  ..|+++.+.|
T Consensus       172 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~p~~-~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          172 SLARELGSRNITFNVVAPGFVDTDMTKVLTDEQR---ANIVSQVPLG-RYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             HHHHHHCSSSEEEEEEEECSBCC---------CH---HHHHTTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHH---HHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence            2       68999999999887654332110000   0010100111 47899999999999997643  4689999998


Q ss_pred             CCCC
Q 015872          287 PRAW  290 (399)
Q Consensus       287 ~~~~  290 (399)
                      +..+
T Consensus       248 G~~~  251 (253)
T 2nm0_A          248 GLGM  251 (253)
T ss_dssp             TTTC
T ss_pred             cccc
Confidence            8543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.85  E-value=7.7e-21  Score=174.83  Aligned_cols=206  Identities=15%  Similarity=0.102  Sum_probs=147.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC-CcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW-GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~-~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+   .+... ++.++++|++|++++.++++       +
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4567899999999999999999999999999999997543221   11111 57888999999988877765       7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCC----cEEEEecccCCCC--CCCC-cHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGI----QKYVFYSIHNCDK--HPEV-PLMEI  206 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v----~~~V~~Ss~~~~~--~~~~-~y~~~  206 (399)
                      +|+|||+||....           +..+++|+.++.++++++.    +.+.    .+||++||.....  .... .|+.+
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~as  185 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPS  185 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHH
Confidence            9999999983221           1234689999977776654    4454    7999999986542  2344 89999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccccccc-CCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      |...+.+.+       ..|+++++++||.+..++..........  .+.. .....+ .+.+.+|+|++++.++.++.  
T Consensus       186 K~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~p~~-r~~~p~dvA~~v~~l~s~~~~~  262 (276)
T 2b4q_A          186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQA--LEADSASIPMG-RWGRPEEMAALAISLAGTAGAY  262 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHH--HHHHHHTSTTS-SCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHH--HHHhhcCCCCC-CcCCHHHHHHHHHHHhCccccC
Confidence            999998764       2589999999999987654332111000  0000 000111 47889999999999997643  


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+++++.|+.
T Consensus       263 ~tG~~i~vdGG~  274 (276)
T 2b4q_A          263 MTGNVIPIDGGF  274 (276)
T ss_dssp             CCSCEEEESTTT
T ss_pred             CCCCEEEeCCCc
Confidence            468999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=7.8e-21  Score=173.95  Aligned_cols=205  Identities=14%  Similarity=0.093  Sum_probs=148.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c-c--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L-R--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l-~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   + .  ...+.++++|++|++++.++++      
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999974432211   1 1  2357889999999988877765      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccC-CC--CCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHN-CD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~-~~--~~~~~~y~~~K~  208 (399)
                       ++|+|||+||.....           ...++|+.++.++++++.    +.+.++||++||.. ..  ..+...|+.+|.
T Consensus        98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~  177 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKG  177 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHH
Confidence             799999999943221           234589999988887764    44667999999977 32  234567999999


Q ss_pred             HHHHHHHh-------CCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          209 CTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       209 ~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ..+.+.+.       .|+++++++||.+..++.....  .....  . +....... .+++.+|+|++++.++.++.  .
T Consensus       178 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~-~~~~~p~~-~~~~p~dvA~~v~~l~s~~~~~i  253 (267)
T 1vl8_A          178 GVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLD--Y-MLKRIPLG-RTGVPEDLKGVAVFLASEEAKYV  253 (267)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHH--H-HHHTCTTS-SCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHH--H-HHhhCCCC-CCcCHHHHHHHHHHHcCccccCC
Confidence            99987642       5899999999998866543221  00000  0 00000111 47788999999999997642  4


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.||.
T Consensus       254 tG~~i~vdGG~  264 (267)
T 1vl8_A          254 TGQIIFVDGGW  264 (267)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCeEEECCCC
Confidence            68999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.85  E-value=1.3e-20  Score=170.45  Aligned_cols=204  Identities=15%  Similarity=0.132  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec-CCCCCc---cccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPA---DFLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r-~~~~~~---~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++| +.++..   +.+.  ..++.++++|++|++++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            34688999999999999999999999999999999 422211   1111  2257889999999998887775       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||.....           ...++|+.++.++.+++    ++.+..+||++||...  ...+...|+.+|...
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  161 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV  161 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHH
Confidence            799999999943221           23468888866655554    4567789999999754  233456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++++++||.+..++..........   .+....... .+++.+|+|++++.++.++.  ..|++
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~p~~-~~~~~~dvA~~~~~l~s~~~~~~tG~~  237 (246)
T 2uvd_A          162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKA---EMLKLIPAA-QFGEAQDIANAVTFFASDQSKYITGQT  237 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHH---HHHHTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHH---HHHhcCCCC-CCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            87753       3689999999999976654321110000   000000111 47899999999999997643  36899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +++.|+.
T Consensus       238 ~~vdgG~  244 (246)
T 2uvd_A          238 LNVDGGM  244 (246)
T ss_dssp             EEESTTS
T ss_pred             EEECcCc
Confidence            9999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.85  E-value=1.1e-20  Score=169.55  Aligned_cols=190  Identities=13%  Similarity=0.109  Sum_probs=131.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ++|+|+||||+|+||+++++.|+++|++|++++|+.++....... .++.++.+|++|.+++.++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            357899999999999999999999999999999974432221111 168899999999988877764       789999


Q ss_pred             ECCCCCCCC-----------cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-
Q 015872          154 DCATGRPEE-----------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       154 ~~a~~~~~~-----------~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-  215 (399)
                      |+||.....           ...++|+.++.+    +++.+++.+.++||++||.....  .+...|+.+|...+.+.+ 
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence            999943221           234578888864    44555666788999999987643  345689999999887653 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc--CCcEEEEcC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI--NGRTLTFSG  286 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~--~g~~~~l~~  286 (399)
                            ..|++++++|||.+..+.....     ..        .  +.+++.+|+|++++.++.++..  .|++....+
T Consensus       164 la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~--------~--~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          164 AMLDLREANVRVVNVLPGSVDTGFAGNT-----PG--------Q--AWKLKPEDVAQAVLFALEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHGGGTEEEEEEECC-------------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECCC-
T ss_pred             HHHHHhhcCcEEEEEEeCCCcCCccccc-----cc--------c--cCCCCHHHHHHHHHHHhCCCcccccceEEEeec
Confidence                  3689999999998876543211     00        0  1257899999999999987542  344443333

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.85  E-value=3.1e-20  Score=169.86  Aligned_cols=205  Identities=15%  Similarity=0.077  Sum_probs=148.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+......      ...+.+|++|.+++.++++       ++|+|
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------DLHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------SEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------hhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4567899999999999999999999999999999997554322      2445799999887766653       79999


Q ss_pred             EECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||.....           ..+++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|...+.+.+
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  178 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQ  178 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHH
Confidence            9999943321           22358999999998887    556677999999986543  344679999999998763


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccc-c---ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-K---SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                             ..|+++.+++||.+.++............ .   ..+......+ .+.+++|+|++++.++.++.  ..|+++
T Consensus       179 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG~~i  257 (266)
T 3uxy_A          179 CMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLG-RIAEPEDIADVVLFLASDAARYLCGSLV  257 (266)
T ss_dssp             HHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence                   25899999999999876543321110000 0   0111111112 57889999999999997643  468999


Q ss_pred             EEcCCCCCC
Q 015872          283 TFSGPRAWT  291 (399)
Q Consensus       283 ~l~~~~~~s  291 (399)
                      ++.||..++
T Consensus       258 ~vdGG~~~s  266 (266)
T 3uxy_A          258 EVNGGKAVA  266 (266)
T ss_dssp             EESTTCCCC
T ss_pred             EECcCEeCC
Confidence            999986543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.85  E-value=8.9e-21  Score=171.73  Aligned_cols=206  Identities=13%  Similarity=0.059  Sum_probs=146.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc---CCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV---GVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~  154 (399)
                      ....++|+||||+|+||.++++.|+++|++|++++|+.++......  ...+.++.+|++|.+++.++++   ++|+|||
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4456899999999999999999999999999999997543222111  1367889999999999888886   6899999


Q ss_pred             CCCCCC--------C---CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH--
Q 015872          155 CATGRP--------E---EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       155 ~a~~~~--------~---~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~--  215 (399)
                      +||...        .   +..+++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...+.+.+  
T Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  170 (249)
T 3f9i_A           91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSL  170 (249)
T ss_dssp             CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence            999321        1   2334689999988877764    44567999999986543  344679999999988763  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                           ..|+++.+++||.+..+...........   .+....... .+.+++|+|++++.++.++.  ..|+++++.||.
T Consensus       171 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          171 SYEVATRGITVNAVAPGFIKSDMTDKLNEKQRE---AIVQKIPLG-TYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             HHHHGGGTEEEEEEEECCBC------CCHHHHH---HHHHHCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHcCcEEEEEecCccccCcccccCHHHHH---HHHhcCCCC-CCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence                 3689999999999986654332111111   011111122 57889999999999998643  368999999875


Q ss_pred             C
Q 015872          289 A  289 (399)
Q Consensus       289 ~  289 (399)
                      .
T Consensus       247 ~  247 (249)
T 3f9i_A          247 L  247 (249)
T ss_dssp             S
T ss_pred             e
Confidence            3

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.85  E-value=1.7e-20  Score=169.61  Aligned_cols=207  Identities=13%  Similarity=0.126  Sum_probs=151.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+|+||||+|+||.+++++|+++|++|++++|+.++....   +.  ...+.++++|++|++++.++++       
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35578999999999999999999999999999999975432221   11  2357889999999988877764       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||.....           ...++|+.++.++++++..    .+..+||++||...  .......|+.+|...
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV  161 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHH
Confidence            589999999943221           2346889999888887643    45569999999754  234557899999998


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+..........   ..+......+ .+.+++|+|++++.++.++.  ..|++
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~-~~~~~~dva~~i~~l~s~~~~~~tG~~  237 (247)
T 3lyl_A          162 IGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQK---SFIATKIPSG-QIGEPKDIAAAVAFLASEEAKYITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHH---HHHHTTSTTC-CCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHH---HHHhhcCCCC-CCcCHHHHHHHHHHHhCCCcCCccCCE
Confidence            87763       368999999999998665433211111   1111111222 57899999999999997643  46899


Q ss_pred             EEEcCCCCC
Q 015872          282 LTFSGPRAW  290 (399)
Q Consensus       282 ~~l~~~~~~  290 (399)
                      +++.||..+
T Consensus       238 i~vdgG~~~  246 (247)
T 3lyl_A          238 LHVNGGMYM  246 (247)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCEec
Confidence            999998644

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=9.9e-21  Score=171.12  Aligned_cols=187  Identities=16%  Similarity=0.111  Sum_probs=137.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccc---cCCcEEEEccCCCCCcHHHHhc--------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLV--------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~---~~~v~~~~~Dl~d~~~l~~~~~--------  147 (399)
                      |++++|+||||+|+||.++++.|+++|  ++|++++|+..+.. .+.   ..++.++.+|++|++++.++++        
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-HHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            346889999999999999999999999  99999999754432 222   2368899999999998888776        


Q ss_pred             -CCCEEEECCCCCC-C-----------CcchhccHHHHHHHHHHHHHc----------C-----CcEEEEecccCCCC--
Q 015872          148 -GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAKAM----------G-----IQKYVFYSIHNCDK--  197 (399)
Q Consensus       148 -~~d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~~~----------~-----v~~~V~~Ss~~~~~--  197 (399)
                       ++|+|||+||... .           ...+++|+.++.++++++...          +     ..+||++||.....  
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999998433 1           123458899998888877543          4     67999999976532  


Q ss_pred             -------CCCCcHHHHHHHHHHHHH----h---CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHH
Q 015872          198 -------HPEVPLMEIKYCTEQFLQ----D---SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD  263 (399)
Q Consensus       198 -------~~~~~y~~~K~~~E~~l~----~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  263 (399)
                             .+...|+.+|...+.+.+    +   .|+++++++||.+..+....                   ..+++.+|
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~~~~  220 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALTVEQ  220 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HH
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------CCCCCHHH
Confidence                   345679999999998763    2   48999999999887554221                   14678899


Q ss_pred             HHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          264 IARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       264 va~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                      +|++++.++.++.  ..|+.+.+.++
T Consensus       221 ~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          221 STAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             HHHHHHHHHhcccccCCCeEEEECCc
Confidence            9999999998754  35677766554

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.85  E-value=2.6e-21  Score=182.05  Aligned_cols=222  Identities=14%  Similarity=0.107  Sum_probs=159.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC----------CCCc---ccccc--CCcEEEEccCCCCCcHHH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR----------PAPA---DFLRD--WGATVVNADLSKPETIPA  144 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~----------~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~  144 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.          ....   ..+..  ..+.++++|++|++++.+
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            45678999999999999999999999999999999862          1111   11111  246788999999998877


Q ss_pred             Hhc-------CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcCC----------cEEEEecccCCC
Q 015872          145 TLV-------GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMGI----------QKYVFYSIHNCD  196 (399)
Q Consensus       145 ~~~-------~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~v----------~~~V~~Ss~~~~  196 (399)
                      +++       ++|+|||+||.....           ..+++|+.++.++++++...-.          .+||++||....
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            775       799999999943221           2346899999998888754311          489999997542


Q ss_pred             --CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHH
Q 015872          197 --KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARL  267 (399)
Q Consensus       197 --~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  267 (399)
                        ......|+.+|..++.+.+       ..|+++..++|| +..+...........       .....+.+++++|+|++
T Consensus       184 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-------~~~~~~~~~~pedva~~  255 (322)
T 3qlj_A          184 QGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-------TQDQDFDAMAPENVSPL  255 (322)
T ss_dssp             HCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------CCTTCGGGTHHH
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-------ccccccCCCCHHHHHHH
Confidence              3345689999999998763       268999999998 654433222111110       11222356788999999


Q ss_pred             HHHHHhCCc--cCCcEEEEcCCCCC-----------------CHHHHHHHHHHHhCCCCCe
Q 015872          268 TFVALRNEK--INGRTLTFSGPRAW-----------------TTQEVITLCERLAGQDANV  309 (399)
Q Consensus       268 i~~~l~~~~--~~g~~~~l~~~~~~-----------------s~~e~~~~~~~~~g~~~~~  309 (399)
                      ++.++....  ..|+++++.||...                 ++.|+++.+.+.+|.+.++
T Consensus       256 v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~  316 (322)
T 3qlj_A          256 VVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP  316 (322)
T ss_dssp             HHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred             HHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence            999987643  36899999987643                 7899999999998865443

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.84  E-value=1.1e-20  Score=172.25  Aligned_cols=214  Identities=15%  Similarity=0.116  Sum_probs=143.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ++++.|+|+||||+|+||.+++++|+++|++|++++|+.++..+...  ...+.++.+|++|.+++.++++       ++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            45667899999999999999999999999999999998543322211  2358899999999988877775       78


Q ss_pred             CEEEECCCCCC-CC-----------cchhccHHHHHHHHHHHHHc----C----CcEEEEecccCCCC--CCCCcHHHHH
Q 015872          150 HTVIDCATGRP-EE-----------PIKKVDWEGKVALIQCAKAM----G----IQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       150 d~Vi~~a~~~~-~~-----------~~~~~n~~~~~~l~~aa~~~----~----v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                      |+|||+||... ..           ..+++|+.++.++++++...    +    ..+||++||.....  .....|+.+|
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK  164 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHH
Confidence            99999999432 11           12357899988877776433    1    34799999986543  2345699999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ...+.+.+       ..|+++..++||.+..+....+........ ..+......+ .+++++|+|++++.++..+.  .
T Consensus       165 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~i  243 (261)
T 3n74_A          165 GWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMG-RLLKPDDLAEAAAFLCSPQASMI  243 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTS-SCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcC-CCcCHHHHHHHHHHHcCCcccCc
Confidence            99998763       268999999999988665443321111100 1111111222 58899999999999996533  4


Q ss_pred             CCcEEEEcCCCCCCHH
Q 015872          278 NGRTLTFSGPRAWTTQ  293 (399)
Q Consensus       278 ~g~~~~l~~~~~~s~~  293 (399)
                      .|+++++.||..++..
T Consensus       244 tG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          244 TGVALDVDGGRSIGGR  259 (261)
T ss_dssp             CSCEEEESTTTTC---
T ss_pred             CCcEEEecCCcccCCC
Confidence            6899999998766543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.6e-20  Score=173.25  Aligned_cols=209  Identities=15%  Similarity=0.101  Sum_probs=148.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.++|+||||+|+||.++++.|+++|++|++++|+.+...+   .+..  ..+.++++|++|++++.++++       
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4456889999999999999999999999999999997543221   1222  257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC----CCCCcHHHHH
Q 015872          148 GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK----HPEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~----~~~~~y~~~K  207 (399)
                      ++|+|||+||....            +..+++|+.++.++++++    ++.+..+||++||.....    .+...|+.+|
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asK  184 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATK  184 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHH
Confidence            79999999994211            123468999999988887    556677999999986532    3456799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcc--c--cccccCCCCc-ceeceeHHHHHHHHHHHHhCC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE--E--KSVWGTDALT-RIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~-~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      ...+.+.+       ..|+++..++||.+..+...........  .  .......... .-.+...+|+|++++.++.+.
T Consensus       185 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~  264 (283)
T 3v8b_A          185 AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER  264 (283)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc
Confidence            99998764       2579999999999986554322110000  0  0000000000 014678899999999998764


Q ss_pred             c--cCCcEEEEcCCC
Q 015872          276 K--INGRTLTFSGPR  288 (399)
Q Consensus       276 ~--~~g~~~~l~~~~  288 (399)
                      .  ..|+++++.||.
T Consensus       265 a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          265 ARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             GTTCCSCEEEESTTH
T ss_pred             ccCCcCCEEEECcCc
Confidence            3  468999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.84  E-value=6.8e-20  Score=168.98  Aligned_cols=211  Identities=13%  Similarity=0.162  Sum_probs=151.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--------cc-------ccc--cCCcEEEEccCCCCCcH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--------AD-------FLR--DWGATVVNADLSKPETI  142 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--------~~-------~l~--~~~v~~~~~Dl~d~~~l  142 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+....        .+       .+.  ...+.++++|++|++++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            45678999999999999999999999999999999974321        00       111  13578899999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CC
Q 015872          143 PATLV-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KH  198 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~  198 (399)
                      .++++       ++|++||+||....           +..+++|+.++.++++++    ++.+..+||++||....  ..
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence            87775       79999999994321           123458999999988886    44566799999997654  33


Q ss_pred             CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccch-----hhhcccc------cc-ccCCCCcceece
Q 015872          199 PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA-----VPILEEK------SV-WGTDALTRIAYM  259 (399)
Q Consensus       199 ~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~-----~~~~~~~------~~-~~~~~~~~~~~v  259 (399)
                      +...|+.+|...+.+.+       ..|+++..++||.++++......     .+.....      .. ....... ..+.
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  245 (281)
T 3s55_A          167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-APFL  245 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-CSCB
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-cCCC
Confidence            45679999999998763       25899999999999876543210     0000000      00 0111111 3688


Q ss_pred             eHHHHHHHHHHHHhCCc--cCCcEEEEcCCCCCC
Q 015872          260 DTQDIARLTFVALRNEK--INGRTLTFSGPRAWT  291 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~~s  291 (399)
                      +++|+|++++.++.++.  ..|+++++.||...+
T Consensus       246 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            99999999999998643  358999999986543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=4.6e-20  Score=171.96  Aligned_cols=208  Identities=12%  Similarity=0.144  Sum_probs=149.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cc-------ccCCcEEEEccCCCCCcHHHHhc--
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FL-------RDWGATVVNADLSKPETIPATLV--  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l-------~~~~v~~~~~Dl~d~~~l~~~~~--  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++...   .+       ...++.++++|++|++++.++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999997432211   11       12368899999999998887775  


Q ss_pred             -----CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCCC-CCCcHHHH
Q 015872          148 -----GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDKH-PEVPLMEI  206 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~~-~~~~y~~~  206 (399)
                           ++|+|||+||....           ....++|+.++.++++++...    +..+||++||...... ....|+.+
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~Y~~s  174 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA  174 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcchhhHHH
Confidence                 59999999993221           123468999999999987652    3468999999873332 34579999


Q ss_pred             HHHHHHHHH----h---CCCCEEEEecCccccccc-ccch---hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          207 KYCTEQFLQ----D---SGLPHVIIRLCGFMQGLI-GQYA---VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       207 K~~~E~~l~----~---~g~~~~ilRp~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |...+.+.+    +   .|++++++|||.++++.. ..+.   .....  .+.... ... .+++++|+|++++.++.++
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~~-p~~-~~~~~~dvA~~i~~l~~~~  250 (303)
T 1yxm_A          175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE--GSFQKI-PAK-RIGVPEEVSSVVCFLLSPA  250 (303)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT--TGGGGS-TTS-SCBCTHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHH--HHHhcC-ccc-CCCCHHHHHHHHHHHhCcc
Confidence            999987663    2   489999999999987632 1111   01111  011100 111 4788999999999999764


Q ss_pred             c--cCCcEEEEcCCCCCC
Q 015872          276 K--INGRTLTFSGPRAWT  291 (399)
Q Consensus       276 ~--~~g~~~~l~~~~~~s  291 (399)
                      .  ..|+++++.++..++
T Consensus       251 ~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          251 ASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             cccCCCcEEEECCCeecc
Confidence            3  468999999986543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=1.1e-20  Score=173.35  Aligned_cols=217  Identities=13%  Similarity=0.132  Sum_probs=151.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+........ .++.++++|++|++++.++++       ++|+
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678999999999999999999999999999999974432221111 247889999999998887765       7899


Q ss_pred             EEECCCCCCC------------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l  214 (399)
                      |||+||....            +...++|+.++.++++++...   +..+||++||...  .......|+.+|...+.+.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  165 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMT  165 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHH
Confidence            9999984321            123468999999988888532   2469999999753  2334568999999999876


Q ss_pred             Hh-------CCCCEEEEecCcccccccccchhhhcccc-ccc--cCCCCcceeceeHHHHHHHHHHHHhCC-ccCCcEEE
Q 015872          215 QD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVW--GTDALTRIAYMDTQDIARLTFVALRNE-KINGRTLT  283 (399)
Q Consensus       215 ~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~v~v~Dva~~i~~~l~~~-~~~g~~~~  283 (399)
                      +.       .|+++++++||.++++............. ...  ....... .+...+|+|++++.++.+. ...|++++
T Consensus       166 ~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dva~~v~~L~s~~~~itG~~i~  244 (270)
T 1yde_A          166 KALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG-RMGQPAEVGAAAVFLASEANFCTGIELL  244 (270)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS-SCBCHHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCC-CCcCHHHHHHHHHHHcccCCCcCCCEEE
Confidence            42       68999999999998765432110000000 000  0000111 3678899999999988753 34689999


Q ss_pred             EcCCCCCCHHHHHH
Q 015872          284 FSGPRAWTTQEVIT  297 (399)
Q Consensus       284 l~~~~~~s~~e~~~  297 (399)
                      +.||..+.+.....
T Consensus       245 vdGG~~~~~~~~~~  258 (270)
T 1yde_A          245 VTGGAELGYGCKAS  258 (270)
T ss_dssp             ESTTTTSCC-----
T ss_pred             ECCCeecccCcCcc
Confidence            99987666544433

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.84  E-value=2.8e-20  Score=170.90  Aligned_cols=208  Identities=15%  Similarity=0.064  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHh--------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATL--------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~--------  146 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+   .+.  ..++.++++|++|++++.+++        
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543221   111  235788999999998887776        


Q ss_pred             cCCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          147 VGVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      .++|+|||+||.....           ...++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|..
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  177 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  177 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence            5799999999943211           123589999988888773    45667999999987643  345679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      .+.+.+.       .|+++++++||.++++.............    .+.... ... .+.+.+|+|++++.++..+.  
T Consensus       178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-p~~-r~~~p~dvA~~v~~l~s~~~~~  255 (273)
T 1ae1_A          178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMG-RAGKPQEVSALIAFLCFPAASY  255 (273)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS-TTC-SCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC-CCC-CCcCHHHHHHHHHHHhCccccC
Confidence            9987642       58999999999998765432211000000    000000 111 47789999999999987532  


Q ss_pred             cCCcEEEEcCCCC
Q 015872          277 INGRTLTFSGPRA  289 (399)
Q Consensus       277 ~~g~~~~l~~~~~  289 (399)
                      ..|+++++.|+..
T Consensus       256 ~tG~~i~vdGG~~  268 (273)
T 1ae1_A          256 ITGQIIWADGGFT  268 (273)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             cCCCEEEECCCcc
Confidence            3689999998853

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.84  E-value=3.5e-20  Score=168.96  Aligned_cols=207  Identities=14%  Similarity=0.133  Sum_probs=145.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-Cccc---cc---cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LR---DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.+. ....   +.   ..++.++.+|++|++++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            346889999999999999999999999999999997543 2111   11   2357889999999998887765      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           +...++|+.++.++++++.    +.+..+||++||....  ..+...|+.+|..
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHH
Confidence             79999999994321           1234688898888777774    4567799999998654  2345689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcc------cc--ccc-cCCCCcceeceeHHHHHHHHHHHHh
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE------EK--SVW-GTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~------~~--~~~-~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+.+.+       ..|+++++++||.+.++...........      ..  ..+ ......+ .+.+++|+|++++.++.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL-QFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC-CCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCC-CCcCHHHHHHHHHHHhC
Confidence            998764       2589999999999987654322110000      00  000 0000111 47899999999999997


Q ss_pred             CCc--cCCcEEEEcCCC
Q 015872          274 NEK--INGRTLTFSGPR  288 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~  288 (399)
                      ++.  ..|+++++.|+.
T Consensus       241 ~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             hhhcCCCCCEEEECCCc
Confidence            642  468999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.84  E-value=1.6e-20  Score=173.04  Aligned_cols=206  Identities=13%  Similarity=0.162  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ++|+||||||+|+||.++++.|+++|++|++++|+.++...   .+.  ...+.++.+|++|++++.++++       ++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999997543221   122  2357889999999988877764       68


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH------cCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA------MGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~------~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      |+|||+||.....           ...++|+.++.++++++..      .+..+||++||.....  .....|+.+|...
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~  182 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV  182 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHH
Confidence            9999999943221           2235899999999888754      4567999999986543  3456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcc------c--cccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE------E--KSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +.+.+       ..|+++..++||.+..+...........      .  ...+......+ .+.+++|+|++++.++.++
T Consensus       183 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~  261 (279)
T 3sju_A          183 VGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLG-RYSTPEEVAGLVGYLVTDA  261 (279)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTS-SCBCHHHHHHHHHHHTSSG
T ss_pred             HHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHhCcc
Confidence            88763       2689999999999986554332110000      0  01111111112 4788999999999998764


Q ss_pred             c--cCCcEEEEcCCC
Q 015872          276 K--INGRTLTFSGPR  288 (399)
Q Consensus       276 ~--~~g~~~~l~~~~  288 (399)
                      .  ..|+++++.||.
T Consensus       262 a~~itG~~i~vdGG~  276 (279)
T 3sju_A          262 AASITAQALNVCGGL  276 (279)
T ss_dssp             GGGCCSCEEEESTTC
T ss_pred             ccCcCCcEEEECCCc
Confidence            3  468999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.84  E-value=3.7e-20  Score=168.60  Aligned_cols=207  Identities=15%  Similarity=0.189  Sum_probs=148.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC--Ccc---ccc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--PAD---FLR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~--~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .|+|+||||+|+||.++++.|+++|++|++++|+.++  ...   .+.  ..++.++++|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999997543  211   111  2357889999999988887765       7


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCC-cEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGI-QKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v-~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +|+|||+||.....           ...++|+.++.++++++..    .+. .+||++||.....  .+...|+.+|...
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            99999999943221           2346889998888887764    366 7999999976532  3456899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhc----c--cc--ccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPIL----E--EK--SVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~----~--~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +.+.+       ..|+++++++||.+..+..........    .  ..  ..+....... .+.+.+|+|++++.++.++
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~l~s~~  240 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALG-RPSVPEDVAGLVSFLASEN  240 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTS-SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCC-CccCHHHHHHHHHHHhCcc
Confidence            98763       258999999999998665432110000    0  00  0011110111 4788999999999999764


Q ss_pred             c--cCCcEEEEcCCCCC
Q 015872          276 K--INGRTLTFSGPRAW  290 (399)
Q Consensus       276 ~--~~g~~~~l~~~~~~  290 (399)
                      .  ..|+++++.|+..+
T Consensus       241 ~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          241 SNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GTTCCSCEEEESSSSCC
T ss_pred             cCCCCCCEEEECCCEec
Confidence            2  46899999988543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=1.1e-20  Score=172.81  Aligned_cols=208  Identities=15%  Similarity=0.107  Sum_probs=150.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+.++..+   .+.  ..++.++++|++|++++.++++       
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543221   111  1357889999999998877764       


Q ss_pred             CCCEEEECCCCC-CC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      ++|+|||+||.. ..           ...+++|+.++.++++++..    .+ .+||++||.....  .....|+.+|..
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence            689999999842 11           12246899999888887643    33 5999999986543  344679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcc------c--cccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE------E--KSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .+.+.+       ..|+++..++||.++++....+......      .  ...+......+ .+.+++|+|++++.++.+
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~L~s~  245 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLK-RLPTEDEVASAILFMASD  245 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSS-SCCBHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcc-cCCCHHHHHHHHHHHcCc
Confidence            998763       3789999999999987654433211100      0  00111111222 578999999999999976


Q ss_pred             Cc--cCCcEEEEcCCCC
Q 015872          275 EK--INGRTLTFSGPRA  289 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~~  289 (399)
                      ..  ..|+++++.||..
T Consensus       246 ~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          246 LASGITGQALDVNCGEY  262 (264)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             cccCCCCCEEEECCCcc
Confidence            43  4689999999864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.84  E-value=6.3e-21  Score=173.60  Aligned_cols=209  Identities=15%  Similarity=0.148  Sum_probs=148.1

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc------CCCEE
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTV  152 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~------~~d~V  152 (399)
                      +.++.|+|+||||+|+||.+++++|+++|++|++++|+.++....+ ...+.++++|++|++++.++++      ++|++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            3456789999999999999999999999999999999643322222 2368899999999998887775      79999


Q ss_pred             EECCCCC------------CC---CcchhccHHHHHHHHHHHHHc------------CCcEEEEecccCCCCC--CCCcH
Q 015872          153 IDCATGR------------PE---EPIKKVDWEGKVALIQCAKAM------------GIQKYVFYSIHNCDKH--PEVPL  203 (399)
Q Consensus       153 i~~a~~~------------~~---~~~~~~n~~~~~~l~~aa~~~------------~v~~~V~~Ss~~~~~~--~~~~y  203 (399)
                      ||+||..            +.   +..+++|+.++.++++++...            +-.+||++||......  +...|
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY  163 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHH
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccH
Confidence            9999832            11   233568999999999888753            2348999999876533  23579


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+|...+.+.+       ..|+++..++||.+..+...........   .+.........+.+.+|+|++++.++.++.
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~r~~~p~dva~~v~~l~s~~~  240 (257)
T 3tl3_A          164 SASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARA---SLGKQVPHPSRLGNPDEYGALAVHIIENPM  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHH---HHHHTSSSSCSCBCHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHH---HHHhcCCCCCCccCHHHHHHHHHHHhcCCC
Confidence            999999987763       3689999999999986654432211111   000000110147889999999999999876


Q ss_pred             cCCcEEEEcCCCCCC
Q 015872          277 INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s  291 (399)
                      ..|+++++.||..++
T Consensus       241 itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          241 LNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CCSCEEEESTTC---
T ss_pred             CCCCEEEECCCccCC
Confidence            789999999986544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.84  E-value=3.7e-21  Score=176.01  Aligned_cols=206  Identities=15%  Similarity=0.076  Sum_probs=146.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      ..++.|+|+||||+|+||.++++.|+++|++|.+++|+.++..+...  ..++.++++|++|++++.++++       ++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            34667899999999999999999999999999999997543322221  2358899999999998887765       79


Q ss_pred             CEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||....           ...+++|+.++.++.+++    ++.+..+||++||.....  .+...|+.+|...+.
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG  182 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHH
Confidence            999999994321           223458999965555544    556677999999976542  334679999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+       ..|+++..++||.+..+..........   ..+......+ .+.+.+|+|++++.++.++.  ..|++++
T Consensus       183 ~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~p~~-r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          183 FSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQK---EAIMAMIPMK-RMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHH---HHHHTTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHH---HHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            763       358999999999998665433211111   0111111112 47788999999999987643  3689999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||.
T Consensus       259 vdGG~  263 (266)
T 3grp_A          259 INGGM  263 (266)
T ss_dssp             ESTTC
T ss_pred             ECCCe
Confidence            99874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=1.2e-20  Score=173.91  Aligned_cols=207  Identities=12%  Similarity=0.109  Sum_probs=148.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--C---CcEEEEccCCCCCcHHHHhc-----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--W---GATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~---~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+..  .   ++.++++|++|++++.++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999997543221   1111  1   57889999999988877765     


Q ss_pred             --CCCEEEECCCCCCCC---------------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC---CCCCcH
Q 015872          148 --GVHTVIDCATGRPEE---------------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK---HPEVPL  203 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~---------------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~---~~~~~y  203 (399)
                        ++|+|||+||.....               ...++|+.++.++++++..    .+ .+||++||.....   .+...|
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY  162 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHH
Confidence              699999999943221               1235789999888888764    34 7999999986543   345679


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccch--hh----hccccccccCCCCcceeceeHHHHHHHHHH
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VP----ILEEKSVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      +.+|...+.+.+       ..|+++++++||.+.++......  ..    .......+......+ .+.+++|+|++++.
T Consensus       163 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~pedvA~~v~~  241 (280)
T 1xkq_A          163 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG-AAGKPEHIANIILF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS-SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCC-CCCCHHHHHHHHHH
Confidence            999999998763       36899999999999876543220  00    000000010000111 47899999999999


Q ss_pred             HHhCC---ccCCcEEEEcCCCC
Q 015872          271 ALRNE---KINGRTLTFSGPRA  289 (399)
Q Consensus       271 ~l~~~---~~~g~~~~l~~~~~  289 (399)
                      ++.++   ...|+++++.|+..
T Consensus       242 l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          242 LADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGG
T ss_pred             hcCcccccCccCCeEEECCCcc
Confidence            98654   34689999998854

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.84  E-value=2.8e-20  Score=167.85  Aligned_cols=195  Identities=12%  Similarity=0.079  Sum_probs=146.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc---
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      .|+|+||||+|+||.+++++|+++|+       +|++++|+.++...   .+.  ..++.++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999       99999997433221   111  1247889999999988887775   


Q ss_pred             ----CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHH
Q 015872          148 ----GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       148 ----~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                          ++|+|||+||.....           ..+++|+.++.++++++.    +.+..+||++||.....  .+...|+.+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence                699999999943221           224589999988888874    34678999999987643  345679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      |...+.+.+       ..|++++++|||.++++......     ..       . ...+++++|+|++++.++.++.  .
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~-------~-~~~~~~~~dva~~~~~l~~~~~~~~  228 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----DE-------M-QALMMMPEDIAAPVVQAYLQPSRTV  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----ST-------T-GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----cc-------c-cccCCCHHHHHHHHHHHHhCCcccc
Confidence            999998763       36899999999999876543210     00       1 2268899999999999998754  2


Q ss_pred             CCcEEEEcCCCCC
Q 015872          278 NGRTLTFSGPRAW  290 (399)
Q Consensus       278 ~g~~~~l~~~~~~  290 (399)
                      .|+++...+++.+
T Consensus       229 ~g~~~~~~~~~~~  241 (244)
T 2bd0_A          229 VEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEETTCCC
T ss_pred             chheEEecccccc
Confidence            4667777776544

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=4e-20  Score=169.44  Aligned_cols=208  Identities=15%  Similarity=0.157  Sum_probs=148.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+..+....    +.  ..++.++.+|++|.+++.++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999653322111    11  2368999999999988877765       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||.....           ..+++|+.++.++++++.    +.+..+||++||...  ...+...|+.+|...
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  182 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI  182 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHH
Confidence            799999999943221           234689999888877764    346679999999754  233456899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+............. +.. ..... .+.+++|+|++++.++.++.  ..|++
T Consensus       183 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~-~~~~~-~~~~p~dvA~~v~~L~s~~~~~itG~~  259 (269)
T 3gk3_A          183 HGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAK-ILP-QIPVG-RLGRPDEVAALIAFLCSDDAGFVTGAD  259 (269)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CC-SGG-GCTTS-SCBCHHHHHHHHHHHTSTTCTTCCSCE
T ss_pred             HHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHH-hhh-cCCcC-CccCHHHHHHHHHHHhCCCcCCeeCcE
Confidence            87763       258999999999998665443221111100 111 11111 46789999999999997643  46899


Q ss_pred             EEEcCCCCCC
Q 015872          282 LTFSGPRAWT  291 (399)
Q Consensus       282 ~~l~~~~~~s  291 (399)
                      +++.||..++
T Consensus       260 i~vdgG~~~s  269 (269)
T 3gk3_A          260 LAINGGMHMS  269 (269)
T ss_dssp             EEESTTSCCC
T ss_pred             EEECCCEeCc
Confidence            9999986543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.84  E-value=1.8e-20  Score=169.69  Aligned_cols=206  Identities=15%  Similarity=0.113  Sum_probs=149.9

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +.++.|+++||||+|+||.++++.|+++|++|++++|+.+.......  ...+..+++|++|++++.++++       ++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            34567899999999999999999999999999999997543222111  1246789999999998887775       79


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                      |++||+||.....           ...++|+.++.++++++..    .+..+||++||...  ...+...|+.+|...+.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIG  164 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence            9999999943221           2346899999888887743    46679999999754  33456789999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+       ..|+++..++||.+..+..........   ..+......+ .+.+++|+|++++.++.++.  ..|++++
T Consensus       165 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~p~~-r~~~p~dva~~v~~L~s~~~~~itG~~i~  240 (248)
T 3op4_A          165 FTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQR---TATLAQVPAG-RLGDPREIASAVAFLASPEAAYITGETLH  240 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHH---HHHHHTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHH---HHHHhcCCCC-CCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            763       368999999999987654432211100   0111111112 47889999999999987643  3689999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||.
T Consensus       241 vdgG~  245 (248)
T 3op4_A          241 VNGGM  245 (248)
T ss_dssp             ESTTS
T ss_pred             ECCCe
Confidence            99874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.84  E-value=1.9e-20  Score=171.69  Aligned_cols=207  Identities=12%  Similarity=0.076  Sum_probs=150.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+....   .+.  ...+..+.+|++|++++.++++       
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997443221   111  1257889999999988877765       


Q ss_pred             CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||....           +..+++|+.++.++++++.    +.+-.+||++||....  ..+...|+.+|...
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  184 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV  184 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHH
Confidence            79999999994322           1234689999999888774    3455689999997542  33456899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+....+.....   ..+......+ .+.+.+|+|++++.++..+  ...|++
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG~~  260 (270)
T 3ftp_A          185 AGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQ---TALKTQIPLG-RLGSPEDIAHAVAFLASPQAGYITGTT  260 (270)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHH---HHHHTTCTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHH---HHHHhcCCCC-CCCCHHHHHHHHHHHhCCCcCCccCcE
Confidence            87763       268999999999998665432211110   0111111112 4778999999999998653  346899


Q ss_pred             EEEcCCCCC
Q 015872          282 LTFSGPRAW  290 (399)
Q Consensus       282 ~~l~~~~~~  290 (399)
                      +++.||..+
T Consensus       261 i~vdGG~~~  269 (270)
T 3ftp_A          261 LHVNGGMFM  269 (270)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCccc
Confidence            999998654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.84  E-value=3e-20  Score=170.59  Aligned_cols=208  Identities=15%  Similarity=0.103  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---ccccc--CCcEEEEccCCCCCcHHHHhc------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD--WGATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+. ...   ..+..  ..+.++++|++|.+++.++.+      +
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            45678999999999999999999999999999999752 211   11222  247889999999988776643      7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      +|+|||+||....           ....++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|...+
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~  186 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVV  186 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHH
Confidence            9999999994322           123468999998888877    445667999999986543  34567999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+..+........- .....+......+ .+.+++|+|++++.++.++  ...|+++
T Consensus       187 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~-r~~~pedva~~v~~L~s~~a~~itG~~i  264 (273)
T 3uf0_A          187 GLTRALASEWAGRGVGVNALAPGYVVTANTAALRADD-ERAAEITARIPAG-RWATPEDMVGPAVFLASDAASYVHGQVL  264 (273)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH-HHHHHHHHHSTTS-SCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCH-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            8763       26899999999999865543221100 0000000000111 4778899999999999764  3468999


Q ss_pred             EEcCCCCC
Q 015872          283 TFSGPRAW  290 (399)
Q Consensus       283 ~l~~~~~~  290 (399)
                      ++.||...
T Consensus       265 ~vdGG~~~  272 (273)
T 3uf0_A          265 AVDGGWLA  272 (273)
T ss_dssp             EESTTGGG
T ss_pred             EECcCccC
Confidence            99998643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.84  E-value=3.6e-20  Score=168.51  Aligned_cols=206  Identities=16%  Similarity=0.148  Sum_probs=146.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999997543221   111  1257889999999998888775       799


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      +|||+||.....           ..+++|+.++.++++++..    .+ ..+||++||.....  .....|+.+|...+.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            999999843221           2346888888777766643    35 57999999876432  334579999999998


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhcc-----cc---ccccCCCCcceeceeHHHHHHHHHHHHhCC--
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE-----EK---SVWGTDALTRIAYMDTQDIARLTFVALRNE--  275 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--  275 (399)
                      +.+       ..|+++++++||.+.+++..........     ..   ..+....... .+.+.+|+|++++.++.++  
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG-RLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC-SCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCcccc
Confidence            764       2589999999999987654322100000     00   0011111111 4789999999999999764  


Q ss_pred             ccCCcEEEEcCCCC
Q 015872          276 KINGRTLTFSGPRA  289 (399)
Q Consensus       276 ~~~g~~~~l~~~~~  289 (399)
                      ...|+++.+.|+..
T Consensus       241 ~~tG~~i~vdGG~~  254 (256)
T 1geg_A          241 YMTGQSLLIDGGMV  254 (256)
T ss_dssp             TCCSCEEEESSSSS
T ss_pred             CCCCCEEEeCCCcc
Confidence            24689999998753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.84  E-value=4.9e-20  Score=168.52  Aligned_cols=206  Identities=15%  Similarity=0.094  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCC-hhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc---cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATG-TLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR---DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG-~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~---~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+|+||||+| .||.+++++|+++|++|++++|+.++..+   .+.   ..++.++++|++|++++.++++     
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            46678999999998 59999999999999999999997543221   111   1368999999999998877764     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc-----CCcEEEEecccCCC--CCCCCcHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~-----~v~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                        .+|+|||+||.....           ..+++|+.++.++++++...     +..+||++||....  ..+...|+.+|
T Consensus        99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  178 (266)
T 3o38_A           99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK  178 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHH
Confidence              689999999943221           23467999999988887654     45689999987653  33456799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KIN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~  278 (399)
                      ...+.+.+       ..|+++..++||.+..+........-..  ..+......+ .+.+.+|+|++++.++.++  ...
T Consensus       179 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~-r~~~~~dva~~i~~l~s~~~~~~t  255 (266)
T 3o38_A          179 AGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL--DRLASDEAFG-RAAEPWEVAATIAFLASDYSSYMT  255 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTS-SCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH--HHHHhcCCcC-CCCCHHHHHHHHHHHcCccccCcc
Confidence            99998763       2689999999999886654332111100  1111111122 5788999999999999763  346


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++++.+|.
T Consensus       256 G~~i~vdgG~  265 (266)
T 3o38_A          256 GEVVSVSSQR  265 (266)
T ss_dssp             SCEEEESSCC
T ss_pred             CCEEEEcCCc
Confidence            8999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.84  E-value=1.1e-20  Score=172.06  Aligned_cols=206  Identities=14%  Similarity=0.131  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +.|+|+||||+|+||.+++++|+++|++|+++ .|+.+....   .+..  .++.++++|++|++++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999997 665332211   1111  257889999999988877764       5


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|+|||+||.....           ...++|+.++.++++++    ++.+..+||++||....  ..+...|+.+|...+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            79999999833221           23468999998888887    44456799999998754  344568999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..++||.+..+....+...- .....+......+ .+.+++|+|++++.++.++.  ..|+++
T Consensus       163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~-r~~~~~dva~~v~~L~s~~~~~itG~~i  240 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE-DLLEDARQNTPAG-RMVEIKDMVDTVEFLVSSKADMIRGQTI  240 (258)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH-HHHHHHHHHCTTS-SCBCHHHHHHHHHHHTSSTTTTCCSCEE
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH-HHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            8764       25899999999999876544322110 0000000000111 47889999999999998643  468999


Q ss_pred             EEcCCCC
Q 015872          283 TFSGPRA  289 (399)
Q Consensus       283 ~l~~~~~  289 (399)
                      ++.||..
T Consensus       241 ~vdGG~~  247 (258)
T 3oid_A          241 IVDGGRS  247 (258)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            9999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.84  E-value=1.6e-20  Score=170.58  Aligned_cols=206  Identities=14%  Similarity=0.080  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +++.|+|+||||+|+||++++++|+++|++|++++|+.++......  ..++.++++|++|++++.++++       .+|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3556899999999999999999999999999999997433221111  2357889999999988877764       479


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHH----HHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +|||+||.....           ...++|+.++..+.+    .+++.+ .+||++||.....  .+...|+.+|...+.+
T Consensus        83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (253)
T 1hxh_A           83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence            999999943221           123577776655444    455556 7999999987643  3345799999999987


Q ss_pred             HHh-------C--CCCEEEEecCcccccccccchhhhccccccccC---CCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          214 LQD-------S--GLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT---DALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       214 l~~-------~--g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .+.       .  |++++++|||.++++............ ..+..   ..... .+.+.+|+|++++.++.++.  ..|
T Consensus       162 ~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~p~~-~~~~~~dvA~~~~~l~s~~~~~~tG  239 (253)
T 1hxh_A          162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK-EMVLHDPKLNRAG-RAYMPERIAQLVLFLASDESSVMSG  239 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH-HHHBCBTTTBTTC-CEECHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhH-HHHhhhhccCccC-CCCCHHHHHHHHHHHcCccccCCCC
Confidence            643       3  899999999999876543211100000 00100   00111 47899999999999997643  468


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++++.|+.
T Consensus       240 ~~~~vdgG~  248 (253)
T 1hxh_A          240 SELHADNSI  248 (253)
T ss_dssp             CEEEESSSC
T ss_pred             cEEEECCCc
Confidence            999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.84  E-value=4.3e-20  Score=171.18  Aligned_cols=208  Identities=11%  Similarity=0.091  Sum_probs=152.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.......    +.  ..++.++++|++|++++.++++      
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56678999999999999999999999999999999975432211    11  1257889999999988877765      


Q ss_pred             -CCCEEEECCCCCC-C-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                       ++|+|||+||... .           +..+++|+.++.++++++...-  ..+||++||....  ......|+.+|...
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  203 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAI  203 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHH
Confidence             7899999998431 1           2234689999999999998752  3489999997653  33456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+........-.  ...+......+ .+.+++|+|++++.++.++.  ..|++
T Consensus       204 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~p~~-r~~~p~dvA~~v~~L~s~~~~~itG~~  280 (291)
T 3ijr_A          204 VAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKK--VSQFGSNVPMQ-RPGQPYELAPAYVYLASSDSSYVTGQM  280 (291)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHH--HHHTTTTSTTS-SCBCGGGTHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHH--HHHHHccCCCC-CCcCHHHHHHHHHHHhCCccCCCcCCE
Confidence            98763       258999999999998765432211100  01111111122 57789999999999997643  46899


Q ss_pred             EEEcCCCCC
Q 015872          282 LTFSGPRAW  290 (399)
Q Consensus       282 ~~l~~~~~~  290 (399)
                      +++.||..+
T Consensus       281 i~vdGG~~~  289 (291)
T 3ijr_A          281 IHVNGGVIV  289 (291)
T ss_dssp             EEESSSCCC
T ss_pred             EEECCCccc
Confidence            999988543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.83  E-value=4.8e-20  Score=170.17  Aligned_cols=208  Identities=14%  Similarity=0.137  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+..+..+    .+..  .++.++.+|++|.+++.++++      
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3556899999999999999999999999999999997543211    1222  257889999999988776654      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--C-CCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--H-PEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~-~~~~y~~~K~~~  210 (399)
                       ++|+|||+||....           +..+++|+.++.++++++...  +..+||++||.....  . +...|+.+|...
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~  185 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI  185 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHH
Confidence             68999999994322           123468999999999999876  567999999976543  2 256799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccc------c--ccccC--CCCcceeceeHHHHHHHHHHHHh
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE------K--SVWGT--DALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~------~--~~~~~--~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      +.+.+       ..|+++++++||.+.++............      .  ..+..  ..... .+.+.+|+|++++.++.
T Consensus       186 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~l~s  264 (283)
T 1g0o_A          186 ETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR-RVGLPIDIARVVCFLAS  264 (283)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC-SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCC-CCcCHHHHHHHHHHHhC
Confidence            98764       35899999999999876543221110000      0  00100  10111 46789999999999997


Q ss_pred             CCc--cCCcEEEEcCCC
Q 015872          274 NEK--INGRTLTFSGPR  288 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~  288 (399)
                      ++.  ..|+++++.||.
T Consensus       265 ~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          265 NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             ccccCcCCCEEEeCCCc
Confidence            643  468999998874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.83  E-value=5.8e-20  Score=169.36  Aligned_cols=209  Identities=13%  Similarity=0.110  Sum_probs=148.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC---------c-------cccc--cCCcEEEEccCCCCCc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---------A-------DFLR--DWGATVVNADLSKPET  141 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~---------~-------~~l~--~~~v~~~~~Dl~d~~~  141 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+..         .       ..+.  ...+.++++|++|+++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46678999999999999999999999999999999852210         0       1111  1257889999999998


Q ss_pred             HHHHhc-------CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCCC-
Q 015872          142 IPATLV-------GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCDK-  197 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~~-  197 (399)
                      +.++++       ++|+|||+||.....           ..+++|+.++.++++++.    +.+ ..+||++||..... 
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA  171 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence            887765       799999999943221           223589999988888874    333 46899999976543 


Q ss_pred             -CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccc-hhhhcccc----ccccCCCCcceeceeHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQY-AVPILEEK----SVWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~v~v~Dv  264 (399)
                       .....|+.+|...+.+.+       ..|+++..++||.+..+..... ........    ..+.........+++++|+
T Consensus       172 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dv  251 (280)
T 3pgx_A          172 TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEV  251 (280)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHH
Confidence             334679999999998763       2689999999999987654321 11111000    0000011111248899999


Q ss_pred             HHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          265 ARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       265 a~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      |++++.++.++.  ..|+++++.||.
T Consensus       252 A~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          252 ADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999997643  468999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.83  E-value=4.6e-20  Score=169.65  Aligned_cols=203  Identities=14%  Similarity=0.064  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec-CCCCCcc---ccc---cCCcEEEEccCCCC----CcHHHHhc--
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPAD---FLR---DWGATVVNADLSKP----ETIPATLV--  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r-~~~~~~~---~l~---~~~v~~~~~Dl~d~----~~l~~~~~--  147 (399)
                      |+.|+|+||||+|+||.++++.|+++|++|++++| +.++...   .+.   ..++.++++|++|.    +++.++++  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            45688999999999999999999999999999999 5332211   111   23578899999999    87777765  


Q ss_pred             -----CCCEEEECCCCCCC-------------------C---cchhccHHHHHHHHHHHHHc---CC------cEEEEec
Q 015872          148 -----GVHTVIDCATGRPE-------------------E---PIKKVDWEGKVALIQCAKAM---GI------QKYVFYS  191 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~~-------------------~---~~~~~n~~~~~~l~~aa~~~---~v------~~~V~~S  191 (399)
                           ++|+|||+||....                   +   ..+++|+.++.++++++...   +.      .+||++|
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence                 79999999993211                   1   23468999999999998874   33      7999999


Q ss_pred             ccCCCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHH
Q 015872          192 IHNCDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ  262 (399)
Q Consensus       192 s~~~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  262 (399)
                      |.....  .+...|+.+|...+.+.+       ..|+++++++||.+.++  ..+......  .+. ........+.+++
T Consensus       169 S~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~~~~~--~~~-~~~p~~r~~~~~~  243 (276)
T 1mxh_A          169 DAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQE--EYR-RKVPLGQSEASAA  243 (276)
T ss_dssp             CGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCHHHHH--HHH-TTCTTTSCCBCHH
T ss_pred             chhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCHHHHH--HHH-hcCCCCCCCCCHH
Confidence            986543  345679999999998763       25899999999999876  111111000  000 0001111278999


Q ss_pred             HHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          263 DIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       263 Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      |+|++++.++.++.  ..|+++++.|+.
T Consensus       244 dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          244 QIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCch
Confidence            99999999997643  368999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.83  E-value=4.2e-20  Score=168.98  Aligned_cols=193  Identities=16%  Similarity=0.179  Sum_probs=140.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .+++|+|+||||+|+||.++++.|+++|++|++++|+.++. +.+...++.++++|++|.+++.++++       ++|+|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            35568999999999999999999999999999999974432 22333478899999999988887775       78999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||....           +...++|+.++.++++++    ++.+..+||++||.....  .+...|+.+|...+.+.+
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (266)
T 3p19_A           92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISE  171 (266)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHH
Confidence            999994321           122468999998866655    456778999999986543  344679999999997753


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                             ..|+++..++||.+..+............. ..+..  ... .+++++|+|++++.++.++.
T Consensus       172 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~-r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          172 NVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV--DMG-GVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH--HTT-CCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc--ccc-CCCCHHHHHHHHHHHHcCCC
Confidence                   368999999999998765443221110000 00000  011 47889999999999999865

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.83  E-value=9.1e-20  Score=167.01  Aligned_cols=204  Identities=13%  Similarity=0.142  Sum_probs=148.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +...|+||||||+|+||.++++.|+++|++|++++|+.....     ..+..+++|++|++++.++++       ++|+|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            456789999999999999999999999999999999855432     257789999999998887765       79999


Q ss_pred             EECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||.....           ..+++|+.++.++++++.    +.+..+||++||.....  .....|+.+|...+.+.+
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  165 (269)
T 3vtz_A           86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTR  165 (269)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHH
Confidence            9999943221           123589999988887764    34667999999987643  345679999999998764


Q ss_pred             ----h--CCCCEEEEecCcccccccccchhhhc-------cc-cccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          216 ----D--SGLPHVIIRLCGFMQGLIGQYAVPIL-------EE-KSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       216 ----~--~g~~~~ilRp~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                          +  .++++..++||.+..+..........       .. ...+......+ .+.+++|+|++++.++.++.  ..|
T Consensus       166 ~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG  244 (269)
T 3vtz_A          166 SVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMG-RIGRPEEVAEVVAFLASDRSSFITG  244 (269)
T ss_dssp             HHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCCccCCCcC
Confidence                2  37999999999998765432211000       00 00111111112 47789999999999997643  468


Q ss_pred             cEEEEcCCCC
Q 015872          280 RTLTFSGPRA  289 (399)
Q Consensus       280 ~~~~l~~~~~  289 (399)
                      +++++.||..
T Consensus       245 ~~i~vdGG~~  254 (269)
T 3vtz_A          245 ACLTVDGGLL  254 (269)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECCCcc
Confidence            9999999853

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.83  E-value=8.9e-21  Score=174.71  Aligned_cols=210  Identities=15%  Similarity=0.082  Sum_probs=150.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +..|+|+||||+|+||.++++.|+++|++|++++|+.+....   .+.  ...+.++.+|++|++++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999997543221   111  1257889999999988877765       7


Q ss_pred             CCEEEECCCCC-CC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC---CCCCCcHHHHHHH
Q 015872          149 VHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD---KHPEVPLMEIKYC  209 (399)
Q Consensus       149 ~d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~---~~~~~~y~~~K~~  209 (399)
                      +|+|||+||.. ..           +...++|+.++.++++++..    .+..+||++||....   ..+...|+.+|..
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  165 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAG  165 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHH
Confidence            99999999943 11           12346899999888887643    355699999997654   2345679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccc-cccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      .+.+.+       ..|+++..++||.+..+............ ...+......+ .+.+++|+|++++.++.++.  ..|
T Consensus       166 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~a~~itG  244 (280)
T 3tox_A          166 LIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALK-RIARPEEIAEAALYLASDGASFVTG  244 (280)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccC-CCcCHHHHHHHHHHHhCccccCCcC
Confidence            998763       35899999999999865433211000000 00111111112 47889999999999997643  468


Q ss_pred             cEEEEcCCCCCC
Q 015872          280 RTLTFSGPRAWT  291 (399)
Q Consensus       280 ~~~~l~~~~~~s  291 (399)
                      +++++.||..++
T Consensus       245 ~~i~vdGG~~~~  256 (280)
T 3tox_A          245 AALLADGGASVT  256 (280)
T ss_dssp             CEEEESTTGGGC
T ss_pred             cEEEECCCcccc
Confidence            999999986654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.83  E-value=4e-20  Score=169.16  Aligned_cols=209  Identities=12%  Similarity=0.054  Sum_probs=149.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c---ccCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L---RDWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l---~~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+.   +   ...++.++++|++|++++.++++      
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999975432211   1   12368899999999999887765      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----C-CcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                       ++|+|||+||.....           ..+++|+.++.++++++...    + -.+||++||.....  .....|+.+|.
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  176 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA  176 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence             799999999943221           23468999988888877533    3 35999999986543  34567999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+       ..|+++..++||.+..+........-... ..+....... .+.+.+|+|++++.++.++.  ..|
T Consensus       177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~p~~-r~~~p~dva~~v~~L~s~~~~~itG  254 (266)
T 4egf_A          177 GLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKS-APMIARIPLG-RFAVPHEVSDAVVWLASDAASMING  254 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHH-HHHHTTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHH-HHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCccC
Confidence            9998763       25899999999999865433221000000 0001111111 46789999999999997643  468


Q ss_pred             cEEEEcCCCCC
Q 015872          280 RTLTFSGPRAW  290 (399)
Q Consensus       280 ~~~~l~~~~~~  290 (399)
                      +++++.||..+
T Consensus       255 ~~i~vdGG~~~  265 (266)
T 4egf_A          255 VDIPVDGGYTM  265 (266)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECCCccC
Confidence            99999998543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.2e-19  Score=170.59  Aligned_cols=220  Identities=13%  Similarity=0.090  Sum_probs=144.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cc---cc----c--cCCcEEEEccCCCCCcHHHHhc--
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FL----R--DWGATVVNADLSKPETIPATLV--  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~---~l----~--~~~v~~~~~Dl~d~~~l~~~~~--  147 (399)
                      .|++|+|+||||+|+||.++++.|+++|++|++.+|+.... ..   .+    .  ..++.++++|++|++++.++++  
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999974321 11   11    1  1358899999999999888876  


Q ss_pred             -----CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC---CCCCcHH
Q 015872          148 -----GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK---HPEVPLM  204 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~---~~~~~y~  204 (399)
                           ++|+|||+||....           ....++|+.|+.++++++    ++.+..++|++||.....   .....|+
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHH
Confidence                 79999999994321           123478999999999888    666778999999987552   2245799


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccc--cch-----hhh--ccccccccCCCCc-------ceeceeH
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIG--QYA-----VPI--LEEKSVWGTDALT-------RIAYMDT  261 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~--~~~-----~~~--~~~~~~~~~~~~~-------~~~~v~v  261 (399)
                      .+|..+|.+.+       ..|+++++++||.+.++...  ...     ...  .......+...+.       ..+..++
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p  241 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADV  241 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCT
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCH
Confidence            99999998763       26899999999998632210  000     000  0000000000000       0022578


Q ss_pred             HHHHHHHHHHHhCCccC-CcEEEEcCCCCCCHHHHHHHHH
Q 015872          262 QDIARLTFVALRNEKIN-GRTLTFSGPRAWTTQEVITLCE  300 (399)
Q Consensus       262 ~Dva~~i~~~l~~~~~~-g~~~~l~~~~~~s~~e~~~~~~  300 (399)
                      +|+|++++.+++.+... ...+.+ ++....+..+.+.+.
T Consensus       242 ~~vA~aiv~~~~~~~~~~~~~~~~-gp~~~~~~~~~~~~~  280 (324)
T 3u9l_A          242 SLVADAIVRVVGTASGKRPFRVHV-DPAEDGADVGFSVLD  280 (324)
T ss_dssp             HHHHHHHHHHHTSCTTCCCSEEEE-CTTCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCCeEEEe-CCcchHHHHHHHHHH
Confidence            99999999999887422 334444 444456544444433

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.83  E-value=6.1e-20  Score=170.37  Aligned_cols=210  Identities=14%  Similarity=0.102  Sum_probs=151.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-Ccc----ccc--cCCcEEEEccCCCCCcHHHHhc----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PAD----FLR--DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ..++.|+|+||||+|+||.++++.|+++|++|++++|+... ..+    .+.  ..++.++++|++|++++.++++    
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35667899999999999999999999999999999986321 111    111  1357889999999988877664    


Q ss_pred             ---CCCEEEECCCCCC-C-----------CcchhccHHHHHHHHHHHHHcCCc--EEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 ---GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                         ++|+|||+||... .           +..+++|+.++.++++++...-.+  +||++||.....  .....|+.+|.
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  204 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHH
Confidence               7999999999422 1           123468999999999999876544  999999987643  34467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+       ..|+++..++||.+.++........ ......+......+ .+.+.+|+|++++.++.++.  ..|
T Consensus       205 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~p~~-r~~~p~dvA~~v~~L~s~~~~~itG  282 (294)
T 3r3s_A          205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT-QDKIPQFGQQTPMK-RAGQPAELAPVYVYLASQESSYVTA  282 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC-GGGSTTTTTTSTTS-SCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC-HHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCCCC
Confidence            9998763       2589999999999987542111000 00001111111112 46788999999999987643  468


Q ss_pred             cEEEEcCCCCC
Q 015872          280 RTLTFSGPRAW  290 (399)
Q Consensus       280 ~~~~l~~~~~~  290 (399)
                      +++++.||..+
T Consensus       283 ~~i~vdGG~~l  293 (294)
T 3r3s_A          283 EVHGVCGGEHL  293 (294)
T ss_dssp             CEEEESTTCCC
T ss_pred             CEEEECCCccC
Confidence            99999998654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=6.9e-20  Score=168.04  Aligned_cols=206  Identities=13%  Similarity=0.092  Sum_probs=147.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c--cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~--~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++++.|+|+||||+|+||.+++++|+++|++|++++|+..+..+.+    .  ..++.++++|++|++++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4566789999999999999999999999999999999644332221    1  1258899999999988877775     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--CCCCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~  208 (399)
                        ++|+|||+||.....           ...++|+.++.++++++.    +.+..+||++||...  ...+...|+.+|.
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  184 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKG  184 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHH
Confidence              799999999943322           234588888888777664    446679999999754  3345678999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+       ..|+++..++||.+..+...........   .+....... .+.+.+|+|++++.++.++.  ..|
T Consensus       185 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~-~~~~p~dvA~~i~~l~s~~~~~itG  260 (271)
T 4iin_A          185 GMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA---DYVKNIPLN-RLGSAKEVAEAVAFLLSDHSSYITG  260 (271)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGGCTTC-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHH---HHHhcCCcC-CCcCHHHHHHHHHHHhCCCcCCCcC
Confidence            9998763       3689999999999886654332111110   111111112 57889999999999997643  468


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++++.||.
T Consensus       261 ~~i~vdGG~  269 (271)
T 4iin_A          261 ETLKVNGGL  269 (271)
T ss_dssp             CEEEESTTS
T ss_pred             CEEEeCCCe
Confidence            999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.83  E-value=1.1e-20  Score=173.19  Aligned_cols=208  Identities=13%  Similarity=0.115  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.+...+.   +.  ..++.++++|++|++++.++++       
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            45678999999999999999999999999999999975432221   21  1257889999999998887775       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      ++|+|||+||.....           ..+++|+.++.++++++..    .+..+||++||....  ..+...|+.+|...
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~  182 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI  182 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence            799999999943221           2346899999888776643    456799999997653  33456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      +.+.+       ..|+++..++||.+..+........ -..  ..+......+ .+.+++|+|++++.++..+.  ..|+
T Consensus       183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~p~~-r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          183 KMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFD--AWVKARTPAK-RWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHH--HHHHHHSTTC-SCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCCCCc
Confidence            98763       2689999999999987654332110 000  0000000111 46788999999999987643  4689


Q ss_pred             EEEEcCCCCC
Q 015872          281 TLTFSGPRAW  290 (399)
Q Consensus       281 ~~~l~~~~~~  290 (399)
                      ++++.||...
T Consensus       260 ~i~vdGG~~~  269 (271)
T 4ibo_A          260 IIYVDGGMLS  269 (271)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCeec
Confidence            9999998643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.7e-20  Score=172.53  Aligned_cols=212  Identities=17%  Similarity=0.100  Sum_probs=150.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+.......  ..++.++++|++|++++.++++       ++|
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4567899999999999999999999999999999997543222111  2368899999999988877764       789


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +|||+||....           +...++|+.++.++++++..    .+..+||++||.....  .+...|+.+|...+.+
T Consensus       106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (277)
T 3gvc_A          106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL  185 (277)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            99999994322           12346899998888877743    4556899999976543  3446799999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhcccc--ccccC-CCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGT-DALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      .+       ..|+++.+++||.+.++.............  ..... .....-.+.+++|+|++++.++.++.  ..|++
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~  265 (277)
T 3gvc_A          186 SRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTT  265 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            64       368999999999998765432211000000  00000 00000147789999999999997643  46899


Q ss_pred             EEEcCCCCCC
Q 015872          282 LTFSGPRAWT  291 (399)
Q Consensus       282 ~~l~~~~~~s  291 (399)
                      +++.||...+
T Consensus       266 i~vdGG~~~~  275 (277)
T 3gvc_A          266 QIADGGTIAA  275 (277)
T ss_dssp             EEESTTGGGS
T ss_pred             EEECCcchhc
Confidence            9999986543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.83  E-value=1.7e-20  Score=173.08  Aligned_cols=210  Identities=14%  Similarity=0.121  Sum_probs=152.5

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc------CCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV------GVH  150 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~------~~d  150 (399)
                      ..+..|+|+||||+|+||.++++.|+++|++|++++|+.++..+...  ...+.++++|++|.+++.++++      ++|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            34556899999999999999999999999999999997543222111  2368899999999998887775      579


Q ss_pred             EEEEC-CCCCCC----------------CcchhccHHHHHHHHHHHHHc----------CCcEEEEecccCCCC--CCCC
Q 015872          151 TVIDC-ATGRPE----------------EPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNCDK--HPEV  201 (399)
Q Consensus       151 ~Vi~~-a~~~~~----------------~~~~~~n~~~~~~l~~aa~~~----------~v~~~V~~Ss~~~~~--~~~~  201 (399)
                      +|||+ ++....                ....++|+.++.++++++...          +-.+||++||.....  ....
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  185 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT  185 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence            99999 442111                223468999999888877532          334899999986543  3456


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+       ..|+++..++||.+..+...........   .+.........+.+.+|+|++++.++.+
T Consensus       186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~~l~s~  262 (281)
T 3ppi_A          186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALA---KFAANIPFPKRLGTPDEFADAAAFLLTN  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHH---HHHHTCCSSSSCBCHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHH---HHHhcCCCCCCCCCHHHHHHHHHHHHcC
Confidence            79999999987763       3589999999999986654332211111   0101111112578999999999999998


Q ss_pred             CccCCcEEEEcCCCCCC
Q 015872          275 EKINGRTLTFSGPRAWT  291 (399)
Q Consensus       275 ~~~~g~~~~l~~~~~~s  291 (399)
                      +...|+++++.||..++
T Consensus       263 ~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          263 GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             SSCCSCEEEESTTCCCC
T ss_pred             CCcCCcEEEECCCcccC
Confidence            77789999999987654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.2e-19  Score=167.31  Aligned_cols=206  Identities=14%  Similarity=0.115  Sum_probs=141.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+..+..+    .+.  ..++.++++|++|++++.++++      
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3456889999999999999999999999999999974333211    111  1358899999999999888775      


Q ss_pred             -CCCEEEECCCCC--CC-----------CcchhccHHHHHHHHHHHHHc----C---CcEEEEecccCCC--CCCCCcHH
Q 015872          148 -GVHTVIDCATGR--PE-----------EPIKKVDWEGKVALIQCAKAM----G---IQKYVFYSIHNCD--KHPEVPLM  204 (399)
Q Consensus       148 -~~d~Vi~~a~~~--~~-----------~~~~~~n~~~~~~l~~aa~~~----~---v~~~V~~Ss~~~~--~~~~~~y~  204 (399)
                       ++|+|||+||..  ..           +..+++|+.++.++++++...    +   ..+||++||....  ......|+
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  185 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYC  185 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHH
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHH
Confidence             799999999841  11           123468999998888777543    2   4589999997654  33456799


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccC-CCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT-DALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+|...+.+.+       ..|+++..++||.+..+..........   ..+.. ....+ .+.+++|+|++++.++.++.
T Consensus       186 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~  261 (280)
T 4da9_A          186 MSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYD---GLIESGLVPMR-RWGEPEDIGNIVAGLAGGQF  261 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHTSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHH---HHHhhcCCCcC-CcCCHHHHHHHHHHHhCccc
Confidence            99999998763       268999999999998665433211110   00100 00111 47789999999999997654


Q ss_pred             --cCCcEEEEcCCCC
Q 015872          277 --INGRTLTFSGPRA  289 (399)
Q Consensus       277 --~~g~~~~l~~~~~  289 (399)
                        ..|+++++.||..
T Consensus       262 ~~itG~~i~vdGG~~  276 (280)
T 4da9_A          262 GFATGSVIQADGGLS  276 (280)
T ss_dssp             GGGTTCEEEESTTCC
T ss_pred             cCCCCCEEEECCCcc
Confidence              4689999999853

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.83  E-value=1.7e-20  Score=171.22  Aligned_cols=209  Identities=17%  Similarity=0.138  Sum_probs=149.4

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCC--Ccccccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~--~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+  |+||.++++.|+++|++|++++|+...  ..+.+..  .++.++++|++|++++.++++      
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3456889999999  999999999999999999999997530  1111111  247889999999998887775      


Q ss_pred             -CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHH
Q 015872          148 -GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIK  207 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K  207 (399)
                       ++|+|||+||....               +...++|+.++.++++++...-  -.+||++||.....  .+...|+.+|
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK  164 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHH
Confidence             78999999994321               1234689999999999997652  24899999976532  3445799999


Q ss_pred             HHHHHHHHh-------CCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          208 YCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       208 ~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      ...+.+.+.       .|+++++++||.++++......  .....   .+....... .+.+++|+|++++.++.++.  
T Consensus       165 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~p~~-~~~~~~dva~~v~~l~s~~~~~  240 (261)
T 2wyu_A          165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYD---RVAQTAPLR-RNITQEEVGNLGLFLLSPLASG  240 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHH---HHHHHSTTS-SCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHH---HHHhcCCCC-CCCCHHHHHHHHHHHcChhhcC
Confidence            999987642       4899999999999876432211  00000   000000111 36789999999999997533  


Q ss_pred             cCCcEEEEcCCCCCCH
Q 015872          277 INGRTLTFSGPRAWTT  292 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s~  292 (399)
                      ..|++|++.++..++.
T Consensus       241 ~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          241 ITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             CCSCEEEESTTGGGBC
T ss_pred             CCCCEEEECCCccccC
Confidence            3589999999865543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.83  E-value=8.5e-20  Score=167.75  Aligned_cols=206  Identities=15%  Similarity=0.056  Sum_probs=148.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcHHHHhc------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+.+.......     ...+.++++|++|.+++.++++      +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3556899999999999999999999999999999998655432221     2357899999999998887775      7


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCCCCCC--cHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKHPEV--PLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~~~~~--~y~~~K~~~E  211 (399)
                      +|++||+||.....           ...++|+.++.++++++    ++.+..+||++||.........  .|+.+|...+
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  189 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQH  189 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHH
Confidence            89999999943221           22468999998888877    4456679999999876554333  4999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhcccc-ccccCC-CCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTD-ALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+       ..|+++..++||.+..+............. ...... +..  .+...+|+|++++.++.++.  ..|+
T Consensus       190 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v~fL~s~~a~~itG~  267 (275)
T 4imr_A          190 NLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG--RAGRPEEMVGAALFLASEACSFMTGE  267 (275)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC--SCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC--CCcCHHHHHHHHHHHcCcccCCCCCC
Confidence            8763       258999999999998654332211000000 000000 011  35678999999999997643  4689


Q ss_pred             EEEEcCC
Q 015872          281 TLTFSGP  287 (399)
Q Consensus       281 ~~~l~~~  287 (399)
                      ++++.||
T Consensus       268 ~i~vdGG  274 (275)
T 4imr_A          268 TIFLTGG  274 (275)
T ss_dssp             EEEESSC
T ss_pred             EEEeCCC
Confidence            9999886

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.83  E-value=9.4e-20  Score=167.52  Aligned_cols=204  Identities=13%  Similarity=0.150  Sum_probs=148.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+.....   +..  .++.++++|++|++++.++++       
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999975443221   111  268899999999998888775       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----CC-cEEEEecccCCCC----CCCCcHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----GI-QKYVFYSIHNCDK----HPEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~v-~~~V~~Ss~~~~~----~~~~~y~~~K  207 (399)
                      ++|+|||+||.....           ..+++|+.++.++++++...    +. .+||++||.....    .+...|+.+|
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK  188 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK  188 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence            799999999943221           12358999998888877543    32 5899999876532    2346799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+       ..|+++..++||.+..+....... ..   ..+....... .+.+.+|+|++++.++.++.  ..
T Consensus       189 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~---~~~~~~~p~~-r~~~pedvA~~v~fL~s~~~~~it  263 (276)
T 3r1i_A          189 AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YH---ALWEPKIPLG-RMGRPEELTGLYLYLASAASSYMT  263 (276)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GH---HHHGGGSTTS-SCBCGGGSHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HH---HHHHhcCCCC-CCcCHHHHHHHHHHHcCccccCcc
Confidence            99998763       268999999999998665433211 00   0111111111 46788999999999997643  46


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++++.||.
T Consensus       264 G~~i~vdGG~  273 (276)
T 3r1i_A          264 GSDIVIDGGY  273 (276)
T ss_dssp             SCEEEESTTT
T ss_pred             CcEEEECcCc
Confidence            8999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.83  E-value=7.9e-20  Score=165.01  Aligned_cols=201  Identities=14%  Similarity=0.111  Sum_probs=148.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-----CCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vi~~  155 (399)
                      ++|+|+||||+|+||.++++.|++ .|+.|++.+|+.....     ..+.++++|++|++++.++++     ++|+|||+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            357899999999999999999999 7999999998754222     256899999999999888876     78999999


Q ss_pred             CCCCCC-----------CcchhccHHHHHHHHHHHHHcCC--cEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-----
Q 015872          156 ATGRPE-----------EPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-----  215 (399)
Q Consensus       156 a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-----  215 (399)
                      ||....           +..+++|+.++.++++++...-.  .++|++||.....  .+...|+.+|...+.+.+     
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  157 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALD  157 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            994321           12346899999999999876533  3899999986543  334579999999998764     


Q ss_pred             --hCCCCEEEEecCcccccccccchhhhcc--------ccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          216 --DSGLPHVIIRLCGFMQGLIGQYAVPILE--------EKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                        ..|+++..++||.+..+...........        ....+......+ .+.+++|+|++++.++.++.  ..|++++
T Consensus       158 ~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~l~s~~~~~itG~~i~  236 (244)
T 4e4y_A          158 LAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLN-RIAQPQEIAELVIFLLSDKSKFMTGGLIP  236 (244)
T ss_dssp             HGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCC-CCcCHHHHHHHHHHHhcCccccccCCeEe
Confidence              3689999999999987654432211100        000011111112 47889999999999997643  4689999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||.
T Consensus       237 vdGG~  241 (244)
T 4e4y_A          237 IDGGY  241 (244)
T ss_dssp             ESTTG
T ss_pred             ECCCc
Confidence            99874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.83  E-value=3e-20  Score=170.05  Aligned_cols=212  Identities=15%  Similarity=0.129  Sum_probs=150.7

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc---C
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV---G  148 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~---~  148 (399)
                      +.++.|+|+||||+|+||.+++++|+++|++|++++|+.+...+.   +.    ...+..+.+|++|++++.++++   +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            345678999999999999999999999999999999975432211   11    1246788999999988887775   7


Q ss_pred             CCEEEECCCCCCCC--------c---chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE--------P---IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~--------~---~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|++||+||.....        .   ..++|+.++..+++++    ++.+..+||++||....  ..+...|+.+|...+
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  165 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQL  165 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHH
Confidence            99999999943221        1   2468888876665554    45566799999998654  334567999999999


Q ss_pred             HHHHh-------CCCCEEEEecCcccccccccchhhhcccc---------ccc---cCCCCcceeceeHHHHHHHHHHHH
Q 015872          212 QFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEK---------SVW---GTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       212 ~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .+.+.       .|+++..++||.+..+....+........         ...   ......+ .+.+++|+|++++.++
T Consensus       166 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~pedvA~~v~fL~  244 (267)
T 3t4x_A          166 SLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQ-RLIRPEEIAHLVTFLS  244 (267)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSC-SCBCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCccccc-CccCHHHHHHHHHHHc
Confidence            87642       47999999999988665443322211110         000   0000112 5788999999999998


Q ss_pred             hCCc--cCCcEEEEcCCCCCC
Q 015872          273 RNEK--INGRTLTFSGPRAWT  291 (399)
Q Consensus       273 ~~~~--~~g~~~~l~~~~~~s  291 (399)
                      .+..  ..|+++++.||...+
T Consensus       245 s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          245 SPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             SGGGTTCCSCEEEESTTCSCS
T ss_pred             CccccCccCCeEEECCCcccc
Confidence            7533  468999999986544

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.83  E-value=5.8e-20  Score=169.16  Aligned_cols=208  Identities=17%  Similarity=0.162  Sum_probs=149.8

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--------ccc-------cc--cCCcEEEEccCCCCCc
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--------ADF-------LR--DWGATVVNADLSKPET  141 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--------~~~-------l~--~~~v~~~~~Dl~d~~~  141 (399)
                      .++..|+|+||||+|+||.++++.|+++|++|++++|+....        .+.       +.  ..++.++++|++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            356678999999999999999999999999999999873210        000       11  1358899999999998


Q ss_pred             HHHHhc-------CCCEEEECCCCCCC-------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCCC----
Q 015872          142 IPATLV-------GVHTVIDCATGRPE-------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDKH----  198 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~~~~-------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~~----  198 (399)
                      +.++++       ++|+|||+||....       ...+++|+.++.++++++..    .+ ..+||++||......    
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA  168 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence            888775       79999999994322       23346899999998888643    22 458999999765422    


Q ss_pred             --CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccch-----hhhcccc---ccccCCCCcceeceeH
Q 015872          199 --PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA-----VPILEEK---SVWGTDALTRIAYMDT  261 (399)
Q Consensus       199 --~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~v~v  261 (399)
                        +...|+.+|...+.+.+       ..|+++..++||.+..+......     .......   ..+.....  ..++++
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~p  246 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP--VEVLAP  246 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS--CSSBCH
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC--cCcCCH
Confidence              23469999999998764       35799999999999876543211     0010000   11111111  368899


Q ss_pred             HHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          262 QDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       262 ~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      +|+|++++.++.++.  ..|+++++.||.
T Consensus       247 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          247 EDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            999999999997643  468999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.83  E-value=1.1e-20  Score=173.88  Aligned_cols=211  Identities=13%  Similarity=0.075  Sum_probs=149.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c---ccCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L---RDWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l---~~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++....   +   ...++.++++|++|++++.++++      
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999999985432211   1   12367899999999988877765      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           +..+++|+.++.++++++.    +.+..+||++||....  ......|+.+|..
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAA  183 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHH
Confidence             79999999993322           1234689999999888874    3345699999997542  3345689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+.+       ..|+++..++||.+.+................+......+ .+.+.+|+|++++.++.+..  ..|+
T Consensus       184 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~fL~s~~~~~itG~  262 (277)
T 4fc7_A          184 VDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ-RLGNKTEIAHSVLYLASPLASYVTGA  262 (277)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC-CCcCHHHHHHHHHHHcCCccCCcCCC
Confidence            998764       2589999999999985432111000000000000000111 46789999999999997643  4689


Q ss_pred             EEEEcCCCCCC
Q 015872          281 TLTFSGPRAWT  291 (399)
Q Consensus       281 ~~~l~~~~~~s  291 (399)
                      ++++.||..++
T Consensus       263 ~i~vdGG~~~~  273 (277)
T 4fc7_A          263 VLVADGGAWLT  273 (277)
T ss_dssp             EEEESTTHHHH
T ss_pred             EEEECCCcccC
Confidence            99999986443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.83  E-value=9.8e-20  Score=169.17  Aligned_cols=218  Identities=10%  Similarity=-0.009  Sum_probs=153.4

Q ss_pred             cccccCCCCCCCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcH
Q 015872           70 VQAVNMSPGTPVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETI  142 (399)
Q Consensus        70 ~~~~~~~~~~~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l  142 (399)
                      .|+.++...+.++.|+|+||||+|  +||.++++.|+++|++|++++|+... .+.+.     ...+.++++|++|++++
T Consensus        17 ~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v   95 (296)
T 3k31_A           17 QGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF-KKRVDPLAESLGVKLTVPCDVSDAESV   95 (296)
T ss_dssp             ----CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHHTCCEEEECCTTCHHHH
T ss_pred             cCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhcCCeEEEEcCCCCHHHH
Confidence            344455555667789999999998  99999999999999999999998432 11111     12478899999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcCC--cEEEEecccCCC--
Q 015872          143 PATLV-------GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCD--  196 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~--  196 (399)
                      .++++       ++|+|||+||....               ...+++|+.++.++++++...-.  .+||++||....  
T Consensus        96 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~  175 (296)
T 3k31_A           96 DNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV  175 (296)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC
Confidence            87774       68999999994321               12345899999999999876533  489999997654  


Q ss_pred             CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHH
Q 015872          197 KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      ......|+.+|...+.+.+       ..|+++..++||.+...........- .....+....... .+...+|+|++++
T Consensus       176 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~-r~~~pedvA~~v~  253 (296)
T 3k31_A          176 VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFH-YILTWNKYNSPLR-RNTTLDDVGGAAL  253 (296)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHH-HHHHHHHHHSTTS-SCCCHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchH-HHHHHHHhcCCCC-CCCCHHHHHHHHH
Confidence            2345689999999998763       35899999999999865433221100 0000000000111 3677899999999


Q ss_pred             HHHhCC--ccCCcEEEEcCCCCC
Q 015872          270 VALRNE--KINGRTLTFSGPRAW  290 (399)
Q Consensus       270 ~~l~~~--~~~g~~~~l~~~~~~  290 (399)
                      .++.+.  ...|+++++.||..+
T Consensus       254 fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          254 YLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHcCCccCCccCCEEEECCCccc
Confidence            999763  346899999998654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.82  E-value=7.4e-20  Score=166.02  Aligned_cols=203  Identities=17%  Similarity=0.101  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccC--CCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADL--SKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl--~d~~~l~~~~~----  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++....   +.   ...+.++.+|+  +|.+++.++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999975432221   11   12678999999  88877776664    


Q ss_pred             ---CCCEEEECCCCC-CC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 ---GVHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ---~~d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                         ++|+|||+||.. ..           +..+++|+.++.++++++    ++.+..+||++||....  ..+...|+.+
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS  168 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence               699999999942 11           123468999999888887    45566799999997653  3345679999


Q ss_pred             HHHHHHHHH----hC--CCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          207 KYCTEQFLQ----DS--GLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       207 K~~~E~~l~----~~--g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      |...+.+.+    +.  .+++..+.||.+..+......    ..        .....+.+.+|+|++++.++.++.  ..
T Consensus       169 K~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~----~~--------~~~~~~~~p~dva~~~~~L~s~~~~~it  236 (252)
T 3f1l_A          169 KFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAF----PT--------EDPQKLKTPADIMPLYLWLMGDDSRRKT  236 (252)
T ss_dssp             HHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHC----TT--------CCGGGSBCTGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhC----Cc--------cchhccCCHHHHHHHHHHHcCccccCCC
Confidence            999998763    22  388999999988765432211    10        111146778999999999997643  46


Q ss_pred             CcEEEEcCCCCCCHHH
Q 015872          279 GRTLTFSGPRAWTTQE  294 (399)
Q Consensus       279 g~~~~l~~~~~~s~~e  294 (399)
                      |+++++.||...++.|
T Consensus       237 G~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          237 GMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             SCEEESSCC-------
T ss_pred             CCEEEeCCCcCCCCCC
Confidence            8999999998766543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.82  E-value=1.3e-19  Score=165.72  Aligned_cols=188  Identities=14%  Similarity=0.113  Sum_probs=143.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      .+++|+|+||||+|+||.+++++|+++|   ++|++++|+..+.. .+.     ..++.++.+|++|.+++.++++    
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            4557899999999999999999999999   99999999865432 121     1368899999999999988876    


Q ss_pred             -----CCCEEEECCCCCC-CC-----------cchhccHHHHHHHHHHHHHc----------C-----CcEEEEecccCC
Q 015872          148 -----GVHTVIDCATGRP-EE-----------PIKKVDWEGKVALIQCAKAM----------G-----IQKYVFYSIHNC  195 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~-~~-----------~~~~~n~~~~~~l~~aa~~~----------~-----v~~~V~~Ss~~~  195 (399)
                           ++|+|||+||... ..           ...++|+.++.++++++...          +     ..+||++||...
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence                 7999999999443 11           13458899999988888544          2     468999999765


Q ss_pred             CCC-----CCCcHHHHHHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHH
Q 015872          196 DKH-----PEVPLMEIKYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD  263 (399)
Q Consensus       196 ~~~-----~~~~y~~~K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  263 (399)
                      ...     +...|+.+|...+.+.+.       .|++++++|||.+..+....                   ..+++.+|
T Consensus       177 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~~~~  237 (267)
T 1sny_A          177 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------SAPLDVPT  237 (267)
T ss_dssp             CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------TCSBCHHH
T ss_pred             cccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------CCCCCHHH
Confidence            432     456899999999987632       58999999999887554211                   13567899


Q ss_pred             HHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          264 IARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       264 va~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                      +|+.++.++.+.  ...|..+++.|+
T Consensus       238 ~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          238 STGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             HHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             HHHHHHHHHHhcCcCCCCcEEccCCc
Confidence            999999999864  335777666554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=3.2e-20  Score=170.99  Aligned_cols=192  Identities=16%  Similarity=0.130  Sum_probs=137.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc----CCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD----WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~----~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+..+...   .+..    ..+.++.+|++|++++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999999997433221   1111    236789999999998887775      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHH----HHHHHHHHHHcCC--cEEEEecccCCCC----CCCCcHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEG----KVALIQCAKAMGI--QKYVFYSIHNCDK----HPEVPLME  205 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~----~~~l~~aa~~~~v--~~~V~~Ss~~~~~----~~~~~y~~  205 (399)
                       ++|+|||+||.....           ..+++|+.+    ++++++.+++.++  .+||++||.....    .+...|+.
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  189 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  189 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHH
Confidence             799999999943221           234578888    7778888888876  7999999987652    23356999


Q ss_pred             HHHHHHHHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          206 IKYCTEQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       206 ~K~~~E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +|...+.+.+         ..++++++++||.+..++.........  ......  .....+++++|+|++++.++..+.
T Consensus       190 sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~--~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          190 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAAT--YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHH--HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhh--cccccCCCHHHHHHHHHHHhcCCc
Confidence            9999987652         468999999999988665321111000  000000  011247899999999999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.82  E-value=2.5e-19  Score=162.27  Aligned_cols=200  Identities=15%  Similarity=0.126  Sum_probs=141.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a  156 (399)
                      ..+.|+|+||||+|+||.++++.|+++|++|++++|+.+ ..+.+  ..+.++ +|+  .+++.++++   ++|+|||+|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~--~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~A   89 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-LLKRS--GHRYVV-CDL--RKDLDLLFEKVKEVDILVLNA   89 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHT--CSEEEE-CCT--TTCHHHHHHHSCCCSEEEECC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhh--CCeEEE-eeH--HHHHHHHHHHhcCCCEEEECC
Confidence            456789999999999999999999999999999999742 11112  145566 999  555665554   899999999


Q ss_pred             CCCCCC-----------cchhccHHHHHH----HHHHHHHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH----
Q 015872          157 TGRPEE-----------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       157 ~~~~~~-----------~~~~~n~~~~~~----l~~aa~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~----  215 (399)
                      |.....           ...++|+.++.+    +++.+++.+..+||++||.....  .+...|+.+|...+.+.+    
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  169 (249)
T 1o5i_A           90 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSF  169 (249)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            943321           223577777655    45556667778999999987653  344679999999997763    


Q ss_pred             ---hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 ---DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 ---~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                         ..|+++++++||.+.++............  .+....... .+++++|+|++++.++.++.  ..|++|++.|+.
T Consensus       170 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~p~~-~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          170 EVAPYGITVNCVAPGWTETERVKELLSEEKKK--QVESQIPMR-RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHGGGTEEEEEEEECSBCCTTHHHHSCHHHHH--HHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhhhcCeEEEEEeeCCCccCcccccchhhHHH--HHHhcCCCC-CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence               36899999999999876543211111000  010000111 47899999999999987643  358999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.82  E-value=2.2e-20  Score=170.84  Aligned_cols=206  Identities=12%  Similarity=0.070  Sum_probs=148.1

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+|+||||+  |+||.++++.|+++|++|++++|+. +..+.   +..  .+..++++|++|++++.++++      
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            456889999999  9999999999999999999999975 22111   111  135789999999998887775      


Q ss_pred             -CCCEEEECCCCCCC----------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 -GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~----------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                       ++|+|||+||....                +...++|+.++.++++++...-  -.+||++||....  ..+...|+.+
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  165 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  165 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHH
Confidence             68999999994321                1134689999999999997652  2489999997653  2345679999


Q ss_pred             HHHHHHHHHh-------CCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          207 KYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       207 K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      |...+.+.+.       .|+++++++||.+.++......  .....   .+....... .+.+++|+|++++.++.++. 
T Consensus       166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~p~~-~~~~~~dva~~v~~l~s~~~~  241 (265)
T 1qsg_A          166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLA---HCEAVTPIR-RTVTIEDVGNSAAFLCSDLSA  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHH---HHHHHSTTS-SCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHH---HHHhcCCCC-CCCCHHHHHHHHHHHhCchhc
Confidence            9999987642       4899999999999876432211  00000   000000111 46789999999999987643 


Q ss_pred             -cCCcEEEEcCCCCCC
Q 015872          277 -INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 -~~g~~~~l~~~~~~s  291 (399)
                       ..|++|++.++..++
T Consensus       242 ~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          242 GISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CccCCEEEECCCcCCC
Confidence             368899999986443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.82  E-value=9.7e-20  Score=165.57  Aligned_cols=207  Identities=12%  Similarity=0.160  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccc---c--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFL---R--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l---~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ....|+||||||+|+||.+++++|+++|++|+++++..... ...+   .  ..++.++++|++|.+++.++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            34568999999999999999999999999999998443332 2111   1  1358899999999988877775      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||....           +..+++|+.++.++++++    ++.+..+||++||....  ..+...|+.+|..
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  169 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHH
Confidence             68999999994321           123468999977776655    55677799999997653  3445789999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      .+.+.+       ..|+++..++||.+..+............  +.. ..... .+.+.+|+|++++.++..+  ...|+
T Consensus       170 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~-~~~~~-~~~~~~dva~~~~~l~s~~~~~~tG~  245 (256)
T 3ezl_A          170 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK--IVA-TIPVR-RLGSPDEIGSIVAWLASEESGFSTGA  245 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH--HHH-HSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHH--HHh-cCCCC-CCcCHHHHHHHHHHHhCCcccCCcCc
Confidence            987763       26899999999999866543321111110  000 00111 4678899999999998653  34689


Q ss_pred             EEEEcCCCCC
Q 015872          281 TLTFSGPRAW  290 (399)
Q Consensus       281 ~~~l~~~~~~  290 (399)
                      ++++.||..+
T Consensus       246 ~i~vdgG~~~  255 (256)
T 3ezl_A          246 DFSLNGGLHM  255 (256)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECCCEeC
Confidence            9999998543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.82  E-value=3.6e-20  Score=169.17  Aligned_cols=206  Identities=18%  Similarity=0.144  Sum_probs=149.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++|+.++..+....  .++.++++|++|++++.++++       .+|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5568999999999999999999999999999999985432221111  357889999999988877765       5799


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCCC-CCCcHHHHHHHHHHHHH--
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDKH-PEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~-~~~~y~~~K~~~E~~l~--  215 (399)
                      |||+||....           +...++|+.++.++++++...-  ..+||++||...... +...|+.+|...+.+.+  
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~~l  163 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL  163 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCcHHHHHHHHHHHHHHHHH
Confidence            9999983221           2234689999999999987653  359999999877621 23469999998887653  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                           ..|+++++++||.+.++....+......  .+ ....... .+.+.+|+|++++.++.++.  ..|+++++.|+.
T Consensus       164 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~-~~~~p~~-~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  239 (263)
T 2a4k_A          164 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE--QE-VGASPLG-RAGRPEEVAQAALFLLSEESAYITGQALYVDGGR  239 (263)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH--HH-HHTSTTC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHH--HH-HhcCCCC-CCcCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence                 3689999999999987654332111000  00 0000111 47889999999999997643  468999999885


Q ss_pred             CC
Q 015872          289 AW  290 (399)
Q Consensus       289 ~~  290 (399)
                      .+
T Consensus       240 ~~  241 (263)
T 2a4k_A          240 SI  241 (263)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.82  E-value=4.4e-20  Score=169.44  Aligned_cols=203  Identities=17%  Similarity=0.150  Sum_probs=139.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----ccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +++|+||||+|+||.+++++|+++|++|+++.+...+..+.    +..  .++.++++|++|.+++.++++       ++
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  105 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL  105 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999998874432322111    111  257889999999988877765       68


Q ss_pred             CEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHc-------CCcEEEEecccCCCC--C-CCCcHHHHH
Q 015872          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM-------GIQKYVFYSIHNCDK--H-PEVPLMEIK  207 (399)
Q Consensus       150 d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~-------~v~~~V~~Ss~~~~~--~-~~~~y~~~K  207 (399)
                      |+|||+||....            ...+++|+.++.++++++...       +..+||++||.....  . ....|+.+|
T Consensus       106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  185 (272)
T 4e3z_A          106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK  185 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence            999999994321            123468999999988887654       345899999976422  2 345699999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+       ..|++++.++||.+.++...........  ..+....... .+.+++|+|++++.++.++.  ..
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~-~~~~~edvA~~i~~l~s~~~~~~t  262 (272)
T 4e3z_A          186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRA--REMAPSVPMQ-RAGMPEEVADAILYLLSPSASYVT  262 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CCTTS-SCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHH--HHHhhcCCcC-CCcCHHHHHHHHHHHhCCcccccc
Confidence            99998763       2589999999999987654321111000  0011111111 46779999999999997643  46


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |++|++.||.
T Consensus       263 G~~i~vdgG~  272 (272)
T 4e3z_A          263 GSILNVSGGR  272 (272)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEeecCCC
Confidence            8999999873

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.82  E-value=9.6e-20  Score=165.97  Aligned_cols=211  Identities=15%  Similarity=0.167  Sum_probs=146.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|+++++...+...    .+.  ...+.++++|++|++++.++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999665333211    122  2258899999999998887775      


Q ss_pred             -CCCEEEECCCCC-CC-----------CcchhccHHHHHHHHHHHHHcCCc--EEEEecccCCC---CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNCD---KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss~~~~---~~~~~~y~~~K~~  209 (399)
                       ++|+|||+||.. ..           +..+++|+.++.++++++...-.+  +||++||....   ......|+.+|..
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  164 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGA  164 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHH
Confidence             789999999833 11           223468999999999999876433  89999997643   3445679999999


Q ss_pred             HHHHHH----h--CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          210 TEQFLQ----D--SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       210 ~E~~l~----~--~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                      .+.+.+    +  .++++..++||.+..++...+...-..  ..+......+ .+.+++|+|++++.++.++.  ..|++
T Consensus       165 ~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~p~~-r~~~pedva~~v~~L~s~~~~~itG~~  241 (259)
T 3edm_A          165 VMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVR--ERVAGATSLK-REGSSEDVAGLVAFLASDDAAYVTGAC  241 (259)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHH--HHHHhcCCCC-CCcCHHHHHHHHHHHcCccccCccCCE
Confidence            998763    2  238999999999886654332211110  0111111111 46789999999999987643  36899


Q ss_pred             EEEcCCCCCCHH
Q 015872          282 LTFSGPRAWTTQ  293 (399)
Q Consensus       282 ~~l~~~~~~s~~  293 (399)
                      |++.|+...+..
T Consensus       242 i~vdGg~~~~~~  253 (259)
T 3edm_A          242 YDINGGVLFSEG  253 (259)
T ss_dssp             EEESBCSSBC--
T ss_pred             EEECCCcCCCCC
Confidence            999998755443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.82  E-value=2.6e-19  Score=164.10  Aligned_cols=208  Identities=13%  Similarity=0.118  Sum_probs=150.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++++..+..+    .+..  .++.++++|++|++++.++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4667899999999999999999999999999998876433221    1211  357889999999988877765      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcCCc--EEEEecccCC---CCCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNC---DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss~~~---~~~~~~~y~~~K~~~  210 (399)
                       ++|++||+||....           +...++|+.++.++++++...-.+  +||++||...   ...+...|+.+|...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  174 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAV  174 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHH
Confidence             68999999994322           123468999999999999876544  9999999763   234456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcccc---------ccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---------SVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.+.+       ..|+++..++||.+..+.............         ..+......+ .+.+.+|+|++++.++.+
T Consensus       175 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~~L~s~  253 (270)
T 3is3_A          175 DSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH-RNGWPQDVANVVGFLVSK  253 (270)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTC-SCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCC
Confidence            98763       268999999999998665432211110000         0010001111 467899999999999975


Q ss_pred             Cc--cCCcEEEEcCCC
Q 015872          275 EK--INGRTLTFSGPR  288 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~  288 (399)
                      ..  ..|+++++.||.
T Consensus       254 ~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          254 EGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccCCccCcEEEeCCCC
Confidence            43  468999999874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=8.7e-20  Score=163.88  Aligned_cols=190  Identities=13%  Similarity=0.074  Sum_probs=141.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---------CCCEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---------GVHTV  152 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---------~~d~V  152 (399)
                      +.|+|+||||+|+||.+++++|+++|++|++++|+.++...     ...++.+|++|++++.++++         ++|+|
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            45789999999999999999999999999999998654321     35678899999988877664         78999


Q ss_pred             EECCCCCCC------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-
Q 015872          153 IDCATGRPE------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       153 i~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-  215 (399)
                      ||+||....            +...++|+.++.++++++...-  -.+||++||.....  .+...|+.+|...+.+.+ 
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  156 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSS  156 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHH
Confidence            999994321            1223589999999999887642  24899999986543  344679999999998763 


Q ss_pred             --------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC---ccCCcEEEE
Q 015872          216 --------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE---KINGRTLTF  284 (399)
Q Consensus       216 --------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~---~~~g~~~~l  284 (399)
                              ..|+++++++||.+.++......    ..        .....+++.+|+|++++.++..+   ...|+.+++
T Consensus       157 la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~----~~--------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v  224 (236)
T 1ooe_A          157 LAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----PN--------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  224 (236)
T ss_dssp             HHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----TT--------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHhcccCCCeEEEEEecCcccCcchhhcC----CC--------ccccccCCHHHHHHHHHHHHcCCCcccccccEEEE
Confidence                    23599999999998866433211    10        01124567899999999777443   235889998


Q ss_pred             cCCC
Q 015872          285 SGPR  288 (399)
Q Consensus       285 ~~~~  288 (399)
                      .++.
T Consensus       225 ~gg~  228 (236)
T 1ooe_A          225 TTEN  228 (236)
T ss_dssp             EEET
T ss_pred             ecCC
Confidence            8764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.82  E-value=4.4e-19  Score=162.63  Aligned_cols=204  Identities=16%  Similarity=0.138  Sum_probs=147.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+..+..+    .+.  ...+.++++|++|++++.++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999876433221    121  2257889999999998887775      


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC---CCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD---KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~  210 (399)
                       ++|+|||+||....           +...++|+.++.++++++...  +..+||++||....   ..+...|+.+|...
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  187 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAAL  187 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHH
Confidence             79999999994322           123468999999999998765  34599999886443   23456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRT  281 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~  281 (399)
                      +.+.+       ..|+++..++||.+..+....... ..   ..+....... .+...+|+|++++.++...  ...|++
T Consensus       188 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~---~~~~~~~~~~-r~~~pedvA~~v~fL~s~~~~~itG~~  262 (271)
T 3v2g_A          188 AGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-HA---EAQRERIATG-SYGEPQDIAGLVAWLAGPQGKFVTGAS  262 (271)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-SH---HHHHHTCTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-hH---HHHHhcCCCC-CCCCHHHHHHHHHHHhCcccCCccCCE
Confidence            98763       258999999999998654322100 00   0000000111 4678899999999998653  346899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +++.||.
T Consensus       263 i~vdGG~  269 (271)
T 3v2g_A          263 LTIDGGA  269 (271)
T ss_dssp             EEESTTT
T ss_pred             EEeCcCc
Confidence            9999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.82  E-value=1.2e-19  Score=166.03  Aligned_cols=203  Identities=15%  Similarity=0.143  Sum_probs=146.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|+++++.......    .+.  ..++.++.+|++|++++.++++      
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4566899999999999999999999999999887754332211    111  1368899999999998887775      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH-----HcCCcEEEEecccCC--CCCCCCcHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~-----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~  208 (399)
                       ++|+|||+||.....           ...++|+.++.++++++.     +.+..+||++||...  ...+...|+.+|.
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKA  182 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHH
Confidence             799999999943321           234689999999888873     455679999999754  3345578999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+       ..|+++..++||.+..+...... .....  ... ....+ .+.+++|+|++++.++.++.  ..|
T Consensus       183 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~--~~~-~~p~~-~~~~~edva~~~~~L~s~~~~~itG  257 (267)
T 4iiu_A          183 GIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEE-SALKE--AMS-MIPMK-RMGQAEEVAGLASYLMSDIAGYVTR  257 (267)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCH-HHHHH--HHH-TCTTC-SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccH-HHHHH--HHh-cCCCC-CCcCHHHHHHHHHHHhCCcccCccC
Confidence            8887653       35899999999999876543221 11100  000 00111 47789999999999997643  468


Q ss_pred             cEEEEcCC
Q 015872          280 RTLTFSGP  287 (399)
Q Consensus       280 ~~~~l~~~  287 (399)
                      +++++.||
T Consensus       258 ~~i~vdGG  265 (267)
T 4iiu_A          258 QVISINGG  265 (267)
T ss_dssp             CEEEESTT
T ss_pred             CEEEeCCC
Confidence            99999887

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.82  E-value=2.1e-19  Score=162.95  Aligned_cols=190  Identities=16%  Similarity=0.158  Sum_probs=144.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+..+..       ...+.+|++|.+++.++++       ++|+||
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34688999999999999999999999999999999855432       2467899999988877764       469999


Q ss_pred             ECCCCCCC------------CcchhccHHHHHHHHHHHHHcCC--cEEEEecccCCCC--CCCCcHHHHHHHHHHHHH--
Q 015872          154 DCATGRPE------------EPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       154 ~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~--  215 (399)
                      |+||....            ...+++|+.++.++++++...-.  .+||++||.....  .+...|+.+|...+.+.+  
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l  172 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDL  172 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            99994211            12345899999999999876532  3899999986543  344679999999998774  


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC---CccCCcEEEEc
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN---EKINGRTLTFS  285 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~---~~~~g~~~~l~  285 (399)
                             ..|+++.+++||.+.......+    ...       ... ..+++++|+|++++.++.+   ....|+++++.
T Consensus       173 a~e~~~~~~gi~v~~v~PG~v~t~~~~~~----~~~-------~~~-~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~  240 (251)
T 3orf_A          173 ASENGGLPAGSTSLGILPVTLDTPTNRKY----MSD-------ANF-DDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFE  240 (251)
T ss_dssp             TSTTSSSCTTCEEEEEEESCBCCHHHHHH----CTT-------SCG-GGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             HHHhcccCCCcEEEEEecCcCcCcchhhh----ccc-------ccc-cccCCHHHHHHHHHHHhcCccccCCcceEEEEe
Confidence                   2579999999999876543221    111       111 2578899999999999988   34578999998


Q ss_pred             CCCC
Q 015872          286 GPRA  289 (399)
Q Consensus       286 ~~~~  289 (399)
                      +++.
T Consensus       241 ~g~~  244 (251)
T 3orf_A          241 TKSK  244 (251)
T ss_dssp             EETT
T ss_pred             cCCc
Confidence            7654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.82  E-value=7.9e-20  Score=162.69  Aligned_cols=194  Identities=14%  Similarity=0.055  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~  157 (399)
                      ++.|+++||||+|+||.+++++|+++|++|++++|+..               +|++|++++.++++   ++|++||+||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            45688999999999999999999999999999999733               89999998888775   6899999999


Q ss_pred             CC-CCC-----------cchhccHHHHHHHHHHHHHcCC--cEEEEecccCCCC--CCCCcHHHHHHHHHHHHH----hC
Q 015872          158 GR-PEE-----------PIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ----DS  217 (399)
Q Consensus       158 ~~-~~~-----------~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~----~~  217 (399)
                      .. +..           ...++|+.++.++++++...-.  .++|++||.....  .+...|+.+|...+.+.+    +.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  148 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKEL  148 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            43 211           1245899999999999876532  3899999976543  345679999999998763    32


Q ss_pred             -CCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCC
Q 015872          218 -GLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAW  290 (399)
Q Consensus       218 -g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~  290 (399)
                       .+++..++||.+..+............. ..+......+ .+.+++|+|++++.++.+....|+++++.||..+
T Consensus       149 ~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          149 APIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG-KVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             TTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTC-SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             cCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCC-CccCHHHHHHHHHHHccCCCCCCcEEEecCCeec
Confidence             3999999999998765433221111000 0000000111 4778999999999999876668999999998654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.82  E-value=1.1e-19  Score=164.32  Aligned_cols=206  Identities=15%  Similarity=0.138  Sum_probs=148.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.+...+...  ..++.++++|++|++++.++++       ++|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            3567899999999999999999999999999999997543222211  2357889999999998887775       799


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHH----HHHcC-CcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQC----AKAMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~a----a~~~~-v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                      +|||+||..+..           ..+++|+.++.+++++    +++.+ ..+||++||...  .......|+.+|...+.
T Consensus        83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (247)
T 3rwb_A           83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence            999999943321           2346899998888877    45555 579999999754  23445689999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+       ..|+++..++||.+..+...........  .........+ .+.+.+|+|++++.++.++.  ..|++++
T Consensus       163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~-r~~~pedva~~v~~L~s~~~~~itG~~i~  239 (247)
T 3rwb_A          163 FTRALATELGKYNITANAVTPGLIESDGVKASPHNEAF--GFVEMLQAMK-GKGQPEHIADVVSFLASDDARWITGQTLN  239 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGH--HHHHHHSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHH--HHHhcccccC-CCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            763       2689999999999886543321111000  0000000111 35678999999999997643  4689999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||.
T Consensus       240 vdGG~  244 (247)
T 3rwb_A          240 VDAGM  244 (247)
T ss_dssp             ESTTS
T ss_pred             ECCCc
Confidence            99874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.81  E-value=5e-20  Score=167.46  Aligned_cols=214  Identities=15%  Similarity=0.060  Sum_probs=151.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+.+...+...  ..++.++++|++|++++.++++       ++|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            3556899999999999999999999999999999997543222111  1357899999999988876653       789


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      ++||+||.....           ...++|+.++.++++++...-  -.+||++||.....  .+...|+.+|...+.+.+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  164 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFAS  164 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH
Confidence            999999943221           234689999999999987642  24899999986543  345679999999998763


Q ss_pred             -------hCCCCEEEEecCcccccccccchh-h-hccc-cccccCCCCcceeceeHHHHHHHHHHHHhC-CccCCcEEEE
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAV-P-ILEE-KSVWGTDALTRIAYMDTQDIARLTFVALRN-EKINGRTLTF  284 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~-~~~~g~~~~l  284 (399)
                             ..|+++..++||.+..+....... . .... ...+......+ .+.+.+|+|++++.++.+ ....|+++++
T Consensus       165 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~itG~~i~v  243 (255)
T 4eso_A          165 VLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK-RNGTADEVARAVLFLAFEATFTTGAKLAV  243 (255)
T ss_dssp             HHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTS-SCBCHHHHHHHHHHHHHTCTTCCSCEEEE
T ss_pred             HHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCC-CCcCHHHHHHHHHHHcCcCcCccCCEEEE
Confidence                   258999999999998654321100 0 0000 00000000111 467889999999998875 2346899999


Q ss_pred             cCCCCCCHHH
Q 015872          285 SGPRAWTTQE  294 (399)
Q Consensus       285 ~~~~~~s~~e  294 (399)
                      .||...++.+
T Consensus       244 dGG~~~~l~~  253 (255)
T 4eso_A          244 DGGLGQKLST  253 (255)
T ss_dssp             STTTTTTBCC
T ss_pred             CCCccccCcC
Confidence            9987665543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.81  E-value=2.4e-19  Score=166.96  Aligned_cols=195  Identities=16%  Similarity=0.104  Sum_probs=138.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      +..|+|+||||+|+||.+++++|+++|++|++++|+.++....   +.  ..++.++++|++|.+++.++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            5568999999999999999999999999999999975432221   21  2357889999999998887775       7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +|+|||+||....           ....++|+.++.++++++.    +.+ ..+||++||.....  .....|+.+|...
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  188 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV  188 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHH
Confidence            9999999994322           1234689999999888864    334 46999999986543  3346799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcc-----cc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE-----EK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+       ..|+++++++||.+..++..........     ..  ..++.. .....+++++|+|++++.+++++.
T Consensus       189 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          189 VGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPL-PTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhcccc-ccccCCCCHHHHHHHHHHHHhcCC
Confidence            87753       3589999999999986654332111000     00  111111 122368999999999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.81  E-value=2e-19  Score=166.21  Aligned_cols=210  Identities=14%  Similarity=0.123  Sum_probs=150.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc--------c-------ccc--cCCcEEEEccCCCCCcH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--------D-------FLR--DWGATVVNADLSKPETI  142 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~--------~-------~l~--~~~v~~~~~Dl~d~~~l  142 (399)
                      .++.|+||||||+|+||.+++++|+++|++|++++|+.....        .       .+.  ..++.++++|++|++++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            456789999999999999999999999999999998732211        0       011  12578899999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC---------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC-------
Q 015872          143 PATLV-------GVHTVIDCATGRPE---------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK-------  197 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~---------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~-------  197 (399)
                      .++++       ++|+|||+||....         +..+++|+.++.++++++...-  -.+||++||.....       
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence            77765       79999999994321         1234689999999999997753  34899999975321       


Q ss_pred             ------CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccch-----hhhcccc-------ccccCCC
Q 015872          198 ------HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA-----VPILEEK-------SVWGTDA  252 (399)
Q Consensus       198 ------~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~  252 (399)
                            .+...|+.+|...+.+.+       ..|+++..++||.+..+......     .+.....       ...... 
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  245 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ-  245 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGC-
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhc-
Confidence                  223469999999998763       24899999999999876543211     0000000       000111 


Q ss_pred             CcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCCCC
Q 015872          253 LTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPRAW  290 (399)
Q Consensus       253 ~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~~  290 (399)
                      .....+.+++|+|++++.++.+.  ...|+++++.||..+
T Consensus       246 ~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            11136889999999999999654  346899999998643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.81  E-value=1.9e-20  Score=171.69  Aligned_cols=183  Identities=15%  Similarity=0.035  Sum_probs=139.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           82 RPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++|+|+||||+|+||.++++.|++ .|++|++++|+.++...   .+.  ..++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999 99999999997433221   111  1358899999999998888776       7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcCC--cEEEEecccCCC-------------------
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCD-------------------  196 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~-------------------  196 (399)
                      +|+|||+||....           +...++|+.++.++++++.....  .+||++||....                   
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            9999999983311           12356899999999999987632  499999996432                   


Q ss_pred             ------------------------CCCCCcHHHHHHHHHHHHH-------h----CCCCEEEEecCcccccccccchhhh
Q 015872          197 ------------------------KHPEVPLMEIKYCTEQFLQ-------D----SGLPHVIIRLCGFMQGLIGQYAVPI  241 (399)
Q Consensus       197 ------------------------~~~~~~y~~~K~~~E~~l~-------~----~g~~~~ilRp~~~~~~~~~~~~~~~  241 (399)
                                              ..|...|+.+|...+.+.+       .    .|+++++++||.+..+....     
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-----  237 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-----  237 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence                                    1244789999999987763       2    58999999999887554221     


Q ss_pred             ccccccccCCCCcceeceeHHHHHHHHHHHHhCCc----cCCcEEE
Q 015872          242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK----INGRTLT  283 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~----~~g~~~~  283 (399)
                                    ..+.+.+|+|++++.++..+.    ..|+.|.
T Consensus       238 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 --------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             --------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             --------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                          146788999999999997542    3566665

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.81  E-value=5.8e-19  Score=161.39  Aligned_cols=207  Identities=12%  Similarity=0.081  Sum_probs=149.0

Q ss_pred             CCCCCeEEEEcCCCh--hHHHHHHHHHHCCCcEEEEecCCCCCc--ccc----ccCCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPRPAPA--DFL----RDWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~l----~~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      +++.|+|+||||+|+  ||.++++.|+++|++|++++|+.....  ..+    ...++.++++|++|++++.++++    
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            456789999999988  999999999999999999999742111  111    11268999999999998887764    


Q ss_pred             ---CCCEEEECCCCCC----CC-----------cchhccHHHHHHHHHHHHHcCC--cEEEEecccCCCC--CCCCcHHH
Q 015872          148 ---GVHTVIDCATGRP----EE-----------PIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCDK--HPEVPLME  205 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~----~~-----------~~~~~n~~~~~~l~~aa~~~~v--~~~V~~Ss~~~~~--~~~~~y~~  205 (399)
                         .+|+|||+||...    ..           ...++|+.++.++++++...-.  .+||++||.....  .....|+.
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  163 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGV  163 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHH
Confidence               6899999998432    11           1235788999999999876532  4899999976543  33467999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +|...+.+.+       ..|+++..++||.+..........  ....   .+....... .+.+.+|+|++++.++.++.
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~-~~~~p~dva~~v~~l~s~~~  239 (266)
T 3oig_A          164 AKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILK---DIEERAPLR-RTTTPEEVGDTAAFLFSDMS  239 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHH---HHHHHSTTS-SCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHH---HHHhcCCCC-CCCCHHHHHHHHHHHcCCch
Confidence            9999998763       358999999999998654332211  0000   000000111 46788999999999998643


Q ss_pred             --cCCcEEEEcCCCCC
Q 015872          277 --INGRTLTFSGPRAW  290 (399)
Q Consensus       277 --~~g~~~~l~~~~~~  290 (399)
                        ..|+++++.||...
T Consensus       240 ~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          240 RGITGENLHVDSGFHI  255 (266)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             hcCcCCEEEECCCeEE
Confidence              46899999987543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.81  E-value=1.6e-19  Score=166.79  Aligned_cols=204  Identities=12%  Similarity=0.031  Sum_probs=146.4

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCC--Ccccccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~--~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+  |+||.++++.|+++|++|++++|+...  ..+.+..  .++.++++|++|++++.++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            556899999999  999999999999999999999997530  1111111  247889999999988877765       


Q ss_pred             CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcCC---cEEEEecccCCC--CCCCCcHHHHH
Q 015872          148 GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~v---~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                      ++|+|||+||....               +...++|+.++.++++++...-.   .+||++||....  ..+...|+.+|
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  178 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAK  178 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHH
Confidence            68999999994321               12346899999999999876533   699999997653  23456799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      ...+.+.+       ..|+++++++||.+.++......  .....   .+....... .+.+++|+|++++.++.++.  
T Consensus       179 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~p~~-~~~~~~dva~~~~~l~s~~~~~  254 (285)
T 2p91_A          179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLME---HTTKVNPFG-KPITIEDVGDTAVFLCSDWARA  254 (285)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHH---HHHHHSTTS-SCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHH---HHHhcCCCC-CCcCHHHHHHHHHHHcCCcccC
Confidence            99998763       25899999999999875432211  00000   000000111 36789999999999987533  


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|++|++.++.
T Consensus       255 ~tG~~~~vdgg~  266 (285)
T 2p91_A          255 ITGEVVHVDNGY  266 (285)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CCCCEEEECCCc
Confidence            368899999874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.81  E-value=1.1e-19  Score=164.72  Aligned_cols=197  Identities=9%  Similarity=0.065  Sum_probs=141.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-------c-CCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------D-WGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-------~-~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+.++......       . .++.++++|++|.+++.++++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999997543221111       1 468899999999988877764    


Q ss_pred             ---CCCEEEECCCCCCC----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 ---GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                         ++|+|||+||....          ....++|+.++..+++++    ++.+..+||++||....  ..+...|+.+|.
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  163 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKF  163 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHH
Confidence               68999999994322          123468999988888877    44566799999997654  345678999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc---C
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI---N  278 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~---~  278 (399)
                      ..+.+.+       ..|+++..++||.+..+.......    .       ... ..+++.+|+|++++.++..+..   .
T Consensus       164 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~-------~~~-~~~~~p~dva~~v~~l~s~~~~~~~~  231 (250)
T 3nyw_A          164 ALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT----P-------FKD-EEMIQPDDLLNTIRCLLNLSENVCIK  231 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC----C-------SCG-GGSBCHHHHHHHHHHHHTSCTTEECC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC----C-------ccc-ccCCCHHHHHHHHHHHHcCCCceEee
Confidence            9988763       258999999999987654332110    0       011 1478899999999999987542   2


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      +-++.+.+++
T Consensus       232 ~~~i~vd~~~  241 (250)
T 3nyw_A          232 DIVFEMKKSI  241 (250)
T ss_dssp             EEEEEEHHHH
T ss_pred             EEEEEeeccc
Confidence            3455665544

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.81  E-value=3.8e-19  Score=167.49  Aligned_cols=204  Identities=15%  Similarity=0.046  Sum_probs=146.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEe-cCCCCCcc---ccc---cCCcEEEEccCCCCC-------------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPAD---FLR---DWGATVVNADLSKPE-------------  140 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~-r~~~~~~~---~l~---~~~v~~~~~Dl~d~~-------------  140 (399)
                      ++.|+|+||||+|+||.++++.|+++|++|++++ |+.+....   .+.   ..++.++++|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5568999999999999999999999999999999 86432211   111   235889999999999             


Q ss_pred             ----cHHHHhc-------CCCEEEECCCCCCCC-------------------------cchhccHHHHHHHHHHHH----
Q 015872          141 ----TIPATLV-------GVHTVIDCATGRPEE-------------------------PIKKVDWEGKVALIQCAK----  180 (399)
Q Consensus       141 ----~l~~~~~-------~~d~Vi~~a~~~~~~-------------------------~~~~~n~~~~~~l~~aa~----  180 (399)
                          ++.++++       ++|+|||+||.....                         ..+++|+.++.++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8877765       799999999832111                         124678889888888775    


Q ss_pred             HcC------CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc
Q 015872          181 AMG------IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK  245 (399)
Q Consensus       181 ~~~------v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~  245 (399)
                      +.+      ..+||++||.....  .+...|+.+|..++.+.+       ..|+++++|+||.+..+. ..+ .....  
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-~~~~~--  279 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-PAVWE--  279 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-HHHHH--
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-HHHHH--
Confidence            334      57999999987643  345679999999998763       258999999999998665 221 11100  


Q ss_pred             ccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCCC
Q 015872          246 SVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       246 ~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      .+...-+.. ..+.+.+|+|++++.++..+  ...|+++++.|+..
T Consensus       280 ~~~~~~p~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          280 GHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             HHHTTCTTT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhCCCC-CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            000000011 03678899999999999753  34689999998754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=9.5e-20  Score=167.20  Aligned_cols=183  Identities=11%  Similarity=0.035  Sum_probs=136.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.......   +.  ..++.++.+|++|++++.++++       
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            45678999999999999999999999999999999974332211   11  1258899999999988877765       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCCC--CCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH--PEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~~--~~~~y~~~K~~~  210 (399)
                      ++|+|||+||.....           ...++|+.++.++++++    ++.+..+||++||......  +...|+.+|...
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  187 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  187 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence            789999999943321           23458888877766655    4567789999999876532  235699999999


Q ss_pred             HHHHH----------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQ----------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~----------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+          ..|+++++++||.+.++....        ..      .....+++.+|+|++++.++.++.
T Consensus       188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--------~~------~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--------PS------TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------TH------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--------cc------ccccCCCCHHHHHHHHHHHHHcCC
Confidence            98763          238999999999887654221        00      001257889999999999998764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.81  E-value=2e-19  Score=164.93  Aligned_cols=193  Identities=13%  Similarity=0.086  Sum_probs=131.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .+++|+|+||||+|+||.+++++|+++|++|++++|+.+...+....  .++.++++|++|++++.++++       ++|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            34568899999999999999999999999999999975432222111  368899999999998887775       799


Q ss_pred             EEEECCCCCCC------------CcchhccHHHHHHHHHHHHH----cC--CcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          151 TVIDCATGRPE------------EPIKKVDWEGKVALIQCAKA----MG--IQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       151 ~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~----~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      +|||+||....            +..+++|+.++.++++++..    .+  -.+||++||.....  .+...|+.+|...
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            99999994321            12346899998777776643    33  35999999986543  3456799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      +.+.+       ..|+++..++||.+..+....+......   ...  ......+.+++|+|++++.++.++..
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---~~~--~~~~~~~~~pedvA~~v~fL~s~~~~  253 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ---ADL--SIKVEPVMDVAHVASAVVYMASLPLD  253 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------CHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchh---hhh--cccccCCCCHHHHHHHHHHHhCCCCc
Confidence            98763       2689999999998886554332111100   000  01112578999999999999997653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.81  E-value=4.1e-19  Score=159.97  Aligned_cols=190  Identities=13%  Similarity=0.039  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---------CCCEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---------GVHTV  152 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---------~~d~V  152 (399)
                      ++|+|+||||+|+||.+++++|+++|++|++++|+.++...     ...++++|++|++++.++++         ++|+|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            35789999999999999999999999999999998554321     35678899999988877764         68999


Q ss_pred             EECCCCCCCC------------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-
Q 015872          153 IDCATGRPEE------------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       153 i~~a~~~~~~------------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-  215 (399)
                      ||+||.....            ...++|+.++.++++++...-  -.+||++||.....  .+...|+.+|...+.+.+ 
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  160 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  160 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHH
Confidence            9999943211            123589999999999887642  24899999986543  344679999999998764 


Q ss_pred             --------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          216 --------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       216 --------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                              ..|+++++++||.+..+......    ..        .....++..+|+|++++.++.++.  ..|+.+.+.
T Consensus       161 la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~----~~--------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          161 LAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM----PE--------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             HTSTTSSCCTTCEEEEEEESCEECHHHHHHS----TT--------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             HHHHhccCCCCeEEEEEecCcccCccccccC----cc--------hhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence                    34699999999988755432211    10        111246778999999999997643  358899887


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      +++
T Consensus       229 g~~  231 (241)
T 1dhr_A          229 TTD  231 (241)
T ss_dssp             EET
T ss_pred             CCC
Confidence            754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.81  E-value=2.8e-19  Score=162.13  Aligned_cols=192  Identities=14%  Similarity=0.078  Sum_probs=130.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      ++++|+|+||||+|+||.++++.|+++|++|++++|+.++....   +..  .++.++++|++|++++.++++      +
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            45568999999999999999999999999999999985543222   111  257889999999999888876      6


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      +|++||+||.....           ...++|+.++.++++++    ++.+..+||++||....  ......|+.+|...+
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  163 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLR  163 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHH
Confidence            89999999943321           22468888888877766    44566799999997653  234567999999999


Q ss_pred             HHHH-------hCCCCE-EEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFLQ-------DSGLPH-VIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l~-------~~g~~~-~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+       ..|+++ .++.||.+..+...........   .+..  .....+.+.+|+|++++.++.++.
T Consensus       164 ~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~---~~~~--~~~~~~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          164 AVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFG---KDAL--ANPDLLMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC--------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhh---hhhh--cCCccCCCHHHHHHHHHHHHhCch
Confidence            7763       258999 8999998876554332111110   0111  112238899999999999998654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.80  E-value=4.5e-19  Score=160.33  Aligned_cols=192  Identities=17%  Similarity=0.171  Sum_probs=137.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.|+++||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.++++       +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999997443221   111  2257889999999988877764       7


Q ss_pred             CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      +|+|||+||....           ....++|+.++.++++++.    +.+ .+||++||.....  .....|+.+|...+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVN  163 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHH
Confidence            9999999994321           1234689999988888774    345 7999999976543  34467999999998


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+       ..|+++++++||.+..+...........  ..+...+ .++.+++.+|+|++++.++.++.
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATK--EMYEQRI-SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHH--HHHHHHT-TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhH--HHHHhcc-cccCCCCHHHHHHHHHHHhCCCc
Confidence            7653       3689999999999986654322111000  0000000 12235899999999999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.80  E-value=1e-19  Score=170.85  Aligned_cols=197  Identities=12%  Similarity=0.008  Sum_probs=133.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc---cc----CCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD----WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l---~~----~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+++++||||||+|+||.+++++|+++|++|++++|+.++.....   ..    ..+.++.+|++|++++.++++     
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999854322211   11    157889999999998887775     


Q ss_pred             --CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC----------CcEEEEecccCCCC--CCCCc
Q 015872          148 --GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG----------IQKYVFYSIHNCDK--HPEVP  202 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~----------v~~~V~~Ss~~~~~--~~~~~  202 (399)
                        ++|+|||+||....           ....++|+.|+.++++++....          ..+||++||.....  .....
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~  164 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGI  164 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHH
Confidence              67999999994322           1234689999999888876442          34799999987643  23457


Q ss_pred             HHHHHHHHHHHH-------HhCCCCEEEEecCcccccccccchh--hhcccc------ccccCCCCcceeceeHHHHHHH
Q 015872          203 LMEIKYCTEQFL-------QDSGLPHVIIRLCGFMQGLIGQYAV--PILEEK------SVWGTDALTRIAYMDTQDIARL  267 (399)
Q Consensus       203 y~~~K~~~E~~l-------~~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~v~v~Dva~~  267 (399)
                      |+.+|..++.+.       ...|+++++++||.+.+++......  ..+.+.      .....-.......++++|+|++
T Consensus       165 Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~  244 (319)
T 3ioy_A          165 YNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGAR  244 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHH
Confidence            999999776654       2368999999999998655432110  001100      0000000111123799999999


Q ss_pred             HHHHHhCCc
Q 015872          268 TFVALRNEK  276 (399)
Q Consensus       268 i~~~l~~~~  276 (399)
                      ++.+++++.
T Consensus       245 ~~~al~~~~  253 (319)
T 3ioy_A          245 VIEAMKANR  253 (319)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999999754

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.80  E-value=7.3e-19  Score=163.53  Aligned_cols=208  Identities=14%  Similarity=0.135  Sum_probs=148.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--------c-------cccc--cCCcEEEEccCCCCCcH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--------A-------DFLR--DWGATVVNADLSKPETI  142 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--------~-------~~l~--~~~v~~~~~Dl~d~~~l  142 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++|+....        .       ..+.  ...+.++++|++|++++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            45678999999999999999999999999999999973211        0       0111  12578899999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHHHc-----CCcEEEEecccCCC--
Q 015872          143 PATLV-------GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNCD--  196 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~~~-----~v~~~V~~Ss~~~~--  196 (399)
                      .++++       ++|+|||+||....            +..+++|+.++.++++++...     +..+||++||....  
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence            77765       79999999993221            123468999999988887543     35699999998654  


Q ss_pred             CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchh-hhc----cccc--------cccCCCCcce
Q 015872          197 KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PIL----EEKS--------VWGTDALTRI  256 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~----~~~~--------~~~~~~~~~~  256 (399)
                      ......|+.+|..++.+.+       ..|+++..++||.+..+....... ...    ....        ....  ....
T Consensus       185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~  262 (299)
T 3t7c_A          185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH--VLPI  262 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS--SSSC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc--ccCc
Confidence            3345679999999998763       258999999999998665432110 000    0000        0000  1112


Q ss_pred             eceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCCC
Q 015872          257 AYMDTQDIARLTFVALRNEK--INGRTLTFSGPRA  289 (399)
Q Consensus       257 ~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~  289 (399)
                      .+.+.+|+|++++.++.++.  ..|+++++.||..
T Consensus       263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            57889999999999997643  4689999999854

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.80  E-value=8.2e-20  Score=167.35  Aligned_cols=214  Identities=11%  Similarity=0.038  Sum_probs=150.9

Q ss_pred             CCCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcHHHHhc----
Q 015872           79 TPVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      .....|+|+||||+  |+||.+++++|+++|++|++++|+.. ..+.+.     ..++.++++|++|++++.++++    
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34567899999999  99999999999999999999999732 211111     1247899999999998887775    


Q ss_pred             ---CCCEEEECCCCCCC----------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHH
Q 015872          148 ---GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLM  204 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~----------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~  204 (399)
                         ++|+|||+||....                ....++|+.++.++++++...-  ..+||++||....  ......|+
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  168 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMG  168 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHH
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchh
Confidence               68999999994321                1123588999999999987652  2489999987653  33457899


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .+|...+.+.+       ..|+++..++||.+..+.......  ....   .+....... .+.+.+|+|++++.++.+.
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~-~~~~pedva~~i~~l~s~~  244 (271)
T 3ek2_A          169 LAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILD---FVESNSPLK-RNVTIEQVGNAGAFLLSDL  244 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHH---HHHHHSTTS-SCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHH---HHHhcCCcC-CCCCHHHHHHHHHHHcCcc
Confidence            99999998763       368999999999998655432211  0000   000000111 4678899999999999763


Q ss_pred             --ccCCcEEEEcCCCCCCHHHHHH
Q 015872          276 --KINGRTLTFSGPRAWTTQEVIT  297 (399)
Q Consensus       276 --~~~g~~~~l~~~~~~s~~e~~~  297 (399)
                        ...|+++++.||..+++.++++
T Consensus       245 ~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          245 ASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             GTTCCSEEEEESTTGGGBCCCC--
T ss_pred             cCCeeeeEEEECCCeeeehhhhhh
Confidence              3478999999998777666544

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.80  E-value=2.1e-18  Score=159.45  Aligned_cols=211  Identities=14%  Similarity=0.151  Sum_probs=149.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc------------c-------ccc--cCCcEEEEccCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------------D-------FLR--DWGATVVNADLSK  138 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~------------~-------~l~--~~~v~~~~~Dl~d  138 (399)
                      .++.|+++||||+|.||.++++.|+++|++|++++|+.+...            +       .+.  ...+.++++|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            456789999999999999999999999999999999732110            0       111  1257889999999


Q ss_pred             CCcHHHHhc-------CCCEEEECCCCCCCC------------cchhccHHHHHHHHHHHHHc----C-CcEEEEecccC
Q 015872          139 PETIPATLV-------GVHTVIDCATGRPEE------------PIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHN  194 (399)
Q Consensus       139 ~~~l~~~~~-------~~d~Vi~~a~~~~~~------------~~~~~n~~~~~~l~~aa~~~----~-v~~~V~~Ss~~  194 (399)
                      ++++.++++       ++|+|||+||.....            ..+++|+.++.++++++...    + -.+||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            998887765       799999999943221            13468999998888877543    3 45899999976


Q ss_pred             CCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccch-hhhc----ccc------ccccCCCCc
Q 015872          195 CDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA-VPIL----EEK------SVWGTDALT  254 (399)
Q Consensus       195 ~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~-~~~~----~~~------~~~~~~~~~  254 (399)
                      ...  .....|+.+|..++.+.+       ..|+++..++||.+..+...... ....    ...      .........
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T 3uve_A          168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL  247 (286)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSS
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhcc
Confidence            543  344679999999998763       26899999999999866543210 0000    000      000000011


Q ss_pred             ceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCCCC
Q 015872          255 RIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPRAW  290 (399)
Q Consensus       255 ~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~~  290 (399)
                      ...+.+.+|+|++++.++.++.  ..|+++++.||..+
T Consensus       248 p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            1357899999999999997643  46899999998543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.80  E-value=6e-19  Score=158.24  Aligned_cols=195  Identities=14%  Similarity=0.072  Sum_probs=140.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c---ccCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L---RDWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l---~~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +|+|+||||+|+||.+++++|+++|++|++++|+.++....   +   ....+.++++|++|++++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999975432211   1   12368889999999998888775       78


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc---CCcEEEEecccCC-CC-CCCCcHHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC-DK-HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~-~~-~~~~~y~~~K~~~E~~  213 (399)
                      |+|||+||.....           ...++|+.++.++++++...   +..++|++||... .. .....|+.+|...+.+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~  161 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARAL  161 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHH
Confidence            9999999943221           23468999999988887542   2346666665543 32 2345799999999987


Q ss_pred             HHh-----CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc--CCcEEEEcC
Q 015872          214 LQD-----SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI--NGRTLTFSG  286 (399)
Q Consensus       214 l~~-----~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~--~g~~~~l~~  286 (399)
                      .+.     .++++..++||.+..++......           . .....+++.+|+|++++.++.++..  .++++...+
T Consensus       162 ~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-----------~-~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~  229 (235)
T 3l77_A          162 VRTFQIENPDVRFFELRPGAVDTYFGGSKPG-----------K-PKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV  229 (235)
T ss_dssp             HHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-----------C-CGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred             HHHHhhcCCCeEEEEEeCCccccccccccCC-----------c-ccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence            643     58999999999887654322110           0 1111578899999999999988653  466666665


Q ss_pred             CCC
Q 015872          287 PRA  289 (399)
Q Consensus       287 ~~~  289 (399)
                      ++.
T Consensus       230 ~~~  232 (235)
T 3l77_A          230 YQR  232 (235)
T ss_dssp             TSC
T ss_pred             ccC
Confidence            543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.80  E-value=1.8e-18  Score=159.16  Aligned_cols=207  Identities=11%  Similarity=0.069  Sum_probs=147.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC---------Ccc-------ccc--cCCcEEEEccCCCCCc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---------PAD-------FLR--DWGATVVNADLSKPET  141 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~---------~~~-------~l~--~~~v~~~~~Dl~d~~~  141 (399)
                      .+..|+++||||+|+||.++++.|+++|++|++++|+...         ...       .+.  ...+.++.+|++|+++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4567899999999999999999999999999999985221         000       111  1357889999999988


Q ss_pred             HHHHhc-------CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCCC-
Q 015872          142 IPATLV-------GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCDK-  197 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~~-  197 (399)
                      +.++++       ++|++||+||.....           ..+++|+.++.++++++.    +.+ -.+||++||..... 
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            877764       599999999943322           224689999988888754    333 45899999986543 


Q ss_pred             -CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchh-----hhcccc---ccccCCCCcceeceeH
Q 015872          198 -HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-----PILEEK---SVWGTDALTRIAYMDT  261 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~v~v  261 (399)
                       .....|+.+|...+.+.+       ..|+++..++||.+..+.......     ......   ..+..  .....+.+.
T Consensus       168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~r~~~p  245 (277)
T 3tsc_A          168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP--FLPDWVAEP  245 (277)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC--SSSCSCBCH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh--ccCCCCCCH
Confidence             334679999999998764       258999999999998765432110     000000   11111  111247899


Q ss_pred             HHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          262 QDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       262 ~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      +|+|++++.++.++.  ..|+++++.||.
T Consensus       246 edvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          246 EDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            999999999997643  468999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.80  E-value=3.9e-19  Score=163.35  Aligned_cols=204  Identities=11%  Similarity=0.040  Sum_probs=146.5

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCC--Ccccccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~--~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+  |+||.++++.|+++|++|++++|+...  ..+.+..  .++.++++|++|++++.++++       
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999  999999999999999999999998541  1111111  237889999999988877765       


Q ss_pred             CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                      ++|+|||+||....               +...++|+.++.++++++...-  -.+||++||....  ..+...|+.+|.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  163 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA  163 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHH
Confidence            68999999994321               1233589999999999997751  2589999997653  234467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      ..+.+.+       ..|++++.++||.+..+.......  ....  .+.... ... .+.+.+|+|++++.++.++  ..
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~-p~~-~~~~p~dva~~~~~l~s~~~~~~  239 (275)
T 2pd4_A          164 ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILK--WNEINA-PLR-KNVSLEEVGNAGMYLLSSLSSGV  239 (275)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHH--HHHHHS-TTS-SCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHH--HHHhcC-CcC-CCCCHHHHHHHHHHHhCccccCC
Confidence            9998763       358999999999998664332110  0000  000000 111 3678899999999999753  24


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++++.++.
T Consensus       240 tG~~~~vdgg~  250 (275)
T 2pd4_A          240 SGEVHFVDAGY  250 (275)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCCEEEECCCc
Confidence            68899998874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.80  E-value=3.9e-19  Score=162.22  Aligned_cols=207  Identities=15%  Similarity=0.140  Sum_probs=144.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+.  ..++.++++|++|++++.++++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3556899999999999999999999999999999997433221   111  1257889999999988876664       


Q ss_pred             CCCEEEECCCCC-CC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      ++|+|||+||.. ..           ....++|+.++.++++++..    .+..+||++||....  ......|+.+|..
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  163 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  163 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHH
Confidence            799999999854 21           12345789998888887654    356799999997543  2334579999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhh--------cc-cc----ccccCCCCcceeceeHHHHHHHHH
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPI--------LE-EK----SVWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~--------~~-~~----~~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      .+.+.+       ..|+++++++||.+..+.........        .. ..    ..+....... .+...+|+|++++
T Consensus       164 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~p~dvA~~v~  242 (262)
T 1zem_A          164 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-RYGDINEIPGVVA  242 (262)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-SCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCC-CCcCHHHHHHHHH
Confidence            887653       36899999999988765433210000        00 00    0000000111 3678899999999


Q ss_pred             HHHhCCc--cCCcEEEEcCC
Q 015872          270 VALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       270 ~~l~~~~--~~g~~~~l~~~  287 (399)
                      .++.++.  ..|+++.+.||
T Consensus       243 ~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          243 FLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHcCchhcCcCCcEEecCCC
Confidence            9987642  36888888764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.79  E-value=4.6e-19  Score=162.55  Aligned_cols=203  Identities=14%  Similarity=0.109  Sum_probs=137.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc-CCcEEEEccCCCCCcHHHHhcC-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-WGATVVNADLSKPETIPATLVG-------  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~v~~~~~Dl~d~~~l~~~~~~-------  148 (399)
                      .|+ |+|+||||+|+||.++++.|+++|++|++++|+.++....   +.. .++.++++|++|++++.++++.       
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            344 7899999999999999999999999999999974432211   111 2678899999999998888754       


Q ss_pred             CCEEEECCCCCCC-C-----------cchhccHHHHHHHHHHH----HHcCCc-EEEEecccCCCC--CCCCcHHHHHHH
Q 015872          149 VHTVIDCATGRPE-E-----------PIKKVDWEGKVALIQCA----KAMGIQ-KYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-~-----------~~~~~n~~~~~~l~~aa----~~~~v~-~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      +|+|||+||.... .           ..+++|+.++.++++++    ++.+.. +||++||.....  .....|+.+|..
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa  177 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAF  177 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHH
Confidence            5999999994321 1           12457888876665555    455667 999999986543  334679999999


Q ss_pred             HHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcE
Q 015872          210 TEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRT  281 (399)
Q Consensus       210 ~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~  281 (399)
                      .+.+.+.       .|+++++++||.+..++.......   ........ .....++..+|+|++++.++.++. ..++.
T Consensus       178 ~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~~~-~~~~~~~~pedvA~~v~~l~s~~~~~~g~~  253 (272)
T 2nwq_A          178 VEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG---DQARYDKT-YAGAHPIQPEDIAETIFWIMNQPAHLNINS  253 (272)
T ss_dssp             HHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc---chHHHHHh-hccCCCCCHHHHHHHHHHHhCCCccCccce
Confidence            9988743       589999999999886643221100   00000000 001135789999999999998754 34566


Q ss_pred             EEEcCC
Q 015872          282 LTFSGP  287 (399)
Q Consensus       282 ~~l~~~  287 (399)
                      +.+.++
T Consensus       254 i~v~~~  259 (272)
T 2nwq_A          254 LEIMPV  259 (272)
T ss_dssp             EEEEET
T ss_pred             EEEeec
Confidence            666654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.79  E-value=6.1e-19  Score=162.49  Aligned_cols=208  Identities=12%  Similarity=0.072  Sum_probs=148.7

Q ss_pred             CCCCCeEEEEcCCCh--hHHHHHHHHHHCCCcEEEEecCCC-CCccccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPRP-APADFLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~lv~~L~~~g~~V~~~~r~~~-~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .++.|+|+||||+|+  ||.++++.|+++|++|++++|+.. +..+.+.  ..++.++.+|++|.+++.++++       
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            456789999999977  999999999999999999999851 1111111  1258899999999988877764       


Q ss_pred             CCCEEEECCCCCCC----------------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHH
Q 015872          148 GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~----------------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                      .+|+|||+||....                ....++|+.++.++++++...   +..+||++||.....  .....|+.+
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA  182 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence            57999999994321                112468999999999888654   245999999976543  344679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      |...+.+.+       ..|+++..++||.+..+........ ......+....... .+.+.+|+|++++.++.++.  .
T Consensus       183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~-~~~~pedvA~~v~~l~s~~~~~~  260 (280)
T 3nrc_A          183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF-KKMLDYNAMVSPLK-KNVDIMEVGNTVAFLCSDMATGI  260 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH-HHHHHHHHHHSTTC-SCCCHHHHHHHHHHTTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch-HHHHHHHHhcCCCC-CCCCHHHHHHHHHHHhCcccCCc
Confidence            999998763       3689999999999986554322110 00000000000111 46788999999999987643  5


Q ss_pred             CCcEEEEcCCCC
Q 015872          278 NGRTLTFSGPRA  289 (399)
Q Consensus       278 ~g~~~~l~~~~~  289 (399)
                      .|+++++.||..
T Consensus       261 tG~~i~vdgG~~  272 (280)
T 3nrc_A          261 TGEVVHVDAGYH  272 (280)
T ss_dssp             CSCEEEESTTGG
T ss_pred             CCcEEEECCCcc
Confidence            789999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.79  E-value=7.6e-19  Score=160.67  Aligned_cols=204  Identities=17%  Similarity=0.137  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+++||||+|+||.+++++|+++|++|++.++......+.+    .  ...+.++++|++|++++.++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            34688999999999999999999999999999866544322211    1  1257889999999998887765       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                      ++|++||+||.....           ..+++|+.++.++++++...-  -.+||++||...  .......|+.+|...+.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEA  184 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHH
Confidence            789999999943221           223589999999998887642  248999998754  33445689999999998


Q ss_pred             HHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+.       .|+++..++||.+..+........-.  ...+......+ .+.+++|+|++++.++....  ..|++++
T Consensus       185 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG~~i~  261 (267)
T 3u5t_A          185 MTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV--RDRFAKLAPLE-RLGTPQDIAGAVAFLAGPDGAWVNGQVLR  261 (267)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECCBC-----------C--HHHHHTSSTTC-SCBCHHHHHHHHHHHHSTTTTTCCSEEEE
T ss_pred             HHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH--HHHHHhcCCCC-CCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            7642       58999999999987654322111000  01111111112 47788999999999997643  3689999


Q ss_pred             EcCC
Q 015872          284 FSGP  287 (399)
Q Consensus       284 l~~~  287 (399)
                      +.||
T Consensus       262 vdGG  265 (267)
T 3u5t_A          262 ANGG  265 (267)
T ss_dssp             ESSS
T ss_pred             eCCC
Confidence            9886

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.79  E-value=8e-19  Score=158.78  Aligned_cols=200  Identities=14%  Similarity=0.076  Sum_probs=138.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~  154 (399)
                      |+++||||+|+||.++++.|+++|++|++++|+.++......  ..++.++.+|++|++++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            579999999999999999999999999999997443221111  1257889999999999888775       6899999


Q ss_pred             CCCCCC-C-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh
Q 015872          155 CATGRP-E-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       155 ~a~~~~-~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~  216 (399)
                      +||... .           ...+++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...+.+.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence            999431 1           1234689999888877775    45667999999986543  3456899999999987642


Q ss_pred             -------CCCCEEEEecCccc-ccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEcCC
Q 015872          217 -------SGLPHVIIRLCGFM-QGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFSGP  287 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~~~  287 (399)
                             .|++++.++||.+. .++.......   ....... ......+++.+|+|++++.++.++. ..+..+.+...
T Consensus       161 la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~---~~~~~~~-~~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---DDGKAEK-TYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             HHHHhhhcCcEEEEEeccccccCcchhhcccC---chHHHHH-HHhccCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence                   58999999999998 4543211000   0000000 0001135689999999999998753 35677776553

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.79  E-value=5.5e-19  Score=161.48  Aligned_cols=208  Identities=12%  Similarity=0.029  Sum_probs=148.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .++.|+++||||+|.||.++++.|+++|++|++++|+.++...   .+.    ...+.++++|++|++++.++++     
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999997543221   111    1247889999999988877664     


Q ss_pred             --CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCC--CCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~--~~~~~y~~~K~  208 (399)
                        ++|++||+||....           ....++|+.++.++++++..    .+..+||++||.....  .....|+.+|.
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  164 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA  164 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHH
Confidence              68999999994322           12346899999998888754    3455899999976543  34467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc-------ccccC--CCCcceeceeHHHHHHHHHHHH
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-------SVWGT--DALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      ..+.+.+       ..|+++..++||.+..+.............       .....  ..... .+.+.+|+|++++.++
T Consensus       165 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~fL~  243 (265)
T 3lf2_A          165 GVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG-RLGKPIEAARAILFLA  243 (265)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC-SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC-CCcCHHHHHHHHHHHh
Confidence            9998763       258999999999998655433221000000       00000  00111 4678899999999999


Q ss_pred             hCCc--cCCcEEEEcCCC
Q 015872          273 RNEK--INGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~~--~~g~~~~l~~~~  288 (399)
                      .+..  ..|+++++.||.
T Consensus       244 s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          244 SPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             SGGGTTCCSEEEEESSSC
T ss_pred             CchhcCcCCCEEEECCCC
Confidence            7533  468999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.8e-19  Score=163.70  Aligned_cols=206  Identities=14%  Similarity=0.123  Sum_probs=144.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .|+++||||+|+||.+++++|+++|  +.|++.+|+.+.......  ..++.++++|++|++++.++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            4789999999999999999999985  789888887443222111  1257889999999988877765       7899


Q ss_pred             EEECCCCCCC------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPE------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +||+||....            +..+++|+.++.++++++    ++.+ .++|++||.....  .+...|+.+|...+.+
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  160 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHF  160 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHH
Confidence            9999994211            123468999999988887    5555 6999999986543  3456899999999987


Q ss_pred             HHh-----CCCCEEEEecCcccccccccchhhhc----ccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc---cCC
Q 015872          214 LQD-----SGLPHVIIRLCGFMQGLIGQYAVPIL----EEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK---ING  279 (399)
Q Consensus       214 l~~-----~g~~~~ilRp~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~---~~g  279 (399)
                      .+.     .++++..++||.+..+..........    ...  ..+......+ .+.+.+|+|++++.++.++.   ..|
T Consensus       161 ~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dva~~v~~L~s~~~~~~itG  239 (254)
T 3kzv_A          161 AMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENN-QLLDSSVPATVYAKLALHGIPDGVNG  239 (254)
T ss_dssp             HHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHCCCGGGTT
T ss_pred             HHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcC-CcCCcccHHHHHHHHHhhcccCCCCc
Confidence            642     58999999999998665433211100    000  0010000111 47788999999999997653   478


Q ss_pred             cEEEEcCCCCC
Q 015872          280 RTLTFSGPRAW  290 (399)
Q Consensus       280 ~~~~l~~~~~~  290 (399)
                      +.+++.+++..
T Consensus       240 ~~i~vdg~~~~  250 (254)
T 3kzv_A          240 QYLSYNDPALA  250 (254)
T ss_dssp             CEEETTCGGGG
T ss_pred             cEEEecCcccc
Confidence            99999887643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.79  E-value=3.4e-18  Score=160.26  Aligned_cols=210  Identities=13%  Similarity=0.166  Sum_probs=148.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--------cc-------ccc--cCCcEEEEccCCCCCcH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--------AD-------FLR--DWGATVVNADLSKPETI  142 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--------~~-------~l~--~~~v~~~~~Dl~d~~~l  142 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+....        .+       .+.  ...+.++++|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            45678999999999999999999999999999999863221        00       011  12578899999999988


Q ss_pred             HHHhc-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cC-CcEEEEecccCCCC--
Q 015872          143 PATLV-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK--  197 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~-v~~~V~~Ss~~~~~--  197 (399)
                      .++++       ++|+|||+||....           +..+++|+.++.++++++..    .+ -.+||++||.....  
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~  202 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA  202 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence            87765       79999999994321           12346899999888887743    23 35899999976543  


Q ss_pred             CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccc-----hhhhcccc------ccccCCCCcceece
Q 015872          198 HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQY-----AVPILEEK------SVWGTDALTRIAYM  259 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~v  259 (399)
                      .....|+.+|...+.+.+       ..|+++..++||.+..+.....     +.+.....      ..+......+..++
T Consensus       203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  282 (317)
T 3oec_A          203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV  282 (317)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSB
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCC
Confidence            334679999999998763       2589999999999986543210     00000000      11111112223688


Q ss_pred             eHHHHHHHHHHHHhCCc--cCCcEEEEcCCCC
Q 015872          260 DTQDIARLTFVALRNEK--INGRTLTFSGPRA  289 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~  289 (399)
                      +++|+|++++.++.+..  ..|+++++.||..
T Consensus       283 ~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            99999999999986543  4689999999853

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.79  E-value=2.2e-18  Score=159.10  Aligned_cols=197  Identities=15%  Similarity=0.211  Sum_probs=142.9

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----------cc--cCCcEEEEccCCCCCcHHHHh
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LR--DWGATVVNADLSKPETIPATL  146 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----------l~--~~~v~~~~~Dl~d~~~l~~~~  146 (399)
                      +.++.|+++||||+|.||.+++++|+++|++|++++|+.++..+.          +.  ..++.++++|++|++++.+++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            356678999999999999999999999999999999986542211          11  125788999999999887776


Q ss_pred             c-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc----CCcEEEEecccCCCC---CCCC
Q 015872          147 V-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK---HPEV  201 (399)
Q Consensus       147 ~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~~~---~~~~  201 (399)
                      +       ++|++||+||....           +..+++|+.++.++++++...    +..+||++||.....   .+..
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPT  164 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCc
Confidence            5       79999999994321           122358999999999988654    456999999976543   3446


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCccc-ccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFM-QGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .|+.+|...+.+.+       ..|+++..++||++. ......    ......      ... .+...+|+|++++.++.
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~----~~~~~~------~~~-r~~~pedvA~~~~~l~s  233 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN----LLGGDE------AMA-RSRKPEVYADAAYVVLN  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH----HHTSCC------CCT-TCBCTHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh----hccccc------ccc-CCCCHHHHHHHHHHHhC
Confidence            79999999998763       268999999998543 332211    111110      111 45678999999999998


Q ss_pred             CCc-cCCcEEEEcC
Q 015872          274 NEK-INGRTLTFSG  286 (399)
Q Consensus       274 ~~~-~~g~~~~l~~  286 (399)
                      ++. ..|+.+.+.+
T Consensus       234 ~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          234 KPSSYTGNTLLCED  247 (285)
T ss_dssp             SCTTCCSCEEEHHH
T ss_pred             CcccccceEEEEcC
Confidence            764 3456655544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.79  E-value=1.4e-18  Score=158.56  Aligned_cols=185  Identities=13%  Similarity=0.103  Sum_probs=133.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      .+..++||||||+|+||.+++++|+++|++|++++|+.++....   +..  ..+.++.+|++|.+++.++++       
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999975432221   111  257889999999998877764       


Q ss_pred             CCCEEEECCCC-CCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATG-RPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~-~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      .+|+|||+||. ...           ....++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|..
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  185 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWG  185 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHH
Confidence            58999999995 211           1234689999888888764    45667999999987643  344679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+.+       ..|+++..++||.+..++......    .        .....+++.+|+|++++.++..+.
T Consensus       186 ~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~--------~~~~~~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          186 LNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----K--------KSALGAIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----c--------cccccCCCHHHHHHHHHHHhcCcc
Confidence            998763       368999999999887654322110    0        111256789999999999998743

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.79  E-value=4.9e-19  Score=163.62  Aligned_cols=204  Identities=14%  Similarity=0.152  Sum_probs=147.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc---
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      ++.|+|+||||+|+||.++++.|+++|+   +|++++|+.+...+.   +.    ...+.++++|++|++++.++++   
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568899999999999999999999987   999999975432221   11    2357889999999999988875   


Q ss_pred             ----CCCEEEECCCCCC-C-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHH
Q 015872          148 ----GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLME  205 (399)
Q Consensus       148 ----~~d~Vi~~a~~~~-~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~  205 (399)
                          ++|+|||+||... .           +..+++|+.++.++++++    ++.+..+||++||.....  .....|+.
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  190 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCA  190 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHH
Confidence                5899999999432 1           123468999999988887    455667999999986543  34567999


Q ss_pred             HHHHHHHHHH----h---CCCCEEEEecCcccccccccchhhhccc-cccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          206 IKYCTEQFLQ----D---SGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       206 ~K~~~E~~l~----~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      +|...+.+.+    +   .|+++..++||.+..++........... ...+.    . ..++..+|+|++++.++.++..
T Consensus       191 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~-~~p~~pedvA~~v~~l~s~~~~  265 (287)
T 3rku_A          191 SKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK----D-TTPLMADDVADLIVYATSRKQN  265 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT----T-SCCEEHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc----c-cCCCCHHHHHHHHHHHhCCCCC
Confidence            9999998763    2   6899999999998765432111000000 00110    1 1245889999999999987542


Q ss_pred             --CCcEEEEcCCCC
Q 015872          278 --NGRTLTFSGPRA  289 (399)
Q Consensus       278 --~g~~~~l~~~~~  289 (399)
                        .|+++.+.+++.
T Consensus       266 ~i~g~~i~v~~g~~  279 (287)
T 3rku_A          266 TVIADTLIFPTNQA  279 (287)
T ss_dssp             EEEEEEEEEETTEE
T ss_pred             eEecceEEeeCCCC
Confidence              578888888764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.79  E-value=1e-18  Score=159.44  Aligned_cols=202  Identities=14%  Similarity=0.102  Sum_probs=135.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc--CCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      +.|+|+||||+|+||.++++.|+++|++|++++|+.++...   .+..  ..+.++.+|++|++++.++++       ++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999997543221   1211  246788999999988877764       79


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||.....           ...++|+.++..+++++.    +.+..+||++||.....  .....|+.+|...+.
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~  162 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA  162 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence            9999999943321           224688899887777663    45667999999986543  344579999999987


Q ss_pred             HHH----h-CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc--CCcEEEEc
Q 015872          213 FLQ----D-SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI--NGRTLTFS  285 (399)
Q Consensus       213 ~l~----~-~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~--~g~~~~l~  285 (399)
                      +.+    + .|+++..++||.+..++..........  ....   .....+...+|+|++++.++.++..  .+++....
T Consensus       163 l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~--~~~~---~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p  237 (264)
T 3tfo_A          163 ISDGLRQESTNIRVTCVNPGVVESELAGTITHEETM--AAMD---TYRAIALQPADIARAVRQVIEAPQSVDTTEITIRP  237 (264)
T ss_dssp             HHHHHHHHCSSEEEEEEEECCC----------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEE
T ss_pred             HHHHHHHhCCCCEEEEEecCCCcCcccccccchhHH--HHHH---hhhccCCCHHHHHHHHHHHhcCCccCccceEEEec
Confidence            763    2 389999999998876554332111000  0000   1111257899999999999998653  34455444


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      +++
T Consensus       238 ~~~  240 (264)
T 3tfo_A          238 TAS  240 (264)
T ss_dssp             CC-
T ss_pred             Ccc
Confidence            443

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.79  E-value=2.1e-19  Score=162.33  Aligned_cols=195  Identities=14%  Similarity=0.100  Sum_probs=125.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC---CcHHHHh---cCCCEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP---ETIPATL---VGVHTVI  153 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~---~~l~~~~---~~~d~Vi  153 (399)
                      ++++|+|+||||+|+||.+++++|++ |+.|++++|+.+.........++.++.+|++|.   +.+.+.+   .++|+||
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence            34568999999999999999999988 999999999754333222234688999999875   2232333   3789999


Q ss_pred             ECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-
Q 015872          154 DCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       154 ~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-  215 (399)
                      |+||....           ....++|+.++.++++++.    +.+ .++|++||.....  .+...|+.+|...+.+.+ 
T Consensus        81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  159 (245)
T 3e9n_A           81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADA  159 (245)
T ss_dssp             ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHH
Confidence            99994322           1234688988777776653    434 6899999976543  345679999999998764 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                            ..|+++..++||.+.++............   +    .. ..+++++|+|++++.++.++. .+.++++.
T Consensus       160 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~----~~-~~~~~p~dvA~~i~~l~~~~~-~~~~~~i~  226 (245)
T 3e9n_A          160 FRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTN---F----RP-EIYIEPKEIANAIRFVIDAGE-TTQITNVD  226 (245)
T ss_dssp             HHHHHGGGTCEEEEEEECCC-----------------------CC-GGGSCHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred             HHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcc---c----cc-ccCCCHHHHHHHHHHHHcCCC-ccceeeeE
Confidence                  26899999999999876544322111100   0    11 257899999999999998865 45677764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.78  E-value=9.6e-19  Score=156.41  Aligned_cols=182  Identities=13%  Similarity=0.130  Sum_probs=130.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhcCC----CEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLVGV----HTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~----d~Vi~~a  156 (399)
                      ||+|+||||+|+||.+++++|+++|++|++++|+.++..+...  ..++.++.+|++|.+++.++++.+    |+|||+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            3679999999999999999999999999999998543322222  236789999999999999888754    9999999


Q ss_pred             CCCCCC-----------cchhccHHHHHHHHHHHHHcCC---cEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-----
Q 015872          157 TGRPEE-----------PIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-----  215 (399)
Q Consensus       157 ~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~v---~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-----  215 (399)
                      |.....           ...++|+.++.++++++...-.   .++|++||.....  .+...|+.+|...+.+.+     
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  160 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLE  160 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            943222           1336899999999888865422   2899999976543  345679999999998763     


Q ss_pred             --hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          216 --DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                        ..|+++..++||.+..++.......           ... ..+.+.+|+|++++.++.++.
T Consensus       161 ~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------~~~-~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          161 LKGKPMKIIAVYPGGMATEFWETSGKS-----------LDT-SSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             TTTSSCEEEEEEECCC----------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHhcCeEEEEEECCcccChHHHhcCCC-----------CCc-ccCCCHHHHHHHHHHHHhCcC
Confidence              2589999999998876544321110           011 257889999999999997643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.78  E-value=4.2e-19  Score=159.27  Aligned_cols=183  Identities=17%  Similarity=0.147  Sum_probs=131.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      |++|+|+||||+|+||.+++++|+++|++|++++|+.++..+...  ..++.++.+|++|++++.++++       .+|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            346789999999999999999999999999999997543221111  1258899999999988877764       6899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      |||+||....           +..+++|+.++..+++++...   .-.++|++||.....  .....|+.+|...+.+.+
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  160 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLE  160 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            9999994221           123468999998888887532   113899999976543  234579999999998764


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                             ..|+++..++||.+..++......            ... ..+.+.+|+|++++.++.++.
T Consensus       161 ~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~~~-~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          161 SLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------VDP-SGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHTTTSSEEEEEEEEEEECCCC------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHhhccCCEEEEEeCCCccCcchhccCC------------CCC-cCCCCHHHHHHHHHHHHhCCC
Confidence                   357999999999887554322110            011 157889999999999998654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.78  E-value=1.3e-18  Score=160.88  Aligned_cols=204  Identities=15%  Similarity=0.113  Sum_probs=143.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC-CCCc---cccc---cCCcEEEEccCCC----CCcHHHHhc-
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPA---DFLR---DWGATVVNADLSK----PETIPATLV-  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~-~~~~---~~l~---~~~v~~~~~Dl~d----~~~l~~~~~-  147 (399)
                      .++.|+|+||||+|+||.++++.|+++|++|++++|+. +...   +.+.   ...+.++++|++|    ++++.++++ 
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999985 3211   1111   2357889999999    777766654 


Q ss_pred             ------CCCEEEECCCCCCC---------C------------cchhccHHHHHHHHHHHHHc----C------CcEEEEe
Q 015872          148 ------GVHTVIDCATGRPE---------E------------PIKKVDWEGKVALIQCAKAM----G------IQKYVFY  190 (399)
Q Consensus       148 ------~~d~Vi~~a~~~~~---------~------------~~~~~n~~~~~~l~~aa~~~----~------v~~~V~~  190 (399)
                            ++|+|||+||....         +            ...++|+.++..+++++...    +      ..+||++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                  79999999994221         1            12357888988888877543    2      4589999


Q ss_pred             cccCCCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceec-ee
Q 015872          191 SIHNCDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAY-MD  260 (399)
Q Consensus       191 Ss~~~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~  260 (399)
                      ||.....  .+...|+.+|...+.+.+       ..|+++++++||.+.++. . .......  . +....... .+ .+
T Consensus       180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~--~-~~~~~p~~-r~~~~  253 (288)
T 2x9g_A          180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKD--K-WRRKVPLG-RREAS  253 (288)
T ss_dssp             CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHH--H-HHHTCTTT-SSCCC
T ss_pred             ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHH--H-HHhhCCCC-CCCCC
Confidence            9987643  334679999999987763       258999999999998765 2 1110000  0 00000111 24 68


Q ss_pred             HHHHHHHHHHHHhCC--ccCCcEEEEcCCCC
Q 015872          261 TQDIARLTFVALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       261 v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      .+|+|++++.++.+.  ...|+++++.|+..
T Consensus       254 pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          254 AEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            899999999999763  34688999988753

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.78  E-value=2e-18  Score=160.04  Aligned_cols=209  Identities=9%  Similarity=-0.018  Sum_probs=146.8

Q ss_pred             CCCCCeEEEEcCCCh--hHHHHHHHHHHCCCcEEEEecCCCCC--ccccc--cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPRPAP--ADFLR--DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~--~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++.|+|+||||+|+  ||.++++.|+++|++|++++|+....  ...+.  ..++.++++|++|++++.++++      
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            456789999999988  99999999999999999999973211  11111  1257889999999998887765      


Q ss_pred             -CCCEEEECCCCCC----C-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHHH
Q 015872          148 -GVHTVIDCATGRP----E-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIK  207 (399)
Q Consensus       148 -~~d~Vi~~a~~~~----~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K  207 (399)
                       ++|++||+||...    .           ...+++|+.++.++++++...-  -.+||++||....  ......|+.+|
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK  187 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK  187 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence             6899999999542    1           1224689999999999987653  3499999997654  33457899999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      ...+.+.+       ..|+++..++||.+...........- .....+....... .+.+.+|+|++++.++.+..  ..
T Consensus       188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~it  265 (293)
T 3grk_A          188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFR-YILKWNEYNAPLR-RTVTIDEVGDVGLYFLSDLSRSVT  265 (293)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHH-HHHHHHHHHSTTS-SCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchH-HHHHHHHhcCCCC-CCCCHHHHHHHHHHHcCccccCCc
Confidence            99998763       26899999999999865432211000 0000000000111 36788999999999997643  46


Q ss_pred             CcEEEEcCCCCC
Q 015872          279 GRTLTFSGPRAW  290 (399)
Q Consensus       279 g~~~~l~~~~~~  290 (399)
                      |+++++.||..+
T Consensus       266 G~~i~vdGG~~~  277 (293)
T 3grk_A          266 GEVHHADSGYHV  277 (293)
T ss_dssp             SCEEEESTTGGG
T ss_pred             ceEEEECCCccc
Confidence            899999998643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.78  E-value=1.1e-18  Score=159.10  Aligned_cols=211  Identities=13%  Similarity=0.086  Sum_probs=144.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc------ccccc--CCcEEEEccCCCCCcHHHHhc---
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRD--WGATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~------~~l~~--~~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      .+++.|+|+||||+|+||.++++.|+++|++|++++|......      ..+..  .++.++++|++|++++.++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999988532211      11122  247889999999998887775   


Q ss_pred             ----CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 ----GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 ----~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                          ++|++||+||.....           ...++|+.++.++++++...  +..++|++||....  ......|+.+|.
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKa  166 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKA  166 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----C
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHH
Confidence                689999999943221           22358999999999999875  34589999987542  334568999999


Q ss_pred             HHHHHHH----h---CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCc
Q 015872          209 CTEQFLQ----D---SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGR  280 (399)
Q Consensus       209 ~~E~~l~----~---~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~  280 (399)
                      ..+.+.+    +   .|+++..++||.+..++.......-.  ...+......+ .+.+.+|+|++++.++.+.. ..|+
T Consensus       167 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~-r~~~pedvA~~v~~L~s~~~~itG~  243 (262)
T 3ksu_A          167 PVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES--TAFHKSQAMGN-QLTKIEDIAPIIKFLTTDGWWINGQ  243 (262)
T ss_dssp             HHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------CCC-CSCCGGGTHHHHHHHHTTTTTCCSC
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH--HHHHHhcCccc-CCCCHHHHHHHHHHHcCCCCCccCC
Confidence            9998764    2   58999999999987654322111000  01111111111 46788999999999998622 4689


Q ss_pred             EEEEcCCCCCCH
Q 015872          281 TLTFSGPRAWTT  292 (399)
Q Consensus       281 ~~~l~~~~~~s~  292 (399)
                      ++++.|+.....
T Consensus       244 ~i~vdGg~~~~~  255 (262)
T 3ksu_A          244 TIFANGGYTTRE  255 (262)
T ss_dssp             EEEESTTCCCC-
T ss_pred             EEEECCCccCCC
Confidence            999999865443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.78  E-value=1.2e-18  Score=158.06  Aligned_cols=206  Identities=17%  Similarity=0.119  Sum_probs=145.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----cccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+|+||||+|+||.+++++|+++|++|+++++.......    .+..  ..+.++.+|++|.+++.++++       
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999997654333211    1111  246788999999888776654       


Q ss_pred             ------CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHH
Q 015872          148 ------GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       148 ------~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                            .+|+|||+||.....           ...++|+.++.++++++...  +..+||++||.....  .....|+.+
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  164 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT  164 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence                  289999999943322           12358999999999998765  334899999986543  334679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      |...+.+.+       ..|+++..++||.+..+........... ..........+ .+.+++|+|++++.++..+  ..
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~  242 (255)
T 3icc_A          165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMM-KQYATTISAFN-RLGEVEDIADTAAFLASPDSRWV  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHH-HHHHHHTSTTS-SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHH-HHhhhccCCcC-CCCCHHHHHHHHHHHhCcccCCc
Confidence            999998763       2589999999999986654332111000 00011111112 4778999999999998653  34


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++++.||.
T Consensus       243 tG~~i~vdgG~  253 (255)
T 3icc_A          243 TGQLIDVSGGS  253 (255)
T ss_dssp             CSCEEEESSST
T ss_pred             cCCEEEecCCe
Confidence            68999999875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.78  E-value=6e-19  Score=163.07  Aligned_cols=184  Identities=13%  Similarity=0.087  Sum_probs=135.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +..++|+||||+|+||.++++.|+++|++|++++|+.++....   +.   ..++.++.+|++|.+++.++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999999999975432211   11   1247889999999988877764       


Q ss_pred             CCCEEEEC-CCCCCC----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHH
Q 015872          148 GVHTVIDC-ATGRPE----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTE  211 (399)
Q Consensus       148 ~~d~Vi~~-a~~~~~----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E  211 (399)
                      ++|+|||+ +|....          ....++|+.++.++++++...   +..+||++||.....  .+...|+.+|...+
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  185 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD  185 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence            79999999 553211          123468999999888877543   236999999976542  34567999999998


Q ss_pred             HHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          212 QFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       212 ~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+         ..++++++++||.+..+.....    ..+        .....+++.+|+|+.++.+++.+.
T Consensus       186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~----~~~--------~~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA----VSG--------IVHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH----SCG--------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHh----ccc--------cccCCCCCHHHHHHHHHHHHhcCC
Confidence            7652         3589999999999876543221    111        112357889999999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.77  E-value=1.2e-17  Score=153.28  Aligned_cols=191  Identities=13%  Similarity=0.139  Sum_probs=138.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---------cCCcEEEEccCCCCCcHHHHhc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---------DWGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---------~~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .++.|+++||||+|.||.+++++|+++|++|++++|+.++....   +.         ..++.++++|++|++++.++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999986542211   11         1247889999999988877764


Q ss_pred             -------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCCC----CCC
Q 015872          148 -------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDKH----PEV  201 (399)
Q Consensus       148 -------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~~----~~~  201 (399)
                             ++|++||+||....           +..+++|+.++..+++++..    .+..+||++||......    ...
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  162 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT  162 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCH
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCc
Confidence                   78999999994321           12235899999988888754    45569999999876543    345


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+       ..|+++..++||++.......    ...+.       . ...+...+|+|++++.++..
T Consensus       163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~----~~~~~-------~-~~~~~~pedvA~~v~~l~s~  230 (274)
T 3e03_A          163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN----MLPGV-------D-AAACRRPEIMADAAHAVLTR  230 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------CC-------C-GGGSBCTHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh----hcccc-------c-ccccCCHHHHHHHHHHHhCc
Confidence            79999999998763       368999999998544322111    11110       1 11366789999999999976


Q ss_pred             Cc--cCCcEE
Q 015872          275 EK--INGRTL  282 (399)
Q Consensus       275 ~~--~~g~~~  282 (399)
                      +.  ..|+++
T Consensus       231 ~~~~itG~~i  240 (274)
T 3e03_A          231 EAAGFHGQFL  240 (274)
T ss_dssp             CCTTCCSCEE
T ss_pred             cccccCCeEE
Confidence            43  356666

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.77  E-value=1.4e-18  Score=160.21  Aligned_cols=193  Identities=14%  Similarity=0.096  Sum_probs=132.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +++.|+|+||||+|+||.++++.|+++|++|++++|+.+.......      ...+.++++|++|++++.++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4557899999999999999999999999999999997543222111      1124889999999988877764      


Q ss_pred             -CCCEEEECCCCCCC-C-----------cchhccHHHHHHHHHHHH----HcC--CcEEEEecccCCCC--CCCCcHHHH
Q 015872          148 -GVHTVIDCATGRPE-E-----------PIKKVDWEGKVALIQCAK----AMG--IQKYVFYSIHNCDK--HPEVPLMEI  206 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-~-----------~~~~~n~~~~~~l~~aa~----~~~--v~~~V~~Ss~~~~~--~~~~~y~~~  206 (399)
                       ++|+|||+||.... .           ...++|+.++.++.+++.    +.+  ..+||++||.....  .+...|+.+
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  189 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTAT  189 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHH
Confidence             68999999994321 1           134688888877766664    333  45999999986543  345679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      |...+.+.+       ..|+++..++||.+..+............   .  .......++..+|+|++++.++.++..
T Consensus       190 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~--~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          190 KHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA---N--GEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT---T--SCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh---h--hcccccCCCCHHHHHHHHHHHhCCCcc
Confidence            999998763       36899999999988866543321111100   0  001112477899999999999998653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.77  E-value=1.1e-17  Score=150.10  Aligned_cols=197  Identities=13%  Similarity=0.123  Sum_probs=142.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHh-------cCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-------VGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~-------~~~d~Vi~  154 (399)
                      .|+|+||||++.||.++++.|+++|++|.+.+|+.+...+..+. .++..+++|++|++++.+++       .++|++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            58899999999999999999999999999999974433222222 25788999999998887665       36899999


Q ss_pred             CCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh-
Q 015872          155 CATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       155 ~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~-  216 (399)
                      +||....           +...++|+.++..+.+++.    +.+ .++|++||.....  .....|..+|..+..+.+. 
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~l  160 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL  160 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            9983322           2223588888877766654    334 5899999986532  2345799999999876532 


Q ss_pred             -----CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC
Q 015872          217 -----SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR  288 (399)
Q Consensus       217 -----~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~  288 (399)
                           .++++..|.||.+.......+........      +-.  -+...+|+|.+++.++.+.-..|+++.+.||-
T Consensus       161 A~ela~~IrVN~I~PG~i~t~~~~~~~~~~~~~~------Pl~--R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          161 AMSLGPDVLVNCIAPGWINVTEQQEFTQEDCAAI------PAG--KVGTPKDISNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             HHHHTTTSEEEEEEECSBCCCC---CCHHHHHTS------TTS--SCBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             HHHHCCCCEEEEEecCcCCCCCcHHHHHHHHhcC------CCC--CCcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence                 48999999999886543333222222111      111  25677999999999998766679999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.77  E-value=3.2e-18  Score=152.53  Aligned_cols=203  Identities=12%  Similarity=0.096  Sum_probs=144.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc---CCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~a~~  158 (399)
                      +.|+++||||++.||..+++.|+++|++|.+.+|+.+... .....++..+++|++|++++.++++   ++|++||+||.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH-APRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT-SCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh-hhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            5789999999999999999999999999999999855433 2334578899999999998887765   68999999993


Q ss_pred             CCC---------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-------h
Q 015872          159 RPE---------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-------D  216 (399)
Q Consensus       159 ~~~---------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-------~  216 (399)
                      ..+         +...++|+.++..+.+++.    +.+ .+||++||....  ......|..+|..+..+.+       .
T Consensus        89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~  167 (242)
T 4b79_A           89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAA  167 (242)
T ss_dssp             CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            321         2234688888877666653    333 589999998653  3344679999999997653       3


Q ss_pred             CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          217 SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      .|+++..|.||.+..+..............+...-+-.  -+...+|+|.+++.++.+..  ..|+++.+.||-
T Consensus       168 ~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg--R~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          168 ERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA--RWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             GTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC--SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhcCccCceEEECccH
Confidence            78999999999887554332211100000010001111  25677999999999986543  468999998873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.77  E-value=1e-18  Score=161.05  Aligned_cols=209  Identities=14%  Similarity=0.083  Sum_probs=144.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||+|+||.+++++|+++|++|++++|+.+...+...  ..++.++++|++|++++.++++       ++|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3557899999999999999999999999999999997543222111  2368889999999988776654       689


Q ss_pred             EEEECCCCCCC----------------CcchhccHHHHHHHHHHHHHcC---CcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          151 TVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAMG---IQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       151 ~Vi~~a~~~~~----------------~~~~~~n~~~~~~l~~aa~~~~---v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                      ++||+||....                +..+++|+.++..+++++...-   -.++|++||.....  .....|+.+|..
T Consensus        82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  161 (281)
T 3zv4_A           82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHA  161 (281)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHH
T ss_pred             EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHH
Confidence            99999994211                1124589999998888875431   25899999876543  334579999999


Q ss_pred             HHHHHHh------CCCCEEEEecCcccccccccchhhhc----ccc---ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          210 TEQFLQD------SGLPHVIIRLCGFMQGLIGQYAVPIL----EEK---SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       210 ~E~~l~~------~g~~~~ilRp~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .+.+.+.      ..+++..++||.+..++.........    ...   ..+......+ .+...+|+|++++.++.++.
T Consensus       162 ~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~fL~s~~~  240 (281)
T 3zv4_A          162 VVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG-RMPALEEYTGAYVFFATRGD  240 (281)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS-SCCCGGGGSHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC-CCCCHHHHHHHHHHhhcccc
Confidence            9987632      23999999999987654322111000    000   0000000111 46788999999999997322


Q ss_pred             ---cCCcEEEEcCCCC
Q 015872          277 ---INGRTLTFSGPRA  289 (399)
Q Consensus       277 ---~~g~~~~l~~~~~  289 (399)
                         ..|+++++.||..
T Consensus       241 ~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          241 SLPATGALLNYDGGMG  256 (281)
T ss_dssp             STTCSSCEEEESSSGG
T ss_pred             cccccCcEEEECCCCc
Confidence               4789999998853

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.77  E-value=5.2e-18  Score=155.10  Aligned_cols=205  Identities=13%  Similarity=0.100  Sum_probs=148.1

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecCCCCC-ccc---cc---cCCcEEEEccCCCCCcHHHHhc---
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---LR---DWGATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~---l~---~~~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      +++.|+|+||||+  |+||.+++++|+++|++|++++|+..+. .+.   +.   ..++.++++|++|++++.++++   
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            4567899999999  8999999999999999999999976543 111   11   2367889999999988877764   


Q ss_pred             ----CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC----CCCCcHH
Q 015872          148 ----GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK----HPEVPLM  204 (399)
Q Consensus       148 ----~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~----~~~~~y~  204 (399)
                          .+|+|||+||.....           ...++|+.++.++++++    ++.+..+||++||.....    .+...|+
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  176 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN  176 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcch
Confidence                679999999943221           23468999998888877    455667999999976532    2456799


Q ss_pred             HHHHHHHHHHH----hC--CCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          205 EIKYCTEQFLQ----DS--GLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       205 ~~K~~~E~~l~----~~--g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      .+|...+.+.+    +.  .+++..+.||.+..+..........   ..+......+ .+.+.+|+|++++.++.+.  .
T Consensus       177 ~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~-r~~~~~dva~~~~~l~s~~~~~  252 (267)
T 3gdg_A          177 VAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQ---QLWHSMIPMG-RDGLAKELKGAYVYFASDASTY  252 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHH---HHHHTTSTTS-SCEETHHHHHHHHHHHSTTCTT
T ss_pred             HHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHH---HHHHhcCCCC-CCcCHHHHHhHhheeecCcccc
Confidence            99999998764    22  2789999999887654432211110   1111111222 5778899999999999763  3


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+++++.||.
T Consensus       253 itG~~i~vdgG~  264 (267)
T 3gdg_A          253 TTGADLLIDGGY  264 (267)
T ss_dssp             CCSCEEEESTTG
T ss_pred             ccCCEEEECCce
Confidence            468999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.76  E-value=9.3e-18  Score=155.43  Aligned_cols=205  Identities=15%  Similarity=0.053  Sum_probs=145.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEe-cCCCCCcc---ccc---cCCcEEEEccCCCCC------------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPAD---FLR---DWGATVVNADLSKPE------------  140 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~-r~~~~~~~---~l~---~~~v~~~~~Dl~d~~------------  140 (399)
                      .++.|+++||||+|+||.++++.|+++|++|++++ |+.+....   .+.   ..++.++++|++|++            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            35568999999999999999999999999999999 87432211   111   235788999999999            


Q ss_pred             -----cHHHHhc-------CCCEEEECCCCCCC----------------------C---cchhccHHHHHHHHHHHH---
Q 015872          141 -----TIPATLV-------GVHTVIDCATGRPE----------------------E---PIKKVDWEGKVALIQCAK---  180 (399)
Q Consensus       141 -----~l~~~~~-------~~d~Vi~~a~~~~~----------------------~---~~~~~n~~~~~~l~~aa~---  180 (399)
                           ++.++++       ++|+|||+||....                      +   ..+++|+.++..+++++.   
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 8877765       78999999983211                      1   123578888888888775   


Q ss_pred             -HcC------CcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccc
Q 015872          181 -AMG------IQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE  244 (399)
Q Consensus       181 -~~~------v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~  244 (399)
                       +.+      ..+||++||.....  .....|+.+|...+.+.+       ..|+++..++||.+..++ . +...... 
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~~~~~-  242 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPAVWE-  242 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCHHHHH-
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCHHHHH-
Confidence             334      57999999987643  345679999999998763       358999999999987665 2 1101000 


Q ss_pred             cccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCCC
Q 015872          245 KSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       245 ~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~  289 (399)
                       .+....+.. ..+...+|+|++++.++..+  ...|+++++.|+..
T Consensus       243 -~~~~~~p~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          243 -GHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             -HHHTTCTTT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -HHHhhCCCC-CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence             000000111 03678899999999999753  34688999998754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.76  E-value=2.5e-17  Score=155.91  Aligned_cols=196  Identities=11%  Similarity=0.158  Sum_probs=142.5

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----------cccc--CCcEEEEccCCCCCcHHHHh
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRD--WGATVVNADLSKPETIPATL  146 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----------~l~~--~~v~~~~~Dl~d~~~l~~~~  146 (399)
                      ..++.|+|+||||+|.||.++++.|+++|++|++++|+.++..+          .+..  ..+.++++|++|++++.+++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            34667899999999999999999999999999999998654221          1111  24778999999999888777


Q ss_pred             c-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC----CCC
Q 015872          147 V-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK----HPE  200 (399)
Q Consensus       147 ~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~----~~~  200 (399)
                      +       ++|+|||+||....           +..+++|+.++.++++++.    +.+..+||++||.....    .+.
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~  200 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH  200 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence            5       79999999994221           2235789999999999884    34567999999986543    345


Q ss_pred             CcHHHHHHHHHHHHH----h--CCCCEEEEecCc-ccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          201 VPLMEIKYCTEQFLQ----D--SGLPHVIIRLCG-FMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       201 ~~y~~~K~~~E~~l~----~--~g~~~~ilRp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      ..|+.+|..++.+.+    +  .|+++..+.||. +......     .+.+.      .... .+...+|+|++++.++.
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~-----~~~~~------~~~~-r~~~pedvA~~v~~L~s  268 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD-----MLGGP------GIES-QCRKVDIIADAAYSIFQ  268 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHH-----HHCC--------CGG-GCBCTHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHH-----hhccc------cccc-cCCCHHHHHHHHHHHHh
Confidence            679999999988763    2  579999999986 4333221     11111      0111 46678999999999998


Q ss_pred             CCc-cCCcEEEEcCC
Q 015872          274 NEK-INGRTLTFSGP  287 (399)
Q Consensus       274 ~~~-~~g~~~~l~~~  287 (399)
                      +.. ..|+++ +.++
T Consensus       269 ~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          269 KPKSFTGNFV-IDEN  282 (346)
T ss_dssp             SCTTCCSCEE-EHHH
T ss_pred             cCCCCCceEE-ECCc
Confidence            732 356766 5543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.75  E-value=7.9e-18  Score=152.02  Aligned_cols=193  Identities=17%  Similarity=0.178  Sum_probs=139.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccC--CCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADL--SKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl--~d~~~l~~~~~----  147 (399)
                      .++.|+|+||||+|+||.+++++|+++|++|++++|+.++....   +.   ..++.++.+|+  +|.+++.++++    
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999985432211   11   13577888888  78777766654    


Q ss_pred             ---CCCEEEECCCCC-CCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 ---GVHTVIDCATGR-PEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 ---~~d~Vi~~a~~~-~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                         ++|+|||+||.. +..           ..+++|+.++.++++++    ++.+..+||++||....  ..+...|+.+
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  170 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVS  170 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHH
Confidence               799999999942 211           22368999999988888    44456799999987653  3344679999


Q ss_pred             HHHHHHHHH-------h-CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          207 KYCTEQFLQ-------D-SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       207 K~~~E~~l~-------~-~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      |...+.+.+       . .++++..++||.+..+......    ..        .....+...+|+|++++.++.++  .
T Consensus       171 K~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~----~~--------~~~~~~~~p~dva~~~~~l~s~~~~~  238 (247)
T 3i1j_A          171 KFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY----PD--------ENPLNNPAPEDIMPVYLYLMGPDSTG  238 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS----TT--------SCGGGSCCGGGGTHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc----cc--------cCccCCCCHHHHHHHHHHHhCchhcc
Confidence            999998763       2 5789999999988765432211    10        11124567899999999999754  2


Q ss_pred             cCCcEEEE
Q 015872          277 INGRTLTF  284 (399)
Q Consensus       277 ~~g~~~~l  284 (399)
                      ..|+.+++
T Consensus       239 itG~~i~~  246 (247)
T 3i1j_A          239 INGQALNA  246 (247)
T ss_dssp             CCSCEEEC
T ss_pred             ccCeeecC
Confidence            35777664

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.75  E-value=4.5e-18  Score=155.74  Aligned_cols=208  Identities=13%  Similarity=0.064  Sum_probs=145.5

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-c--cCCcEEEEccCCCCCcHHHHhc--------
Q 015872           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-R--DWGATVVNADLSKPETIPATLV--------  147 (399)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~--~~~v~~~~~Dl~d~~~l~~~~~--------  147 (399)
                      ++.|+|+||||  +|+||.++++.|+++|++|++++|+..+..+.+ .  ..++.++++|++|++++.++++        
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45689999999  999999999999999999999999753321111 1  1257889999999998887775        


Q ss_pred             --CCCEEEECCCCCC-----CC-----------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCCC-CCCcHHHH
Q 015872          148 --GVHTVIDCATGRP-----EE-----------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDKH-PEVPLMEI  206 (399)
Q Consensus       148 --~~d~Vi~~a~~~~-----~~-----------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~-~~~~y~~~  206 (399)
                        ++|+|||+||...     ..           ...++|+.++.++++++...-  -.+||++||...... ....|+.+
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~Y~as  164 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVA  164 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHH
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCchHHHHHH
Confidence              7999999999433     11           123589999999999987542  148999998776433 34579999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccc---------cccccCCCCcceeceeHHHHHHHHHH
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE---------KSVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      |...+.+.+       ..|+++..++||.+..+............         ...+.........+...+|+|++++.
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~  244 (269)
T 2h7i_A          165 KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA  244 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHH
Confidence            999997763       35899999999998765432211000000         00000000011025677999999999


Q ss_pred             HHhCCc--cCCcEEEEcCCC
Q 015872          271 ALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       271 ~l~~~~--~~g~~~~l~~~~  288 (399)
                      ++.+..  ..|+++.+.|+.
T Consensus       245 L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          245 LLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHSSSCTTCCSEEEEESTTG
T ss_pred             HhCchhccCcceEEEecCCe
Confidence            997633  468899998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.75  E-value=3.2e-17  Score=148.76  Aligned_cols=203  Identities=7%  Similarity=-0.007  Sum_probs=135.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc--cccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--LRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~--l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      ||+|+||||+|+||.++++.|+++|++|++++|+.++....  +...+.++...   |.+++.++++       ++|+||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~---d~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE---CHHHHHHHHHHHHHHhCCCCEEE
Confidence            36799999999999999999999999999999975442211  11112112222   5556655543       799999


Q ss_pred             ECCCCC-CC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH
Q 015872          154 DCATGR-PE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       154 ~~a~~~-~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  215 (399)
                      |+||.. ..           +...++|+.++.++++++.    +.+..+||++||.....  .+...|+.+|...+.+.+
T Consensus        78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  157 (254)
T 1zmt_A           78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLAN  157 (254)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHH
Confidence            999954 22           1234588889888887774    44567999999986643  345679999999998763


Q ss_pred             -------hCCCCEEEEecCcccccccccch-hhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYA-VPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                             ..|+++++++||.+++.....+. .++....    ..+....... .+.+.+|+|++++.++.++.  ..|++
T Consensus       158 ~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~-~~~~p~dvA~~v~~l~s~~~~~~tG~~  236 (254)
T 1zmt_A          158 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ-RLGTQKELGELVAFLASGSCDYLTGQV  236 (254)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS-SCBCHHHHHHHHHHHHTTSCGGGTTCE
T ss_pred             HHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCC-CCcCHHHHHHHHHHHhCcccCCccCCE
Confidence                   25899999999999533211110 0000000    0000000111 36789999999999997643  46899


Q ss_pred             EEEcCCCC
Q 015872          282 LTFSGPRA  289 (399)
Q Consensus       282 ~~l~~~~~  289 (399)
                      +++.++..
T Consensus       237 ~~vdgG~~  244 (254)
T 1zmt_A          237 FWLAGGFP  244 (254)
T ss_dssp             EEESTTCC
T ss_pred             EEECCCch
Confidence            99998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.75  E-value=2.6e-18  Score=156.57  Aligned_cols=203  Identities=15%  Similarity=0.109  Sum_probs=134.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc--cCCcEEEEccCCCCCcHHHHh--------c
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATL--------V  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~--~~~v~~~~~Dl~d~~~l~~~~--------~  147 (399)
                      ++.|+++||||+|+||.++++.|+++|++|++++|+.+.....   +.  ..++.++++|++|++++.+++        .
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4568899999999999999999999999999999974432211   11  124788999999998876654        3


Q ss_pred             CCCEEEECCCC----------C-----CCC---cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC-CCCCcHH
Q 015872          148 GVHTVIDCATG----------R-----PEE---PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK-HPEVPLM  204 (399)
Q Consensus       148 ~~d~Vi~~a~~----------~-----~~~---~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~-~~~~~y~  204 (399)
                      .+|+|||+||.          .     +.+   ...++|+.++..+.+++.    +.+..+||++||..... .+...|+
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~  162 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYG  162 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSHHHH
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCCchH
Confidence            57999999941          1     111   223578888866655553    45667999999986543 3456799


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhh-ccccccccCCCCcce-eceeHHHHHHHHHHHHhCC
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPI-LEEKSVWGTDALTRI-AYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~v~v~Dva~~i~~~l~~~  275 (399)
                      .+|...+.+.+       ..|+++++++||.+..++........ ......... ....+ .+...+|+|++++.++.++
T Consensus       163 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          163 VGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ-FKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH-HHhhhccCCCHHHHHHHHHHHhcCc
Confidence            99999998763       35899999999998766543221100 000000000 00001 2357899999999999775


Q ss_pred             c---cCCcEEEE
Q 015872          276 K---INGRTLTF  284 (399)
Q Consensus       276 ~---~~g~~~~l  284 (399)
                      .   ..|+++..
T Consensus       242 ~~~~itG~~i~~  253 (260)
T 2qq5_A          242 NILSLSGKVLPS  253 (260)
T ss_dssp             TGGGGTTCEEEH
T ss_pred             ccccccceeech
Confidence            3   24555544

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.73  E-value=3.3e-18  Score=154.07  Aligned_cols=207  Identities=15%  Similarity=0.097  Sum_probs=144.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|.++||||++.||..+++.|+++|.+|.+.+|+.+...   +.++..  .+..+++|++|++++.++++       
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999999754322   222222  47889999999988877653       


Q ss_pred             CCCEEEECCCCCC-CC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRP-EE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      ++|++||+||... ..           ...++|+.++..+.+++    ++.+-.+||++||....  ......|..+|..
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            6899999998321 11           12357888876665555    44555699999998653  3344679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcc-cccccc-CCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILE-EKSVWG-TDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      +..+.+       ..|+++..|.||.+..+........-.. ...... ..+..  -+...+|+|.+++.++.+..  ..
T Consensus       164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--R~g~pediA~~v~fLaSd~a~~iT  241 (254)
T 4fn4_A          164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS--RLAEPEDIANVIVFLASDEASFVN  241 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC--CCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC--CCcCHHHHHHHHHHHhCchhcCCc
Confidence            987653       3789999999998875433221110000 000000 00011  25577999999999986543  46


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.||-
T Consensus       242 G~~i~VDGG~  251 (254)
T 4fn4_A          242 GDAVVVDGGL  251 (254)
T ss_dssp             SCEEEESTTG
T ss_pred             CCEEEeCCCc
Confidence            8999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.73  E-value=2.7e-17  Score=148.36  Aligned_cols=196  Identities=14%  Similarity=0.072  Sum_probs=134.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEE-e--cCCCCCccccccC-CcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCL-V--RPRPAPADFLRDW-GATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~--r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      |+|+||||+|+||.++++.|+++|++|+++ +  |+.++........ +.     |+.|.+++.++++       ++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-----IALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-----EECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-----cccCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999 6  8743322211111 22     2335555544442       68999


Q ss_pred             EECCCCCCC---C-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          153 IDCATGRPE---E-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~~~---~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      ||+||....   .           ...++|+.++.++++++.    +.+..+||++||....  ......|+.+|...+.
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  156 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVA  156 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHH
T ss_pred             EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHH
Confidence            999994322   1           134688999988887774    4566799999997654  2345789999999998


Q ss_pred             HHH-------hCCCCEEEEecCccccccc---ccchhh-hcccccccc-CCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLI---GQYAVP-ILEEKSVWG-TDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~---~~~~~~-~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      +.+       ..|++++.++||.+..+..   ...... ...  .+.. .. ... .+...+|+|++++.++.+..  ..
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~-p~~-r~~~pe~vA~~v~~l~s~~~~~~t  232 (244)
T 1zmo_A          157 LVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELR--ERVDRDV-PLG-RLGRPDEMGALITFLASRRAAPIV  232 (244)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHH--HHHHHHC-TTC-SCBCHHHHHHHHHHHHTTTTGGGT
T ss_pred             HHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHH--HHHhcCC-CCC-CCcCHHHHHHHHHHHcCccccCcc
Confidence            763       2589999999998876654   221100 000  0000 00 111 36788999999999997643  46


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.|+.
T Consensus       233 G~~i~vdgG~  242 (244)
T 1zmo_A          233 GQFFAFTGGY  242 (244)
T ss_dssp             TCEEEESTTC
T ss_pred             CCEEEeCCCC
Confidence            8899998863

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.73  E-value=1.6e-17  Score=149.72  Aligned_cols=206  Identities=14%  Similarity=0.086  Sum_probs=144.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +.+.|.++||||++.||..+++.|+++|++|.+.+|+.+...+   .+...  ++..+++|++|++++.++++       
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4567899999999999999999999999999999997543222   22222  57788999999988877663       


Q ss_pred             CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHHH----H-cCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCAK----A-MGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa~----~-~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      ++|++||+||......           ..++|+.++..+.+++.    + .+-.++|++||....  ......|+.+|..
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  165 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG  165 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence            6899999999433222           23578888877766553    2 244699999998653  3344679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhh-hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP-ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      +..+.+       ..|+++..|.||.+..+........ -... .+...-+-.  -+...+|+|.+++.++.+..  ..|
T Consensus       166 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~-~~~~~~Pl~--R~g~pediA~~v~fL~S~~a~~iTG  242 (255)
T 4g81_D          166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDS-WVKSSTPSQ--RWGRPEELIGTAIFLSSKASDYING  242 (255)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHH-HHHHHSTTC--SCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHH-HHHhCCCCC--CCcCHHHHHHHHHHHhCchhCCCcC
Confidence            987653       3789999999999886554332211 0000 000000111  25567999999999886533  468


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++.+.||.
T Consensus       243 ~~i~VDGG~  251 (255)
T 4g81_D          243 QIIYVDGGW  251 (255)
T ss_dssp             CEEEESTTG
T ss_pred             CEEEECCCe
Confidence            999998873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.72  E-value=1e-16  Score=143.10  Aligned_cols=206  Identities=17%  Similarity=0.152  Sum_probs=145.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-ccccccC--CcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRDW--GATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l~~~--~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      +.+.|.++||||++.||..+++.|+++|.+|.+.+|+..+. .+.+...  ++..+++|++|++++.++++  ++|++||
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            35678999999999999999999999999999999975432 2222323  47889999999998887775  5999999


Q ss_pred             CCCCCCC-----------CcchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          155 CATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       155 ~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      +||....           +...++|+.++..+.+++.    +.+ -.+||++||....  ......|..+|..+..+.+ 
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~  165 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKL  165 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHH
Confidence            9993222           2234589888877776543    333 4589999997653  2334579999999987753 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                            ..|+++..|.||.+..+....+.........+...-+-.  -+...+|+|.+++.++.+..  ..|+++.+.||
T Consensus       166 lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg--R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          166 LANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG--RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS--SCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC--CCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence                  378999999999987655433221110000011101111  25567999999999886543  36899999887

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.72  E-value=9e-17  Score=157.40  Aligned_cols=205  Identities=14%  Similarity=0.109  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC--ccccccCCcEEEEccCCCCCcHHHHhc-------C-C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLRDWGATVVNADLSKPETIPATLV-------G-V  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~--~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~-~  149 (399)
                      .+..++++||||+|.||.++++.|+++|++|++++|+....  .......+++++.+|++|.+++.++++       + +
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            34678999999999999999999999999999999863211  112223467899999999999887764       4 9


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc----CCcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~----~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                      |+|||+||.....           ..+++|+.++.++.+++...    +..+||++||...  .......|+.+|...+.
T Consensus       290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~  369 (454)
T 3u0b_A          290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIG  369 (454)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHH
Confidence            9999999943222           23468999999999999876    5569999999754  33455789999998887


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~  283 (399)
                      +.+       ..|++++.+.||.+..++................   .. ..+...+|+|++++.++...  ...|++++
T Consensus       370 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~l-~r~g~pedvA~~v~fL~s~~a~~itG~~i~  445 (454)
T 3u0b_A          370 LAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLN---SL-FQGGQPVDVAELIAYFASPASNAVTGNTIR  445 (454)
T ss_dssp             HHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSB---TT-SSCBCHHHHHHHHHHHHCGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhc---cc-cCCCCHHHHHHHHHHHhCCccCCCCCcEEE
Confidence            653       3689999999999876554322110000000000   11 13457899999999998753  34689999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.|+.
T Consensus       446 vdGG~  450 (454)
T 3u0b_A          446 VCGQA  450 (454)
T ss_dssp             ESSSB
T ss_pred             ECCcc
Confidence            98874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.72  E-value=3.2e-17  Score=154.31  Aligned_cols=195  Identities=14%  Similarity=0.117  Sum_probs=134.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc--------cCCcEEEEccCCCCCcHHHHhcC---
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR--------DWGATVVNADLSKPETIPATLVG---  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~--------~~~v~~~~~Dl~d~~~l~~~~~~---  148 (399)
                      .|+|+||||+|+||.+++++|+++|++|++++|+..+...   .+.        ..++.++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            4689999999999999999999999999998886443221   111        13578999999999999888864   


Q ss_pred             --CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          149 --VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       149 --~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                        +|+|||+||....           ...+++|+.++.++++++    ++.+..+||++||.....  .....|+.+|..
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence              8999999984321           123468999999988885    455678999999986543  344679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhh---ccc---c--ccccCC-C----CcceeceeHHHHHHHHH
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPI---LEE---K--SVWGTD-A----LTRIAYMDTQDIARLTF  269 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~---~~~---~--~~~~~~-~----~~~~~~v~v~Dva~~i~  269 (399)
                      ++.+.+       ..|+++++|+||.+..++........   ...   .  ..+..- .    ....-..+.+|+|++++
T Consensus       162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~  241 (327)
T 1jtv_A          162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL  241 (327)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Confidence            998763       36899999999998866543211100   000   0  000000 0    00001257899999999


Q ss_pred             HHHhCCcc
Q 015872          270 VALRNEKI  277 (399)
Q Consensus       270 ~~l~~~~~  277 (399)
                      .++..+..
T Consensus       242 ~l~~~~~~  249 (327)
T 1jtv_A          242 TALRAPKP  249 (327)
T ss_dssp             HHHHCSSC
T ss_pred             HHHcCCCC
Confidence            99987543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.72  E-value=4.6e-17  Score=151.86  Aligned_cols=177  Identities=11%  Similarity=0.065  Sum_probs=130.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc---CCcEEEEccCCCC-CcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD---WGATVVNADLSKP-ETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~---~~v~~~~~Dl~d~-~~l~~~~~------  147 (399)
                      +..|+|+||||+|+||.+++++|+++|++|++++|+..+..+   .+..   .++.++++|++|+ +++.++++      
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            346889999999999999999999999999999998543221   1211   2588999999998 77666554      


Q ss_pred             -CCCEEEECCCCCCC-----------------------------------------CcchhccHHHHHHHHHHHH----H
Q 015872          148 -GVHTVIDCATGRPE-----------------------------------------EPIKKVDWEGKVALIQCAK----A  181 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------------------------------------~~~~~~n~~~~~~l~~aa~----~  181 (399)
                       ++|+|||+||....                                         +..+++|+.|+..+++++.    +
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence             79999999995421                                         1125789999888887774    3


Q ss_pred             cCCcEEEEecccCCCC---------------------------------------------CCCCcHHHHHHHHHHHHHh
Q 015872          182 MGIQKYVFYSIHNCDK---------------------------------------------HPEVPLMEIKYCTEQFLQD  216 (399)
Q Consensus       182 ~~v~~~V~~Ss~~~~~---------------------------------------------~~~~~y~~~K~~~E~~l~~  216 (399)
                      .+..+||++||.....                                             .+...|+.+|...+.+.+.
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            4556999999975421                                             2335699999999987642


Q ss_pred             -----CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          217 -----SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       217 -----~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                           .++++..++||.+..++....                   .....++.++.++.++..+.
T Consensus       250 la~e~~~i~v~~v~PG~v~T~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          250 LANKIPKFQVNCVCPGLVKTEMNYGI-------------------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHCTTSEEEEECCCSBCSGGGTTC-------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred             HHhhcCCceEEEecCCceecCCcCCC-------------------CCCCHHHHHHHHHHHHhCCC
Confidence                 368999999998876543211                   22466899999999887643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.71  E-value=9.1e-17  Score=158.79  Aligned_cols=204  Identities=16%  Similarity=0.192  Sum_probs=146.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCc------cccccC--CcEEEEccCCCCCcHHHHhcCC---
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPA------DFLRDW--GATVVNADLSKPETIPATLVGV---  149 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~------~~l~~~--~v~~~~~Dl~d~~~l~~~~~~~---  149 (399)
                      ..++||||||+|+||.++++.|+++|++ |++++|+.+...      ..+...  ++.++.+|++|.+++.++++.+   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            3578999999999999999999999996 999999754211      112222  4788999999999999888764   


Q ss_pred             ---CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          150 ---HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       150 ---d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                         |+|||+||.....           ...++|+.|+.++.+++...+.++||++||...  .......|+.+|...+.+
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~l  384 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL  384 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHH
Confidence               9999999943321           223579999999999999988899999999643  234557899999999876


Q ss_pred             H---HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCC
Q 015872          214 L---QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAW  290 (399)
Q Consensus       214 l---~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~  290 (399)
                      .   +..|+++++|+||.+.+..+..   ....  ..+   ....+.+++.+|+++++..++..+..  . +.+..   +
T Consensus       385 a~~~~~~gi~v~~i~pG~~~~~gm~~---~~~~--~~~---~~~g~~~i~~e~~a~~l~~~l~~~~~--~-~~v~~---~  450 (486)
T 2fr1_A          385 AQQRRSDGLPATAVAWGTWAGSGMAE---GPVA--DRF---RRHGVIEMPPETACRALQNALDRAEV--C-PIVID---V  450 (486)
T ss_dssp             HHHHHHTTCCCEEEEECCBC-----------------C---TTTTEECBCHHHHHHHHHHHHHTTCS--S-CEECE---E
T ss_pred             HHHHHhcCCeEEEEECCeeCCCcccc---hhHH--HHH---HhcCCCCCCHHHHHHHHHHHHhCCCC--e-EEEEe---C
Confidence            5   4579999999999887642211   0000  001   11234789999999999999987643  2 22222   4


Q ss_pred             CHHHHHHHH
Q 015872          291 TTQEVITLC  299 (399)
Q Consensus       291 s~~e~~~~~  299 (399)
                      .+..+...+
T Consensus       451 d~~~~~~~~  459 (486)
T 2fr1_A          451 RWDRFLLAY  459 (486)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHhhhh
Confidence            566665544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.71  E-value=1.1e-16  Score=145.31  Aligned_cols=203  Identities=17%  Similarity=0.128  Sum_probs=142.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +++.|+++||||++.||.++++.|+++|++|.+.+|+..+...     ....+++|++|++++.++++       ++|++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP-----EELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC-----TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC-----cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4567999999999999999999999999999999997544221     34478999999988766653       68999


Q ss_pred             EECCCCCCC-------------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC-CC--CCcHHHHHHHHHH
Q 015872          153 IDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK-HP--EVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~~~-------------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~-~~--~~~y~~~K~~~E~  212 (399)
                      ||+||....             +...++|+.++..+.+++    ++.+-.++|++||..... .|  ...|+.+|..++.
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~  162 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALST  162 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHH
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHH
Confidence            999983211             112357888877666555    455666999999976532 22  3568999999987


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhcccc--------cc---ccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--------SV---WGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      +.+       ..|+++..|.||.+..+....+.....+..        ..   +...-..+ -+...+|+|++++.++.+
T Consensus       163 lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-R~g~peevA~~v~fLaS~  241 (261)
T 4h15_A          163 YSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG-RPAKPEEVANLIAFLASD  241 (261)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS-SCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC-CCcCHHHHHHHHHHHhCc
Confidence            653       378999999999987654433221111100        00   00000111 366789999999998865


Q ss_pred             Cc--cCCcEEEEcCCC
Q 015872          275 EK--INGRTLTFSGPR  288 (399)
Q Consensus       275 ~~--~~g~~~~l~~~~  288 (399)
                      ..  ..|+++.+.||-
T Consensus       242 ~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          242 RAASITGAEYTIDGGT  257 (261)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCccCcEEEECCcC
Confidence            33  468999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.71  E-value=2.9e-16  Score=142.05  Aligned_cols=208  Identities=14%  Similarity=0.121  Sum_probs=144.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--ccc--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FLR--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--~l~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ..++.|.++||||++.||.++++.|+++|.+|.+.+|+.+....  .+.  ..++..+++|++|++++.++++       
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35677999999999999999999999999999999998654221  111  2368899999999988766653       


Q ss_pred             CCCEEEECCCCCCC-------C---cchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPE-------E---PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~-------~---~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      ++|++||+||....       +   ...++|+.++..+.+++.    +.+ .++|++||...  .......|+.+|..+.
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~  161 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQL  161 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHH
Confidence            68999999993221       1   123578888777666653    333 58999999764  3334567999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cC
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEK--IN  278 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~  278 (399)
                      .+.+       ..|+++..|.||.+..+....+........    .+...-+-.+ -+...+|+|.+++.++.+..  ..
T Consensus       162 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~-R~g~peeiA~~v~fLaS~~a~~iT  240 (258)
T 4gkb_A          162 ALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGR-RFTTPDEIADTAVFLLSPRASHTT  240 (258)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTT-SCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCC-CCcCHHHHHHHHHHHhCchhcCcc
Confidence            7753       378999999999987655433321111000    0000001111 36678999999999986543  47


Q ss_pred             CcEEEEcCCC
Q 015872          279 GRTLTFSGPR  288 (399)
Q Consensus       279 g~~~~l~~~~  288 (399)
                      |+++.+.||.
T Consensus       241 G~~i~VDGG~  250 (258)
T 4gkb_A          241 GEWLFVDGGY  250 (258)
T ss_dssp             SCEEEESTTT
T ss_pred             CCeEEECCCc
Confidence            8999999874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.70  E-value=9.1e-17  Score=150.54  Aligned_cols=194  Identities=14%  Similarity=0.108  Sum_probs=137.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC---------CCCc---cccccCCcEEEEccCCCCCcHHHHh-
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR---------PAPA---DFLRDWGATVVNADLSKPETIPATL-  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~---------~~~~---~~l~~~~v~~~~~Dl~d~~~l~~~~-  146 (399)
                      .+..|+|+||||+|+||.++++.|+++|++|++.+|..         .+..   ..+...+. ...+|+.|.+++.+++ 
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHH
Confidence            45678999999999999999999999999999987632         1111   11222222 2458999988776654 


Q ss_pred             ------cCCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcH
Q 015872          147 ------VGVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPL  203 (399)
Q Consensus       147 ------~~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y  203 (399)
                            .++|+|||+||.....           ..+++|+.|+.++++++    ++.+..+||++||...  ...+...|
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y  164 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY  164 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHH
Confidence                  3689999999943221           23468999988877776    4556779999999643  23345689


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+|...+.+.+       ..|+++++++||.+ .++....    ..         .....+++.+|+|.+++.++..+.
T Consensus       165 ~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~----~~---------~~~~~~~~p~dvA~~~~~l~s~~~  230 (319)
T 1gz6_A          165 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV----MP---------EDLVEALKPEYVAPLVLWLCHESC  230 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG----SC---------HHHHHHSCGGGTHHHHHHHTSTTC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc----CC---------hhhhccCCHHHHHHHHHHHhCchh
Confidence            999999998763       25899999999876 3322110    00         111245788999999999987643


Q ss_pred             -cCCcEEEEcCCC
Q 015872          277 -INGRTLTFSGPR  288 (399)
Q Consensus       277 -~~g~~~~l~~~~  288 (399)
                       ..|++|++.++.
T Consensus       231 ~~tG~~~~v~GG~  243 (319)
T 1gz6_A          231 EENGGLFEVGAGW  243 (319)
T ss_dssp             CCCSCEEEEETTE
T ss_pred             hcCCCEEEECCCe
Confidence             368899998874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.70  E-value=2.4e-17  Score=150.06  Aligned_cols=204  Identities=13%  Similarity=0.066  Sum_probs=139.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc---
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV---  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~---  147 (399)
                      ++.|+++||||+|+||.++++.|++   +|++|++++|+.+.....   +.    ...+.++++|++|++++.++++   
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            4568899999999999999999999   899999999975432211   11    2247889999999988876653   


Q ss_pred             ------CCC--EEEECCCCCCC-----------C---cchhccHHHHHHHHHHHHHc------CCcEEEEecccCCCC--
Q 015872          148 ------GVH--TVIDCATGRPE-----------E---PIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHNCDK--  197 (399)
Q Consensus       148 ------~~d--~Vi~~a~~~~~-----------~---~~~~~n~~~~~~l~~aa~~~------~v~~~V~~Ss~~~~~--  197 (399)
                            .+|  +|||+||....           +   ...++|+.++.++++++...      +..+||++||.....  
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence                  368  99999994211           1   12358999999999988654      234799999986543  


Q ss_pred             CCCCcHHHHHHHHHHHHHh-----CCCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHH
Q 015872          198 HPEVPLMEIKYCTEQFLQD-----SGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~~-----~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      .+...|+.+|...+.+.+.     .++++..++||.+..++............  ..+....... .+.+.+|+|++++.
T Consensus       164 ~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~p~dvA~~v~~  242 (259)
T 1oaa_A          164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG-ALVDCGTSAQKLLG  242 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTT-CSBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcC-CcCCHHHHHHHHHH
Confidence            3456799999999987642     24889999999887654332211000000  0000000011 46788999999999


Q ss_pred             HHhCCc-cCCcEEEEc
Q 015872          271 ALRNEK-INGRTLTFS  285 (399)
Q Consensus       271 ~l~~~~-~~g~~~~l~  285 (399)
                      ++.+.. ..|+++++.
T Consensus       243 l~~~~~~itG~~i~vd  258 (259)
T 1oaa_A          243 LLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHCCSCTTEEEETT
T ss_pred             HHhhccccCCcEEecc
Confidence            987532 356666553

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.70  E-value=8.7e-17  Score=159.61  Aligned_cols=205  Identities=16%  Similarity=0.225  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCC---c---cccccC--CcEEEEccCCCCCcHHHHhcC--CC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP---A---DFLRDW--GATVVNADLSKPETIPATLVG--VH  150 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~---~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~~--~d  150 (399)
                      ..++||||||+|+||.++++.|+++|+ +|++++|+....   .   ..+...  ++.++.+|++|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            357899999999999999999999999 588889975321   1   122223  378899999999999999875  99


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHc-CCcEEEEecccCC-C-CCCCCcHHHHHHHHHHHHH-
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC-D-KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~-~-~~~~~~y~~~K~~~E~~l~-  215 (399)
                      +|||+||.....           ..+++|+.|+.++.+++... +.++||++||... . ......|+.+|...+.+.+ 
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~  417 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAER  417 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999943322           12357999999999998877 7789999999753 2 2344679999999998764 


Q ss_pred             --hCCCCEEEEecCcccc-cccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCH
Q 015872          216 --DSGLPHVIIRLCGFMQ-GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTT  292 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~  292 (399)
                        ..|+++++++||.+.+ ++........+.         ...+.+++.+|+++++..++..+..   .+.+..   +.+
T Consensus       418 ~~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~---------~~g~~~l~~e~~a~~l~~al~~~~~---~v~v~~---~d~  482 (511)
T 2z5l_A          418 RRAAGLPATSVAWGLWGGGGMAAGAGEESLS---------RRGLRAMDPDAAVDALLGAMGRNDV---CVTVVD---VDW  482 (511)
T ss_dssp             HHTTTCCCEEEEECCBCSTTCCCCHHHHHHH---------HHTBCCBCHHHHHHHHHHHHHHTCS---EEEECC---BCH
T ss_pred             HHHcCCcEEEEECCcccCCcccccccHHHHH---------hcCCCCCCHHHHHHHHHHHHhCCCC---EEEEEe---CCH
Confidence              5799999999988743 222111110000         1123678999999999999987643   233332   456


Q ss_pred             HHHHHHHHH
Q 015872          293 QEVITLCER  301 (399)
Q Consensus       293 ~e~~~~~~~  301 (399)
                      ..+...+..
T Consensus       483 ~~~~~~~~~  491 (511)
T 2z5l_A          483 ERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHhhhcc
Confidence            666665544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.70  E-value=9.7e-17  Score=145.95  Aligned_cols=207  Identities=14%  Similarity=0.103  Sum_probs=143.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|.++||||++.||..+++.|+++|.+|.+.+|+.+...+...+  .++..+++|++|++++.++++       ++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35678999999999999999999999999999999985543322222  257889999999988877653       689


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ++||+||....           +...++|+.++..+.+++...=  -.++|++||....  ......|+.+|..+..+.+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr  185 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFAR  185 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHH
Confidence            99999993221           2234689999988888876431  1379999987643  2334679999999997764


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhc-ccc----ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcE
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPIL-EEK----SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRT  281 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~  281 (399)
                             ..|+++..|.||.+..+....+...-. ...    .+...-+-.  -+...+|+|.+++.++.+..  ..|++
T Consensus       186 ~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg--R~g~peeiA~~v~FLaSd~a~~iTG~~  263 (273)
T 4fgs_A          186 NWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG--RVGRAEEVAAAALFLASDDSSFVTGAE  263 (273)
T ss_dssp             HHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhcCccCCe
Confidence                   368999999999887554333211100 000    000000111  25677999999999996543  46899


Q ss_pred             EEEcCCC
Q 015872          282 LTFSGPR  288 (399)
Q Consensus       282 ~~l~~~~  288 (399)
                      +.+.||-
T Consensus       264 i~VDGG~  270 (273)
T 4fgs_A          264 LFVDGGS  270 (273)
T ss_dssp             EEESTTT
T ss_pred             EeECcCh
Confidence            9998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.69  E-value=7.8e-16  Score=139.68  Aligned_cols=205  Identities=11%  Similarity=0.057  Sum_probs=141.0

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCc---ccc---ccCCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPA---DFL---RDWGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l---~~~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      +++.|+++||||+|  .||..+++.|+++|++|.+.+|+.+...   +.+   ...++..+++|++|++++.++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999987  8999999999999999999999854321   112   22358899999999988776653    


Q ss_pred             ---CCCEEEECCCCCCC------------Ccc---hhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHH
Q 015872          148 ---GVHTVIDCATGRPE------------EPI---KKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLME  205 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~~------------~~~---~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~  205 (399)
                         ++|++||+||....            +.+   .++|+.+...+..++...-  -.+||++||....  ......|+.
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  162 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV  162 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence               69999999983221            111   2356666666666665432  2489999997653  234467999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccchh--hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV--PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +|..++.+.+       ..|+++..|.||.+..........  ...+.  +...-+-.  -+...+|+|.+++.++.+..
T Consensus       163 sKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~--~~~~~Pl~--R~g~peevA~~v~fL~Sd~a  238 (256)
T 4fs3_A          163 AKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKE--IKERAPLK--RNVDQVEVGKTAAYLLSDLS  238 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHH--HHHHSTTS--SCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHH--HHhcCCCC--CCcCHHHHHHHHHHHhCchh
Confidence            9999987653       378999999999887544322110  00000  00000111  25677999999999986543


Q ss_pred             --cCCcEEEEcCCC
Q 015872          277 --INGRTLTFSGPR  288 (399)
Q Consensus       277 --~~g~~~~l~~~~  288 (399)
                        ..|+++.+.||-
T Consensus       239 ~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          239 SGVTGENIHVDSGF  252 (256)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCccCCEEEECcCH
Confidence              468999998873

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.66  E-value=1.6e-17  Score=156.28  Aligned_cols=150  Identities=13%  Similarity=0.092  Sum_probs=114.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCC-CC----ccccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRP-AP----ADFLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~-~~----~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +|||+||||+||||++++..|+++|+       +|+++++... ..    ...+....+.++ +|+.+.+++.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            36899999999999999999999996       8999988531 10    111222122333 68888788899999999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcC-Cc-EEEEecccC----------C-CCCCCCcHHHHHHHHHH
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYSIHN----------C-DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~Ss~~----------~-~~~~~~~y~~~K~~~E~  212 (399)
                      +|||+||..     ...++.+.|+.++.++++++++++ .+ +++++|+..          . ...|..+|+.+|...|+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er  162 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNR  162 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHH
Confidence            999999932     123456799999999999999986 65 788887642          0 12355689999999998


Q ss_pred             HH----HhCCCCEEEEecCcccccc
Q 015872          213 FL----QDSGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       213 ~l----~~~g~~~~ilRp~~~~~~~  233 (399)
                      +.    +..|++.+++|++++||+.
T Consensus       163 ~~~~~a~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          163 AKAQLAKKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred             HHHHHHHHhCcChhheeeeEEEcCC
Confidence            65    4579999999999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.63  E-value=1.2e-14  Score=134.78  Aligned_cols=205  Identities=10%  Similarity=0.061  Sum_probs=135.5

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCcEEEEecC-----------CCCCc--cccccCC----cEEEEcc-----
Q 015872           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRP-----------RPAPA--DFLRDWG----ATVVNAD-----  135 (399)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~lv~~L~~~g~~V~~~~r~-----------~~~~~--~~l~~~~----v~~~~~D-----  135 (399)
                      .++.|+++||||+  |+||.++++.|+++|++|++++|+           ..+..  ..+...+    ...+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            4567899999999  999999999999999999999853           11111  1111101    2333443     


Q ss_pred             ---CC----C--------CCcHHHHhc-------CCCEEEECCCCCC--C-----------CcchhccHHHHHHHHHHHH
Q 015872          136 ---LS----K--------PETIPATLV-------GVHTVIDCATGRP--E-----------EPIKKVDWEGKVALIQCAK  180 (399)
Q Consensus       136 ---l~----d--------~~~l~~~~~-------~~d~Vi~~a~~~~--~-----------~~~~~~n~~~~~~l~~aa~  180 (399)
                         +.    |        ++++.++++       ++|++||+||...  .           +...++|+.++.++++++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               22    2        566666553       6899999998321  1           1123589999999999987


Q ss_pred             HcC--CcEEEEecccCCC-CCC-C-CcHHHHHHHHHHHHH--------hCCCCEEEEecCcccccccccch--hhhcccc
Q 015872          181 AMG--IQKYVFYSIHNCD-KHP-E-VPLMEIKYCTEQFLQ--------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEK  245 (399)
Q Consensus       181 ~~~--v~~~V~~Ss~~~~-~~~-~-~~y~~~K~~~E~~l~--------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~  245 (399)
                      ..-  -.+||++||.... ..+ . ..|+.+|...+.+.+        ..|++++.++||.+..+......  ...... 
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~-  243 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEY-  243 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHH-
T ss_pred             HHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHH-
Confidence            641  1589999987543 223 3 489999999987652        26899999999999866533210  000000 


Q ss_pred             ccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCC
Q 015872          246 SVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPR  288 (399)
Q Consensus       246 ~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~  288 (399)
                       ..... ... .+.+.+|+|++++.++...  ...|+++++.++.
T Consensus       244 -~~~~~-p~~-r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          244 -SYNNA-PIQ-KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             -HHHHS-SSC-CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -hhccC-CCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence             00000 111 3568899999999998753  2368899999874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.59  E-value=8.7e-15  Score=144.24  Aligned_cols=187  Identities=15%  Similarity=0.196  Sum_probs=136.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCC--c----cccccC--CcEEEEccCCCCCcHHHHhc------
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP--A----DFLRDW--GATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~--~----~~l~~~--~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .++||||||+|.||.++++.|+++|+ .|+++.|+....  .    ..+...  .+.++.+|++|.+++.++++      
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999998 788888863221  1    112222  47889999999999988885      


Q ss_pred             CCCEEEECCCCC-CCC-----------cchhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          148 GVHTVIDCATGR-PEE-----------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       148 ~~d~Vi~~a~~~-~~~-----------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      .+|+|||+||.. ...           ..+++|+.|+.++.+++...+..+||++||...  .......|..+|...+.+
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldal  398 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDAL  398 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHH
Confidence            479999999943 221           234689999999999999988889999998753  233456799999999877


Q ss_pred             H---HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          214 L---QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       214 l---~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .   +..|++++.|.||.+.+....... ....  .+ .   ...+..+..++.++++..++..+.
T Consensus       399 a~~~~~~Gi~v~sV~pG~w~~~gm~~~~-~~~~--~l-~---~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          399 AEHRRSLGLTASSVAWGTWGEVGMATDP-EVHD--RL-V---RQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHTTCCCEEEEECEESSSCC-------CH--HH-H---HTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCCeEEEEECCcccCCccccCh-HHHH--HH-H---hcCCCCCCHHHHHHHHHHHHcCCC
Confidence            6   458999999999987643321100 0000  00 0   112346788999999999998754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.57  E-value=1.8e-14  Score=143.44  Aligned_cols=203  Identities=14%  Similarity=0.067  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEE-ecCCCC-------------Ccc---cccc--CCcEEEEccCCCCCc
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCL-VRPRPA-------------PAD---FLRD--WGATVVNADLSKPET  141 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~-~r~~~~-------------~~~---~l~~--~~v~~~~~Dl~d~~~  141 (399)
                      ..+++|||||+|.||.++++.|+++|++ |+++ .|+..+             ..+   .+..  ..+.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            3578999999999999999999999998 5555 676322             111   1111  247889999999999


Q ss_pred             HHHHhcC------CCEEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCCC--C
Q 015872          142 IPATLVG------VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNCD--K  197 (399)
Q Consensus       142 l~~~~~~------~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~~--~  197 (399)
                      +.++++.      +|+|||+||....           ....++|+.|+.++.+++....     ..+||++||....  .
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9888864      6999999994322           1234689999999999998776     7799999987653  3


Q ss_pred             CCCCcHHHHHHHHHHHHH---hCCCCEEEEecCcccccccccc-hhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          198 HPEVPLMEIKYCTEQFLQ---DSGLPHVIIRLCGFMQGLIGQY-AVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l~---~~g~~~~ilRp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .....|+.+|...+.+.+   ..|++++.|.||.+-.++.... ....+.         ...+..+..+++++++..++.
T Consensus       410 ~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~---------~~g~~~l~pee~a~~l~~~l~  480 (525)
T 3qp9_A          410 AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGATGERLR---------RLGLRPLAPATALTALDTALG  480 (525)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHH---------HTTBCCBCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchhhHHHHH---------hcCCCCCCHHHHHHHHHHHHh
Confidence            345679999999998874   3689999999998843332110 000000         111246788999999999998


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHH
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLC  299 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~  299 (399)
                      .+..  .+ .+.   .+.+..+...+
T Consensus       481 ~~~~--~v-~v~---~~dw~~~~~~~  500 (525)
T 3qp9_A          481 HGDT--AV-TIA---DVDWSSFAPGF  500 (525)
T ss_dssp             HTCS--EE-EEC---CBCHHHHHHHH
T ss_pred             CCCC--eE-EEE---eCCHHHHHhhc
Confidence            7642  22 222   24555555544

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.55  E-value=4.1e-14  Score=132.61  Aligned_cols=209  Identities=14%  Similarity=0.082  Sum_probs=119.9

Q ss_pred             CCCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCC-----------CCCc--------------cccccCC----
Q 015872           80 PVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR-----------PAPA--------------DFLRDWG----  128 (399)
Q Consensus        80 ~~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~-----------~~~~--------------~~l~~~~----  128 (399)
                      .++.|+++||||  +|+||.++++.|+++|++|++++|+.           .+..              +.+...+    
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            355689999999  89999999999999999999998641           1100              0111111    


Q ss_pred             -cEEEEccC------------CC--------CCcHHHHhc-------CCCEEEECCCCCC--CC-----------cchhc
Q 015872          129 -ATVVNADL------------SK--------PETIPATLV-------GVHTVIDCATGRP--EE-----------PIKKV  167 (399)
Q Consensus       129 -v~~~~~Dl------------~d--------~~~l~~~~~-------~~d~Vi~~a~~~~--~~-----------~~~~~  167 (399)
                       ..++.+|+            +|        ++++.++++       ++|++||+||...  ..           ..+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence             34555443            22        446665553       6899999998321  11           12358


Q ss_pred             cHHHHHHHHHHHHHcC--CcEEEEecccCCCC-CCC--CcHHHHHHHHHHHHH--------hCCCCEEEEecCccccccc
Q 015872          168 DWEGKVALIQCAKAMG--IQKYVFYSIHNCDK-HPE--VPLMEIKYCTEQFLQ--------DSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       168 n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~-~~~--~~y~~~K~~~E~~l~--------~~g~~~~ilRp~~~~~~~~  234 (399)
                      |+.++.++++++...-  -.+||++||..... .+.  ..|+.+|..++.+.+        ..|+++..|+||.+..++.
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  245 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA  245 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC----
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhh
Confidence            9999999999987641  15899999976532 232  479999999887652        2689999999999876543


Q ss_pred             ccchhh----hcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCCC
Q 015872          235 GQYAVP----ILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       235 ~~~~~~----~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      ......    ..... ..+....... .+...+|+|++++.++.+.  ...|+++.+.|+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          246 SAIGKAGDKTFIDLAIDYSEANAPLQ-KELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhcccccchhhHHHHHHHHhccCCCC-CCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            321100    00000 0000000111 3568899999999998763  34689999998753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.54  E-value=2.4e-14  Score=145.51  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=143.1

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC---------CCCCc---cccccCCcEEEEccCCCCCcHHHHh
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP---------RPAPA---DFLRDWGATVVNADLSKPETIPATL  146 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~---------~~~~~---~~l~~~~v~~~~~Dl~d~~~l~~~~  146 (399)
                      ..++.|+|+||||+|.||.++++.|+++|++|++++|+         .....   ..+...+.. ..+|++|.+++.+++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHH
Confidence            35667899999999999999999999999999999882         22111   112222322 358999998887776


Q ss_pred             c-------CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCc
Q 015872          147 V-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVP  202 (399)
Q Consensus       147 ~-------~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~  202 (399)
                      +       .+|++||+||....           +...++|+.|+.++++++    ++.+..+||++||...  .......
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~  173 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVN  173 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChH
Confidence            5       58999999994322           123468999998888887    5556679999999754  2344568


Q ss_pred             HHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       203 y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      |+.+|...+.+.+       ..|+.+..+.||.+. ........             ......+..+|+|.+++.++.+.
T Consensus       174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~~~~~-------------~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTEGILP-------------DILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-------------HHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhhhccc-------------hhhhhcCCHHHHHHHHHHhcCCC
Confidence            9999999997763       368999999997542 21111100             01113457799999999988764


Q ss_pred             c-cCCcEEEEcCC--------------------CCCCHHHHHHHHHHHhCCCC
Q 015872          276 K-INGRTLTFSGP--------------------RAWTTQEVITLCERLAGQDA  307 (399)
Q Consensus       276 ~-~~g~~~~l~~~--------------------~~~s~~e~~~~~~~~~g~~~  307 (399)
                      . ..|+++++.+|                    ...+.+++.+.+.++.....
T Consensus       240 ~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~  292 (613)
T 3oml_A          240 CEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSK  292 (613)
T ss_dssp             CCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTT
T ss_pred             cCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhcccc
Confidence            2 35777777543                    12577788888888877654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.53  E-value=3.2e-13  Score=126.29  Aligned_cols=208  Identities=16%  Similarity=0.112  Sum_probs=134.7

Q ss_pred             CCCCCeEEEEcC--CChhHHHHHHHHHHCCCcEEEEecCC-----------CCCc--cccccCC----cEEEEccC----
Q 015872           80 PVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR-----------PAPA--DFLRDWG----ATVVNADL----  136 (399)
Q Consensus        80 ~~~~~~vlVtGa--tG~iG~~lv~~L~~~g~~V~~~~r~~-----------~~~~--~~l~~~~----v~~~~~Dl----  136 (399)
                      .++.|+++||||  +|+||.++++.|+++|++|++++|+.           ....  ..+...+    +.++.+|+    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            356689999999  89999999999999999999998642           1111  1111101    24444443    


Q ss_pred             --------C--------CCCcHHHHhc-------CCCEEEECCCCCC--CC-----------cchhccHHHHHHHHHHHH
Q 015872          137 --------S--------KPETIPATLV-------GVHTVIDCATGRP--EE-----------PIKKVDWEGKVALIQCAK  180 (399)
Q Consensus       137 --------~--------d~~~l~~~~~-------~~d~Vi~~a~~~~--~~-----------~~~~~n~~~~~~l~~aa~  180 (399)
                              +        |++++.++++       ++|++||+||...  ..           ..+++|+.++.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                    3        3556666553       6899999998431  11           123579999999999886


Q ss_pred             HcC--CcEEEEecccCCCC-CCC--CcHHHHHHHHHHHHH--------hCCCCEEEEecCcccccccccchhh----hcc
Q 015872          181 AMG--IQKYVFYSIHNCDK-HPE--VPLMEIKYCTEQFLQ--------DSGLPHVIIRLCGFMQGLIGQYAVP----ILE  243 (399)
Q Consensus       181 ~~~--v~~~V~~Ss~~~~~-~~~--~~y~~~K~~~E~~l~--------~~g~~~~ilRp~~~~~~~~~~~~~~----~~~  243 (399)
                      ..-  -.+||++||..... .+.  ..|+.+|...+.+.+        ..|+++..++||.+..+....+...    ...
T Consensus       166 ~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~  245 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFID  245 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHH
T ss_pred             HHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHH
Confidence            541  15899999876532 232  479999999987652        2689999999999876543221100    000


Q ss_pred             cc-ccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCC
Q 015872          244 EK-SVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPR  288 (399)
Q Consensus       244 ~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~  288 (399)
                      .. ..+....... .+...+|+|++++.++...  ...|+++.+.|+.
T Consensus       246 ~~~~~~~~~~p~~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          246 YAIDYSYNNAPLR-RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHHHHHHHSSSC-CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhccCCCC-CCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            00 0000000111 3567899999999998753  2468899998874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.53  E-value=2.1e-13  Score=128.31  Aligned_cols=206  Identities=12%  Similarity=0.029  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCC------------CCCcccccc-----CCcEEEEccCCCC--C-
Q 015872           83 PTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPR------------PAPADFLRD-----WGATVVNADLSKP--E-  140 (399)
Q Consensus        83 ~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~------------~~~~~~l~~-----~~v~~~~~Dl~d~--~-  140 (399)
                      .|+++||||++  .||.+++++|+++|++|++.+|++            .........     ..+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            47899999875  999999999999999999777543            111111111     1257788888877  6 


Q ss_pred             -----------------cHHHHhc-------CCCEEEECCCCC--CC-----------CcchhccHHHHHHHHHHHHHcC
Q 015872          141 -----------------TIPATLV-------GVHTVIDCATGR--PE-----------EPIKKVDWEGKVALIQCAKAMG  183 (399)
Q Consensus       141 -----------------~l~~~~~-------~~d~Vi~~a~~~--~~-----------~~~~~~n~~~~~~l~~aa~~~~  183 (399)
                                       ++.++++       .+|++||+||..  ..           ...+++|+.++..+.+++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             7666653       589999999842  11           1234689999999988876542


Q ss_pred             C--cEEEEecccCCC-CCC-CC-cHHHHHHHHHHHHH-------h-CCCCEEEEecCcccccccccchhhhc--------
Q 015872          184 I--QKYVFYSIHNCD-KHP-EV-PLMEIKYCTEQFLQ-------D-SGLPHVIIRLCGFMQGLIGQYAVPIL--------  242 (399)
Q Consensus       184 v--~~~V~~Ss~~~~-~~~-~~-~y~~~K~~~E~~l~-------~-~g~~~~ilRp~~~~~~~~~~~~~~~~--------  242 (399)
                      .  .+||++||.... ..+ .. .|+.+|...+.+.+       . .|+++..+.||.+..++...+.....        
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  241 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQ  241 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------------
T ss_pred             hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccccc
Confidence            1  489999987643 223 33 89999999987652       3 69999999999987655433211000        


Q ss_pred             ---------------cc-------------------cccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcC
Q 015872          243 ---------------EE-------------------KSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSG  286 (399)
Q Consensus       243 ---------------~~-------------------~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~  286 (399)
                                     .+                   ...+....... .+...+|+|++++.++...  ...|+++.+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~peevA~~v~fL~s~~a~~itG~~i~vdG  320 (329)
T 3lt0_A          242 NKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR-QKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             ------------------------------CHHHHHHHHHHHHSSSC-SCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCccc-CcCCHHHHHHHHHHHhCchhccccCcEEEEcC
Confidence                           00                   00000000011 3567899999999999653  34789999998


Q ss_pred             CCC
Q 015872          287 PRA  289 (399)
Q Consensus       287 ~~~  289 (399)
                      |..
T Consensus       321 G~~  323 (329)
T 3lt0_A          321 GLN  323 (329)
T ss_dssp             TGG
T ss_pred             Cee
Confidence            754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.46  E-value=1.3e-13  Score=146.76  Aligned_cols=214  Identities=14%  Similarity=0.074  Sum_probs=141.9

Q ss_pred             CCCCCCeEEEEcCCCh-hHHHHHHHHHHCCCcEEEEe-cCCCCCcc---cc----c--cCCcEEEEccCCCCCcHHHHhc
Q 015872           79 TPVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLV-RPRPAPAD---FL----R--DWGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~-iG~~lv~~L~~~g~~V~~~~-r~~~~~~~---~l----~--~~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      ++++.|+|+||||+|. ||.++++.|+++|++|++++ |+.+....   .+    .  ...+.++.+|++|.+++.++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            3466789999999998 99999999999999999984 55433221   11    1  1136789999999999887753


Q ss_pred             -------------CCCEEEECCCCCCCC--------------cchhccHHHHHHHHHHHHHcC------CcEEEEecccC
Q 015872          148 -------------GVHTVIDCATGRPEE--------------PIKKVDWEGKVALIQCAKAMG------IQKYVFYSIHN  194 (399)
Q Consensus       148 -------------~~d~Vi~~a~~~~~~--------------~~~~~n~~~~~~l~~aa~~~~------v~~~V~~Ss~~  194 (399)
                                   .+|+|||+||.....              ...++|+.++..++++++...      -.+||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                         489999999942211              123689999998888874321      14899999987


Q ss_pred             CCCCCCCcHHHHHHHHHHHH-H----hCC--CCEEEEecCcccc-cccccchhhhccccccccCCCCcceeceeHHHHHH
Q 015872          195 CDKHPEVPLMEIKYCTEQFL-Q----DSG--LPHVIIRLCGFMQ-GLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIAR  266 (399)
Q Consensus       195 ~~~~~~~~y~~~K~~~E~~l-~----~~g--~~~~ilRp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  266 (399)
                      ........|+.+|..++.+. +    +.+  ++++.+.||++.+ ++...  .....  ....   ...+.+...+|+|+
T Consensus       632 G~~Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~--~e~~~--~~l~---~iplR~~sPEEVA~  704 (1688)
T 2pff_A          632 GTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA--NNIIA--EGIE---KMGVRTFSQKEMAF  704 (1688)
T ss_dssp             TTSSCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT--TTTCS--TTTS---SSSCCCCCCCTTHH
T ss_pred             hccCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC--chHHH--HHHH---hCCCCCCCHHHHHH
Confidence            65546678999999999983 2    122  6777888888763 33221  00000  0000   11112447799999


Q ss_pred             HHHHHHhCCc---cCCcEEEEc--CCCC--CCHHHHHHHH
Q 015872          267 LTFVALRNEK---INGRTLTFS--GPRA--WTTQEVITLC  299 (399)
Q Consensus       267 ~i~~~l~~~~---~~g~~~~l~--~~~~--~s~~e~~~~~  299 (399)
                      +++.++..+.   ..|+.+.+.  |+..  ..+.++...+
T Consensus       705 aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~l  744 (1688)
T 2pff_A          705 NLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL  744 (1688)
T ss_dssp             HHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHH
T ss_pred             HHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHH
Confidence            9999987651   246766653  4422  3455555443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.42  E-value=7.7e-13  Score=145.19  Aligned_cols=211  Identities=14%  Similarity=0.082  Sum_probs=141.3

Q ss_pred             CCCCCCeEEEEcCCCh-hHHHHHHHHHHCCCcEEEEe-cCCCCCcc---cc----c--cCCcEEEEccCCCCCcHHHHhc
Q 015872           79 TPVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLV-RPRPAPAD---FL----R--DWGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~-iG~~lv~~L~~~g~~V~~~~-r~~~~~~~---~l----~--~~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      +.++.|+++||||+|. ||.++++.|+++|++|++++ |+......   .+    .  ...+.++.+|++|.+++.++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3466789999999998 99999999999999999985 54322211   11    1  1247789999999988876652


Q ss_pred             -------------CCCEEEECCCCCCCC--------------cchhccHHHHHHHHHHHHHcCC------cEEEEecccC
Q 015872          148 -------------GVHTVIDCATGRPEE--------------PIKKVDWEGKVALIQCAKAMGI------QKYVFYSIHN  194 (399)
Q Consensus       148 -------------~~d~Vi~~a~~~~~~--------------~~~~~n~~~~~~l~~aa~~~~v------~~~V~~Ss~~  194 (399)
                                   .+|+|||+||.....              ..+++|+.++..++++++....      .+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         489999999943221              1235889999999888754322      4899999987


Q ss_pred             CCCCCCCcHHHHHHHHHHHH-H----hCC--CCEEEEecCccc-cccccc--chhhhccccccccCCCCcceeceeHHHH
Q 015872          195 CDKHPEVPLMEIKYCTEQFL-Q----DSG--LPHVIIRLCGFM-QGLIGQ--YAVPILEEKSVWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       195 ~~~~~~~~y~~~K~~~E~~l-~----~~g--~~~~ilRp~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  264 (399)
                      ........|+.+|..++.++ +    +.+  ++++.+.||++. .++...  ........         ..+.+...+|+
T Consensus       831 g~~gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~---------~plr~~sPEEV  901 (1887)
T 2uv8_A          831 GTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEK---------MGVRTFSQKEM  901 (1887)
T ss_dssp             TCSSCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHT---------TSCCCEEHHHH
T ss_pred             hccCCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHh---------cCCCCCCHHHH
Confidence            65546678999999999872 1    222  889999999887 343221  00111110         11134588999


Q ss_pred             HHHHHHHHhCC-c--cCCcEEEEc--CCCC--CCHHHHHHH
Q 015872          265 ARLTFVALRNE-K--INGRTLTFS--GPRA--WTTQEVITL  298 (399)
Q Consensus       265 a~~i~~~l~~~-~--~~g~~~~l~--~~~~--~s~~e~~~~  298 (399)
                      |.+++.++... .  ..|+.+.+.  ||..  ..+.++...
T Consensus       902 A~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~  942 (1887)
T 2uv8_A          902 AFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  942 (1887)
T ss_dssp             HHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred             HHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence            99999988764 1  246667663  5432  345555443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.41  E-value=2.4e-12  Score=141.04  Aligned_cols=213  Identities=13%  Similarity=0.050  Sum_probs=143.0

Q ss_pred             CCCCCCeEEEEcCCCh-hHHHHHHHHHHCCCcEEEEecCCCCCc--------cccc--cCCcEEEEccCCCCCcHHHHhc
Q 015872           79 TPVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLVRPRPAPA--------DFLR--DWGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~-iG~~lv~~L~~~g~~V~~~~r~~~~~~--------~~l~--~~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      ++++.++||||||+|. ||.++++.|+++|++|+++++......        ..+.  ...+.++.+|++|.+++.++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3466789999999999 999999999999999999864323211        1111  1247789999999988877653


Q ss_pred             -----------CCCEEEECCCCCCCC--------------cchhccHHHHHHHHHHHHHc------CCcEEEEecccCCC
Q 015872          148 -----------GVHTVIDCATGRPEE--------------PIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHNCD  196 (399)
Q Consensus       148 -----------~~d~Vi~~a~~~~~~--------------~~~~~n~~~~~~l~~aa~~~------~v~~~V~~Ss~~~~  196 (399)
                                 .+|+|||+||.....              ..+++|+.++.+++++++..      +-.+||++||....
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                       489999999932211              12358899988887764322      12489999998765


Q ss_pred             CCCCCcHHHHHHHHHHHHH----h---CCCCEEEEecCccc-cccccc--chhhhccccccccCCCCcceeceeHHHHHH
Q 015872          197 KHPEVPLMEIKYCTEQFLQ----D---SGLPHVIIRLCGFM-QGLIGQ--YAVPILEEKSVWGTDALTRIAYMDTQDIAR  266 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~----~---~g~~~~ilRp~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  266 (399)
                      ......|+.+|..++.+.+    +   .+++++.+.||++. .++...  ........         ..+.+...+|+|.
T Consensus       808 ~gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~---------~plr~~sPeEVA~  878 (1878)
T 2uv9_A          808 FGNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK---------LGVRTFSQQEMAF  878 (1878)
T ss_dssp             SSCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT---------TTCCCBCHHHHHH
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh---------cCCCCCCHHHHHH
Confidence            5456789999999988753    1   13889999999887 443221  00011110         1112447899999


Q ss_pred             HHHHHHhCCc---cCCcEEEEc--CCCC--CCHHHHHHHHH
Q 015872          267 LTFVALRNEK---INGRTLTFS--GPRA--WTTQEVITLCE  300 (399)
Q Consensus       267 ~i~~~l~~~~---~~g~~~~l~--~~~~--~s~~e~~~~~~  300 (399)
                      +++.++....   ..|..+.+.  |+..  ..+.++...+.
T Consensus       879 avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr  919 (1878)
T 2uv9_A          879 NLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR  919 (1878)
T ss_dssp             HHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred             HHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence            9998886543   356777663  5432  45666655443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.39  E-value=9.8e-12  Score=125.87  Aligned_cols=211  Identities=15%  Similarity=0.136  Sum_probs=141.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC--------CCc----cccccCCcEEEEccCCCCCcHHHHh-
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP--------APA----DFLRDWGATVVNADLSKPETIPATL-  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~--------~~~----~~l~~~~v~~~~~Dl~d~~~l~~~~-  146 (399)
                      .++.|.++||||++.||..+++.|+++|++|.+.+|+..        ...    +.+...+.+. .+|+.|.+++.+++ 
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVE   83 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHH
Confidence            455688999999999999999999999999999987641        111    1122223333 46888876655443 


Q ss_pred             ------cCCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcH
Q 015872          147 ------VGVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPL  203 (399)
Q Consensus       147 ------~~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y  203 (399)
                            ..+|++||+||....           +..+++|+.|+..+.+++    ++.+-.+||++||...  .......|
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y  163 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANY  163 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHH
Confidence                  469999999993221           123468888887776665    3445569999999754  22334579


Q ss_pred             HHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          204 MEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       204 ~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+|..+..+.+       ..|+++..|.|+ +..+....    ...         +........+|+|.+++.++....
T Consensus       164 ~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~----~~~---------~~~~~~~~pe~vA~~v~~L~s~~~  229 (604)
T 2et6_A          164 ASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES----IMP---------PPMLEKLGPEKVAPLVLYLSSAEN  229 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT----TSC---------HHHHTTCSHHHHHHHHHHHTSSSC
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc----cCC---------hhhhccCCHHHHHHHHHHHhCCcc
Confidence            999999987653       368999999996 33221111    000         000123577999999999987642


Q ss_pred             -cCCcEEEEcCC------------------CCCCHHHHHHHHHHHhCC
Q 015872          277 -INGRTLTFSGP------------------RAWTTQEVITLCERLAGQ  305 (399)
Q Consensus       277 -~~g~~~~l~~~------------------~~~s~~e~~~~~~~~~g~  305 (399)
                       ..|+++.+.++                  ..++..++.+.+.++...
T Consensus       230 ~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          230 ELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             CCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             cCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence             25777777654                  346889999888877543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.34  E-value=7.2e-12  Score=126.86  Aligned_cols=213  Identities=13%  Similarity=0.128  Sum_probs=141.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-CccccccCC--cEEEEccC-CCCCcH-H---HHhcCCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRDWG--ATVVNADL-SKPETI-P---ATLVGVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~l~~~~--v~~~~~Dl-~d~~~l-~---~~~~~~d~  151 (399)
                      +++.|.++||||++.||..+++.|+++|++|++.+|...+ ..+.+...+  +..+.+|+ .+.+.+ .   +.+..+|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            4567899999999999999999999999999998864221 112222223  45567787 554332 2   22347999


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      +||+||....           +..+++|+.|+..+.+++.    +.+-.+||++||....  ......|+.+|..+..+.
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt  478 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLS  478 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHH
Confidence            9999993221           1224588888877766653    4444699999997532  233457999999998765


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-cCCcEEEEcC
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-INGRTLTFSG  286 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-~~g~~~~l~~  286 (399)
                      +       ..|+++..|.||. .......    ....        .. ......+|+|.+++.++.... ..|+++.+.|
T Consensus       479 ~~la~El~~~gIrVn~v~PG~-~T~m~~~----~~~~--------~~-~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdG  544 (604)
T 2et6_A          479 KTMAIEGAKNNIKVNIVAPHA-ETAMTLS----IMRE--------QD-KNLYHADQVAPLLVYLGTDDVPVTGETFEIGG  544 (604)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC-CCCC----------------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             HHHHHHhCccCeEEEEEcCCC-CCccccc----cCch--------hh-ccCCCHHHHHHHHHHHhCCccCCCCcEEEECC
Confidence            3       3789999999973 3222111    1000        00 134567999999998886532 4678888776


Q ss_pred             C-----------------CCCCHHHHHHHHHHHhCCC
Q 015872          287 P-----------------RAWTTQEVITLCERLAGQD  306 (399)
Q Consensus       287 ~-----------------~~~s~~e~~~~~~~~~g~~  306 (399)
                      +                 ..++..++.+.+.+.....
T Consensus       545 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          545 GWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             CeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            5                 2368888888888877654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.32  E-value=2.6e-12  Score=101.51  Aligned_cols=95  Identities=24%  Similarity=0.259  Sum_probs=79.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      +++|+|+|+ |++|..+++.|++.| ++|++++|+..+ .+.+...++.++.+|+.+.+.+.++++++|+|||+++.   
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~---   79 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA-LAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF---   79 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH-HHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG---
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH-HHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc---
Confidence            578999999 999999999999999 999999997443 23334568899999999999999999999999999862   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                              ....++++++.+.|+++|.+.
T Consensus        80 --------~~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           80 --------FLTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             --------GGHHHHHHHHHHTTCEEECCC
T ss_pred             --------hhhHHHHHHHHHhCCCEEEec
Confidence                    225789999999999665543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.28  E-value=1.1e-11  Score=118.29  Aligned_cols=190  Identities=16%  Similarity=0.087  Sum_probs=121.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCCcc---------------ccccC--CcEEEEccCCCCCcHH
Q 015872           82 RPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPAD---------------FLRDW--GATVVNADLSKPETIP  143 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~~~---------------~l~~~--~v~~~~~Dl~d~~~l~  143 (399)
                      .+|++|||||++.||.++++.|++ .|.+|.+++|+.+....               .+...  .+..+.+|++|++++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            368999999999999999999999 99999999997654322               12222  3678999999988766


Q ss_pred             HHh--------cCCCEEEECCCCC-------------CCCcc--------------------------------hhccHH
Q 015872          144 ATL--------VGVHTVIDCATGR-------------PEEPI--------------------------------KKVDWE  170 (399)
Q Consensus       144 ~~~--------~~~d~Vi~~a~~~-------------~~~~~--------------------------------~~~n~~  170 (399)
                      +++        ..+|++||+||..             ....+                                .++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            554        4589999999741             11111                                112222


Q ss_pred             HHH-HHHHHHHHcCC----cEEEEecccCCCCC----CCCcHHHHHHHHHHHHH-------hCCCCEEEEecCccccccc
Q 015872          171 GKV-ALIQCAKAMGI----QKYVFYSIHNCDKH----PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       171 ~~~-~l~~aa~~~~v----~~~V~~Ss~~~~~~----~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~  234 (399)
                      +.. .++.++.....    .++|++||.+....    ....|+.+|..++.+.+       ..|+++..+.||.+-....
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            222 44555443322    37999999875421    12578999999997653       3789999999998875543


Q ss_pred             ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          235 GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      ......-......+.   ..+ ..-..+|+++++..++.+.
T Consensus       300 ~~ip~~~~~~~~~~~---~m~-r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          300 AAIPVMPLYISMVYK---IMK-EKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             GGSTHHHHHHHHHHH---HHH-HTTCCCCHHHHHHHHHHHT
T ss_pred             hcCCCChHHHHHHHh---hhc-CCcChHHHHHHHHHHhcch
Confidence            221100000000000   000 1122379999999988764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.23  E-value=3.8e-11  Score=125.22  Aligned_cols=188  Identities=16%  Similarity=0.225  Sum_probs=130.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCCc-EEEEecCCCC---Ccc---ccccC--CcEEEEccCCCCCcHHHHhc----
Q 015872           82 RPTSILVVGATGTLGRQIVRRAL-DEGYD-VRCLVRPRPA---PAD---FLRDW--GATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~-~~g~~-V~~~~r~~~~---~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ..++++||||+|.||..+++.|+ ++|.+ |++++|+...   ..+   .+...  .+.++.+|++|.+++.++++    
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            35789999999999999999999 78984 8889997322   111   22223  37789999999999988875    


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~  212 (399)
                        .+|+|||+||.....           ...++|+.|+.++.+++.. .. +||++||...  .......|..+|...+.
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~~~YaAaka~~~a  686 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQGNYAAANSFLDA  686 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSCHHHHHHHHHHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCCHHHHHHHHHHHH
Confidence              369999999943222           2235899999999998732 33 8999999754  33445679999988876


Q ss_pred             HH---HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          213 FL---QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       213 ~l---~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.   +..|++++.|.||.+.+..+..........  .+.   ...+..+..+++.+.+..++..+.
T Consensus       687 lA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~--~~~---~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          687 LAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQD--RLA---RSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHH--HHH---HTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCeEEEEECCeECcchhhccccHHHHH--HHH---hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            54   458999999999988644322111000000  000   111245666888888888887654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.21  E-value=1.1e-10  Score=112.21  Aligned_cols=198  Identities=12%  Similarity=-0.006  Sum_probs=124.3

Q ss_pred             CCCCeEEEEcCCChhHHH--HHHHHHHCCCcEEEEecCCCCCc-----------ccc----cc--CCcEEEEccCCCCCc
Q 015872           81 VRPTSILVVGATGTLGRQ--IVRRALDEGYDVRCLVRPRPAPA-----------DFL----RD--WGATVVNADLSKPET  141 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~--lv~~L~~~g~~V~~~~r~~~~~~-----------~~l----~~--~~v~~~~~Dl~d~~~  141 (399)
                      ...|+++||||++.||.+  +++.|++.|++|++++|+.....           ..+    ..  ..+..+.+|++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            456899999999999999  99999999999999999755422           111    11  247789999999988


Q ss_pred             HHHHhc-------CCCEEEECCCCC-------------CCCcc------------------------h--------hccH
Q 015872          142 IPATLV-------GVHTVIDCATGR-------------PEEPI------------------------K--------KVDW  169 (399)
Q Consensus       142 l~~~~~-------~~d~Vi~~a~~~-------------~~~~~------------------------~--------~~n~  169 (399)
                      +.++++       .+|++||+||..             ....+                        .        ++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            776653       589999999852             10011                        0        1122


Q ss_pred             HHHH-HHHHHHHHcCC----cEEEEecccCCCC--CCC--CcHHHHHHHHHHHH-------Hh-CCCCEEEEecCccccc
Q 015872          170 EGKV-ALIQCAKAMGI----QKYVFYSIHNCDK--HPE--VPLMEIKYCTEQFL-------QD-SGLPHVIIRLCGFMQG  232 (399)
Q Consensus       170 ~~~~-~l~~aa~~~~v----~~~V~~Ss~~~~~--~~~--~~y~~~K~~~E~~l-------~~-~g~~~~ilRp~~~~~~  232 (399)
                      .+.. .++.++...+.    .++|.+||.+...  ...  ..|+.+|..++.+.       .. .|+++..+.||.+-..
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            2222 33444443332    3799999876532  223  68999999998764       34 6899999999988754


Q ss_pred             ccccchh-h-hcc-ccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEc
Q 015872          233 LIGQYAV-P-ILE-EKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFS  285 (399)
Q Consensus       233 ~~~~~~~-~-~~~-~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~  285 (399)
                      ....... + ... -..+..       ..-..+|+++++..++.+.-..|....+.
T Consensus       298 ~s~~ip~~p~y~~~~~~~mk-------~~G~~E~v~e~~~~L~sd~~~~g~~~~~D  346 (418)
T 4eue_A          298 ASAYIPTFPLYAAILYKVMK-------EKNIHENCIMQIERMFSEKIYSNEKIQFD  346 (418)
T ss_dssp             HHHTSTTHHHHHHHHHHHHH-------HTTCCCCHHHHHHHHHHHTTSSSSCCCCC
T ss_pred             hhhcCCCCcHHHHHHHHHHh-------hcCChHHHHHHHHHHhhccccCCCccccC
Confidence            3322100 0 000 000000       11123799999999987644434333333

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.20  E-value=2.7e-10  Score=107.72  Aligned_cols=189  Identities=16%  Similarity=0.108  Sum_probs=121.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCCcc---------------ccccC--CcEEEEccCCCCCcH
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPAD---------------FLRDW--GATVVNADLSKPETI  142 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~~~---------------~l~~~--~v~~~~~Dl~d~~~l  142 (399)
                      ...|+++||||++.||.++++.|++ .|.+|.+++|+.+....               .+...  .+..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3468899999999999999999999 99999999987554321               12222  467899999999887


Q ss_pred             HHHhc-------CCCEEEECCCCC-------------CCCc-----------------------------c---hhccHH
Q 015872          143 PATLV-------GVHTVIDCATGR-------------PEEP-----------------------------I---KKVDWE  170 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~~~-------------~~~~-----------------------------~---~~~n~~  170 (399)
                      .++++       .+|++||+||..             ....                             +   .++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            76653       689999999842             0011                             1   123333


Q ss_pred             HHH-HHHHHHHHcCC----cEEEEecccCCCC--CCC--CcHHHHHHHHHHHHH-------hC-CCCEEEEecCcccccc
Q 015872          171 GKV-ALIQCAKAMGI----QKYVFYSIHNCDK--HPE--VPLMEIKYCTEQFLQ-------DS-GLPHVIIRLCGFMQGL  233 (399)
Q Consensus       171 ~~~-~l~~aa~~~~v----~~~V~~Ss~~~~~--~~~--~~y~~~K~~~E~~l~-------~~-g~~~~ilRp~~~~~~~  233 (399)
                      +.. .++.++.....    .++|.+||.+...  ...  ..|+.+|..++.+.+       .. |+++..+.||.+-...
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            333 34444433221    3799999987532  222  689999999997653       36 9999999999887543


Q ss_pred             cccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          234 IGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       234 ~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      ...... +.... .++.   ..+ .+-..+|+++++..++.+
T Consensus       285 s~~ip~~p~y~~-~l~~---~mk-r~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          285 SSAIPMMPLYLS-LLFK---VMK-EKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHTSTTHHHHHH-HHHH---HHH-HHTCCCCHHHHHHHHHHH
T ss_pred             hhcCCCCcHHHH-HHHH---HHh-cCCCcHHHHHHHHHHHhc
Confidence            221110 00000 0000   000 122337999999999875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.02  E-value=3.7e-10  Score=105.60  Aligned_cols=110  Identities=13%  Similarity=0.065  Sum_probs=79.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-ccccccCCcE-EEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-ADFLRDWGAT-VVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-~~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++|||+||||+|++|+.++..|+++|  ++|++++++.... ...+...... .+.+ +.+.+++.++++++|+|||++|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence            34789999999999999999999998  8999999764310 0111111111 1122 2223457788999999999998


Q ss_pred             CC-----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          158 GR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       158 ~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      ..     ...++...|+.+++++++++.+.+.+.+|+++|
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            22     234556799999999999999999887777775

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.01  E-value=1.5e-10  Score=108.53  Aligned_cols=150  Identities=11%  Similarity=0.059  Sum_probs=99.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecC----CCCC---ccccccCCcEEEEccCCCCCcHHHHhc
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRP----RPAP---ADFLRDWGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~----~~~~---~~~l~~~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      +++||+||||+|++|++++..|+..|+       +|++++++    .++.   ...+......+ ..|+...+++.++++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence            357899999999999999999999885       89998876    2111   11122211111 246666677899999


Q ss_pred             CCCEEEECCCCCC-----CCcchhccHHHHHHHHHHHHHcC-Cc-EEEEecccC---------CC-C-CCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYSIHN---------CD-K-HPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~-v~-~~V~~Ss~~---------~~-~-~~~~~y~~~K~~  209 (399)
                      ++|+|||+||...     ..++...|+.+++++++++.+++ .+ +||++|...         .. . ++...++.++..
T Consensus        83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld  162 (329)
T 1b8p_A           83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLD  162 (329)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHH
Confidence            9999999999321     12345689999999999999985 66 899998521         11 1 122345555544


Q ss_pred             HHHH---H-HhCCCCEEEEecCccccc
Q 015872          210 TEQF---L-QDSGLPHVIIRLCGFMQG  232 (399)
Q Consensus       210 ~E~~---l-~~~g~~~~ilRp~~~~~~  232 (399)
                      ..++   + +..|++...++...++|+
T Consensus       163 ~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          163 HNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             HHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             HHHHHHHHHHHhCcCHHHceEEEEEec
Confidence            3322   2 446777666665445553

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.01  E-value=1.1e-09  Score=89.33  Aligned_cols=100  Identities=14%  Similarity=0.171  Sum_probs=76.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRP  160 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~  160 (399)
                      ++++|+|+|+ |.+|..+++.|.+.|++|++++|+... .+.+...+...+.+|..|.+.+.++ ++++|+||++++.. 
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-   81 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK-VNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-   81 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH-HHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC-
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc-
Confidence            3567999998 999999999999999999999997433 2334444677889999987777765 67899999998731 


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                              ......++..+++.+++++|..++
T Consensus        82 --------~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           82 --------IQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             --------HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             --------hHHHHHHHHHHHHcCCCeEEEEeC
Confidence                    122345777888888887776553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.93  E-value=3.4e-09  Score=122.29  Aligned_cols=148  Identities=16%  Similarity=0.192  Sum_probs=110.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCc------cccccC--CcEEEEccCCCCCcHHHHhc-----
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPA------DFLRDW--GATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~------~~l~~~--~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ..++++||||+|.||..+++.|+++|.+ |++++|+..+..      +.+...  .+.++.+|++|.+++.++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4578999999999999999999999997 777888754431      112222  36778899999988877653     


Q ss_pred             -CCCEEEECCCCC-----------CCCcchhccHHHHHHHHHHHHHc--CCcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          148 -GVHTVIDCATGR-----------PEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       148 -~~d~Vi~~a~~~-----------~~~~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                       .+|+|||+||..           ......++|+.|+.++.+++...  ...+||++||...  .......|+.+|...+
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~ 2042 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAME 2042 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHH
Confidence             589999999831           12334578999999998887654  2369999999754  2334567999999999


Q ss_pred             HHHH---hCCCCEEEEecCcc
Q 015872          212 QFLQ---DSGLPHVIIRLCGF  229 (399)
Q Consensus       212 ~~l~---~~g~~~~ilRp~~~  229 (399)
                      .+.+   ..|++...+..+.+
T Consensus      2043 ~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2043 RICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHTTSCCCEEEECCB
T ss_pred             HHHHHHHHCCCcEEEEEccCc
Confidence            8764   67888888877654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.87  E-value=4.5e-09  Score=85.76  Aligned_cols=95  Identities=19%  Similarity=0.242  Sum_probs=73.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      +++|+|+|+ |++|+++++.|.++|++|++++++++ ..+.+...++.++.+|.+|++.+.++ +.++|+||.+.+.   
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~-~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~---   80 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKE-KIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD---   80 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH-HHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC---
Confidence            468999998 99999999999999999999999743 33344456889999999999888776 4689999998761   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                             ......++..+++.+..++|-
T Consensus        81 -------~~~n~~~~~~a~~~~~~~iia  101 (141)
T 3llv_A           81 -------DEFNLKILKALRSVSDVYAIV  101 (141)
T ss_dssp             -------HHHHHHHHHHHHHHCCCCEEE
T ss_pred             -------HHHHHHHHHHHHHhCCceEEE
Confidence                   123445677777777545543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.85  E-value=4.1e-09  Score=97.98  Aligned_cols=108  Identities=13%  Similarity=0.095  Sum_probs=73.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEec--CCCCCc---cccccC-CcEEEEccCCC-CCcHHHHhcCCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVR--PRPAPA---DFLRDW-GATVVNADLSK-PETIPATLVGVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r--~~~~~~---~~l~~~-~v~~~~~Dl~d-~~~l~~~~~~~d~Vi~  154 (399)
                      |||+||||+|++|++++..|+.+|+  ++.++++  +.++..   ..+... ...-...++.+ .+++.++++++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            4899999999999999999998884  6777877  421110   001110 00000112222 1246778999999999


Q ss_pred             CCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          155 CATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       155 ~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      +||...     ...+...|+.+++++++++++++ +.+|+++|
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            998321     13456789999999999999999 87777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.82  E-value=6.7e-09  Score=101.31  Aligned_cols=127  Identities=18%  Similarity=0.205  Sum_probs=86.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      |++++|+|+| +|++|+++++.|++.|++|++++|+.++........ ++..+.+|+.|.+++.++++++|+|||+++..
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~   79 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   79 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence            3467899998 799999999999999999999999754332222222 36788999999888999999999999999842


Q ss_pred             CCCc-----chh-cc-------HHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHH
Q 015872          160 PEEP-----IKK-VD-------WEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       160 ~~~~-----~~~-~n-------~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~  213 (399)
                      ....     +.. .|       ...+.+++++|+++|++   +++..+.  .|.......+..+++.
T Consensus        80 ~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~---~i~g~g~--~pg~~~~~a~~li~q~  141 (450)
T 1ff9_A           80 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT---VMNEIGL--DPGIDHLYAIKTIEEV  141 (450)
T ss_dssp             CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE---EECSCBB--TTBHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe---EEeCCCC--cCchHHHHHHHHHHHh
Confidence            2110     000 11       24578899999999983   3444443  2333344445555554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.81  E-value=1.3e-08  Score=82.61  Aligned_cols=122  Identities=17%  Similarity=0.204  Sum_probs=85.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~  160 (399)
                      .|+|+|+|+ |++|..+++.|.+.|++|++++|+.... +.+. ..++.++.+|..+.+.+.++ ++++|+||++.+.. 
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-   80 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-KKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-   80 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-HHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-
Confidence            368999997 9999999999999999999999974332 2232 24778889999887777654 67899999997521 


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCcccc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ  231 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~  231 (399)
                           ..    ...+.+.+++.+.+++|..++..       .+       ++.+++.|++++ +.|..+..
T Consensus        81 -----~~----~~~~~~~~~~~~~~~ii~~~~~~-------~~-------~~~l~~~g~~~v-~~p~~~~~  127 (140)
T 1lss_A           81 -----EV----NLMSSLLAKSYGINKTIARISEI-------EY-------KDVFERLGVDVV-VSPELIAA  127 (140)
T ss_dssp             -----HH----HHHHHHHHHHTTCCCEEEECSST-------TH-------HHHHHHTTCSEE-ECHHHHHH
T ss_pred             -----hH----HHHHHHHHHHcCCCEEEEEecCH-------hH-------HHHHHHcCCCEE-ECHHHHHH
Confidence                 11    23566778888877777544211       11       345667787744 77755543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.77  E-value=5.4e-08  Score=112.51  Aligned_cols=211  Identities=17%  Similarity=0.066  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCcEEEEecCCCC-----Cc---cccccC--CcEEEEccCCCCCcHHHHh---
Q 015872           81 VRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLVRPRPA-----PA---DFLRDW--GATVVNADLSKPETIPATL---  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~-iG~~lv~~L~~~g~~V~~~~r~~~~-----~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~---  146 (399)
                      ++.|.++||||++. ||..+++.|++.|.+|++.+|+.+.     ..   ..+...  .+..+.+|++|++++.+++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            66789999999999 9999999999999999999997554     11   112222  3567899999998877663   


Q ss_pred             --------cCCCEEEECCCC----C---------CCCcc-------hhccHHHHHHHHHHHHH----cCCc---EEE-Ee
Q 015872          147 --------VGVHTVIDCATG----R---------PEEPI-------KKVDWEGKVALIQCAKA----MGIQ---KYV-FY  190 (399)
Q Consensus       147 --------~~~d~Vi~~a~~----~---------~~~~~-------~~~n~~~~~~l~~aa~~----~~v~---~~V-~~  190 (399)
                              .++|++||+||.    .         ..+.+       .++|+.++..++.++..    .+..   .+| ..
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    248999999985    1         11222       45677777666665543    3321   223 33


Q ss_pred             cccCCCCCCCCcHHHHHHHHHHHHH----h--C--CCCEEEEecCcccc-cccccc--hhhhccccccccCCCCcceece
Q 015872          191 SIHNCDKHPEVPLMEIKYCTEQFLQ----D--S--GLPHVIIRLCGFMQ-GLIGQY--AVPILEEKSVWGTDALTRIAYM  259 (399)
Q Consensus       191 Ss~~~~~~~~~~y~~~K~~~E~~l~----~--~--g~~~~ilRp~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~v  259 (399)
                      |+..........|+.+|..++.+.+    +  .  ++.++.+.||++-+ ......  .......   .    .  ....
T Consensus      2294 ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~---~----~--~r~~ 2364 (3089)
T 3zen_D         2294 SPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEE---A----G--VTTY 2364 (3089)
T ss_dssp             CSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGG---G----S--CBCE
T ss_pred             CcccccCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHh---c----C--CCCC
Confidence            3322222234579999999987653    3  2  46678888988762 221110  0000000   0    1  1223


Q ss_pred             eHHHHHHHHHHHHhCCc---cCCc--EEEEcCCC---CCCHHHHHHHHH
Q 015872          260 DTQDIARLTFVALRNEK---INGR--TLTFSGPR---AWTTQEVITLCE  300 (399)
Q Consensus       260 ~v~Dva~~i~~~l~~~~---~~g~--~~~l~~~~---~~s~~e~~~~~~  300 (399)
                      ..+|+|.+++.++....   ..+.  ...+.|+-   .+.+.++...+.
T Consensus      2365 ~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2365 TTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             EHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             CHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            78999999999876432   1223  34444544   357888887653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.77  E-value=2.5e-08  Score=82.55  Aligned_cols=98  Identities=15%  Similarity=0.181  Sum_probs=73.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc---ccCCcEEEEccCCCCCcHHHH-hcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDWGATVVNADLSKPETIPAT-LVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l---~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a  156 (399)
                      |..++|+|+|+ |.+|+.+++.|.+.|++|++++++.+...+.+   ...++.++.+|.+|++.+.++ ++++|+||.+.
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            34578999996 99999999999999999999999742211112   134789999999999988877 88999999997


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHc-CCcEEEE
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVF  189 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~  189 (399)
                      +..          .....+...+++. +..++|.
T Consensus        80 ~~d----------~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           80 DND----------ADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             SCH----------HHHHHHHHHHHHHTSSSCEEE
T ss_pred             CCh----------HHHHHHHHHHHHHCCCCEEEE
Confidence            621          2234556667766 5555554

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.76  E-value=3.2e-09  Score=98.24  Aligned_cols=102  Identities=13%  Similarity=-0.020  Sum_probs=72.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEec--CCCCCc---ccccc-----CCcEEEEccCCCCCcHHHHhcCCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVR--PRPAPA---DFLRD-----WGATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r--~~~~~~---~~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      |||+||||+|++|++++..|+..|+  ++.++++  +.++..   ..+..     ..+++.. +     . .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~-----~-~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G-----G-YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C-----C-GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C-----C-HHHhCCCCE
Confidence            5899999999999999999999885  6777877  422110   01111     1222222 1     1 456899999


Q ss_pred             EEECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          152 VIDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       152 Vi~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      |||+++... +    .++...|+.+++++++++++++.+.+|+++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999998322 1    2455789999999999999998887787775

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.72  E-value=5.1e-09  Score=96.25  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=64.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc---cc-CCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD-WGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l---~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .++.++++||||+|.+|++++..|++.|++|++++|+.++.....   .. .++.++.+|++|.+++.++++++|+|||+
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            456789999999999999999999999999999999744322111   11 25677889999999999999999999999


Q ss_pred             CCC
Q 015872          156 ATG  158 (399)
Q Consensus       156 a~~  158 (399)
                      ++.
T Consensus       196 ag~  198 (287)
T 1lu9_A          196 GAI  198 (287)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            973

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.70  E-value=1.6e-07  Score=77.84  Aligned_cols=121  Identities=17%  Similarity=0.215  Sum_probs=85.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~  159 (399)
                      ..++|+|+|+ |.+|..+++.|.+.|++|++++|+.+. .+.+. ..++.++.+|..+.+.+.++ +.++|+||.+.+..
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD   95 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence            3578999996 999999999999999999999998544 33344 55788888998887767665 67899999998621


Q ss_pred             CCCcchhccHHHHHHHHHHHHH-cCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCccc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKA-MGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFM  230 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~-~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~  230 (399)
                                .....+++.++. .+..++|...+...       +       ++.+++.|++  ++.|..+.
T Consensus        96 ----------~~~~~~~~~~~~~~~~~~iv~~~~~~~-------~-------~~~l~~~G~~--vi~p~~~~  141 (155)
T 2g1u_A           96 ----------STNFFISMNARYMFNVENVIARVYDPE-------K-------IKIFEENGIK--TICPAVLM  141 (155)
T ss_dssp             ----------HHHHHHHHHHHHTSCCSEEEEECSSGG-------G-------HHHHHTTTCE--EECHHHHH
T ss_pred             ----------HHHHHHHHHHHHHCCCCeEEEEECCHH-------H-------HHHHHHCCCc--EEcHHHHH
Confidence                      223456667776 56666665543221       1       2456667777  66665444

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.64  E-value=4e-08  Score=94.64  Aligned_cols=96  Identities=14%  Similarity=0.209  Sum_probs=74.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCcccc---cc---CCcEEEEccCCCCCcHHHHhcC--CCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFL---RD---WGATVVNADLSKPETIPATLVG--VHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~~l---~~---~~v~~~~~Dl~d~~~l~~~~~~--~d~  151 (399)
                      |++|+|+|| |++|+.+++.|++.|   .+|.+.+|+.++.....   ..   .++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            368999999 999999999999998   38999999854432221   11   2588999999999999999987  999


Q ss_pred             EEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       152 Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      |||+++..           ....++++|.+.|+ +++-++
T Consensus        80 Vin~ag~~-----------~~~~v~~a~l~~g~-~vvD~a  107 (405)
T 4ina_A           80 VLNIALPY-----------QDLTIMEACLRTGV-PYLDTA  107 (405)
T ss_dssp             EEECSCGG-----------GHHHHHHHHHHHTC-CEEESS
T ss_pred             EEECCCcc-----------cChHHHHHHHHhCC-CEEEec
Confidence            99999721           12578889999997 444343

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.63  E-value=5.6e-08  Score=82.95  Aligned_cols=97  Identities=15%  Similarity=0.152  Sum_probs=74.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH--hcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT--LVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~--~~~~d~Vi~~a~  157 (399)
                      +..++|+|+|+ |.+|..+++.|.+. |++|++++|+++. .+.+...++.++.+|.++++.+.++  ++++|+||.+.+
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~-~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEA-AQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHH-HHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHH-HHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            34568999995 99999999999999 9999999998443 3335556888999999998878776  788999999876


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcC-CcEEEE
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVF  189 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~-v~~~V~  189 (399)
                      .          ......++..+++.+ ..++|.
T Consensus       115 ~----------~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          115 H----------HQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             S----------HHHHHHHHHHHHHTTCCSEEEE
T ss_pred             C----------hHHHHHHHHHHHHHCCCCEEEE
Confidence            2          123445667777777 335443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.60  E-value=7.3e-08  Score=91.64  Aligned_cols=94  Identities=23%  Similarity=0.213  Sum_probs=74.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ++|||+|+|| |++|+.+++.|.+ .++|.+.+|+..+... + ...+..+..|+.|.+++.++++++|+||++++..  
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~-~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~--   88 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK-V-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF--   88 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH-H-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG--
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH-H-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc--
Confidence            3578999998 9999999998865 6899999997443222 2 2357788999999999999999999999998731  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                               ....++++|.++|+ ++|=+|
T Consensus        89 ---------~~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           89 ---------LGFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             ---------GHHHHHHHHHHHTC-EEEECC
T ss_pred             ---------ccchHHHHHHhcCc-ceEeee
Confidence                     13478999999997 777655

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.53  E-value=5.1e-08  Score=90.97  Aligned_cols=109  Identities=12%  Similarity=0.073  Sum_probs=77.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--c-----EEEEecCCC--CC---ccccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--D-----VRCLVRPRP--AP---ADFLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~-----V~~~~r~~~--~~---~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      ++||+||||+|++|++++..|+..|.  +     +.+++++..  ..   ...+.+....+. .++...+...++++++|
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daD   81 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLD   81 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCC
Confidence            47899999999999999999998875  5     888888531  10   111221111111 22322345778899999


Q ss_pred             EEEECCCC-----CCCCcchhccHHHHHHHHHHHHHcCCc--EEEEecc
Q 015872          151 TVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSI  192 (399)
Q Consensus       151 ~Vi~~a~~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~Ss  192 (399)
                      +||++||.     ....+..+.|+..++++++++.+++.+  +++.+|-
T Consensus        82 vVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999982     234456678999999999999999875  5777773

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.51  E-value=1.2e-07  Score=92.66  Aligned_cols=103  Identities=13%  Similarity=0.191  Sum_probs=74.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++++|+|+|+ |++|+.+++.|++. |++|++++|+.++........++..+.+|+.|.+++.++++++|+|||+++..
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence            34578999997 99999999999998 79999999975443322222367788999999888999999999999999832


Q ss_pred             CC-----------CcchhccH--HHHHHHHHHHHHcCC
Q 015872          160 PE-----------EPIKKVDW--EGKVALIQCAKAMGI  184 (399)
Q Consensus       160 ~~-----------~~~~~~n~--~~~~~l~~aa~~~~v  184 (399)
                      ..           ..+.+.++  ..+..++++|++.|+
T Consensus       100 ~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A          100 FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            10           11112221  335678888888887

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.48  E-value=2.5e-07  Score=81.29  Aligned_cols=95  Identities=19%  Similarity=0.294  Sum_probs=72.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~  162 (399)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++.........++.++.+|.+|++.+.++ ++++|+||.+.+..   
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d---   76 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD---   76 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc---
Confidence            57999997 99999999999999999999999754333222335789999999999988876 78999999887521   


Q ss_pred             cchhccHHHHHHHHHHHHH-cCCcEEEE
Q 015872          163 PIKKVDWEGKVALIQCAKA-MGIQKYVF  189 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~-~~v~~~V~  189 (399)
                             .....++..+++ .+..++|-
T Consensus        77 -------~~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           77 -------EVNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             -------HHHHHHHHHHHHTSCCCEEEE
T ss_pred             -------HHHHHHHHHHHHHcCCCeEEE
Confidence                   123345566665 56767664

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.42  E-value=2.3e-07  Score=86.07  Aligned_cols=105  Identities=16%  Similarity=0.147  Sum_probs=73.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-ccccccCCcEEEEccCCC---CCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-ADFLRDWGATVVNADLSK---PETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-~~~l~~~~v~~~~~Dl~d---~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||+|+||+|++|+.++..|+..|  ++|.+++++..+. ...+.....   .+++..   .+++.++++++|+||+++|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~---~~~l~~~~~t~d~~~a~~~aDvVvi~ag   77 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET---RATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS---SCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc---CceEEEecCCCCHHHHhCCCCEEEECCC
Confidence            589999999999999999999888  7999999975110 011111110   012211   1357778999999999998


Q ss_pred             CCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ...     ..+....|+...+.+++.+.+.... ++|++|
T Consensus        78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            321     2344567889999999999988754 777765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.38  E-value=1.4e-06  Score=70.67  Aligned_cols=73  Identities=21%  Similarity=0.253  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~  157 (399)
                      .++|+|+|+ |.+|..+++.|.+.|++|++++++++ ..+.+...++.++.+|.++++.+.++ +.++|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~-~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRT-RVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH-HHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            467999997 99999999999999999999999844 33445557899999999999888765 568999999876

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.35  E-value=4.1e-06  Score=78.58  Aligned_cols=77  Identities=12%  Similarity=0.123  Sum_probs=61.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHH-HCCCcEEEEecCCCCCcccc---------------cc--CCcEEEEccCCCCCcH
Q 015872           81 VRPTSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRPAPADFL---------------RD--WGATVVNADLSKPETI  142 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~-~~g~~V~~~~r~~~~~~~~l---------------~~--~~v~~~~~Dl~d~~~l  142 (399)
                      ..+|++|||||+..+|.+.+..|+ ..|..|+++.+..+...+..               +.  .....+.+|+.|.+.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            446899999999999999999998 67999999998755433211               11  2467899999998887


Q ss_pred             HHHhc-------CCCEEEECCC
Q 015872          143 PATLV-------GVHTVIDCAT  157 (399)
Q Consensus       143 ~~~~~-------~~d~Vi~~a~  157 (399)
                      .++++       ++|++||+++
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHhcCCCCEEEEecc
Confidence            77763       6899999998

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.26  E-value=1.6e-06  Score=75.99  Aligned_cols=74  Identities=19%  Similarity=0.338  Sum_probs=53.0

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCc----H
Q 015872           83 PTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET----I  142 (399)
Q Consensus        83 ~~~vlVtGa----------------tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~----l  142 (399)
                      .|+||||||                ||.+|.++++.|+++|++|+++.|.......  ...++.++  |+...++    +
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--~~~~~~~~--~v~s~~em~~~v   78 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--PHPNLSIR--EITNTKDLLIEM   78 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--CCTTEEEE--ECCSHHHHHHHH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--CCCCeEEE--EHhHHHHHHHHH
Confidence            578999999                9999999999999999999999997432110  01244444  4434332    3


Q ss_pred             HHHhcCCCEEEECCCCCC
Q 015872          143 PATLVGVHTVIDCATGRP  160 (399)
Q Consensus       143 ~~~~~~~d~Vi~~a~~~~  160 (399)
                      .+.+.++|++||+|+..+
T Consensus        79 ~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           79 QERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHGGGCSEEEECSBCCS
T ss_pred             HHhcCCCCEEEEcCcccc
Confidence            344567999999999543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.26  E-value=1.2e-06  Score=77.68  Aligned_cols=93  Identities=13%  Similarity=0.144  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |++++++++. .+.+. .++.++.+|.+|++.+.++ ++++|.||.+.+..  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~-~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--   82 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-KKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--   82 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGH-HHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHH-HHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--
Confidence            468999998 9999999999999999 9999987443 33334 6899999999999988877 78999999987521  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCc-EEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYVF  189 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~-~~V~  189 (399)
                              .....++..+++.+.+ ++|-
T Consensus        83 --------~~n~~~~~~a~~~~~~~~iia  103 (234)
T 2aef_A           83 --------SETIHCILGIRKIDESVRIIA  103 (234)
T ss_dssp             --------HHHHHHHHHHHHHCSSSEEEE
T ss_pred             --------HHHHHHHHHHHHHCCCCeEEE
Confidence                    2234566778888775 5553

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.24  E-value=5.4e-06  Score=75.12  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=45.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCC--cccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAP--ADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~--~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      |++++|+|+|++|++|+.+++.+.+ .|++|.++.+..+..  ...+.. .++.  ..++...+++.+++.++|+||+++
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~~DvVIDft   80 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFT   80 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECS
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcCCCEEEEcC
Confidence            4557999999999999999999885 478888555433321  111100 0110  011211233445567899999987


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      .
T Consensus        81 ~   81 (273)
T 1dih_A           81 R   81 (273)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.23  E-value=5.3e-06  Score=79.79  Aligned_cols=94  Identities=16%  Similarity=0.253  Sum_probs=75.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++++ ..+.+...++.++.||.++++.|.++ ++++|+||.+.+.   
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~-~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~---   78 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPD-HIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD---   78 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHH-HHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS---
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH-HHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC---
Confidence            357999997 99999999999999999999999844 34445567899999999999999877 7789999998752   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCc-EEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~-~~V  188 (399)
                             -.....++..+++.+.+ ++|
T Consensus        79 -------~~~n~~i~~~ar~~~p~~~Ii   99 (413)
T 3l9w_A           79 -------PQTNLQLTEMVKEHFPHLQII   99 (413)
T ss_dssp             -------HHHHHHHHHHHHHHCTTCEEE
T ss_pred             -------hHHHHHHHHHHHHhCCCCeEE
Confidence                   23455677788887754 444

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.17  E-value=3.7e-06  Score=73.43  Aligned_cols=176  Identities=13%  Similarity=0.137  Sum_probs=97.2

Q ss_pred             CCCCCeEEEEcC----------------CChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHH
Q 015872           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP  143 (399)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~  143 (399)
                      ++..|+||||||                ||.+|.++++.|+++|++|+++.++.. ..  . ..++.  .+|+.+.+++.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~-~~g~~--~~dv~~~~~~~   78 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--T-PPFVK--RVDVMTALEME   78 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--C-CTTEE--EEECCSHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--c-CCCCe--EEccCcHHHHH
Confidence            356789999999                799999999999999999999988642 11  1 12333  46777755443


Q ss_pred             HH----hcCCCEEEECCCCCC-------CCcchh---------ccHHHHHHHHHHHHHc-CCcEEEEecccCCCCCCCCc
Q 015872          144 AT----LVGVHTVIDCATGRP-------EEPIKK---------VDWEGKVALIQCAKAM-GIQKYVFYSIHNCDKHPEVP  202 (399)
Q Consensus       144 ~~----~~~~d~Vi~~a~~~~-------~~~~~~---------~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~~~~~~  202 (399)
                      +.    +.++|++||+||..+       ...+..         ..+.-+..++....+. ...+| .++-.. +...   
T Consensus        79 ~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VGFaa-Et~~---  153 (226)
T 1u7z_A           79 AAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VVGFAA-ETNN---  153 (226)
T ss_dssp             HHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EEEEEE-ESSS---
T ss_pred             HHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EEEcch-hhch---
Confidence            33    457999999998322       111111         1122223355555553 22233 233322 1111   


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       203 y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                         -.-.+.+-+.+.++++++..+-.-.+..++.--    ....++..++...++..+-.++|+.|+..+.
T Consensus       154 ---l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~----n~v~li~~~~~~~~~~~sK~~vA~~I~~~i~  217 (226)
T 1u7z_A          154 ---VEEYARQKRIRKNLDLICANDVSQPTQGFNSDN----NALHLFWQDGDKVLPLERKELLGQLLLDEIV  217 (226)
T ss_dssp             ---HHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSE----EEEEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHhcCCCEEEEeeccccCCccCCCc----eEEEEEeCCCcEecCCCCHHHHHHHHHHHHH
Confidence               112233445667999999987542111111100    0001111111223456677899998888765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.00  E-value=1.7e-06  Score=80.82  Aligned_cols=109  Identities=15%  Similarity=0.112  Sum_probs=73.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |.++||.|+|++|++|+.++..|+..|  .+|.+++++..+...   .+.....  ...++.-..++.++++++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~~~i~~t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EGLNLTFTSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TTCCCEEESCHHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CCCceEEcCCHHHHhCCCCEEEEc
Confidence            346799999999999999999999998  589999986432111   1111000  001222224577889999999999


Q ss_pred             CCCC--C---CCcchhccHHHHHHHHHHHHHcCCcE--EEEec
Q 015872          156 ATGR--P---EEPIKKVDWEGKVALIQCAKAMGIQK--YVFYS  191 (399)
Q Consensus       156 a~~~--~---~~~~~~~n~~~~~~l~~aa~~~~v~~--~V~~S  191 (399)
                      +|..  +   ..+....|....+.+++.+.+.+.+-  ++.+|
T Consensus        84 aG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           84 GGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            9832  1   12345688888999999999887543  45565

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.93  E-value=4.3e-05  Score=71.48  Aligned_cols=102  Identities=21%  Similarity=0.195  Sum_probs=62.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+|.||||++|+.+++.|++++|   ++..+...... .+.+.-.+......|+ |++.    +.++|+||.|.|. 
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~~~~g~~i~~~~~-~~~~----~~~~DvV~~a~g~-   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMGFAESSLRVGDV-DSFD----FSSVGLAFFAAAA-   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEEETTEEEECEEG-GGCC----GGGCSEEEECSCH-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCccccCCcceEEecC-CHHH----hcCCCEEEEcCCc-
Confidence            46899999999999999999997764   45555422111 1111111212111222 2222    5689999999871 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHH
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM  204 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~  204 (399)
                                ..+..++..+.+.|++ +|.+|+..-  ++..+|+
T Consensus        79 ----------~~s~~~a~~~~~aG~k-vId~Sa~~r--d~~~~~~  110 (340)
T 2hjs_A           79 ----------EVSRAHAERARAAGCS-VIDLSGALE--PSVAPPV  110 (340)
T ss_dssp             ----------HHHHHHHHHHHHTTCE-EEETTCTTT--TTTSCBC
T ss_pred             ----------HHHHHHHHHHHHCCCE-EEEeCCCCC--CCCCCeE
Confidence                      2356788888888984 777776553  2334454

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.92  E-value=7.1e-06  Score=70.59  Aligned_cols=97  Identities=19%  Similarity=0.210  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      .++|+|+||+|.+|..+++.+...|++|++++|+.++ .+.+...+... ..|..+.+....+.     .++|+||+++|
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~-~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            4789999999999999999999999999999987432 22233345433 34777665433332     25999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .           ......++.++..  .++|.+++..
T Consensus       117 ~-----------~~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          117 G-----------EAIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             T-----------HHHHHHHHTEEEE--EEEEECSCGG
T ss_pred             h-----------HHHHHHHHHhccC--CEEEEEcCCC
Confidence            2           1123344444433  3889888755

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.87  E-value=1.6e-05  Score=74.65  Aligned_cols=94  Identities=19%  Similarity=0.142  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC------CcEEEEecCCC--CCccc----ccc-CCcEEEEccCCCCCcHHHHhc
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG------YDVRCLVRPRP--APADF----LRD-WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g------~~V~~~~r~~~--~~~~~----l~~-~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      |++++|+|+||||++|+.+++.|++++      .+|+.+.+...  +....    +.. ..+     ++.+.+  .+.+.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~-----~~~~~~--~~~~~   79 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHR-----VVEPTE--AAVLG   79 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTC-----BCEECC--HHHHT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccccee-----eeccCC--HHHhc
Confidence            345799999999999999999999887      37777764322  21111    111 111     111221  23467


Q ss_pred             CCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          148 GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ++|+||.|.+...           +..++..+ +.|+ ++|-+|+..
T Consensus        80 ~~DvVf~alg~~~-----------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           80 GHDAVFLALPHGH-----------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             TCSEEEECCTTSC-----------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             CCCEEEECCCCcc-----------hHHHHHHH-hCCC-EEEEECCCc
Confidence            9999999987432           45677777 7786 788888764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.84  E-value=1.2e-05  Score=78.57  Aligned_cols=95  Identities=16%  Similarity=0.317  Sum_probs=70.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .|+|+|+|+ |.+|+++++.|.+.||+|++++++++.........++.++.||.++++.|.++ ++.+|.+|-+.+.   
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~---   78 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT---   78 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC---
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC---
Confidence            478999998 99999999999999999999999844333322345899999999999999877 5689999876541   


Q ss_pred             CcchhccHHHHHHHHHHHHHc-CCcEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAM-GIQKYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~-~v~~~V  188 (399)
                         .++|    ...+..|++. +++++|
T Consensus        79 ---De~N----l~~~~~Ak~~~~~~~~i   99 (461)
T 4g65_A           79 ---DETN----MAACQVAFTLFNTPNRI   99 (461)
T ss_dssp             ---HHHH----HHHHHHHHHHHCCSSEE
T ss_pred             ---hHHH----HHHHHHHHHhcCCccce
Confidence               1122    2345556664 665555

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.84  E-value=4.8e-05  Score=68.62  Aligned_cols=98  Identities=17%  Similarity=0.245  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEE-ecCCCCC-cccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAP-ADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~-~r~~~~~-~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      |+++||.|+|++|++|+.+++.+.+. ++++.++ +|+.+.. -..... .+...   ++.-.+++.+++.++|+||++.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~---gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT---GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC---SCBCBCCHHHHHHHCSEEEECS
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC---CceecCCHHHHhcCCCEEEEcC
Confidence            55689999999999999999999876 6787775 5543221 111110 01110   3333456888888999999996


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .           ...+...++.|.++|+ ++| ++|.+
T Consensus        82 ~-----------p~a~~~~~~~al~~G~-~vV-igTTG  106 (272)
T 4f3y_A           82 L-----------PEGTLVHLDAALRHDV-KLV-IGTTG  106 (272)
T ss_dssp             C-----------HHHHHHHHHHHHHHTC-EEE-ECCCC
T ss_pred             C-----------HHHHHHHHHHHHHcCC-CEE-EECCC
Confidence            3           2456778889999998 555 34433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.83  E-value=1.5e-05  Score=74.65  Aligned_cols=92  Identities=11%  Similarity=0.102  Sum_probs=73.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~  161 (399)
                      .++|+|+|+ |.+|+.+++.|.++|+ |++++++++. .+ +...++.++.||.+|++.+.++ ++++|+||-+.+.   
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~-~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~---  187 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVR-KK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---  187 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGH-HH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS---
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhh-hh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc---
Confidence            458999997 9999999999999999 9999987443 34 5667899999999999999887 7899999988651   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCc-EEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~-~~V  188 (399)
                             -.....++..+++.+.+ +++
T Consensus       188 -------d~~n~~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          188 -------DSETIHCILGIRKIDESVRII  208 (336)
T ss_dssp             -------HHHHHHHHHHHHTTCTTSEEE
T ss_pred             -------cHHHHHHHHHHHHHCCCCeEE
Confidence                   12344567778888775 544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.83  E-value=1.6e-06  Score=75.64  Aligned_cols=72  Identities=13%  Similarity=0.185  Sum_probs=50.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEE-ccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN-ADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~-~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|+|+||+|++|..+++.|++.|++|++++|+.++........+. .+. +|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            4799999999999999999999999999999974432211111010 000 2222 2457778889999999986

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.77  E-value=4.2e-05  Score=71.86  Aligned_cols=99  Identities=23%  Similarity=0.314  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-----CCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vi~~a  156 (399)
                      ..++|||+||+|.+|..+++.+...|.+|++++|+.++. +.+...+... ..|+.+.+++.+.+.     ++|+||+++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  246 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence            357899999999999999999999999999999875433 3444455543 348876666655543     699999998


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |..          ......++.++..  .++|.+++..
T Consensus       247 g~~----------~~~~~~~~~l~~~--G~iv~~g~~~  272 (347)
T 2hcy_A          247 VSE----------AAIEASTRYVRAN--GTTVLVGMPA  272 (347)
T ss_dssp             SCH----------HHHHHHTTSEEEE--EEEEECCCCT
T ss_pred             CcH----------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            721          1122233333322  3788887643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.76  E-value=9.7e-06  Score=76.97  Aligned_cols=104  Identities=19%  Similarity=0.219  Sum_probs=68.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      ...++|+|+|+ |.+|..+++.|...|++|++++|+..+........+.. +.+|..+.+++.++++++|+||++++...
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence            45689999999 99999999999999999999999754322111112333 45677777788888999999999998332


Q ss_pred             -CCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          161 -EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       161 -~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                       ....     ..+...++.++. + ..+|.+|+.
T Consensus       242 ~~~~~-----li~~~~l~~mk~-g-g~iV~v~~~  268 (369)
T 2eez_A          242 AKAPK-----LVTRDMLSLMKE-G-AVIVDVAVD  268 (369)
T ss_dssp             ----C-----CSCHHHHTTSCT-T-CEEEECC--
T ss_pred             cccch-----hHHHHHHHhhcC-C-CEEEEEecC
Confidence             1100     012234444432 2 378888854

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.69  E-value=0.0001  Score=68.43  Aligned_cols=102  Identities=11%  Similarity=0.139  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      ..++|.|+|+ |++|..++..|+..|+  +|.+++++.++...   .+..      .++.+...|       .++++++|
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD   75 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD   75 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence            3578999996 9999999999999986  89999986432111   1111      134443333       24688999


Q ss_pred             EEEECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          151 TVIDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +||.++|... +    .+....|....+.+++.+.+...+ .++.+|
T Consensus        76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9999998321 1    223457888888899999888654 555555

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.69  E-value=6.5e-05  Score=69.35  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=67.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ++||.|+|| |.+|..++..|+..|+ +|.+++++.++...   .+..      ...++..     ..++ ++++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNY-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCCEE
Confidence            368999998 9999999999999997 98888887432211   1111      0111111     1224 568999999


Q ss_pred             EECCCCCCC-----CcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          153 IDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       153 i~~a~~~~~-----~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      |.++|....     .+....|....+.+++.+.+...+.+|.+.|
T Consensus        75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            999983221     2233567777788898888887655554443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.67  E-value=3.8e-05  Score=71.75  Aligned_cols=74  Identities=18%  Similarity=0.229  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-----CCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vi~~a  156 (399)
                      ..++|+|+||+|.+|..+++.+...|.+|++++|+.++. +.++..+.. ...|+.+.+++.+.+.     ++|+||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  222 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNV  222 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence            457899999999999999999999999999999874332 223444543 2358877455544442     699999999


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       223 g  223 (333)
T 1v3u_A          223 G  223 (333)
T ss_dssp             C
T ss_pred             C
Confidence            8

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.65  E-value=0.00065  Score=54.60  Aligned_cols=105  Identities=17%  Similarity=0.208  Sum_probs=69.4

Q ss_pred             CCCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .+++|.|+|+|   |.+|..+++.|++.||+|+.+.++..   + +  .|+.       -..++.++.+.+|+|+-+.. 
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~---~-i--~G~~-------~~~s~~el~~~vDlvii~vp-   78 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD---E-I--EGLK-------CYRSVRELPKDVDVIVFVVP-   78 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---E-E--TTEE-------CBSSGGGSCTTCCEEEECSC-
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC---e-E--CCee-------ecCCHHHhCCCCCEEEEEeC-
Confidence            35789999998   89999999999999999777665421   1 1  1222       12334445567999998865 


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                                -.....+++.|.+.|++.++..++..            ..+..+..++.|+++.
T Consensus        79 ----------~~~v~~v~~~~~~~g~~~i~~~~~~~------------~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           79 ----------PKVGLQVAKEAVEAGFKKLWFQPGAE------------SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             ----------HHHHHHHHHHHHHTTCCEEEECTTSC------------CHHHHHHHHHHTCEEE
T ss_pred             ----------HHHHHHHHHHHHHcCCCEEEEcCccH------------HHHHHHHHHHCCCEEE
Confidence                      13355677777788998777655321            1344455677787643

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.61  E-value=0.00015  Score=67.97  Aligned_cols=96  Identities=17%  Similarity=0.098  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEE--ccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVN--ADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~--~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|.|.||||++|+.+++.|.+++ .+|+.+.+.... ...+...- ..+.  .|+.- .++.+ +.++|+||.|.+..
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~-~~~~g~~~~~~-~~~~~-~~~vDvV~~a~g~~   79 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVH-PNLRGRTNLKF-VPPEK-LEPADILVLALPHG   79 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTC-GGGTTTCCCBC-BCGGG-CCCCSEEEECCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhC-chhcCcccccc-cchhH-hcCCCEEEEcCCcH
Confidence            4789999999999999999999875 488877764322 11111100 0000  12211 11222 57899999998732


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                 ....++..+.+.|+ ++|-.|+..
T Consensus        80 -----------~s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           80 -----------VFAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             -----------HHHHTHHHHHTTCS-EEEECSSTT
T ss_pred             -----------HHHHHHHHHHHCCC-EEEEcCccc
Confidence                       24567777778887 688788743

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.60  E-value=3.5e-05  Score=71.45  Aligned_cols=105  Identities=15%  Similarity=0.168  Sum_probs=71.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      .|+++||.|+|+ |.+|..++..|+..|+ +|.+++++.++...   .+..      ....+...     .+. ++++++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-----~d~-~a~~~a   76 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-----NDY-AAIEGA   76 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-----SSG-GGGTTC
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-----CCH-HHHCCC
Confidence            356789999998 9999999999999998 99999997543210   1111      12222211     112 578999


Q ss_pred             CEEEECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          150 HTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       150 d~Vi~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |+||.++|...     ..+....|....+.+++.+.+.+.. .++.+|
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999998321     2234456888888899998888744 566666

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.57  E-value=0.00069  Score=63.61  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc---EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~---V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|.|+||||++|..|++.|.+++|.   +..+.-. ...-+.+.-.+.....-++. .+    .+.++|+||.|.+. 
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-~saG~~~~~~~~~~~~~~~~-~~----~~~~~Dvvf~a~~~-   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSLKFKDQDITIEETT-ET----AFEGVDIALFSAGS-   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-TTTTCEEEETTEEEEEEECC-TT----TTTTCSEEEECSCH-
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-ccCCCcceecCCCceEeeCC-HH----HhcCCCEEEECCCh-
Confidence            468999999999999999999988663   4444422 11111111112222222222 12    25789999999871 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                                ..+...+..+.+.|+ ++|=.|+.
T Consensus        75 ----------~~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           75 ----------STSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             ----------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ----------HhHHHHHHHHHHCCC-EEEEcCCc
Confidence                      235567777778888 67777764

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.57  E-value=0.00011  Score=64.16  Aligned_cols=66  Identities=15%  Similarity=0.196  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +|+|.|+| +|.+|..+++.|.+.|++|++++|+.+.. +.+...++...        ++.++++++|+||.+...
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~g~~~~--------~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT-ARLFPSAAQVT--------FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH-HHHSBTTSEEE--------EHHHHTTSCSEEEECSCG
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCcee--------cHHHHHhCCCEEEECCCh
Confidence            46899999 79999999999999999999999974432 22333355432        366778899999999863

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.56  E-value=0.00053  Score=63.82  Aligned_cols=102  Identities=19%  Similarity=0.153  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---ccccCCcEE--EEccCCCCCcHHHHhcCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRDWGATV--VNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~~~v~~--~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      ++|+|.|+|| |.+|..++..|+..|+ +|.+++++.+....   .+... ...  ....+.-..++.++++++|+||.+
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~ea~~~aDiVi~a   85 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHV-TSVVDTNVSVRAEYSYEAALTGADCVIVT   85 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHH-HHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhh-hhccCCCCEEEEeCCHHHHhCCCCEEEEc
Confidence            3478999998 9999999999999998 99999997543221   01000 000  001111114466789999999999


Q ss_pred             CCCC--C--------CCcchhccHHHHHHHHHHHHHcCCc
Q 015872          156 ATGR--P--------EEPIKKVDWEGKVALIQCAKAMGIQ  185 (399)
Q Consensus       156 a~~~--~--------~~~~~~~n~~~~~~l~~aa~~~~v~  185 (399)
                      +|..  +        ..+....|....+.+++.+.+...+
T Consensus        86 ~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~  125 (331)
T 1pzg_A           86 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK  125 (331)
T ss_dssp             CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             cCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9722  1        1122345666778888888887644

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.56  E-value=6.5e-05  Score=70.75  Aligned_cols=96  Identities=21%  Similarity=0.234  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccc----c-CCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR----D-WGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~----~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      |++++|.|.||+|++|+.+++.|.+++ .+|.++.+..... ..+.    . .+..  ..|+.-.+  .+.++++|+||.
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEE
Confidence            345799999999999999999999876 4888887643221 1111    0 1110  13332222  334568999999


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.+..           .+...+..+ +.|+ ++|-.|+..
T Consensus        89 atp~~-----------~s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           89 CLPHG-----------TTQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CCCTT-----------THHHHHHTS-CTTC-EEEECSSTT
T ss_pred             cCCch-----------hHHHHHHHH-hCCC-EEEECCccc
Confidence            98732           145666777 7787 677777653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.54  E-value=5.5e-05  Score=70.96  Aligned_cols=74  Identities=18%  Similarity=0.265  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHh-----cCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~  155 (399)
                      ..++|||+||+|.+|..+++.+...|.+|++++|+..+ .+.+. ..+... ..|+.+.+++.+.+     .++|+||++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~-~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~  232 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEK-VDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN  232 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence            45789999999999999999999999999999987433 23333 345533 24776654444433     269999999


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      +|
T Consensus       233 ~g  234 (345)
T 2j3h_A          233 VG  234 (345)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.52  E-value=0.00039  Score=64.38  Aligned_cols=103  Identities=11%  Similarity=0.115  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCc---ccccc-----CCcEEEEccCCCCCcHHHHhcCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPA---DFLRD-----WGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~---~~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      ...+||.|+|+ |.+|..++..|+..|.  +|.+++++.++..   ..+.+     .++.+..+|       .++++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            34579999996 9999999999999886  8999998643211   01111     133333322       34689999


Q ss_pred             EEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +||.++|..     ...+....|..-.+.+++.+.++..+ .++.+|
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            999999832     23344567888888999999888654 455555

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.52  E-value=1.6e-05  Score=64.65  Aligned_cols=71  Identities=20%  Similarity=0.233  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .++|+|+|+ |.+|..+++.|.+.|++|.+.+|+.++........+....     ..+++.++++++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-----LINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-----ECSCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-----eecCHHHHhcCCCEEEEeCCCC
Confidence            578999996 9999999999999999999999975543332222243322     2445778889999999998743

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=4.7e-05  Score=70.89  Aligned_cols=98  Identities=15%  Similarity=0.088  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+.++ .+.+...+... ..|..+.+....+.     .++|+||+++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-AQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence            35789999999999999999999999999999997433 22233334432 24776655443332     2689999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.   .        .....++.++..  .++|.+++..
T Consensus       218 g~---~--------~~~~~~~~l~~~--G~iv~~g~~~  242 (327)
T 1qor_A          218 GR---D--------TWERSLDCLQRR--GLMVSFGNSS  242 (327)
T ss_dssp             CG---G--------GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             ch---H--------HHHHHHHHhcCC--CEEEEEecCC
Confidence            81   1        123344444433  3788888654

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.48  E-value=0.00049  Score=64.13  Aligned_cols=93  Identities=20%  Similarity=0.226  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|.|.||+|++|+.+++.|.+++   .+|..+...... -+.+.-.+......|+ |++    .+.++|+||.|.|. 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~~~~~~i~~~~~-~~~----~~~~vDvVf~a~g~-   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYRFNGKTVRVQNV-EEF----DWSQVHIALFSAGG-   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEEETTEEEEEEEG-GGC----CGGGCSEEEECSCH-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCceeecCceeEEecC-ChH----HhcCCCEEEECCCc-
Confidence            5789999999999999999999873   567777632111 1111111212222222 122    24689999999871 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                                ..+...+..+.+.|+ ++|-.|+.
T Consensus        76 ----------~~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           76 ----------ELSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             ----------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ----------hHHHHHHHHHHHcCC-EEEEcCCc
Confidence                      235667788888898 67777765

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.47  E-value=0.00046  Score=64.92  Aligned_cols=96  Identities=17%  Similarity=0.223  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcccccc---CCc----EEEEccCC----CCCcHHHHhc-CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD---WGA----TVVNADLS----KPETIPATLV-GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~---~~v----~~~~~Dl~----d~~~l~~~~~-~~  149 (399)
                      +++|.|.||+|++|+.+++.|.+++ .+|.++.+++....+.+..   ...    ..-..|+.    |++.   .++ ++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   84 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKH---EEFEDV   84 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTS---GGGTTC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHH---HhcCCC
Confidence            4789999999999999999998874 6888887543222111110   000    00001211    2222   335 89


Q ss_pred             CEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       150 d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      |+||.+.+.           .....++..+.+.|+ ++|-.|+.
T Consensus        85 DvV~~atp~-----------~~~~~~a~~~~~aG~-~VId~s~~  116 (354)
T 1ys4_A           85 DIVFSALPS-----------DLAKKFEPEFAKEGK-LIFSNASA  116 (354)
T ss_dssp             CEEEECCCH-----------HHHHHHHHHHHHTTC-EEEECCST
T ss_pred             CEEEECCCc-----------hHHHHHHHHHHHCCC-EEEECCch
Confidence            999999871           234557777778887 46666654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.47  E-value=0.00094  Score=59.16  Aligned_cols=75  Identities=17%  Similarity=0.224  Sum_probs=54.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~~~~~  161 (399)
                      ++|+|+|++|.+|+.+++.+.+. |++|.+.....                      +++.+++. ++|+||++..+   
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------------------~dl~~~~~~~~DvvIDfT~p---   55 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------------------DPLSLLTDGNTEVVIDFTHP---   55 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------------------CCTHHHHHTTCCEEEECSCT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------------------CCHHHHhccCCcEEEEccCh---
Confidence            47999999999999999999876 89998777542                      12334443 78999998752   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                              ..+...++.|.++|+ ++|.-++
T Consensus        56 --------~a~~~~~~~a~~~g~-~~VigTT   77 (245)
T 1p9l_A           56 --------DVVMGNLEFLIDNGI-HAVVGTT   77 (245)
T ss_dssp             --------TTHHHHHHHHHHTTC-EEEECCC
T ss_pred             --------HHHHHHHHHHHHcCC-CEEEcCC
Confidence                    235678888888887 5554333

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.47  E-value=0.0046  Score=56.18  Aligned_cols=110  Identities=19%  Similarity=0.135  Sum_probs=72.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      .++|+|.|+||..|+.+++.|.+.|+++...+........   ..++.+       ..++.++.+  ++|++|.+..   
T Consensus         7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~---i~G~~v-------y~sl~el~~~~~~Dv~Ii~vp---   73 (288)
T 1oi7_A            7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGME---VLGVPV-------YDTVKEAVAHHEVDASIIFVP---   73 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEE-------ESSHHHHHHHSCCSEEEECCC---
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCce---ECCEEe-------eCCHHHHhhcCCCCEEEEecC---
Confidence            4689999999999999999999999996544443221111   112222       234666666  8999998864   


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                              -..+..+++.|.+.|++.+|.+++.- ..       .......++.++.++.+
T Consensus        74 --------~~~~~~~~~ea~~~Gi~~vVi~t~G~-~~-------~~~~~l~~~a~~~gi~v  118 (288)
T 1oi7_A           74 --------APAAADAALEAAHAGIPLIVLITEGI-PT-------LDMVRAVEEIKALGSRL  118 (288)
T ss_dssp             --------HHHHHHHHHHHHHTTCSEEEECCSCC-CH-------HHHHHHHHHHHHHTCEE
T ss_pred             --------HHHHHHHHHHHHHCCCCEEEEECCCC-CH-------HHHHHHHHHHHHcCCEE
Confidence                    24567888999999998777766422 11       12344455666777643

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.46  E-value=0.0014  Score=53.12  Aligned_cols=104  Identities=16%  Similarity=0.122  Sum_probs=68.1

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+|+|++   |.+|..+++.|.+.||+|+.+..  .. .. +  .++..       ..++.++-+.+|.++-+..  
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp--~~-~~-i--~G~~~-------y~sl~~l~~~vDlvvi~vp--   86 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP--KY-EE-V--LGRKC-------YPSVLDIPDKIEVVDLFVK--   86 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT--TC-SE-E--TTEEC-------BSSGGGCSSCCSEEEECSC--
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECC--CC-Ce-E--CCeec-------cCCHHHcCCCCCEEEEEeC--
Confidence            4689999998   89999999999999998655533  22 11 1  12221       2234444457999998864  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                               -.....+++.|.+.|++.+++.++..            -..+.+.+++.|+++.
T Consensus        87 ---------~~~~~~vv~~~~~~gi~~i~~~~g~~------------~~~l~~~a~~~Gi~vv  128 (144)
T 2d59_A           87 ---------PKLTMEYVEQAIKKGAKVVWFQYNTY------------NREASKKADEAGLIIV  128 (144)
T ss_dssp             ---------HHHHHHHHHHHHHHTCSEEEECTTCC------------CHHHHHHHHHTTCEEE
T ss_pred             ---------HHHHHHHHHHHHHcCCCEEEECCCch------------HHHHHHHHHHcCCEEE
Confidence                     14466788888889998776543221            1344556677888743

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.46  E-value=8.1e-05  Score=70.06  Aligned_cols=74  Identities=19%  Similarity=0.217  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH---hc--CCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---LV--GVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~~--~~d~Vi~~a  156 (399)
                      ..++|+|+||+|.+|..+++.+...|.+|++++|+.++ .+.++..+... ..|..+.+....+   ..  ++|+||+++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  247 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML  247 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence            35789999999999999999999999999999987433 22344445433 3466665433332   22  699999998


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       248 G  248 (351)
T 1yb5_A          248 A  248 (351)
T ss_dssp             H
T ss_pred             C
Confidence            7

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.46  E-value=6.6e-05  Score=70.07  Aligned_cols=98  Identities=20%  Similarity=0.249  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH---h--cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~--~~~d~Vi~~a  156 (399)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+.++ .+.+...+... ..|..+.+....+   .  .++|+||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~  222 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEK-AETARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI  222 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence            35789999999999999999999999999999997433 22233334432 3477665433332   2  2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.   .        .....++.++..|  ++|.++...
T Consensus       223 g~---~--------~~~~~~~~l~~~G--~iv~~g~~~  247 (333)
T 1wly_A          223 GK---D--------TLQKSLDCLRPRG--MCAAYGHAS  247 (333)
T ss_dssp             CT---T--------THHHHHHTEEEEE--EEEECCCTT
T ss_pred             cH---H--------HHHHHHHhhccCC--EEEEEecCC
Confidence            84   1        1223344443333  788887654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.44  E-value=0.00021  Score=65.85  Aligned_cols=104  Identities=13%  Similarity=0.059  Sum_probs=69.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-C--CcEEEEecCCCCCc---cccccCC--cEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-G--YDVRCLVRPRPAPA---DFLRDWG--ATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g--~~V~~~~r~~~~~~---~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |||.|+||+|.+|..++..|..+ +  .++.+++++. ...   ..+.+..  ..+... ..  +...++++++|+||.+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            58999999999999999999875 5  5899999874 211   1122211  111111 00  2345788999999999


Q ss_pred             CCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       156 a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +|...     ..+..+.|....+.+.+.+.++..+ .++.+|
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            98321     2234467888888899999888644 566555

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.44  E-value=8.2e-05  Score=70.15  Aligned_cols=96  Identities=16%  Similarity=0.137  Sum_probs=63.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHh---c-CCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL---V-GVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~---~-~~d~Vi~~a~  157 (399)
                      ++|+|+||+|.+|..+++.+...|. +|++++++.++. +.+.. .+... ..|+.+.+....+.   . ++|+||+++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~-~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC-ILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVG  239 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence            7899999999999999999999999 999999974332 22322 45432 35776644322222   2 6999999998


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .           ......++.++..  .++|.++...
T Consensus       240 ~-----------~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          240 G-----------NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             H-----------HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             H-----------HHHHHHHHHhccC--cEEEEECCcc
Confidence            2           1122333333332  3788887654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.44  E-value=4.7e-05  Score=68.97  Aligned_cols=73  Identities=14%  Similarity=0.204  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCc--EEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA--TVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v--~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+..++|+|+|+ |.+|+.++..|++.|++|+++.|+.++........+.  .+   +..+.+++.+  .++|+||++++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~---~~~~~~~~~~--~~~DivVn~t~  189 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI---QALSMDELEG--HEFDLIINATS  189 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE---EECCSGGGTT--CCCSEEEECCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe---eEecHHHhcc--CCCCEEEECCC
Confidence            455689999998 8899999999999999999999975432222111111  12   2223333322  58999999998


Q ss_pred             C
Q 015872          158 G  158 (399)
Q Consensus       158 ~  158 (399)
                      .
T Consensus       190 ~  190 (271)
T 1nyt_A          190 S  190 (271)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.42  E-value=9.8e-05  Score=68.99  Aligned_cols=98  Identities=16%  Similarity=0.202  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHh----cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATL----VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~----~~~d~Vi~~a  156 (399)
                      ..++|||+||+|.+|..+++.+...|.+|++++|+.++ .+.+ +..+... ..|..+.+....+.    .++|+||+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~  226 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEK-CRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV  226 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence            35789999999999999999999999999999987443 3333 4556533 24666654333322    2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.           ......++.++..  .++|.++...
T Consensus       227 g~-----------~~~~~~~~~l~~~--G~iv~~G~~~  251 (336)
T 4b7c_A          227 GG-----------EILDTVLTRIAFK--ARIVLCGAIS  251 (336)
T ss_dssp             CH-----------HHHHHHHTTEEEE--EEEEECCCGG
T ss_pred             Cc-----------chHHHHHHHHhhC--CEEEEEeecc
Confidence            82           1122233333322  3788887655

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.41  E-value=0.00013  Score=67.20  Aligned_cols=78  Identities=12%  Similarity=0.154  Sum_probs=58.0

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCC---CCcccc---c-cCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP---APADFL---R-DWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~---~~~~~l---~-~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      .....++++|+|+ |.+|+.++..|.+.|. +|+++.|+.+   +.....   . ..+..+...++.+.+++.+.+.++|
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence            3456789999997 8999999999999998 8999999832   211111   1 1234455567766666888889999


Q ss_pred             EEEECCC
Q 015872          151 TVIDCAT  157 (399)
Q Consensus       151 ~Vi~~a~  157 (399)
                      +||++.+
T Consensus       229 iIINaTp  235 (315)
T 3tnl_A          229 IFTNATG  235 (315)
T ss_dssp             EEEECSS
T ss_pred             EEEECcc
Confidence            9999986

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.41  E-value=9e-05  Score=69.83  Aligned_cols=98  Identities=16%  Similarity=0.250  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH---h--cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~--~~~d~Vi~~a  156 (399)
                      ..++|+|+||+|.+|..+++.+...|.+|++++|+.++ .+.++..+... ..|..+.+....+   .  .++|+||+++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK-LQMAEKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEECC
Confidence            35789999999999999999999999999999987433 22233334432 3566665433333   2  2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |..           .....++.++..  .++|.++...
T Consensus       240 G~~-----------~~~~~~~~l~~~--G~iv~~G~~~  264 (354)
T 2j8z_A          240 GGS-----------YWEKNVNCLALD--GRWVLYGLMG  264 (354)
T ss_dssp             CGG-----------GHHHHHHHEEEE--EEEEECCCTT
T ss_pred             Cch-----------HHHHHHHhccCC--CEEEEEeccC
Confidence            831           122334444333  3788887654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.40  E-value=0.0001  Score=68.73  Aligned_cols=107  Identities=17%  Similarity=0.154  Sum_probs=70.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCCC-----ccccccC----CcEEEEccCCCCCcHH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAP-----ADFLRDW----GATVVNADLSKPETIP  143 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~~-----~~~l~~~----~v~~~~~Dl~d~~~l~  143 (399)
                      +|+..||.|+||+|.||+.|+-.|.....       ++.+++..+...     .-.+...    ....+.+     .+..
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~-----~~~~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT-----ADPR   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE-----SCHH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc-----CChH
Confidence            45567999999999999999998887642       688888753211     1111111    1122222     2367


Q ss_pred             HHhcCCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc--EEEEec
Q 015872          144 ATLVGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ--KYVFYS  191 (399)
Q Consensus       144 ~~~~~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~S  191 (399)
                      ++++++|+||-+||..     ...+..+.|..-.+.+.+++.+...+  +++.+|
T Consensus        96 ~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            7899999999999932     22345568888889999998876422  555566

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.38  E-value=0.00061  Score=65.69  Aligned_cols=95  Identities=19%  Similarity=0.341  Sum_probs=67.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CC---cEEEEecCCCCCccccccCCcEEEEccCCCC---CcHHHHhcCCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GY---DVRCLVRPRPAPADFLRDWGATVVNADLSKP---ETIPATLVGVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~---~~l~~~~~~~d~Vi~~a  156 (399)
                      ++|+|+| .|.+|+.+++.|+++ ++   +|++.+..... .+.....++.+...++++.   +.+.+++++.|+|||++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s   91 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS   91 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence            6799999 599999999999987 45   78888876443 2223333677777777554   33556777779999966


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      -.           .....++++|.++|+ ++  ++++.
T Consensus        92 ~~-----------~~~l~Im~acleaGv-~Y--lDTa~  115 (480)
T 2ph5_A           92 IG-----------ISSLALIILCNQKGA-LY--INAAT  115 (480)
T ss_dssp             SS-----------SCHHHHHHHHHHHTC-EE--EESSC
T ss_pred             cc-----------ccCHHHHHHHHHcCC-CE--EECCC
Confidence            31           125689999999998 44  45443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.37  E-value=0.00016  Score=66.93  Aligned_cols=100  Identities=8%  Similarity=-0.002  Sum_probs=64.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---ccccC-----CcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ++||.|+|+ |++|..++..|+..|.  +|.+++++.++...   .+.+.     .+++. .  .+    .++++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCEE
Confidence            478999998 9999999999999987  99999997543221   11111     11111 1  11    4568999999


Q ss_pred             EECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEe
Q 015872          153 IDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFY  190 (399)
Q Consensus       153 i~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~  190 (399)
                      |.+++... +    .+....|....+.+++.+.+++.. .++.+
T Consensus        79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99998322 1    122356777788888888887644 44443

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.36  E-value=0.0011  Score=53.40  Aligned_cols=106  Identities=17%  Similarity=0.126  Sum_probs=68.3

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+|+|+|   |.+|..+++.|.+.||+|+.+..  .+....+  .|+.       -..++.++-+.+|.++-+... 
T Consensus        13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp--~~~~~~i--~G~~-------~~~sl~el~~~vDlavi~vp~-   80 (140)
T 1iuk_A           13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP--RFQGEEL--FGEE-------AVASLLDLKEPVDILDVFRPP-   80 (140)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG--GGTTSEE--TTEE-------CBSSGGGCCSCCSEEEECSCH-
T ss_pred             CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCC--CcccCcC--CCEE-------ecCCHHHCCCCCCEEEEEeCH-
Confidence            4679999999   89999999999999998555433  2111111  1221       122344444578999888651 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                                .....+++.|.+.|++.+++.++..            ..++.+.+++.|+++.
T Consensus        81 ----------~~~~~v~~~~~~~gi~~i~~~~g~~------------~~~~~~~a~~~Gir~v  121 (140)
T 1iuk_A           81 ----------SALMDHLPEVLALRPGLVWLQSGIR------------HPEFEKALKEAGIPVV  121 (140)
T ss_dssp             ----------HHHTTTHHHHHHHCCSCEEECTTCC------------CHHHHHHHHHTTCCEE
T ss_pred             ----------HHHHHHHHHHHHcCCCEEEEcCCcC------------HHHHHHHHHHcCCEEE
Confidence                      3345677788888998776544321            1455566788888754

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.33  E-value=0.00016  Score=65.95  Aligned_cols=66  Identities=20%  Similarity=0.317  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +|+|.|+|+||.+|..+++.|.+.|++|++++|+.+.. +.+...++     +..+   ..++++++|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR-DRLQGMGI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH-HHHHHTTC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHhcCC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            47899999999999999999999999999999874332 22222342     2222   3456789999999975

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.32  E-value=4.7e-05  Score=69.57  Aligned_cols=101  Identities=12%  Similarity=0.001  Sum_probs=69.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCc---ccccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPA---DFLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~---~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|+ |.+|..++..|+..|+  +|.+++++++...   ..+.+      ....+...     .+ .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d-~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----AD-YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SC-GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-----CC-HHHhCCCCEE
Confidence            58999999 9999999999999998  9999999754321   01111      11222221     12 4578999999


Q ss_pred             EECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.++|... +    .+....|..-.+.+++.+.+.+.+ .++.+|
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99998322 1    123456778888889998888644 566665

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=97.32  E-value=0.00095  Score=54.15  Aligned_cols=106  Identities=22%  Similarity=0.200  Sum_probs=66.4

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|.|+|++   |.+|..+++.|++.||+|+.+..+... .+ +  .|+..+ -++      .++.+.+|+|+-+... 
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g-~~-i--~G~~~~-~sl------~el~~~~Dlvii~vp~-   80 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAG-KT-L--LGQQGY-ATL------ADVPEKVDMVDVFRNS-   80 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTT-SE-E--TTEECC-SST------TTCSSCCSEEECCSCS-
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccc-cc-c--CCeecc-CCH------HHcCCCCCEEEEEeCH-
Confidence            4679999998   899999999999999997766654210 11 1  132211 123      2333578999988651 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                                .....+++.|.+.|++.++..++..            -....+.+++.|+++.
T Consensus        81 ----------~~v~~v~~~~~~~g~~~i~i~~~~~------------~~~l~~~a~~~Gi~~i  121 (145)
T 2duw_A           81 ----------EAAWGVAQEAIAIGAKTLWLQLGVI------------NEQAAVLAREAGLSVV  121 (145)
T ss_dssp             ----------THHHHHHHHHHHHTCCEEECCTTCC------------CHHHHHHHHTTTCEEE
T ss_pred             ----------HHHHHHHHHHHHcCCCEEEEcCChH------------HHHHHHHHHHcCCEEE
Confidence                      2245667777778988766543211            2344456677787654

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.32  E-value=0.00076  Score=64.03  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ||+|+|+|+ |.+|..+++.|.+.|++|++++.++......+   .-..+..|+.|.+.+.+++.++|.|+...
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~~   70 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV---ADEQIVAGFFDSERIEDLVKGSDVTTYDL   70 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG---SSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh---CceEEECCCCCHHHHHHHHhcCCEEEecc
Confidence            368999997 89999999999999999999997644322212   22467789989888888888999998643

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.31  E-value=0.00013  Score=67.23  Aligned_cols=105  Identities=13%  Similarity=0.144  Sum_probs=70.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC-CCCcc----cccc------CCcEEEEccCCCCCcHHHHhc
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR-PAPAD----FLRD------WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~-~~~~~----~l~~------~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .|+.++|.|+|+ |.+|..++..|+..|+ +|++++++. +...+    .+..      ....+...+  |    .++++
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~   77 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTA   77 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGT
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhC
Confidence            445679999997 9999999999999999 999999973 11111    0100      111121111  1    25789


Q ss_pred             CCCEEEECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          148 GVHTVIDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       148 ~~d~Vi~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ++|+||.++|... +    .+....|....+.+++.+.+++.+ .++.+|
T Consensus        78 ~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           78 DSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            9999999998322 1    233456778888899998887654 566666

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.31  E-value=0.0021  Score=60.57  Aligned_cols=88  Identities=15%  Similarity=0.226  Sum_probs=53.2

Q ss_pred             CeEEEEcCCChhHHHHHHH-HHHCCC---cEEEEecCCCCCccccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRR-ALDEGY---DVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~-L~~~g~---~V~~~~r~~~~~~~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|.|.||+|++|+.+++. |.++++   +++.+..+...  +.+... +......|..|+   .. ++++|+||.|.| 
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G--~~v~~~~g~~i~~~~~~~~---~~-~~~~DvVf~a~g-   74 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG--QAAPSFGGTTGTLQDAFDL---EA-LKALDIIVTCQG-   74 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCGGGTCCCBCEETTCH---HH-HHTCSEEEECSC-
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC--CCccccCCCceEEEecCCh---HH-hcCCCEEEECCC-
Confidence            6899999999999999995 444554   45555543111  111100 112222233232   22 469999999987 


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                                ...+..++..+.+.|++++|
T Consensus        75 ----------~~~s~~~a~~~~~~G~k~vV   94 (367)
T 1t4b_A           75 ----------GDYTNEIYPKLRESGWQGYW   94 (367)
T ss_dssp             ----------HHHHHHHHHHHHHTTCCCEE
T ss_pred             ----------chhHHHHHHHHHHCCCCEEE
Confidence                      13456778888888985433

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.30  E-value=0.0015  Score=60.62  Aligned_cols=95  Identities=19%  Similarity=0.137  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCC--CCccc-------cccC-CcEEEEccCCCCCcHHHHhcCCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRP--APADF-------LRDW-GATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~--~~~~~-------l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      |++|.|+||||++|..+++.|.+. ++++..+..+..  ..-+.       +... +..+...  .+   ..++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~---~~~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SD---ISEFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SS---GGGTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CC---HHHHhcCCCE
Confidence            478999999999999999999985 578888875431  11111       1111 1222211  01   2223378999


Q ss_pred             EEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       152 Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ||.|.+.           ..+..++..+.+.|+ ++|-.|+..
T Consensus        79 vf~a~p~-----------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           79 VFLATAH-----------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             EEECSCH-----------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEECCCh-----------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            9999871           224667777778888 677777653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.29  E-value=0.0011  Score=59.16  Aligned_cols=97  Identities=22%  Similarity=0.202  Sum_probs=63.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCC------------------cc----cccc--CC--cEEEEcc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP------------------AD----FLRD--WG--ATVVNAD  135 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~------------------~~----~l~~--~~--v~~~~~D  135 (399)
                      .++|+|+|+ |.+|..+++.|+..|. +|++++++.-+.                  .+    .+..  ..  ++.+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            468999997 8999999999999996 899999875211                  00    0111  12  3344444


Q ss_pred             CCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       136 l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      +.+ +.+.+.++++|+||.+..          |...-..+.++|++.++ .+|..+.
T Consensus       110 ~~~-~~~~~~~~~~DvVi~~~d----------~~~~~~~l~~~~~~~~~-p~i~~~~  154 (249)
T 1jw9_B          110 LDD-AELAALIAEHDLVLDCTD----------NVAVRNQLNAGCFAAKV-PLVSGAA  154 (249)
T ss_dssp             CCH-HHHHHHHHTSSEEEECCS----------SHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             CCH-hHHHHHHhCCCEEEEeCC----------CHHHHHHHHHHHHHcCC-CEEEeee
Confidence            543 456677889999998864          12334457777888776 4565543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.28  E-value=0.0009  Score=61.89  Aligned_cols=104  Identities=17%  Similarity=0.097  Sum_probs=70.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc---ccccc------CCcEEEEccCCCCCcHHHHhcCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA---DFLRD------WGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~---~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      |.++||.|+|+ |.+|..++..|+..|. +|.+++++.++..   ..+.+      ....+...+  |    .++++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCC
Confidence            45689999995 9999999999999988 9999999754321   11211      122222111  1    25789999


Q ss_pred             EEEECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          151 TVIDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +||.++|... +    .+....|....+.+++.+.+.... .++.+|
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999998321 1    122356888888899999888754 566555

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.27  E-value=0.0008  Score=62.39  Aligned_cols=105  Identities=17%  Similarity=0.111  Sum_probs=71.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---ccccC-----CcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      .+..++|.|+|+ |.+|..++..|+.+|.  +|.+++++..+...   .+.+.     ....+..+  |   . +.++++
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d---~-~~~~~a   88 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--D---Y-SVTANS   88 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--S---G-GGGTTE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--C---H-HHhCCC
Confidence            345689999997 9999999999999986  89999986432111   11110     11222221  2   2 358999


Q ss_pred             CEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          150 HTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       150 d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |+||.++|..     ...+....|..-.+.+.+.+.++... .++.+|
T Consensus        89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999832     22345668888888999999888644 566665

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.25  E-value=0.0013  Score=60.09  Aligned_cols=66  Identities=26%  Similarity=0.358  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+||.++|- |..|..+++.|++.||+|++.+|++++. +.+...+++.       .+++.++++++|+||-|..
T Consensus         5 s~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~-~~l~~~G~~~-------~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            5 SEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKA-EPLTKLGATV-------VENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEC--------CTTTTTTCEE-------CSSGGGGCCTTCEEEECCS
T ss_pred             CCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHcCCeE-------eCCHHHHHhcCCceeeecc
Confidence            368999985 9999999999999999999999985554 3344445443       2456677889999999875

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.25  E-value=0.0017  Score=65.00  Aligned_cols=89  Identities=13%  Similarity=0.160  Sum_probs=70.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~  162 (399)
                      ++|+|+|+ |.+|.++++.|.+.|++|.+++++++.... +   . .++.||.+|++.|.++ ++++|+||-+.+..   
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~---~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d---  419 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCN-D---H-VVVYGDATVGQTLRQAGIDRASGIIVTTNDD---  419 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCC-S---S-CEEESCSSSSTHHHHHTTTSCSEEEECCSCH---
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhh-c---C-CEEEeCCCCHHHHHhcCccccCEEEEECCCc---
Confidence            78999998 999999999999999999999998654332 2   2 7899999999998766 46899999987621   


Q ss_pred             cchhccHHHHHHHHHHHHHcCCc-EEE
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQ-KYV  188 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~-~~V  188 (399)
                             .....++..|++.+.+ ++|
T Consensus       420 -------~~ni~~~~~ak~l~~~~~ii  439 (565)
T 4gx0_A          420 -------STNIFLTLACRHLHSHIRIV  439 (565)
T ss_dssp             -------HHHHHHHHHHHHHCSSSEEE
T ss_pred             -------hHHHHHHHHHHHHCCCCEEE
Confidence                   2234566677888876 555

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.25  E-value=0.00017  Score=67.60  Aligned_cols=99  Identities=14%  Similarity=0.118  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCc---HHHHh--cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL--VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~---l~~~~--~~~d~Vi~~a  156 (399)
                      ..++|||+||+|.+|..+++.+...|++|++++|+.++ .+.+...+...+ .|..+.+.   +.+..  .++|+||+++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDK-LRRAKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            35789999999999999999999999999999997433 223333454332 47766542   22332  2689999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      | ..          .....++.++..|  ++|.+++...
T Consensus       244 g-~~----------~~~~~~~~l~~~G--~~v~~g~~~~  269 (343)
T 2eih_A          244 G-AL----------YFEGVIKATANGG--RIAIAGASSG  269 (343)
T ss_dssp             C-SS----------SHHHHHHHEEEEE--EEEESSCCCS
T ss_pred             C-HH----------HHHHHHHhhccCC--EEEEEecCCC
Confidence            8 21          1234455554443  8898887643

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.23  E-value=0.00097  Score=61.65  Aligned_cols=103  Identities=10%  Similarity=0.106  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc---ccccc------CCcEEEEccCCCCCcHHHHhcCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA---DFLRD------WGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~---~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      |+++||.|+|| |.+|..++..|+..|  .+|.+++++.++..   ..+..      ..+++. +|      ..++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~------~~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG------EYSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC------CGGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC------CHHHhCCC
Confidence            45679999999 999999999999888  48999998642211   01111      122332 22      14568999


Q ss_pred             CEEEECCCCCCC-C----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          150 HTVIDCATGRPE-E----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       150 d~Vi~~a~~~~~-~----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |+||.++|.... .    +....|....+.+++.+.+.... .++.+|
T Consensus        76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999984221 1    22356777778888888888654 444443

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.23  E-value=0.0004  Score=67.46  Aligned_cols=106  Identities=16%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEE-------------EccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------------NADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~-------------~~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+|+ |++|..++..|++.||+|++++|++++... +........             .+.+.-..++.++++++|
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~-l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQ-LNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHH-HHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            68999986 999999999999999999999997443221 211000000             111222245777889999


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHc-CCcE-EEEecc
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQK-YVFYSI  192 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~-~v~~-~V~~Ss  192 (399)
                      +||-+.+.... .-...|+.....+++...+. .-.. +|..||
T Consensus        81 vViiaVptp~~-~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST  123 (450)
T 3gg2_A           81 IIFIAVGTPAG-EDGSADMSYVLDAARSIGRAMSRYILIVTKST  123 (450)
T ss_dssp             EEEECCCCCBC-TTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             EEEEEcCCCcc-cCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence            99999874321 11234555566666655443 2233 444443

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.23  E-value=0.002  Score=58.25  Aligned_cols=93  Identities=13%  Similarity=0.208  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEe-cCCCC-Ccccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPA-PADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~-r~~~~-~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +.||.|.|++|.+|+.+++.+.+. +.++.+.. |+.+. .-..... .++.  ..++.-.+++.+++.++|+||++.. 
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~~aDVvIDFT~-   97 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFSNTEGILDFSQ-   97 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTTSCSEEEECSC-
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhcCCCEEEEcCC-
Confidence            468999999999999999998865 78877764 43221 1111110 1111  1222223568888889999999964 


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                                ...+...++.|.++|+ ++|.
T Consensus        98 ----------p~a~~~~~~~~l~~Gv-~vVi  117 (288)
T 3ijp_A           98 ----------PQASVLYANYAAQKSL-IHII  117 (288)
T ss_dssp             ----------HHHHHHHHHHHHHHTC-EEEE
T ss_pred             ----------HHHHHHHHHHHHHcCC-CEEE
Confidence                      2456778888999998 5663

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.22  E-value=0.00019  Score=67.56  Aligned_cols=98  Identities=14%  Similarity=0.101  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh----cCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~----~~~d~Vi~~a~  157 (399)
                      ...+|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..+.+....+.    .++|+||+++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK-CEACERLGAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhcCCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            45789999999999999999999999999999987443 233344454332 4555544333222    27999999998


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ..           .....++.++..  .++|.++...
T Consensus       245 ~~-----------~~~~~~~~l~~~--G~iv~~g~~~  268 (353)
T 4dup_A          245 AA-----------YFERNIASLAKD--GCLSIIAFLG  268 (353)
T ss_dssp             GG-----------GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             HH-----------HHHHHHHHhccC--CEEEEEEecC
Confidence            31           122333333332  3788887654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.22  E-value=0.00099  Score=60.93  Aligned_cols=65  Identities=26%  Similarity=0.280  Sum_probs=46.4

Q ss_pred             CCe-EEEE-cCC-----------------ChhHHHHHHHHHHCCCcEEEEecCCCCCc--cccc--------------cC
Q 015872           83 PTS-ILVV-GAT-----------------GTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLR--------------DW  127 (399)
Q Consensus        83 ~~~-vlVt-Gat-----------------G~iG~~lv~~L~~~g~~V~~~~r~~~~~~--~~l~--------------~~  127 (399)
                      +++ |||| |||                 |..|.+++++++++|++|+.+.+...-..  ..+.              ..
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~  115 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALS  115 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CC
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccccc
Confidence            355 8888 777                 99999999999999999999998633211  0010              12


Q ss_pred             CcEEEEccCCCCCcHHHHhc
Q 015872          128 GATVVNADLSKPETIPATLV  147 (399)
Q Consensus       128 ~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      ++..+.+|+...+++.+++.
T Consensus       116 ~~~~i~v~v~sa~~m~~av~  135 (313)
T 1p9o_A          116 GLLSLEAEENALPGFAEALR  135 (313)
T ss_dssp             SEEEEEEETTTSTTHHHHHH
T ss_pred             ccceeeeccccHHHHHHHHH
Confidence            45577778877777776663

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.21  E-value=0.00097  Score=62.53  Aligned_cols=94  Identities=12%  Similarity=0.048  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccc----cC--------CcEEEEccCCCCCcHHHHhcCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR----DW--------GATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~----~~--------~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      +++|.|.||+|++|+.+++.|.+.. .+|.++..+.....+.+.    ..        +......|+ |++    .+.++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~----~~~~v   78 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYE----DHKDV   78 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGG----GGTTC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHH----HhcCC
Confidence            5789999999999999999998764 578887521111111110    00        011111222 222    23689


Q ss_pred             CEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       150 d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      |+||.|.+.           .....++..+.+.|+ ++|-.|+.
T Consensus        79 DvVf~atp~-----------~~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           79 DVVLSALPN-----------ELAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             SEEEECCCH-----------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             CEEEECCCh-----------HHHHHHHHHHHHCCC-EEEECCcc
Confidence            999998761           235668888888898 46666654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.20  E-value=0.0008  Score=63.09  Aligned_cols=97  Identities=19%  Similarity=0.294  Sum_probs=64.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHH---HHh--cCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP---ATL--VGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~---~~~--~~~d~Vi~~a~~  158 (399)
                      ++|+|+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..+.+...   +..  .++|+||+++|.
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~-~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ-IALLKDIGAAHV-LNEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG-HHHHHHHTCSEE-EETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCCEE-EECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence            689999999999999999999999999999987443 333444454332 3554433222   222  379999999982


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                                 ......++.++..  .++|.++....
T Consensus       244 -----------~~~~~~~~~l~~~--G~iv~~G~~~~  267 (349)
T 3pi7_A          244 -----------PLASAIFNAMPKR--ARWIIYGRLDP  267 (349)
T ss_dssp             -----------HHHHHHHHHSCTT--CEEEECCCSCC
T ss_pred             -----------hhHHHHHhhhcCC--CEEEEEeccCC
Confidence                       1123344444433  38998886543

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.19  E-value=0.00081  Score=62.48  Aligned_cols=92  Identities=24%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEec--CCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR--PRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r--~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ++|.|.||+|++|+.+++.|.+++|++..+..  +.....+.+.-.+......+. +++.    + ++|+||.|.|.   
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~-~~~~----~-~~DvV~~a~g~---   71 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPL-PEGP----L-PVDLVLASAGG---   71 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEEC-CSSC----C-CCSEEEECSHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeC-Chhh----c-CCCEEEECCCc---
Confidence            47999999999999999999988775433321  101111111111111111222 2332    4 89999999871   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                              ..+...+....+.|+ ++|-.|+.
T Consensus        72 --------~~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           72 --------GISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             --------HHHHHHHHHHHHTTC-EEEECSSS
T ss_pred             --------cchHHHHHHHHHCCC-EEEECCCc
Confidence                    234556777777887 67777765

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.19  E-value=0.00017  Score=66.49  Aligned_cols=73  Identities=21%  Similarity=0.217  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEE--------ccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN--------ADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~--------~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +|+|+|+|+ |.+|..++..|.+.|++|++++|+.+.. +.+...++....        .+..+.+++.++++++|+||-
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~   80 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHI-EAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA   80 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence            478999997 9999999999999999999999974332 222222333221        111122223334558999999


Q ss_pred             CCC
Q 015872          155 CAT  157 (399)
Q Consensus       155 ~a~  157 (399)
                      +..
T Consensus        81 ~v~   83 (316)
T 2ew2_A           81 LTK   83 (316)
T ss_dssp             CSC
T ss_pred             Eec
Confidence            875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.18  E-value=0.00022  Score=65.56  Aligned_cols=97  Identities=19%  Similarity=0.198  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ...+|+|+||+|.+|..+++.+...|.+|++++++..+ .+.++..+...+ .|..+.+++.+.+.++|+||+ +|. . 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~-~-  199 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK-LALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRG-K-  199 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG-SHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSC-T-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCH-H-
Confidence            35789999999999999999999999999999997443 333444555432 354431234444578999999 874 1 


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                       .        ....++.++..|  ++|.++...
T Consensus       200 -~--------~~~~~~~l~~~G--~~v~~g~~~  221 (302)
T 1iz0_A          200 -E--------VEESLGLLAHGG--RLVYIGAAE  221 (302)
T ss_dssp             -T--------HHHHHTTEEEEE--EEEEC----
T ss_pred             -H--------HHHHHHhhccCC--EEEEEeCCC
Confidence             1        223344333333  788777544

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.18  E-value=0.001  Score=63.09  Aligned_cols=71  Identities=17%  Similarity=0.294  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      .+.+++|+|+|+ |.+|..+++.+.+.|++|++++.++......+   .-+.+.+|+.|.+.+.++.+.+|+|..
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV---AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG---SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh---CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            345689999997 99999999999999999999998655433322   235778999999999988888998855

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=97.17  E-value=0.015  Score=52.85  Aligned_cols=109  Identities=17%  Similarity=0.143  Sum_probs=70.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~~  161 (399)
                      .+|+|.|++|..|+.+++.|++.|+++...+. +.+.....  .++.+       ..++.++.+  ++|++|.+..    
T Consensus        14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~Vn-P~~~g~~i--~G~~v-------y~sl~el~~~~~~Dv~ii~vp----   79 (294)
T 2yv1_A           14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVT-PGKGGQNV--HGVPV-------FDTVKEAVKETDANASVIFVP----   79 (294)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCEEEEEC-TTCTTCEE--TTEEE-------ESSHHHHHHHHCCCEEEECCC----
T ss_pred             CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeC-CCCCCceE--CCEee-------eCCHHHHhhcCCCCEEEEccC----
Confidence            46888899999999999999999998544443 22211111  23322       235666777  8999998864    


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                             -..+..+++.|.+.|++.+|.+++.- .       ........+..++.|+.+
T Consensus        80 -------~~~~~~~v~ea~~~Gi~~vVi~t~G~-~-------~~~~~~l~~~A~~~gi~v  124 (294)
T 2yv1_A           80 -------APFAKDAVFEAIDAGIELIVVITEHI-P-------VHDTMEFVNYAEDVGVKI  124 (294)
T ss_dssp             -------HHHHHHHHHHHHHTTCSEEEECCSCC-C-------HHHHHHHHHHHHHHTCEE
T ss_pred             -------HHHHHHHHHHHHHCCCCEEEEECCCC-C-------HHHHHHHHHHHHHcCCEE
Confidence                   24567788889999997677665422 1       112344455666677643

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.14  E-value=0.00042  Score=64.75  Aligned_cols=74  Identities=19%  Similarity=0.265  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ...+|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..+.+....+.     .++|+||+++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~  221 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH-TEELLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDSI  221 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTT-HHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence            35789999999999999999999899999999997544 333444455432 3555544333222     2699999999


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       222 g  222 (340)
T 3gms_A          222 G  222 (340)
T ss_dssp             C
T ss_pred             C
Confidence            8

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.14  E-value=0.0013  Score=61.10  Aligned_cols=104  Identities=9%  Similarity=0.097  Sum_probs=68.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc-----CCcEEEEccCCCCCcHHHHhcCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      ..+.+||.|+|| |.+|+.++..|+..+.  +|.+++++.++...   .+..     ..+.+.. |      -.++++++
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~------~~~a~~~a   77 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A------EYSDAKDA   77 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C------CGGGGGGC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C------CHHHhCCC
Confidence            344579999998 9999999999998875  89999986432211   1111     1233332 2      14568999


Q ss_pred             CEEEECCCCCCCC-----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          150 HTVIDCATGRPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |+||.+++.....     +....|....+.+++.+.++... .++.+|
T Consensus        78 DvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           78 DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             SEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            9999999832211     23346777788888888887643 555554

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=97.13  E-value=0.02  Score=52.12  Aligned_cols=109  Identities=19%  Similarity=0.155  Sum_probs=69.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--C-CCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--G-VHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~-~d~Vi~~a~~~~  160 (399)
                      .+|+|.|++|..|+.+++.|++.|+++...+. +.+.-...  .++.+       ..++.++.+  + +|++|.+...  
T Consensus        14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn-P~~~g~~i--~G~~v-------y~sl~el~~~~~~~DvaIi~vp~--   81 (297)
T 2yv2_A           14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVT-PGKGGSEV--HGVPV-------YDSVKEALAEHPEINTSIVFVPA--   81 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTTCEE--TTEEE-------ESSHHHHHHHCTTCCEEEECCCG--
T ss_pred             CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC-CCCCCceE--CCEee-------eCCHHHHhhcCCCCCEEEEecCH--
Confidence            46888899999999999999999998544444 22211111  13222       234666665  5 9999988642  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                               ..+..+++.|.+.|++.+|.+++.- .       ........++.++.++++
T Consensus        82 ---------~~~~~~v~ea~~~Gi~~vVi~t~G~-~-------~~~~~~l~~~A~~~gi~v  125 (297)
T 2yv2_A           82 ---------PFAPDAVYEAVDAGIRLVVVITEGI-P-------VHDTMRFVNYARQKGATI  125 (297)
T ss_dssp             ---------GGHHHHHHHHHHTTCSEEEECCCCC-C-------HHHHHHHHHHHHHHTCEE
T ss_pred             ---------HHHHHHHHHHHHCCCCEEEEECCCC-C-------HHHHHHHHHHHHHcCCEE
Confidence                     3467788889999998777666422 1       112344455666777643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.12  E-value=0.00089  Score=65.26  Aligned_cols=96  Identities=20%  Similarity=0.322  Sum_probs=70.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPAT-LVGVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~  160 (399)
                      .++|+|.|| |.+|.++++.|. ++++|.++.++.+.....-.. .+..++.||-+|++-|.++ +..+|++|-+.+.. 
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D-  311 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNED-  311 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCH-
T ss_pred             ccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccCc-
Confidence            478999997 999999999874 569999999875443322222 3688999999999988755 57899999986521 


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                           +.|    .-..-.|++.|+++.|-.
T Consensus       312 -----e~N----i~~~llAk~~gv~kvIa~  332 (461)
T 4g65_A          312 -----ETN----IMSAMLAKRMGAKKVMVL  332 (461)
T ss_dssp             -----HHH----HHHHHHHHHTTCSEEEEE
T ss_pred             -----HHH----HHHHHHHHHcCCcccccc
Confidence                 122    345566789999987743

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.11  E-value=0.0011  Score=60.97  Aligned_cols=101  Identities=12%  Similarity=0.093  Sum_probs=69.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|+ |.+|..++..|+..|.  +|.+++++..+...   .+.+      ....+...|      ..++++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~------~~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN------DYGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES------SSGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC------CHHHhCCCCEE
Confidence            58999997 9999999999999886  99999997543211   1111      123333222      13578999999


Q ss_pred             EECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.++|..     ...+....|..-.+.+.+.+.+++.+ .++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            9999832     12334467888888899999888644 555555

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.10  E-value=0.00025  Score=65.88  Aligned_cols=98  Identities=17%  Similarity=0.105  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..++|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+... ..|..+.+....+.     .++|+||+++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  217 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEK-AAHAKALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDGV  217 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence            35789999999999999999999999999999987443 33334445432 24555544333322     2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |..           .....++.++..  .++|.++...
T Consensus       218 g~~-----------~~~~~~~~l~~~--G~iv~~g~~~  242 (325)
T 3jyn_A          218 GQD-----------TWLTSLDSVAPR--GLVVSFGNAS  242 (325)
T ss_dssp             CGG-----------GHHHHHTTEEEE--EEEEECCCTT
T ss_pred             ChH-----------HHHHHHHHhcCC--CEEEEEecCC
Confidence            831           122333333332  3788887654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.10  E-value=0.00083  Score=61.92  Aligned_cols=67  Identities=21%  Similarity=0.291  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+|+|.|+|. |.+|..+++.|++.||+|++.+|+.++. +.+...++..       .+++.++++++|+||-+..
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~-~~l~~~g~~~-------~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKC-DELVEHGASV-------CESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG-HHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHCCCeE-------cCCHHHHHHhCCEEEEEcC
Confidence            3578999985 9999999999999999999999985443 3333344432       3457778889999999875

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.10  E-value=0.0022  Score=56.62  Aligned_cols=62  Identities=19%  Similarity=0.320  Sum_probs=41.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|+||.|+|+ |.+|+.+++.+.+.++++.+. +|+...      ..++.       -.+++.+++ ++|+||+++.
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~------~~gv~-------v~~dl~~l~-~~DVvIDft~   63 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKA------TTPYQ-------QYQHIADVK-GADVAIDFSN   63 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--------CCSC-------BCSCTTTCT-TCSEEEECSC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccc------cCCCc-------eeCCHHHHh-CCCEEEEeCC
Confidence            34689999999 999999999999987776664 444221      11221       112333445 8999999975

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.09  E-value=0.00012  Score=69.12  Aligned_cols=76  Identities=17%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |.+|..+++.|...|.+|++++|+.++. +.+...+...+..+..+.+++.+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            34579999999 9999999999999999999999974432 2222111110111112334577778899999999973

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.08  E-value=0.00065  Score=65.81  Aligned_cols=73  Identities=14%  Similarity=0.170  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEE-------------EccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------------NADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~-------------~~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+| +|++|..++..|++.|++|++++|+.++.. .+...+..+.             .+.+.-..++.++++++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~-~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKID-LINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            4799998 599999999999999999999999743322 1211110000             111222334667788999


Q ss_pred             EEEECCCC
Q 015872          151 TVIDCATG  158 (399)
Q Consensus       151 ~Vi~~a~~  158 (399)
                      +||.+.+.
T Consensus        79 vviiaVpt   86 (436)
T 1mv8_A           79 VSFICVGT   86 (436)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99999873

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.07  E-value=0.0064  Score=56.56  Aligned_cols=92  Identities=20%  Similarity=0.172  Sum_probs=57.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      ++|.|+||||++|..+++.|.++.|   ++..+.-. ...-+.+.-.+.+...-|+.+ +    .+.++|+||.|.+.  
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-~~aG~~~~~~~~~~~~~~~~~-~----~~~~~Dvvf~a~~~--   73 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-RSQGRKLAFRGQEIEVEDAET-A----DPSGLDIALFSAGS--   73 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-TTSSCEEEETTEEEEEEETTT-S----CCTTCSEEEECSCH--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-ccCCCceeecCCceEEEeCCH-H----HhccCCEEEECCCh--
Confidence            5799999999999999999998854   35555432 111111111122222223322 2    34789999999871  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                               ..+...+..+.+.|+ ++|=.|+.
T Consensus        74 ---------~~s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           74 ---------AMSKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             ---------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---------HHHHHHHHHHHhCCC-EEEECCCc
Confidence                     235567777778888 67777764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.07  E-value=0.00037  Score=64.99  Aligned_cols=98  Identities=15%  Similarity=0.220  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH---h--cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~--~~~d~Vi~~a  156 (399)
                      ...+|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..+.+....+   .  .++|+||+++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~ga~~~-~~~~~~~~~~~~~~~~~~~g~D~vid~~  225 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK-LKIAKEYGAEYL-INASKEDILRQVLKFTNGKGVDASFDSV  225 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCcEE-EeCCCchHHHHHHHHhCCCCceEEEECC
Confidence            45789999999999999999999999999999997433 334444554332 455554433322   2  2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      |.    .       .....++.++..|  ++|.++...
T Consensus       226 g~----~-------~~~~~~~~l~~~G--~iv~~G~~~  250 (334)
T 3qwb_A          226 GK----D-------TFEISLAALKRKG--VFVSFGNAS  250 (334)
T ss_dssp             GG----G-------GHHHHHHHEEEEE--EEEECCCTT
T ss_pred             Ch----H-------HHHHHHHHhccCC--EEEEEcCCC
Confidence            83    1       1233444444333  788887643

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.06  E-value=0.00046  Score=65.24  Aligned_cols=99  Identities=20%  Similarity=0.238  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      ...+|||+|+ |.+|..+++.+...|.+|++++++.++.....+..+...+ .|..+.+.+.+...++|+||+++|....
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~g~~~~  264 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGIIDTVSAVHP  264 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence            4578999996 9999999999999999999999875443222224555432 4666655666666789999999984321


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                ....++.++..  .++|.+++..
T Consensus       265 ----------~~~~~~~l~~~--G~iv~~g~~~  285 (366)
T 1yqd_A          265 ----------LLPLFGLLKSH--GKLILVGAPE  285 (366)
T ss_dssp             ----------SHHHHHHEEEE--EEEEECCCCS
T ss_pred             ----------HHHHHHHHhcC--CEEEEEccCC
Confidence                      12334444333  3788888644

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.06  E-value=0.00033  Score=64.16  Aligned_cols=76  Identities=17%  Similarity=0.174  Sum_probs=52.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ....++|+|+|+ |.+|+.++..|++.|. +|++..|+.++........+...  .+..+.+++.+.+.++|+||++.+.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence            455689999997 8899999999999997 99999997544322222111100  0111223566778899999999983

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.05  E-value=0.00095  Score=60.65  Aligned_cols=74  Identities=20%  Similarity=0.254  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc----------C--Cc-----EEEEccCCCCCcHHHH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----------W--GA-----TVVNADLSKPETIPAT  145 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~----------~--~v-----~~~~~Dl~d~~~l~~~  145 (399)
                      .++|.|+|+ |.+|..++..|++.|++|++.+|+.+........          .  +.     ......+.-..++.++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~   82 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA   82 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence            578999986 9999999999999999999999975432211110          0  00     0000001113457778


Q ss_pred             hcCCCEEEECCC
Q 015872          146 LVGVHTVIDCAT  157 (399)
Q Consensus       146 ~~~~d~Vi~~a~  157 (399)
                      ++++|+||-+..
T Consensus        83 ~~~aDlVi~av~   94 (283)
T 4e12_A           83 VKDADLVIEAVP   94 (283)
T ss_dssp             TTTCSEEEECCC
T ss_pred             hccCCEEEEecc
Confidence            899999999986

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.05  E-value=0.0023  Score=60.37  Aligned_cols=97  Identities=13%  Similarity=0.173  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccc----c----------CCcEEEEccCCCCCcHHH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR----D----------WGATVVNADLSKPETIPA  144 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~----~----------~~v~~~~~Dl~d~~~l~~  144 (399)
                      .|++++|.|+||||++|..+++.|.++. .+|..+.-+....-+.+.    .          ....+...|   .+   .
T Consensus        16 ~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~---~~---~   89 (381)
T 3hsk_A           16 HMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK---PE---G   89 (381)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS---SC---T
T ss_pred             cCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc---hh---h
Confidence            4566899999999999999999888865 467555311111111110    0          011111111   11   0


Q ss_pred             HhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       145 ~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .+.++|+||.|.+.           ..+..++..+.+.|+ ++|=.|+..
T Consensus        90 ~~~~~Dvvf~alp~-----------~~s~~~~~~~~~~G~-~VIDlSa~f  127 (381)
T 3hsk_A           90 NFLECDVVFSGLDA-----------DVAGDIEKSFVEAGL-AVVSNAKNY  127 (381)
T ss_dssp             TGGGCSEEEECCCH-----------HHHHHHHHHHHHTTC-EEEECCSTT
T ss_pred             hcccCCEEEECCCh-----------hHHHHHHHHHHhCCC-EEEEcCCcc
Confidence            35789999999871           234567777778888 567677653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.04  E-value=0.00044  Score=64.86  Aligned_cols=74  Identities=28%  Similarity=0.301  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCc---HHHHh--cCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL--VGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~---l~~~~--~~~d~Vi~~  155 (399)
                      ..++|+|+||+|.+|..+++.+... |.+|++++++.++ .+.++..+... ..|..+.+.   +.+..  .++|+||++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  247 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-VEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDL  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-HHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEEC
Confidence            3578999999999999999999999 9999999987433 22333334432 246666544   34444  369999999


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      +|
T Consensus       248 ~g  249 (347)
T 1jvb_A          248 NN  249 (347)
T ss_dssp             CC
T ss_pred             CC
Confidence            98

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.04  E-value=0.0011  Score=60.73  Aligned_cols=54  Identities=26%  Similarity=0.337  Sum_probs=46.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +++|.|+||.|.+|..++..|.+.|++|.+++|+..                     .+..++++++|+||-+..
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~---------------------~~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW---------------------AVAESILANADVVIVSVP   74 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG---------------------GGHHHHHTTCSEEEECSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc---------------------cCHHHHhcCCCEEEEeCC
Confidence            468999998999999999999999999999988632                     135667889999999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.03  E-value=0.00048  Score=65.01  Aligned_cols=98  Identities=15%  Similarity=0.211  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ...+|||+||+|.+|..+++.+...|.+|++++++.+ ..+.++..+...+ .|..+.+ +.+.+     .++|+||+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~Ga~~~-~~~~~~~-~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE-KSAFLKSLGCDRP-INYKTEP-VGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTTCSEE-EETTTSC-HHHHHHHHCTTCEEEEEECS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH-HHHHHHHcCCcEE-EecCChh-HHHHHHHhcCCCCCEEEECC
Confidence            3578999999999999999999999999999998733 3333444555432 3554433 33332     2699999999


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      |.           ......+++++..|  ++|.+++...
T Consensus       240 g~-----------~~~~~~~~~l~~~G--~iv~~g~~~~  265 (362)
T 2c0c_A          240 GG-----------AMFDLAVDALATKG--RLIVIGFISG  265 (362)
T ss_dssp             CT-----------HHHHHHHHHEEEEE--EEEECCCGGG
T ss_pred             CH-----------HHHHHHHHHHhcCC--EEEEEeCCCC
Confidence            82           12334455544433  8898887643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.03  E-value=0.00079  Score=61.89  Aligned_cols=100  Identities=15%  Similarity=0.108  Sum_probs=64.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc-----CCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      |||.|+|| |.+|..++..|+..|+  +|.+++++.+....   .+..     ....+...   +    .++++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~----~~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---G----HSELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---C----HHHhCCCCEEE
Confidence            57999998 9999999999999999  99999997432110   1110     11222211   2    24688999999


Q ss_pred             ECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .+++..     ...+....|....+.+++.+.+.... .++.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999721     12233456777788888888877544 444444

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.03  E-value=0.0042  Score=57.40  Aligned_cols=101  Identities=16%  Similarity=0.056  Sum_probs=68.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc-----CCcEEE-EccCCCCCcHHHHhcCCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVV-NADLSKPETIPATLVGVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~-----~~v~~~-~~Dl~d~~~l~~~~~~~d~  151 (399)
                      .++|.|+|+ |.+|..++..|+..|.  +|.+++++.+....   .+.+     ....+. ..|+   +    .++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCCE
Confidence            578999999 9999999999999986  89999986432111   0110     112222 2232   2    2789999


Q ss_pred             EEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       152 Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ||-++|..     ...+....|..-.+.+++.+.+.+.. .++.+|
T Consensus        93 VIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           93 VVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            99999832     23345567888888899999888644 455555

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.03  E-value=0.0017  Score=60.04  Aligned_cols=100  Identities=10%  Similarity=0.112  Sum_probs=67.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc-----CCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +||.|+|| |.+|+.++..|+..+.  +|.+++++.++...   .+..     ..+++.. |      ..++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~------~~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G------EYSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C------CGGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C------CHHHhCCCCEEE
Confidence            68999998 9999999999998875  89999986432211   1111     1233332 2      145689999999


Q ss_pred             ECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .+++...     ..+....|....+.+++.+.+++.. .++.+|
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            9998321     1244457778888899998888644 555554

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.03  E-value=0.00056  Score=64.29  Aligned_cols=74  Identities=11%  Similarity=0.051  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC-CcEEEEc------cC-CCCCcHHHHhcCCCEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNA------DL-SKPETIPATLVGVHTVI  153 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~-~v~~~~~------Dl-~d~~~l~~~~~~~d~Vi  153 (399)
                      ++|+|+|+|+ |.+|..++..|.+.|++|.+++|+.+... .+... ++.+...      .+ ...+++.++++++|+||
T Consensus         3 ~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            3 ESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIK-EIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            3479999997 99999999999999999999999743322 22221 2211111      11 11245667788999999


Q ss_pred             ECCC
Q 015872          154 DCAT  157 (399)
Q Consensus       154 ~~a~  157 (399)
                      .+..
T Consensus        81 ~~v~   84 (359)
T 1bg6_A           81 IVVP   84 (359)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            9986

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.02  E-value=0.00029  Score=61.54  Aligned_cols=69  Identities=16%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEE-EecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRC-LVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~-~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |++|+|.|+| +|.+|..+++.|.+.|++|.+ .+|+.++........++....       +..+.++++|+||-+..
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-------VELKDALQADVVILAVP   90 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-------CCHHHHTTSSEEEEESC
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-------ChHHHHhcCCEEEEeCC
Confidence            3457899999 699999999999999999999 777754433222222332221       12345788999999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.01  E-value=0.00066  Score=63.51  Aligned_cols=73  Identities=30%  Similarity=0.451  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHH----Hhc--CCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA----TLV--GVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~----~~~--~~d~Vi~~  155 (399)
                      ...+|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..  +++.+    ...  ++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~~ga~~v-~~~~--~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA-TEFVKSVGADIV-LPLE--EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHTCSEE-EESS--TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHhcCCcEE-ecCc--hhHHHHHHHHhCCCCceEEEEC
Confidence            35789999999999999999999999999999997443 333444454332 2333  23332    222  69999999


Q ss_pred             CCC
Q 015872          156 ATG  158 (399)
Q Consensus       156 a~~  158 (399)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            984

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.00  E-value=0.0028  Score=59.57  Aligned_cols=92  Identities=15%  Similarity=0.234  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHH-HHHHCCC---cEEEEecCCC-CCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           84 TSILVVGATGTLGRQIVR-RALDEGY---DVRCLVRPRP-APADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~-~L~~~g~---~V~~~~r~~~-~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|.|+||||++|+.+++ .|.++.+   ++..+.-+.. +....+......+  -|+   ++. ..+.++|+||.|.+.
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~--~~~---~~~-~~~~~~Dvvf~a~~~   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGML--HDA---FDI-ESLKQLDAVITCQGG   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBC--EET---TCH-HHHTTCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEE--Eec---CCh-hHhccCCEEEECCCh
Confidence            479999999999999999 6666653   5555543221 1111121111111  122   122 236899999999871


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss  192 (399)
                                 ..+..++..+.+.|++ ++|=.|+
T Consensus        75 -----------~~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           75 -----------SYTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             -----------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             -----------HHHHHHHHHHHHCCCCEEEEeCCc
Confidence                       2345677777788875 5554454

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.99  E-value=0.00049  Score=65.04  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC--CCccccccCCcEEEEccCCCCCcHHHH---hcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP--APADFLRDWGATVVNADLSKPETIPAT---LVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~--~~~~~l~~~~v~~~~~Dl~d~~~l~~~---~~~~d~Vi~~a~  157 (399)
                      .++|+|+|| |.+|..+++.+...|.+|++++++..  ...+.++..++..+  | .+ +....+   -.++|+||+++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~g  255 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDATG  255 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECCC
Confidence            678999999 99999999999999999999999751  22334445577666  6 55 322222   147999999998


Q ss_pred             C
Q 015872          158 G  158 (399)
Q Consensus       158 ~  158 (399)
                      .
T Consensus       256 ~  256 (366)
T 2cdc_A          256 A  256 (366)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.98  E-value=0.0026  Score=60.49  Aligned_cols=71  Identities=17%  Similarity=0.285  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a  156 (399)
                      ++|+|+|+|+ |.+|..+++.+.+.|++|.+++..+......+   .-+.+..|..|.+.+.++++  ++|+|+...
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~   82 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIVPEI   82 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhh---ccceEECCCCCHHHHHHHHHHcCCCEEEECC
Confidence            4579999987 89999999999999999999988644322211   22466788888877777765  899998754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.97  E-value=0.00014  Score=66.18  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=53.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccccc-----CCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      ....++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++.......     .++.+...+   .+++.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEEE
Confidence            455789999998 9999999999999998 699999985443221111     122333333   345778888999999


Q ss_pred             ECCC
Q 015872          154 DCAT  157 (399)
Q Consensus       154 ~~a~  157 (399)
                      ++.+
T Consensus       200 naTp  203 (283)
T 3jyo_A          200 NATP  203 (283)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9986

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.95  E-value=0.0011  Score=60.24  Aligned_cols=68  Identities=18%  Similarity=0.281  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++|+|.|+|+ |.+|..+++.|++.|+   +|.+.+|+.++........++..       ..+..++++++|+||-+..
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~-------~~~~~~~~~~aDvVilav~   72 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT-------TQDNRQGALNADVVVLAVK   72 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE-------ESCHHHHHSSCSEEEECSC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE-------eCChHHHHhcCCeEEEEeC
Confidence            4578999998 9999999999999999   99999998554333222235443       2346678889999999873

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.93  E-value=0.0034  Score=59.11  Aligned_cols=93  Identities=15%  Similarity=0.222  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChhHHHHHH-HHHHCC---CcEEEEecCCC-CCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVR-RALDEG---YDVRCLVRPRP-APADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~-~L~~~g---~~V~~~~r~~~-~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +++|.|+||||++|..+++ .|.++.   .++..+.-+.. +....+......+  -|+.   +. ..+.++|+||.|.+
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v--~~~~---~~-~~~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTL--KDAT---SI-DDLKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBC--EETT---CH-HHHHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEE--EeCC---Ch-hHhcCCCEEEECCC
Confidence            3689999999999999999 666665   35555543211 1111121111111  1221   22 23579999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecc
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss  192 (399)
                      .           ..+..++..+.+.|++ ++|=.|+
T Consensus        78 ~-----------~~s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           78 G-----------DYTNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             H-----------HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             h-----------HHHHHHHHHHHHCCCCEEEEeCCc
Confidence            1           2345677777788885 5555554

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.93  E-value=0.0033  Score=57.53  Aligned_cols=66  Identities=23%  Similarity=0.327  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |++|-++|- |..|..+++.|++.||+|++.+|++++ .+.+...+.+.       .+++.++.+++|+||-|..
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~-~~~l~~~Ga~~-------a~s~~e~~~~~dvv~~~l~   68 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA-VDGLVAAGASA-------ARSARDAVQGADVVISMLP   68 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH-HHHHHHTTCEE-------CSSHHHHHTTCSEEEECCS
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHH-HHHHHHcCCEE-------cCCHHHHHhcCCceeecCC
Confidence            578999995 999999999999999999999998444 33344445432       3468888999999999975

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.92  E-value=0.00094  Score=61.31  Aligned_cols=68  Identities=19%  Similarity=0.099  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++|+|.|+|. |.+|..+++.|++.||+|++.+|++++. +.+...+......      ++.++++++|+||-+..
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~~g~~~~~~------~~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQAC-ANLLAEGACGAAA------SAREFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCSEEES------SSTTTTTTCSEEEECCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHcCCccccC------CHHHHHhcCCEEEEECC
Confidence            3578999985 9999999999999999999999974432 2333334433222      33456778999999875

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.91  E-value=0.00073  Score=62.80  Aligned_cols=102  Identities=16%  Similarity=0.087  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      +++|.|+|| |.+|..++..|+..|+ +|.+++++.+....   .+..      ....+..     ..++ ++++++|+|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~V   86 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-----ENNY-EYLQNSDVV   86 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-----CCCH-HHHCCCCEE
Confidence            468999998 9999999999999998 99999997543221   1111      0111111     1224 578999999


Q ss_pred             EECCCCCC--C---CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGRP--E---EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~~--~---~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |-+++...  .   .+....|....+.+++.+.+.... .++.+|
T Consensus        87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997211  1   122334667777788888776543 344444

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.90  E-value=0.0017  Score=59.40  Aligned_cols=65  Identities=15%  Similarity=0.151  Sum_probs=50.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +++|.|+|. |.+|..+++.|++.||+|++.+|++++... +...++..       .+++.++++ +|+||-+..
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTP-LAEAGATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHH-HHHTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence            468999985 999999999999999999999998655433 33334432       345777888 999999875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.90  E-value=0.00084  Score=62.20  Aligned_cols=102  Identities=17%  Similarity=0.168  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---cccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ++||.|+|| |.+|..++..|+..|+ +|.+++++.+....   .+..      ....+..     ..++ ++++++|+|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~V   76 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADVV   76 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEE
Confidence            468999998 9999999999999998 99999987443211   1111      0111111     1234 578999999


Q ss_pred             EECCCCC--CC--------CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR--PE--------EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~--~~--------~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.+++..  +.        .+....|....+.+++.+.+...+ .+|.+|
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999722  11        122334666677788887777543 444444

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.90  E-value=0.00031  Score=66.64  Aligned_cols=74  Identities=23%  Similarity=0.288  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +..++|+|+|+ |.+|..+++.|...|.+|++++|+..+... +.. .+..+ ..+..+.+++.+.+.++|+||.+++
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~-~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~  240 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ-LDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVL  240 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCC
Confidence            45689999998 999999999999999999999997443221 211 23221 1223344567788889999999886

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.90  E-value=0.0014  Score=59.56  Aligned_cols=65  Identities=15%  Similarity=0.207  Sum_probs=50.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|.|+|. |.+|..+++.|++.||+|++.+|++++. +.+...++..       .+++.++++++|+||-+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~~g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA-EELAALGAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG-HHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHCCCee-------cCCHHHHHhcCCEEEEEcC
Confidence            68999996 9999999999999999999999985443 3333334322       3467788889999999875

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.90  E-value=0.0036  Score=58.75  Aligned_cols=67  Identities=19%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCC---CEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV---HTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---d~Vi~~a~  157 (399)
                      .+|+|.|+| .|.+|..+++.|++.||+|.+.+|+.++. +.+...++       ....++.++++++   |+||.+..
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~-~~l~~~g~-------~~~~s~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAV-QALEREGI-------AGARSIEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHTTTC-------BCCSSHHHHHHHSCSSCEEEECSC
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHCCC-------EEeCCHHHHHhcCCCCCEEEEeCC
Confidence            357999999 59999999999999999999999975432 22333332       2234566666666   99999976

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.89  E-value=0.0013  Score=60.95  Aligned_cols=67  Identities=24%  Similarity=0.374  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++|+|.|+|. |.+|..+++.|++.|++|++.+|++++. +.+...++..       ..++.++++++|+||-+..
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~l~~~g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARA-ASLAALGATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHH-HHHHHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence            3578999986 9999999999999999999999975432 2333334432       2457788899999999875

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=96.88  E-value=0.0043  Score=48.53  Aligned_cols=103  Identities=17%  Similarity=0.194  Sum_probs=67.8

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|+|+|||   +..|..+.+.|++.||+|+.+.-....    +  .|... .-++.|   +   =+ +|.++-+..  
T Consensus         4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i--~G~~~-y~sl~d---l---p~-vDlavi~~p--   67 (122)
T 3ff4_A            4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----V--LGKTI-INERPV---I---EG-VDTVTLYIN--   67 (122)
T ss_dssp             CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----E--TTEEC-BCSCCC---C---TT-CCEEEECSC--
T ss_pred             CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----C--CCeec-cCChHH---C---CC-CCEEEEEeC--
Confidence            5679999998   578999999999999988876543111    1  12211 123333   2   24 788888754  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                               -..+..+++.|.+.|++.++ +++.. .          ..++.+..++.|+++.
T Consensus        68 ---------~~~v~~~v~e~~~~g~k~v~-~~~G~-~----------~~e~~~~a~~~Girvv  109 (122)
T 3ff4_A           68 ---------PQNQLSEYNYILSLKPKRVI-FNPGT-E----------NEELEEILSENGIEPV  109 (122)
T ss_dssp             ---------HHHHGGGHHHHHHHCCSEEE-ECTTC-C----------CHHHHHHHHHTTCEEE
T ss_pred             ---------HHHHHHHHHHHHhcCCCEEE-ECCCC-C----------hHHHHHHHHHcCCeEE
Confidence                     24456688888889998754 55432 1          1355667788998865

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.88  E-value=0.0012  Score=63.44  Aligned_cols=71  Identities=21%  Similarity=0.223  Sum_probs=56.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      .+.+++|+|+|+ |.+|..+++.+.+.|++|++++.++......+   .-+.+.+|+.|.+.+.++.+++|+|+.
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV---ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhh---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            445689999997 99999999999999999999987644433222   235667899999999988889999984

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.88  E-value=0.00089  Score=61.89  Aligned_cols=102  Identities=13%  Similarity=0.171  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcc---cccc----C--CcEEEEccCCCCCcHHHHhcCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD----W--GATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~---~l~~----~--~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +++||.|+|+ |.+|..++..|+..|.  +|.+++++.+....   .+..    .  .+.+.. |      ..++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~------~~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G------DYDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C------CGGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C------cHHHhCCCC
Confidence            3579999998 9999999999988774  89999997431110   0100    0  222221 1      135689999


Q ss_pred             EEEECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       151 ~Vi~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +||.+++...     ..+....|....+.+++.+.+.... .++.+|
T Consensus        77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            9999998321     1233445667777788888887644 344444

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.88  E-value=0.00065  Score=65.04  Aligned_cols=108  Identities=13%  Similarity=0.034  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEE-----------EccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-----------NADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~-----------~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |+|.|+|+ |++|..++..|++ ||+|++++|+.++. +.+...+..+.           .+.+.-..+..++++++|+|
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~~~~-~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv   77 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILPSKV-DKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV   77 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCHHHH-HHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCHHHH-HHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence            47999997 9999999999999 99999999974332 22222221100           01111123455677889999


Q ss_pred             EECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEe-cccC
Q 015872          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY-SIHN  194 (399)
Q Consensus       153 i~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~-Ss~~  194 (399)
                      |-+.+......-...++.....+++.....+...+|.. ||..
T Consensus        78 iiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~  120 (402)
T 1dlj_A           78 IIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIP  120 (402)
T ss_dssp             EECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCC
T ss_pred             EEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCC
Confidence            99987431111112333344555544433333344444 6543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.87  E-value=0.00087  Score=62.57  Aligned_cols=97  Identities=19%  Similarity=0.253  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcH---HHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI---PATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l---~~~~~~~d~Vi~~a~~~  159 (399)
                      .++|||+|| |.+|..+++.+...|.+|++++|+..+ .+.++..+...+ .|..+.+..   .+...++|+||+++|..
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g~~  241 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK-LELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAVSK  241 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSCCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCCCH
Confidence            578999999 779999999999999999999987433 333445565433 576654322   22225799999999831


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                ......++.++..|  ++|.++...
T Consensus       242 ----------~~~~~~~~~l~~~G--~~v~~g~~~  264 (339)
T 1rjw_A          242 ----------PAFQSAYNSIRRGG--ACVLVGLPP  264 (339)
T ss_dssp             ----------HHHHHHHHHEEEEE--EEEECCCCS
T ss_pred             ----------HHHHHHHHHhhcCC--EEEEecccC
Confidence                      12333444444333  788887643

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.87  E-value=0.00081  Score=62.08  Aligned_cols=69  Identities=10%  Similarity=0.116  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC-CCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR-PAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~-~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +.+|+|.|+|. |.+|..+++.|++.|+ +|++.+|+. +...+.+...++..       .+++.++++++|+||-+..
T Consensus        22 ~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~vp   92 (312)
T 3qsg_A           22 SNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-------KASVAEVAGECDVIFSLVT   92 (312)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-------CSCHHHHHHHCSEEEECSC
T ss_pred             CCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-------eCCHHHHHhcCCEEEEecC
Confidence            34579999996 9999999999999999 999999973 33333334445432       2457778889999999986

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.86  E-value=0.00096  Score=61.37  Aligned_cols=67  Identities=24%  Similarity=0.259  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ++++|.|+|. |.+|..+++.|++.|++|++.+|+.++... +...++..       .+++.++++++|+||-+..
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~-------~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAA-LVAAGAHL-------CESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHH-HHHHTCEE-------CSSHHHHHHHSSEEEECCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCee-------cCCHHHHHhcCCEEEEEeC
Confidence            4578999985 999999999999999999999997543322 22224321       3457788889999999875

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.85  E-value=0.002  Score=58.62  Aligned_cols=101  Identities=12%  Similarity=0.008  Sum_probs=68.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc---ccccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA---DFLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~---~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|+ |.+|+.++..|+.++  .++.+++.+.....   ..+.+      ....+...+  |    .+.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d----~~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--D----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--C----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--C----HHHhCCCCEE
Confidence            68999996 999999999999887  48999998642211   11111      112233221  1    1358899999


Q ss_pred             EECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |-+||..     ...+....|..-.+.+.+.+.++..+ .++.+|
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9999922     22344567888889999999988755 455555

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.85  E-value=0.00049  Score=62.21  Aligned_cols=73  Identities=14%  Similarity=0.250  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCc--EEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA--TVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v--~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|+ |.+|+.++..|++.|++|++..|+.++........+.  .....|+.   ++.+  .++|+||++++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~---~~~~--~~~DivIn~t~  189 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD---SIPL--QTYDLVINATS  189 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---GCCC--SCCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHH---Hhcc--CCCCEEEECCC
Confidence            445689999998 8899999999999999999999985433222111110  11123331   1111  37999999998


Q ss_pred             C
Q 015872          158 G  158 (399)
Q Consensus       158 ~  158 (399)
                      .
T Consensus       190 ~  190 (272)
T 1p77_A          190 A  190 (272)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=96.84  E-value=0.0019  Score=62.65  Aligned_cols=77  Identities=16%  Similarity=0.185  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEc------cCCCCCcHHHHhc--CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNA------DLSKPETIPATLV--GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~------Dl~d~~~l~~~~~--~~d~  151 (399)
                      .|++++|||+|+ |.+|..+++.+.+.|++|++++................+..+      ++.|.+.+.++.+  ++|+
T Consensus         3 ~m~~~kiLI~g~-g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~   81 (446)
T 3ouz_A            3 AMEIKSILIANR-GEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADA   81 (446)
T ss_dssp             TTCCCEEEECCC-HHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSE
T ss_pred             ccccceEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCE
Confidence            466789999995 889999999999999999999754332221111112222222      4555556666554  7998


Q ss_pred             EEECCC
Q 015872          152 VIDCAT  157 (399)
Q Consensus       152 Vi~~a~  157 (399)
                      |+-..+
T Consensus        82 i~p~~g   87 (446)
T 3ouz_A           82 IFPGYG   87 (446)
T ss_dssp             EECCSS
T ss_pred             EEECCc
Confidence            876543

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.83  E-value=0.0022  Score=60.70  Aligned_cols=74  Identities=18%  Similarity=0.256  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh--cCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~--~~~d~Vi~~a~~  158 (399)
                      ...+|+|+||+|-+|..+++.+...|.+|+++++.  +..+.++..+...+ .|..+.+....+.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~--~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQ--DASELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECG--GGHHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCh--HHHHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCCC
Confidence            45789999999999999999999999999988842  33444555665433 3555544333332  479999999983

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.82  E-value=0.0016  Score=59.61  Aligned_cols=73  Identities=15%  Similarity=0.262  Sum_probs=55.2

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .....++|+|+|+ |.+|+.+++.|...|.+|++.+|+..+ ...+...+++.+.     .+++.+.++++|+|+.+.+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH-LARITEMGLVPFH-----TDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCEEEE-----GGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHCCCeEEc-----hhhHHHHhhCCCEEEECCCh
Confidence            3566789999996 999999999999999999999997432 2222233554332     24578888999999999874

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.82  E-value=0.0063  Score=56.37  Aligned_cols=116  Identities=11%  Similarity=0.040  Sum_probs=77.4

Q ss_pred             CCeEEEEcCCChhHHH-HHHHHHHCCCcEEEEecCCCC-CccccccCCcEEEEccCCCCCcHHHHh-cCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQ-IVRRALDEGYDVRCLVRPRPA-PADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~-lv~~L~~~g~~V~~~~r~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~-~~~d~Vi~~a~~~  159 (399)
                      +|+|.|+|. |..|.. +++.|.++|++|.+.+++... ..+.|...+++++.+.  +++.   .. .++|.||...|..
T Consensus         4 ~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~---l~~~~~d~vV~Spgi~   77 (326)
T 3eag_A            4 MKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQ---LDEFKADVYVIGNVAK   77 (326)
T ss_dssp             CCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGG---GGSCCCSEEEECTTCC
T ss_pred             CcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHH---cCCCCCCEEEECCCcC
Confidence            578999998 788885 899999999999999987543 2345666788888763  3332   23 4799999988844


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCc----------------EEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQ----------------KYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~----------------~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                      +...           .+.+|++.|++                ++|-++       ..+.-..++......|++.|.+..
T Consensus        78 ~~~p-----------~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVT-------GTnGKTTTt~ll~~iL~~~g~~~~  138 (326)
T 3eag_A           78 RGMD-----------VVEAILNLGLPYISGPQWLSENVLHHHWVLGVA-------GTHGKTTTASMLAWVLEYAGLAPG  138 (326)
T ss_dssp             TTCH-----------HHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEE-------SSSCHHHHHHHHHHHHHHTTCCCE
T ss_pred             CCCH-----------HHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEE-------CCCCHHHHHHHHHHHHHHcCCCce
Confidence            3322           23333333332                333333       224456778888888888887754

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.80  E-value=0.001  Score=60.50  Aligned_cols=65  Identities=20%  Similarity=0.243  Sum_probs=50.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|.|+| .|.+|..+++.|++.||+|++.+|++++.. .+...++..       .+++.++++++|+||-+..
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~-~~~~~g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCA-PLVALGARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGH-HHHHHTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHH-HHHHCCCee-------cCCHHHHHHcCCEEEEEcC
Confidence            5799998 599999999999999999999999855433 233334322       3457778889999999875

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.80  E-value=0.0011  Score=60.69  Aligned_cols=65  Identities=20%  Similarity=0.251  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|.|+| .|.+|..++..|.+.|++|.+++|+.+.. +.+...++..       ..++.++++++|+||.+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~-------~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAI-ADVIAAGAET-------ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence            6899999 59999999999999999999999874332 2233334332       2346677888999999975

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.79  E-value=0.002  Score=60.64  Aligned_cols=97  Identities=22%  Similarity=0.361  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCChhHHHH-HHHH-HHCCCc-EEEEecCCCC--CccccccCCcEEEEccCCCCCc--HHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQI-VRRA-LDEGYD-VRCLVRPRPA--PADFLRDWGATVVNADLSKPET--IPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~l-v~~L-~~~g~~-V~~~~r~~~~--~~~~l~~~~v~~~~~Dl~d~~~--l~~~~~~~d~Vi~~  155 (399)
                      ..+|||+|| |-+|... ++.+ ...|.+ |++++++.+.  ..+.+++.++..+  |..+.+.  +.++-.++|+||++
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~  249 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEA  249 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEEC
Confidence            378999999 9999999 8888 778987 9999997441  3445566788777  7765432  33331269999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +|..          ......++.++..|  ++|.++...
T Consensus       250 ~g~~----------~~~~~~~~~l~~~G--~iv~~g~~~  276 (357)
T 2b5w_A          250 TGFP----------KHAIQSVQALAPNG--VGALLGVPS  276 (357)
T ss_dssp             SCCH----------HHHHHHHHHEEEEE--EEEECCCCC
T ss_pred             CCCh----------HHHHHHHHHHhcCC--EEEEEeCCC
Confidence            8821          11233444444333  788887654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.79  E-value=0.0026  Score=58.28  Aligned_cols=36  Identities=22%  Similarity=0.308  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .+++|.|+|+ |.+|..++..|++.|++|++++|+.+
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~   49 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   49 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            4578999998 99999999999999999999999744

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.79  E-value=0.0011  Score=58.83  Aligned_cols=70  Identities=23%  Similarity=0.304  Sum_probs=49.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC--------------CccccccCCcEEEEccCCCCCcHHHH
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--------------PADFLRDWGATVVNADLSKPETIPAT  145 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~--------------~~~~l~~~~v~~~~~Dl~d~~~l~~~  145 (399)
                      .+..++|.|+| .|.+|..+++.|++.||+|++.+|+.++              ........+.       ....+..++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~   87 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH-------VHLAAFADV   87 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTT-------CEEEEHHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc-------eeccCHHHH
Confidence            45568999998 5999999999999999999999998543              0111111111       112356677


Q ss_pred             hcCCCEEEECCC
Q 015872          146 LVGVHTVIDCAT  157 (399)
Q Consensus       146 ~~~~d~Vi~~a~  157 (399)
                      ++++|+||-+..
T Consensus        88 ~~~aDvVilavp   99 (245)
T 3dtt_A           88 AAGAELVVNATE   99 (245)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HhcCCEEEEccC
Confidence            889999999976

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.78  E-value=0.0007  Score=62.72  Aligned_cols=73  Identities=21%  Similarity=0.275  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ...+|+|+||+|.+|...++.+...|.+|+++++. ++ .+.+++.+... ..|..+.+.+.+.+.++|+||++.|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~lGa~~-~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKALGAEQ-CINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHHTCSE-EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHcCCCE-EEeCCCcchhhhhccCCCEEEECCC
Confidence            35789999999999999999999999999998864 22 34444556543 2466555547777789999999988

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.78  E-value=0.00098  Score=61.26  Aligned_cols=77  Identities=18%  Similarity=0.321  Sum_probs=53.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCC---CCccccc----cCCcEEEEccCCCCCcHHHHhcCCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP---APADFLR----DWGATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~---~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      ....++++|+|+ |.+|+.++..|.+.|. +|+++.|+.+   +......    ..+..+...++.+.+.+.+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            456789999997 9999999999999997 8999999832   2221111    12334444555443334666788999


Q ss_pred             EEECCC
Q 015872          152 VIDCAT  157 (399)
Q Consensus       152 Vi~~a~  157 (399)
                      ||++.+
T Consensus       224 IINaTp  229 (312)
T 3t4e_A          224 LTNGTK  229 (312)
T ss_dssp             EEECSS
T ss_pred             EEECCc
Confidence            999976

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.78  E-value=0.00072  Score=60.78  Aligned_cols=67  Identities=16%  Similarity=0.277  Sum_probs=48.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +|+|.|+|+ |.+|..++..|.+.|++ |.+.+|+.+.........++...       .++.++++++|+||-+..
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-------TDLAEVNPYAKLYIVSLK   77 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-------SCGGGSCSCCSEEEECCC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-------CCHHHHhcCCCEEEEecC
Confidence            468999997 99999999999999999 88888874433222222244321       234456778999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.76  E-value=0.001  Score=62.27  Aligned_cols=94  Identities=22%  Similarity=0.232  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh------cCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL------VGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~------~~~d~Vi~~  155 (399)
                      ...+|||+||+|.+|..+++.+...|.+|+++ ++.+ ..+.++..+...  .| .+. ++.+.+      .++|+||++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~-~~~~~~~lGa~~--i~-~~~-~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS-DLEYVRDLGATP--ID-ASR-EPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH-HHHHHHHHTSEE--EE-TTS-CHHHHHHHHHTTSCEEEEEES
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH-HHHHHHHcCCCE--ec-cCC-CHHHHHHHHhcCCCceEEEEC
Confidence            35789999999999999999999999999998 5533 344455567766  45 333 333322      269999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +|.           ......++.++..  .++|.++...
T Consensus       224 ~g~-----------~~~~~~~~~l~~~--G~iv~~g~~~  249 (343)
T 3gaz_A          224 LGG-----------PVLDASFSAVKRF--GHVVSCLGWG  249 (343)
T ss_dssp             SCT-----------HHHHHHHHHEEEE--EEEEESCCCS
T ss_pred             CCc-----------HHHHHHHHHHhcC--CeEEEEcccC
Confidence            982           1122334443333  3788776543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.76  E-value=0.0019  Score=58.96  Aligned_cols=71  Identities=17%  Similarity=0.253  Sum_probs=54.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|+|+|+ |.+|+.+++.|...|.+|++.+|+..+. ..+...+++.+.     .+++.++++++|+|+.+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~-~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL-ARIAEMGMEPFH-----ISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTSEEEE-----GGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHCCCeecC-----hhhHHHHhcCCCEEEECCC
Confidence            456789999995 9999999999999999999999974332 222334555432     2457788899999999875

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.76  E-value=0.00097  Score=60.25  Aligned_cols=69  Identities=13%  Similarity=0.145  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ...++|+|+|+ |.+|+.++..|.+.|. +|+++.|+.++... +.. ++..+     ..+++.+++.++|+||++.+
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la~-~~~~~-----~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN-WSL-NINKI-----NLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT-CCS-CCEEE-----CHHHHHHTGGGCSEEEECCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHH-hcccc-----cHhhHHHHhcCCCEEEECcc
Confidence            45678999997 8999999999999998 89999998554332 221 22221     12346667789999999976

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.75  E-value=0.0048  Score=59.65  Aligned_cols=107  Identities=15%  Similarity=0.045  Sum_probs=65.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEE-------------EccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------------NADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~-------------~~Dl~d~~~l~~~~~~~d  150 (399)
                      -+|.|+|. |++|..++..|++.||+|++++|++++... +.......+             .+.+.-..++.++++++|
T Consensus         9 ~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~-l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD   86 (446)
T 4a7p_A            9 VRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIEL-LHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD   86 (446)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH-HTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence            46999996 999999999999999999999998654332 222110000             011211245777889999


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHc-CC-cEEEEecc
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GI-QKYVFYSI  192 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~-~v-~~~V~~Ss  192 (399)
                      +||-|.+......-...|+.....+++...+. .- .-+|..||
T Consensus        87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST  130 (446)
T 4a7p_A           87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST  130 (446)
T ss_dssp             EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC
T ss_pred             EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            99999863221101234555566666655443 22 24555553

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.74  E-value=0.003  Score=56.66  Aligned_cols=65  Identities=17%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .++|+|+|+ |..|+.++..|.+.|.+|+++.|+.++..... ..+++..  ++.+   +    .++|+||++.+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~---l----~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPP---K----SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCC---S----SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHH---h----ccCCEEEEcccC
Confidence            679999997 99999999999999999999999866544433 3344333  3322   2    289999999873

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.74  E-value=0.0011  Score=62.54  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-cCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-~~~d~Vi~~a~~  158 (399)
                      ..+|||+|+ |-+|..+++.+...|.+|++++++..+ .+.++..+...+ .|..+.+++.+.+ .++|+||+++|.
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~-~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK-REDAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT-HHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            578999999 999999999988899999999987544 333444554432 3544441333333 589999999985

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.74  E-value=0.00099  Score=62.44  Aligned_cols=98  Identities=17%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHH---HHh--cCCCEEEEC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP---ATL--VGVHTVIDC  155 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~---~~~--~~~d~Vi~~  155 (399)
                      ...+|||+|+ |.+|..+++.+...|. +|++++++.+ ..+.++..+...+ .|..+.+...   +..  .++|+||++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~-~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~  243 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDF-RRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEF  243 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH-HHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH-HHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence            4578999999 9999999999999999 9999998733 3333444454432 3555543222   222  269999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +|..          ......++.++..|  ++|.+++..
T Consensus       244 ~g~~----------~~~~~~~~~l~~~G--~iv~~g~~~  270 (348)
T 2d8a_A          244 SGAP----------KALEQGLQAVTPAG--RVSLLGLYP  270 (348)
T ss_dssp             SCCH----------HHHHHHHHHEEEEE--EEEECCCCS
T ss_pred             CCCH----------HHHHHHHHHHhcCC--EEEEEccCC
Confidence            9831          12233444444333  788887654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.73  E-value=0.00085  Score=64.30  Aligned_cols=72  Identities=24%  Similarity=0.440  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|+|+|+ |.+|..+++.|...|. +|++++|+..+........+.+.+  +   .+++.+.+.++|+||.+.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~---~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--R---FDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--C---GGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--c---HHhHHHHhcCCCEEEEccCC
Confidence            34678999998 9999999999999998 899999974432222222344422  2   24577788899999999863

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.73  E-value=0.0026  Score=60.90  Aligned_cols=70  Identities=21%  Similarity=0.275  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      ++++|+|+|+ |.+|..+++.+.+.|++|++++ ....+...+.. ....+.+|+.|.+.+.++.+.+|+|+.
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad-~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISA-HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCC-SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcc-ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            4679999997 8999999999999999999999 64444333322 124578899999999999999998875

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.72  E-value=0.0013  Score=63.15  Aligned_cols=75  Identities=12%  Similarity=0.026  Sum_probs=49.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEE--------E---EccCCCCCcHHHHhcCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATV--------V---NADLSKPETIPATLVGV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~--------~---~~Dl~d~~~l~~~~~~~  149 (399)
                      ..+|+|.|+|+ |++|..++..|++ |++|++++|++++... +......+        +   .+.+.-..++.++++++
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~-l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a  110 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDM-LNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA  110 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHH-HHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhH-HhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence            34578999995 9999999999887 9999999997543221 11100000        0   01121124567788999


Q ss_pred             CEEEECCCC
Q 015872          150 HTVIDCATG  158 (399)
Q Consensus       150 d~Vi~~a~~  158 (399)
                      |+||-+.+.
T Consensus       111 DvViiaVPt  119 (432)
T 3pid_A          111 DYVIIATPT  119 (432)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEeCCC
Confidence            999998763

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.72  E-value=0.0064  Score=54.10  Aligned_cols=97  Identities=14%  Similarity=0.236  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccc----------------------ccc--CCcE--EEEcc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LRD--WGAT--VVNAD  135 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~----------------------l~~--~~v~--~~~~D  135 (399)
                      ..+|+|+|+ |.+|..+++.|+..|. ++++++++.-.....                      +..  .+++  .+..+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999998 6799999999999995 777777653211100                      000  1222  23333


Q ss_pred             CCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       136 l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      +. .+.+.+.++++|+||++..          |...-..+.++|.+.++ .+|..+.
T Consensus       107 ~~-~~~~~~~~~~~DvVi~~~d----------~~~~r~~l~~~~~~~~~-p~i~~~~  151 (251)
T 1zud_1          107 LT-GEALKDAVARADVVLDCTD----------NMATRQEINAACVALNT-PLITASA  151 (251)
T ss_dssp             CC-HHHHHHHHHHCSEEEECCS----------SHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred             CC-HHHHHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHhCC-CEEEEec
Confidence            32 2445666777888887753          22333456666677665 4555543

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.71  E-value=0.0027  Score=58.50  Aligned_cols=66  Identities=23%  Similarity=0.302  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .|+|.|+|+ |.+|..++..|.+.|++|.+++|+.+.. +.+...++..       ..++.++++++|+||-+..
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~-------~~~~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKC-DLFIQEGARL-------GRTPAEVVSTCDITFACVS   95 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGG-HHHHHTTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHcCCEE-------cCCHHHHHhcCCEEEEeCC
Confidence            478999995 9999999999999999999999975433 2233334432       2346677788999999875

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.70  E-value=0.0025  Score=58.69  Aligned_cols=100  Identities=16%  Similarity=0.123  Sum_probs=64.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cc------cCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR------DWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~------~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |+|.|+| +|.+|..++..|++.|  ++|.+++|+.+.....   +.      ...+.....   |   + ++++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCEE
Confidence            6899999 6999999999999999  8999999974322111   11      011222222   2   3 467899999


Q ss_pred             EECCCCCC-----C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGRP-----E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~~-----~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |-+++...     +    .+....|......+++.+.+...+ .+|.+|
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99988422     1    122235666667788887776543 344433

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.70  E-value=0.0018  Score=60.09  Aligned_cols=72  Identities=29%  Similarity=0.348  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC--CcHHHHh-cCCCEEEECCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP--ETIPATL-VGVHTVIDCATG  158 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~--~~l~~~~-~~~d~Vi~~a~~  158 (399)
                      +|||+||+|.+|..+++.+...|.+|++++++.++ .+.++..+...+ .|..+.  +.+.+.- .++|+||+++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~-~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-HDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-HHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            69999999999999999999999999999997443 344455665433 344443  1122221 268999999983

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.69  E-value=0.00044  Score=63.03  Aligned_cols=74  Identities=16%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCc-----EEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v-----~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      .+..++++|+|+ |.+|+.++..|++.| +|++..|+.++........+.     ..+.+|+.+   +.+.+.++|+||+
T Consensus       125 ~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn  199 (287)
T 1nvt_A          125 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIIN  199 (287)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEE
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEE
Confidence            355689999998 599999999999999 999999974432221111000     001234333   2345678999999


Q ss_pred             CCCC
Q 015872          155 CATG  158 (399)
Q Consensus       155 ~a~~  158 (399)
                      +++.
T Consensus       200 ~ag~  203 (287)
T 1nvt_A          200 ATPI  203 (287)
T ss_dssp             CSCT
T ss_pred             CCCC
Confidence            9984

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=96.69  E-value=0.0086  Score=54.40  Aligned_cols=89  Identities=19%  Similarity=0.155  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      .++|+|+|+||.+|+.+++.|.+.|+++...+.. .+....  ..++.+       ..++.++.+  ++|+++.+...  
T Consensus         7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p-~~~g~~--~~G~~v-------y~sl~el~~~~~~D~viI~tP~--   74 (288)
T 2nu8_A            7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP-GKGGTT--HLGLPV-------FNTVREAVAATGATASVIYVPA--   74 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT-TCTTCE--ETTEEE-------ESSHHHHHHHHCCCEEEECCCG--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC-Ccccce--eCCeec-------cCCHHHHhhcCCCCEEEEecCH--
Confidence            4689999999999999999999989986544443 211010  123222       234667776  89999998652  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                               .....+++.|.+.|++.+|.+++
T Consensus        75 ---------~~~~~~~~ea~~~Gi~~iVi~t~   97 (288)
T 2nu8_A           75 ---------PFCKDSILEAIDAGIKLIITITE   97 (288)
T ss_dssp             ---------GGHHHHHHHHHHTTCSEEEECCC
T ss_pred             ---------HHHHHHHHHHHHCCCCEEEEECC
Confidence                     33667888888999977676664

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.69  E-value=0.0022  Score=59.38  Aligned_cols=100  Identities=14%  Similarity=0.102  Sum_probs=64.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCcccc---cc-----CCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFL---RD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l---~~-----~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      |+|.|+|+ |.+|..++..|+..|+  +|.+++++.+......   ..     ....+..   +|    .++++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d----~~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GD----YADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CC----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CC----HHHhCCCCEEE
Confidence            57999998 9999999999999999  9999999743221110   00     0122221   22    23578999999


Q ss_pred             ECCCCCCCC-----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          154 DCATGRPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       154 ~~a~~~~~~-----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      .+++.....     +....|....+.+++.+.+.... .+|.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999843321     22234566677788887776543 444443

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.68  E-value=0.0021  Score=63.04  Aligned_cols=76  Identities=13%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccccccCCcEEEE------------ccCCCCCcHHHHh
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVN------------ADLSKPETIPATL  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~l~~~~v~~~~------------~Dl~d~~~l~~~~  146 (399)
                      +++|+|.|+|+ |++|..++..|++.  |++|++++|+.++.. .+......+..            +.+.-..++.+++
T Consensus         7 ~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~-~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~   84 (481)
T 2o3j_A            7 GKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKIA-EWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAI   84 (481)
T ss_dssp             CCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHH-HHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHH-HHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHh
Confidence            44579999996 99999999999998  799999999743322 12211110000            0111122355677


Q ss_pred             cCCCEEEECCCC
Q 015872          147 VGVHTVIDCATG  158 (399)
Q Consensus       147 ~~~d~Vi~~a~~  158 (399)
                      +++|+||-|.+.
T Consensus        85 ~~aDvvii~Vpt   96 (481)
T 2o3j_A           85 AEADLIFISVNT   96 (481)
T ss_dssp             HHCSEEEECCCC
T ss_pred             hcCCEEEEecCC
Confidence            889999999873

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.66  E-value=0.0062  Score=55.25  Aligned_cols=36  Identities=17%  Similarity=0.252  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPR  117 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~  117 (399)
                      ....+|+|+|+ |.+|..+++.|+..| -++++++.+.
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            34568999997 999999999999998 4788888764

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.66  E-value=0.0011  Score=58.85  Aligned_cols=66  Identities=12%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC----cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY----DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~----~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      +|+|.|+| .|.+|..+++.|++.|+    +|.+.+|++++........++..       ..+..++++++|+||-+.
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT-------TTDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE-------CSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE-------eCChHHHHHhCCEEEEEe
Confidence            46899999 59999999999999998    99999998544332222224432       234667788899999987

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.66  E-value=0.0018  Score=60.67  Aligned_cols=69  Identities=20%  Similarity=0.266  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...+|||+|+ |-+|...++.+...|.+|++++++.++ .+.+++.+...+.   .+.+.+.+   ++|+||+++|.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~-~~~~~~lGa~~v~---~~~~~~~~---~~D~vid~~g~  244 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHK-KQDALSMGVKHFY---TDPKQCKE---ELDFIISTIPT  244 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTT-HHHHHHTTCSEEE---SSGGGCCS---CEEEEEECCCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHhcCCCeec---CCHHHHhc---CCCEEEECCCc
Confidence            3578999997 999999999999999999999987544 4455666765544   34443332   89999999984

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.65  E-value=0.0035  Score=60.50  Aligned_cols=71  Identities=21%  Similarity=0.273  Sum_probs=54.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~  157 (399)
                      +|+|||+|+ |.+|..+++.|.+.|++|++++..+......+   .-+.+..|+.|.+.+.++++  ++|+|+...+
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e   91 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQV---AHRSYVGNMMDKDFLWSVVEREKPDAIIPEIE   91 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHH---SSEEEESCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh---cceEEECCCCCHHHHHHHHHHcCCCEEEECcc
Confidence            478999987 89999999999999999999997644322111   23466788888887777775  8999987653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.65  E-value=0.011  Score=55.47  Aligned_cols=98  Identities=7%  Similarity=0.105  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccc----------------------ccc--C--CcEEEEc
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LRD--W--GATVVNA  134 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~----------------------l~~--~--~v~~~~~  134 (399)
                      ...+|+|+|+ |.+|..++..|+..|. ++++++++.-+....                      +..  .  .++.+..
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  195 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL  195 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence            3568999998 8899999999999994 788888864221110                      000  1  2455666


Q ss_pred             cCCCCCcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       135 Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      ++.+...+.. ++++|+||++..  +..       ..-..+-++|.+.++ .+|+.+
T Consensus       196 ~i~~~~~~~~-~~~~DlVvd~~D--n~~-------~~r~~ln~~c~~~~~-p~i~~~  241 (353)
T 3h5n_A          196 NINDYTDLHK-VPEADIWVVSAD--HPF-------NLINWVNKYCVRANQ-PYINAG  241 (353)
T ss_dssp             CCCSGGGGGG-SCCCSEEEECCC--CST-------THHHHHHHHHHHTTC-CEEEEE
T ss_pred             ccCchhhhhH-hccCCEEEEecC--ChH-------HHHHHHHHHHHHhCC-CEEEEE
Confidence            6765554666 889999999753  111       022345678888887 566554

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.63  E-value=0.0063  Score=59.10  Aligned_cols=75  Identities=20%  Similarity=0.083  Sum_probs=56.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC---CCccccccCCcEEEEccCCCCCcHHHHhcC-CCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWGATVVNADLSKPETIPATLVG-VHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~---~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~-~d~Vi~~  155 (399)
                      .+++++|+|+|. |..|..+++.|.++|++|.+.+++..   ...+.|...++++..+.-  ++   ..+.+ +|.||..
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~--~~---~~~~~~~d~vv~s   79 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH--PL---ELLDEDFCYMIKN   79 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCC--CG---GGGGSCEEEEEEC
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCC--hH---HhhcCCCCEEEEC
Confidence            345689999998 88999999999999999999998642   223456667888887753  22   23456 8999998


Q ss_pred             CCCCC
Q 015872          156 ATGRP  160 (399)
Q Consensus       156 a~~~~  160 (399)
                      .|..+
T Consensus        80 pgi~~   84 (451)
T 3lk7_A           80 PGIPY   84 (451)
T ss_dssp             TTSCT
T ss_pred             CcCCC
Confidence            88433

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.63  E-value=0.00087  Score=63.00  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=50.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--------CcEEEEccCCCCCcHHHHhcCCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--------GATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--------~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      .+++|+|.|+|+ |.+|..++..|++.|++|++.+|+++.. +.+...        ++.. ...+.-..++.++++++|+
T Consensus        26 ~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~-~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv  102 (356)
T 3k96_A           26 EPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHV-DEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD  102 (356)
T ss_dssp             -CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHH-HHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred             cccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence            344578999997 9999999999999999999999974321 111111        1110 0111112457778899999


Q ss_pred             EEECCC
Q 015872          152 VIDCAT  157 (399)
Q Consensus       152 Vi~~a~  157 (399)
                      ||-+..
T Consensus       103 VilaVp  108 (356)
T 3k96_A          103 ILIVVP  108 (356)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999864

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.63  E-value=0.0011  Score=61.35  Aligned_cols=102  Identities=16%  Similarity=0.119  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccc---ccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~---l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      +++|.|+|+ |.+|..++..|+..|+ +|.+++++.+.....   +..      ....+..     ..++ ++++++|+|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~a~~~aDiV   76 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-----TDDY-ADISGSDVV   76 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEE
Confidence            368999998 9999999999999998 999999975432211   000      0111111     1224 568899999


Q ss_pred             EECCCCCC-C----CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGRP-E----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~~-~----~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |-+++... +    .+....|....+.+++.+.+.... .++.+|
T Consensus        77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99997321 1    111234556667777777766433 344444

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.62  E-value=0.001  Score=61.31  Aligned_cols=101  Identities=14%  Similarity=0.069  Sum_probs=64.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCCCCCccc---cccC------CcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADF---LRDW------GATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~~~~~~~---l~~~------~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |+|.|+|+ |.+|..++..|+..  |++|.+++++.+.....   +...      ...+..     ..++.+ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-----SNDYAD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-----ESCGGG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-----CCCHHH-HCCCCEE
Confidence            57999998 99999999999985  79999999985432211   1110      111111     122333 7899999


Q ss_pred             EECCCCCCC-C----cchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGRPE-E----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~~~-~----~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |-+++.... .    +....|......+++.+.+...+ .++.+|
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999983211 1    12235667777888888777533 455554

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.60  E-value=0.0029  Score=55.01  Aligned_cols=72  Identities=19%  Similarity=0.302  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+..++|||+|| |-+|...++.|++.|.+|++++....+....+. ..+++++..++.+     +.+.++|.||-+.+
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaAT~  100 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVATN  100 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEECCC
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEECCC
Confidence            345688999998 999999999999999999999876433222222 2357777776643     23678999986644

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.60  E-value=0.0012  Score=62.14  Aligned_cols=74  Identities=23%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccC------------------CCCCcHH
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL------------------SKPETIP  143 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl------------------~d~~~l~  143 (399)
                      ...+|+|+|+ |.+|..+++.|...|.+|++++|+... .+.+...+.+++..|.                  .+.+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~-l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEV-AEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGG-HHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            4578999998 999999999999999999999998543 2334445666554331                  0123567


Q ss_pred             HHhcCCCEEEECCC
Q 015872          144 ATLVGVHTVIDCAT  157 (399)
Q Consensus       144 ~~~~~~d~Vi~~a~  157 (399)
                      ++++++|+||.++.
T Consensus       261 e~l~~aDIVI~tv~  274 (381)
T 3p2y_A          261 DAITKFDIVITTAL  274 (381)
T ss_dssp             HHHTTCSEEEECCC
T ss_pred             HHHhcCCEEEECCC
Confidence            78899999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	399
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-24
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-24
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-23
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-23
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-13
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-11
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-09
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-06
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-06
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-05
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-05
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-04
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-04
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-04
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-04
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-04
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	7e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.001
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.001
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.002
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.002
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.002
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	0.002
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	0.003
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.003
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.003
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.003
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.003
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.003
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.004
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	0.004
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.004
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.004
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.004
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	0.004
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.004
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	0.004

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score =  100 bits (249), Expect = 1e-24
 Identities = 50/317 (15%), Positives = 113/317 (35%), Gaps = 36/317 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP-------RPAPADFLRDWGATVVNADLSK 138
           +L+VG TG +G++IV  ++  G+    L RP       +     + +  GA ++ A L  
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65

Query: 139 PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH 198
            + +   L  V  VI    G           +   A     +A  I++++          
Sbjct: 66  HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA---IKEAGNIKRFLPSEFGMDPDI 122

Query: 199 PE------VPLMEIKYCTEQFLQDSGLPHVIIR---LCGFMQGLIGQYAVPIL--EEKSV 247
            E            K    + ++ + +P+  +      G+  G + Q    ++   +K +
Sbjct: 123 MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVL 182

Query: 248 WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERLAGQD 306
              D   +  ++D  D+   T  ++ + +   +T+    P    + +EVI + ERL+ Q+
Sbjct: 183 IYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQN 242

Query: 307 ANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKD 366
            +   +            +   +   +     +      D       +       ++A  
Sbjct: 243 LDKIYISSQDF---LADMKDKSYEEKIVRCHLYQIFFRGDL-----YNFEIGPNAIEATK 294

Query: 367 I------ITLEKYLQDY 377
           +      +T++ YL+ Y
Sbjct: 295 LYPEVKYVTMDSYLERY 311

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 98.7 bits (244), Expect = 6e-24
 Identities = 55/311 (17%), Positives = 111/311 (35%), Gaps = 29/311 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--------FLRDWGATVVNADLS 137
           IL++GATG +GR + + +LD G+    LVR   A ++          +  GA +V+  + 
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65

Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
              ++   +  V  VI        E    +    K              +     +    
Sbjct: 66  DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE--FGNDVDNVHAV 123

Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAL---- 253
            P   + E+K    + ++  G+P+  +    F    +   A   L          L    
Sbjct: 124 EPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGN 183

Query: 254 TRIAYMDTQDIARLTFVALRNEKINGRTLTFSGP-RAWTTQEVITLCERLAGQDANVTMV 312
            R+ ++  +DI   T  A+ + +   +TL    P    +  E++ L E+   +      V
Sbjct: 184 ARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYV 243

Query: 313 PVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDI----- 367
           P   +      T F     +++  ++ S  +  D       +      GV+A  +     
Sbjct: 244 PEEEVLKLIADTPFPA---NISIAISHSIFVKGDQ-----TNFEIGPAGVEASQLYPDVK 295

Query: 368 -ITLEKYLQDY 377
             T+++YL ++
Sbjct: 296 YTTVDEYLSNF 306

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (233), Expect = 3e-23
 Identities = 45/208 (21%), Positives = 74/208 (35%), Gaps = 17/208 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GATG  G   + +A+  GY+V  LVR   +         A VV  D+ +   +  T
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
           + G   VI     R +     V  EG   ++   KA G+ K V  +       P      
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR 124

Query: 206 IKYC------TEQFLQDSGLPHVIIRLCGFMQG-LIGQYAVPILEEKSVWGTDALTRIAY 258
           ++          + L++SGL +V +         L G Y V +         D       
Sbjct: 125 LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTL---------DGRGPSRV 175

Query: 259 MDTQDIARLTFVALRNEKINGRTLTFSG 286
           +   D+       L  ++ +G +   S 
Sbjct: 176 ISKHDLGHFMLRCLTTDEYDGHSTYPSH 203

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 97.4 bits (241), Expect = 3e-23
 Identities = 45/250 (18%), Positives = 73/250 (29%), Gaps = 23/250 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGATVVNADLSKP-ETI 142
           I VVGATG  G  ++R A   G+ VR  V         +       T+    L      +
Sbjct: 6   IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 65

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP--- 199
                G H      T +  + I          L   AK  G  ++  YS           
Sbjct: 66  DTLFEGAHLAFINTTSQAGDEIAIGKD-----LADAAKRAGTIQHYIYSSMPDHSLYGPW 120

Query: 200 -EVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAY 258
             VP+   K+  E +++  GLP   +    +              E    GT        
Sbjct: 121 PAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFD 180

Query: 259 MDT--------QDIARLTFVALRN--EKINGRTLTFSGPRAWTTQEVITLCERLAGQDAN 308
            D          D+        ++  +K NG  +  +     +  +V     R   +   
Sbjct: 181 PDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET-LSPVQVCAAFSRALNRRVT 239

Query: 309 VTMVPVSVLR 318
              VP   ++
Sbjct: 240 YVQVPKVEIK 249

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 2e-13
 Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 44/267 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           IL+ G  G +G  +  + + +G++V  +          +  W     N +L   + +   
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEPL 62

Query: 146 LVGVHTVIDCA-----TGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYS----IHN 194
            + V  +   A           PIK  K +  G + ++  AK +G  + +  S      +
Sbjct: 63  YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD 121

Query: 195 CDKHPEV--------------PLMEIKYCTEQFLQD----SGLPHVIIRLC--------G 228
            + HP+                  E K   E          G+   + R+          
Sbjct: 122 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 181

Query: 229 FMQGLIGQYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG 286
               ++  + +  L+ +   V+G+ + TR A+    D+       +         +    
Sbjct: 182 NDGRVVSNFILQALQGEPLTVYGSGSQTR-AFQYVSDLVNGLVALM--NSNVSSPVNLGN 238

Query: 287 PRAWTTQEVITLCERLAGQDANVTMVP 313
           P   T  E   L + L G  + +  + 
Sbjct: 239 PEEHTILEFAQLIKNLVGSGSEIQFLS 265

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 61.4 bits (148), Expect = 3e-11
 Identities = 49/266 (18%), Positives = 82/266 (30%), Gaps = 45/266 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-----------PRPAPADFLRDWGATVVNA 134
           +LV G  G +G   VR+ L   Y                   R   A    D     V+ 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 135 DLSKPETIPATLVGVHTVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           D+     +   L GV  ++  A                + + +G   L+QCA   G+ + 
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122

Query: 188 VFYSIHN-CDKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIRLC--- 227
           V  S +            E             K  ++   +      GL   I R C   
Sbjct: 123 VHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNY 182

Query: 228 ---GFMQGLIGQYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTL 282
                 + LI  +   +L+  +  ++G  A  R  ++ T D  R   + L   +  G   
Sbjct: 183 GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR-EWVHTDDHCRGIALVLAGGR-AGEIY 240

Query: 283 TFSGPRAWTTQEVITLCERLAGQDAN 308
              G    T +E+  +     G D +
Sbjct: 241 HIGGGLELTNRELTGILLDSLGADWS 266

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.6 bits (140), Expect = 1e-10
 Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 1/202 (0%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R        A+L      
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                             EE  + VD++  +A+ + A  MG + Y+  S    D    + 
Sbjct: 62  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIF 121

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQ 262
              +K   EQ LQ+ G P + I     + G   ++ +  +    +       +   ++  
Sbjct: 122 YNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARI-LPGKYHGIEAC 180

Query: 263 DIARLTFVALRNEKINGRTLTF 284
           D+AR  +     E    R +  
Sbjct: 181 DLARALWRLALEEGKGVRFVES 202

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.1 bits (141), Expect = 1e-10
 Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 31/245 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA+G  G+ + ++  +           R A         A V   D++  ++I   
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 65

Query: 146 LVGVHTVIDCATGR--------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
             G+  ++   +          P +  +           +    +G +  +  +     K
Sbjct: 66  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125

Query: 198 H-------------------PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYA 238
           H                       ++  K   EQ+L DSG P+ IIR  G +    G   
Sbjct: 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE 185

Query: 239 VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITL 298
           + + ++  +  T        +   D+A +   AL  E+   +          T+      
Sbjct: 186 LLVGKDDELLQT----DTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 241

Query: 299 CERLA 303
               +
Sbjct: 242 KALFS 246

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 55.4 bits (132), Expect = 4e-09
 Identities = 45/288 (15%), Positives = 84/288 (29%), Gaps = 60/288 (20%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLV------RPRPAPADFLRDWGATVVNADLSKP 139
           +LV G +G +G     + L  G+DV  L       R      + L     T V  D+   
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 140 ETIPA--TLVGVHTVIDCA-----TGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFY 190
             +        + TVI  A         ++P++    +  G + LI   +A  ++ ++F 
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122

Query: 191 SI--------------HNCDKHPEVPLMEIKYCTEQFLQD-----SGLPHVIIRLC---- 227
           S                     P+ P  + K   EQ L D           ++R      
Sbjct: 123 SSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVG 182

Query: 228 ------------GFMQGLIGQYAVPILEEK---SVWGTDALTR-------IAYMDTQDIA 265
                       G    L+   A   +  +   +++G D  T          ++      
Sbjct: 183 AHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADG 242

Query: 266 RLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
            +  +     K              +  +V+    +  G+  N    P
Sbjct: 243 HVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP 290

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.4 bits (127), Expect = 2e-08
 Identities = 35/273 (12%), Positives = 68/273 (24%), Gaps = 49/273 (17%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GA G +   I RR   EG+ V      +                 DL   E     
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF-CDEFHLVDLRVMENCLKV 76

Query: 146 LVGVHTVIDC--------ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
             GV  V +                 I   +      +I+ A+  GI+++ + S      
Sbjct: 77  TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136

Query: 198 HPEVPLMEI--------------------KYCTEQFLQD----SGLPHVIIRLCGFMQG- 232
             +                          K  TE+  +      G+   I R        
Sbjct: 137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPF 196

Query: 233 ------------LIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGR 280
                          + A    +   +WG    TR ++    +         +++     
Sbjct: 197 GTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR-SFTFIDECVEGVLRLTKSDF--RE 253

Query: 281 TLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
            +        +  E+  +      +   +  +P
Sbjct: 254 PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP 286

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (121), Expect = 4e-08
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 9/206 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+ ++GA+G  GR +++  L++G    V  + R R    D            D  K +  
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEEAYKNVNQEVVDFEKLDDY 74

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNCDKH 198
            +   G      C      +   +          +   + AKA G + +   S    DK 
Sbjct: 75  ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 199 PEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWG--TDALTRI 256
                +++K   E  +++       +   G +     +        +  +G   D+    
Sbjct: 135 SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASG 194

Query: 257 AYMDTQDIARLTFVALRNEKINGRTL 282
             +    + R     +   +     L
Sbjct: 195 HSVPVVTVVRAMLNNVVRPRDKQMEL 220

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 48.2 bits (114), Expect = 9e-07
 Identities = 55/371 (14%), Positives = 107/371 (28%), Gaps = 85/371 (22%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------ADFLRDWGATVVNADLSKP 139
           IL+ G  G +G  +VR  +    D    +            +D          +AD+   
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 140 ETIPATL--VGVHTVIDCA--TGRP---EEPIK--KVDWEGKVALIQCAKAMGIQ----- 185
             I           V+  A  +        P    + +  G  AL++ A+          
Sbjct: 63  AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122

Query: 186 ----KYVFYS----------IHNCDKHPEVPLMEI-------------KYCTEQFLQD-- 216
               ++   S              +    +PL                K  ++  ++   
Sbjct: 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR 182

Query: 217 --SGLPHVIIRLC------GFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIAR 266
              GLP ++           F + LI    +  LE K   ++G     R  ++  +D AR
Sbjct: 183 RTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIR-DWLYVEDHAR 241

Query: 267 LTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRF 326
              + +   K  G T    G       +V+               +   +     + T +
Sbjct: 242 ALHMVVTEGK-AGETYNIGGHNEKKNLDVV-------------FTICDLLDEIVPKATSY 287

Query: 327 FEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQ---DYFTNILK 383
            E    VADR         D        +    LG       T E  ++   +++    +
Sbjct: 288 REQITYVADRPGHDRRYAIDA------GKISRELGWKPL--ETFESGIRKTVEWYLANTQ 339

Query: 384 KLKDLKAQSKQ 394
            + ++K+ + Q
Sbjct: 340 WVNNVKSGAYQ 350

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-------TVVNADLSK 138
           +LV GA G +   +V + L+ GY VR   R     A+  + W A       T V  D+ K
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73

Query: 139 PETI 142
               
Sbjct: 74  QGAY 77

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (111), Expect = 2e-06
 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 54/272 (19%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA----------PADFLRDWGATVVNAD 135
            L+ G TG  G  +    L++GY+V  + R   +                +    +   D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 136 LSKPETIPATL-------VGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQK 186
           LS    +   L       V     +       E P     VD  G + L++  + +G++K
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 187 ---YVFYSIHNC-DKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIRL 226
              +   S         E+P  E             K        +     G+      L
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183

Query: 227 ---------CGFMQGLIGQYAVPILEEKS---VWGTDALTRIAYMDTQDIARLTFVALRN 274
                      F+   I +    I +        G     R  +   +D  ++ ++ L+ 
Sbjct: 184 FNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR-DWGHAKDYVKMQWMMLQQ 242

Query: 275 EKINGRTLTFSGPRAWTTQEVITLCERLAGQD 306
           E+        +    ++ ++ + +     G  
Sbjct: 243 EQ--PEDFVIATGVQYSVRQFVEMAAAQLGIK 272

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 46.4 bits (109), Expect = 3e-06
 Identities = 36/274 (13%), Positives = 64/274 (23%), Gaps = 51/274 (18%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           + + G  G +G  I R+    G     L          L D  A  V+   +        
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELN---LLDSRA--VHDFFASERIDQVY 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-DKHPEVPLM 204
           L         A           +   +  +I  A    + K +F        K  + P+ 
Sbjct: 60  LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA 119

Query: 205 EI-----------------KYCTEQFLQD----SGLPHVIIRL---CGFMQGLIGQYAVP 240
           E                  K    +  +      G  +  +      G         +  
Sbjct: 120 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHV 179

Query: 241 I--------------LEEKSVWGTDALTR-------IAYMDTQDIARLTFVALRNEKING 279
           I                +  VWG+    R       +A      +     V L N +   
Sbjct: 180 IPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPML 239

Query: 280 RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
             +        T +E+     ++ G    V    
Sbjct: 240 SHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 273

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.2 bits (104), Expect = 9e-06
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +L+ GA   +GR  +     EG  +           +     GA  V  D++ P      
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERG 67

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                A L  +  V+  A    +    K+  E
Sbjct: 68  FAEALAHLGRLDGVVHYAGITRDNFHWKMPLE 99

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 45.0 bits (105), Expect = 9e-06
 Identities = 33/278 (11%), Positives = 75/278 (26%), Gaps = 50/278 (17%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGATVVNADLSK 138
           +I+V G  G +G   V    +   DV   V  +   A      + +      +V  D++ 
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 139 PETIPATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
            E +         ++  A                    +      +A       F+ +  
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 195 CDKHPEVPLMEI---------------------------KYCTEQFLQD----SGLPHVI 223
            + + ++PL E                            K  ++  ++      G+   I
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATI 183

Query: 224 IRLC---GFMQGLIGQYAVPIL-----EEKSVWGTDALTRIAYMDTQDIARLTFVALRNE 275
                  G  Q +       I       +  ++G     R  ++ T D +   +  L   
Sbjct: 184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVR-DWIHTNDHSTGVWAILTKG 242

Query: 276 KINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
           ++    L  +       + +  + E++         V 
Sbjct: 243 RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT 280

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.6 bits (104), Expect = 1e-05
 Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 49/285 (17%)

Query: 80  PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR------------------PRPAPA 121
           P +P   L+ G  G +G  ++   L     V  L                     + +  
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 122 DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA 181
            F++     + + + +               +  +   P       + +G + ++  A+ 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATNIDGFLNMLIAARD 131

Query: 182 MGIQKYVFY-SIHNCDKHPEVPLME------------IKYCTEQFLQD----SGLPHVII 224
             +Q + +  S      HP +P +E             KY  E +        G   + +
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191

Query: 225 RLC----------GFMQGLIGQYAVPILEEKS--VWGTDALTR-IAYMDTQDIARLTFVA 271
           R            G    +I ++   +++     + G    +R   Y++    A L    
Sbjct: 192 RYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAAT 251

Query: 272 LRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSV 316
              +  N       G R    Q    L + LA    +    PV  
Sbjct: 252 AGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR 296

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 19/92 (20%), Positives = 26/92 (28%), Gaps = 8/92 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +LV G    +GR I +    EG  V  L   RP   +     G      DL         
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALV-ALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRF 66

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                  L  V  +++ A          V   
Sbjct: 67  VEEAAYALGRVDVLVNNAAIAAPGSALTVRLP 98

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 4/97 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPA 144
            LV GA   +GR  V+     G  V  + R         ++  G   V  DL   +    
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 67

Query: 145 TL---VGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
            L     V  +++ A     +P  +V  E        
Sbjct: 68  ALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSV 104

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.5 bits (101), Expect = 2e-05
 Identities = 33/246 (13%), Positives = 51/246 (20%), Gaps = 17/246 (6%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++LV G TG +G QI R     G     LV      AD   +               + A
Sbjct: 11  TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGEL-----------VAELEA 59

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
                       T R             V L     A              ++       
Sbjct: 60  LGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRA 119

Query: 205 EIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDI 264
           ++            L      L        G   +           D L +    D    
Sbjct: 120 KVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG-YAPGNAYLDGLAQQRRSDGLPA 178

Query: 265 ARLTFVALRN----EKINGRTLTFSGPRAWTTQEVITLCER-LAGQDANVTMVPVSVLRF 319
             + +         E          G      +      +  L   +    ++ V   RF
Sbjct: 179 TAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVCPIVIDVRWDRF 238

Query: 320 TRQLTR 325
               T 
Sbjct: 239 LLAYTA 244

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (97), Expect = 7e-05
 Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 15/139 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR------PRPAPADFLRDWGATVVNADLSKP 139
           +LV G  G +G   V   ++ GYD               A  + L          DL   
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 140 ETI--PATLVGVHTVIDCA-------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY 190
           + +        + +VI  A       + +        +  G V L++  +   + K+VF 
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 191 SIHNCDKHPEVPLMEIKYC 209
           S              I   
Sbjct: 124 SSATVYGDATRFPNMIPIP 142

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 41.4 bits (97), Expect = 8e-05
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFLRDWG--ATVVNADLSKPE-- 140
            ++ G    +GR I  R   EG D+    + P P     +R+ G     V  D+S+P   
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDV 67

Query: 141 -----TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                 + +T      +++ A   P  P  ++ +E
Sbjct: 68  EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 102

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.6 bits (97), Expect = 8e-05
 Identities = 20/163 (12%), Positives = 42/163 (25%), Gaps = 10/163 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPE--- 140
            LV G    +G   VR  + EG  V               +    A  V+ D+++P    
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 68

Query: 141 ----TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC-AKAMGIQKYVFYSIHNC 195
               T      G+H +++ A       I+         ++      + +           
Sbjct: 69  AAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE 128

Query: 196 DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYA 238
                +  +         +   G       + G  +    +  
Sbjct: 129 AGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 171

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 41.2 bits (96), Expect = 9e-05
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPA 144
           +LV+ A+  +GR +      EG +V    R      + L+  G   V  DL K  + +  
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHRYVVCDLRKDLDLLFE 62

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWE 170
            +  V  ++  A G       ++  E
Sbjct: 63  KVKEVDILVLNAGGPKAGFFDELTNE 88

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 32/237 (13%), Positives = 58/237 (24%), Gaps = 13/237 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL------VRPRPAPADFLRDWGATVVNADLSKP 139
           IL+ GA G LGR+I ++   +  +V         +    A   F  +    VV    +  
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT 63

Query: 140 ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP 199
                           A G             ++  I        +     +  +     
Sbjct: 64  AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQ 123

Query: 200 EVPLMEIKYCTEQFLQDSGLPHVIIRLC---GFMQGLIGQYAVPILEEKSVWGTDALTRI 256
                + K   E F++     + I+R     G     +            +         
Sbjct: 124 SAY-GKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGT 182

Query: 257 AYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVP 313
                        V    ++ N  T   +     +  +      RL G D  VT   
Sbjct: 183 PTSTVDLAR---VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCT 236

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           +L++G  G +G  +  R L E  Y+V  L     A + FL       V  D+S     
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 15/128 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIP- 143
           +LV GA   +GR  V+     G  V  + R +      +R+  G   V  DL   E    
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69

Query: 144 --ATLVGVHTVIDCATGRPEEPIKKVDWE-----------GKVALIQCAKAMGIQKYVFY 190
              ++  V  +++ A     +P  +V  E             + + Q      I + V  
Sbjct: 70  ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129

Query: 191 SIHNCDKH 198
           +I N    
Sbjct: 130 AIVNVSSQ 137

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 9/95 (9%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE--- 140
           ++ +V       G     R  + G+ V C         D L  +  T         +   
Sbjct: 1   STAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAETYPQLKPMSEQEPA 59

Query: 141 ----TIPATLVGVHTVIDCA-TGRPEEPIKKVDWE 170
                + +    V  ++         +PI K   E
Sbjct: 60  ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVE 94

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPE--- 140
            LV G    +G ++V+  L EG  V        A      + G  +  V  D+S      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 141 ----TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                +   L  ++ +++ A       ++    E
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
           I+V G    +G    R     G +V  + R      +     G            D+S  
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 71

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           +        I A L  +  +I  A     +P  ++  E
Sbjct: 72  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 109

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 27/209 (12%), Positives = 68/209 (32%), Gaps = 28/209 (13%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRDW---GAT 130
           MSPG+      ++V GA   +G  +V++ + +      +   R    A  L+        
Sbjct: 1   MSPGS------VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVH 54

Query: 131 VVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF- 189
           V+   ++  +++   +               +  + V  +G   LI  A  +        
Sbjct: 55  VLPLTVTCDKSLDTFV--------------SKVGEIVGSDGLSLLINNAGVLLSYGTNTE 100

Query: 190 YSIHNCDKHPEVPLMEIKYCTEQFL---QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKS 246
            +     +  +V    +   T++ L   +++       +L      +I   +       +
Sbjct: 101 PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160

Query: 247 VWGTDALTRIAYMDTQDIARLTFVALRNE 275
             G+     +AY  ++    +    L  +
Sbjct: 161 TSGSAQFPVLAYRMSKAAINMFGRTLAVD 189

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
            LV G +  LG  I +   + G  V    R     ++  +               D+S  
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 67

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           E        +      + TV++ A      P ++   +
Sbjct: 68  EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 105

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
           ILV GA   +GR  +     EG  +  + R     A+ +      A  V AD+S P+ + 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVE 67

Query: 144 A-------TLVGVHTVIDCATGRPEEPIKKVDWE 170
           A           +H V   A          +  E
Sbjct: 68  AVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 101

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 29/176 (16%), Positives = 45/176 (25%), Gaps = 22/176 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
           +L+ G    LGR +V R + EG  V  L +     A+   D G     +  D+   E   
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLE--- 64

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
                                 K+D     A I       +           D+   + +
Sbjct: 65  ----DQKQAASRC----VARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116

Query: 204 MEIKYCTEQFL----QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTR 255
               +  +  L       G     I   GF     G          +      L R
Sbjct: 117 KGYIHAVKACLPALVASRGNVIFTISNAGFY-PNGGGPLYTA----AKHAIVGLVR 167

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 14/82 (17%)

Query: 74  NMSPGTPVRPTS-------ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 126
           +  PG P+ P S        LV GA   +GR++       G  V          A+ +  
Sbjct: 3   DAIPG-PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 61

Query: 127 W------GATVVNADLSKPETI 142
                   A  V A++   E I
Sbjct: 62  AIKKNGSDAACVKANVGVVEDI 83

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 3e-04
 Identities = 18/160 (11%), Positives = 32/160 (20%), Gaps = 14/160 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW----GATVVNADLSKPET 141
           + V G TG  G  +       G  V+      P             G      D+     
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNK 70

Query: 142 IP----------ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           +              +    ++  +   P E            L       G++  V  +
Sbjct: 71  LLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130

Query: 192 IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQ 231
              C  + E      +                  L     
Sbjct: 131 SDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSY 170

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 12/97 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPA 144
           ++V G    +G  IVR  ++ G  V    +         ++  GA  +  D+++ + +  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 68

Query: 145 TL-----------VGVHTVIDCATGRPEEPIKKVDWE 170
            +             V+        +  E      + 
Sbjct: 69  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR 105

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 24/187 (12%), Positives = 47/187 (25%), Gaps = 24/187 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ++V G  G LG  I+      GY V  +       AD        +V+ + +  E   + 
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSI 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF--YSIHNCDKHPEVPL 203
           L               E         +V  + C               + N D   +  +
Sbjct: 60  L---------------EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV 104

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQD 263
                  +          ++  L G    +    ++      +      LT         
Sbjct: 105 WSSAIAAKLATTHLKPGGLLQ-LTGAAAAMGPTPSMIG-YGMAKAAVHHLTSSLAAKDSG 162

Query: 264 IARLTFV 270
           +   + V
Sbjct: 163 LPDNSAV 169

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETI 142
           +++ G    LG +  R+A+  G  V          A   R+ G  A   + D++  E  
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDW 66

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 11/104 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG----ATVVNADLSKPE- 140
            ++ G T  +G  I  + ++EG  V    R         +  G          D S  + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG 68

Query: 141 ------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
                         V T+++ A     + +++        L+  
Sbjct: 69  WTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 39.7 bits (91), Expect = 4e-04
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 14/124 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-----GATVVNADLSKPE 140
           +L+ G  G LG  +   AL +G D+          A     W         V+ D+    
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62

Query: 141 TIPATLVGVH--TVIDCATGRP-----EEPIK--KVDWEGKVALIQCAKAMGIQKYVFYS 191
            +   +      +    A         + P    +++  G + L++  +       + YS
Sbjct: 63  DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYS 122

Query: 192 IHNC 195
             N 
Sbjct: 123 STNK 126

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPE 140
            LV G +  +G  IV      G  V    R +    D L  W +          DLS   
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 70

Query: 141 TIPATL--------VGVHTVIDCATGRPEEPIKKVDWE 170
                +          ++ +++ A     +  K    E
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE 108

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 18/165 (10%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG--ATVVNADLSKPE 140
            ++ GA   +G++I       G  V        A     D ++  G  A     D++  +
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73

Query: 141 TIPA-------TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH 193
            + A        L  V  +++ A G   +P      + + A      +      +     
Sbjct: 74  ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133

Query: 194 NCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYA 238
             +    +  +       + +  +            ++ +     
Sbjct: 134 EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 7e-04
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLRDWGATVVNADLSKPE 140
            LV G TG  G  + +  L++GY V  LV  R +       +   +      + D++   
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADAC 62

Query: 141 TIP 143
           ++ 
Sbjct: 63  SVQ 65

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 14/106 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG----ATVVNADLSK 138
            LV GA+G +G  + R  + +G  V    R        A   +  G          DLS 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 139 PE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQ 177
            E        I +   GV   I+ A     + +      G   +  
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 118

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
            L+ G+   +GR      + EG  V        A      + G  A  +  D++   +I 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASID 67

Query: 144 A 144
            
Sbjct: 68  R 68

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPE 140
            LV G +  +G  IV      G  V    R      + L  W            DL    
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 68

Query: 141 -------TIPATLVG-VHTVIDCATGRPEEPIKKVDWE 170
                  T+     G ++ +++ A     +  K    +
Sbjct: 69  ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK 106

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.002
 Identities = 44/354 (12%), Positives = 97/354 (27%), Gaps = 63/354 (17%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-----------GATVVNA 134
            L+ G TG  G  +    L++GY+V  +VR   +      +               +   
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 135 DLSKPETIPATLVGVHTVIDCATG---------RPEEPIKKVDWEGKVALIQCAKAMGIQ 185
           DL+    +   +  V        G            E    VD  G + L+   K  G+ 
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123

Query: 186 KYVFY----SIHNCDKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIR 225
             V +    +     K  E+P  E             K      + +      L  V   
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI 183

Query: 226 L---CGFMQGLIGQYAVPI---------LEEKSVWGTDALTRIAYMDTQDIARLTFVALR 273
           L       +G                    E    G     R  +   +D     ++ L+
Sbjct: 184 LFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR-DWGHAKDYVEAMWLMLQ 242

Query: 274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDV 333
           N++     +        + +E +       G+         + +   ++  +     +  
Sbjct: 243 NDEPEDFVIAT--GEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLK 300

Query: 334 ADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD 387
             R    + L  D       ++    L    +  +  ++ +++     ++ ++ 
Sbjct: 301 YYRPTEVDFLQGDC------TKAKQKLNWKPR--VAFDELVREMVHADVELMRT 346

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 20/106 (18%), Positives = 31/106 (29%), Gaps = 13/106 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRDWG--ATVVNADLSKP 139
            L  GA   +GR I       G  V          A+     L+  G     + AD+SKP
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 68

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
                      +   G+  V+  +         +V  E    +   
Sbjct: 69  SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNL 114

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-------GATVVNADLSK 138
            +V G+T  +G  I      +G D+        A  + +R               ADLSK
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

Query: 139 PETIPA 144
            E +  
Sbjct: 67  GEAVRG 72

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR 115
            L+ G TG  G  +    L +GY+V  L+R
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIR 33

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKP 139
           ++ V A G +G    R  +        ++     P               T    D++ P
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 140 --------ETIPATLVGVHTVIDCATGRPEEPIKK---VDWEGKVALIQCAKAMGIQKY 187
                   + I   L  V  +I+ A    +  I++   +++ G V           ++ 
Sbjct: 68  VAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRK 126

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 15/100 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG-----ATVVNADLS 137
           +++ G++  +GR        EG +V    R           +   G        V AD++
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 138 KPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
             +       +       +  +++ A     +       +
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD 107

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 8/93 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT--------VVNADLS 137
           +LV G  G LG + V+      + V  +       A        T         V A++ 
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVG 64

Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           K          +      A G  +      + +
Sbjct: 65  KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 97

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG-----ATVVNADLSKPE 140
           +LV G T  +G  IV      G  +    R      + L  W       T    D S   
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70

Query: 141 -------TIPATLVG-VHTVIDCATGRPEEPIKKVDWE 170
                  T+ +   G +  +I+       +P      E
Sbjct: 71  EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 108

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 11/88 (12%), Positives = 27/88 (30%), Gaps = 3/88 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA- 144
           I++  A   +G+        EG  V           +  +  G      D++K + I   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF 68

Query: 145 --TLVGVHTVIDCATGRPEEPIKKVDWE 170
              +  +  + + A       +   + +
Sbjct: 69  ANEVERLDVLFNVAGFVHHGTVLDCEEK 96

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 16/124 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +LV G    +G  I +R   +G+ V    R   AP       G   V  D++  +     
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRA 63

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVD---WEGKVALIQCAKAMGIQKYVFYSIHNC 195
              +      V  ++  A    +  + ++    +E  +           Q+       N 
Sbjct: 64  FTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK 123

Query: 196 DKHP 199
               
Sbjct: 124 FGRM 127

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG--ATVVNADLSKPE 140
            LV GA   +GR+I +        V C+ R + +     D ++ +G  ++    D+SK E
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE 72

Query: 141 TIPA 144
            I  
Sbjct: 73  EISE 76

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 36.4 bits (83), Expect = 0.004
 Identities = 25/192 (13%), Positives = 51/192 (26%), Gaps = 25/192 (13%)

Query: 87  LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-------RDWGATVVNADLSKP 139
           ++ G    +G  I  R   +G+ V    R     A  L       R   A +   DLS  
Sbjct: 5   VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 64

Query: 140 ETIP-----------ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV 188
            ++                    +++ A+     P+   D     A  +   A   + + 
Sbjct: 65  SSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124

Query: 189 FYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVW 248
             ++            + +    +    S +          + G             +  
Sbjct: 125 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM-------AKH 177

Query: 249 GTDALTRIAYMD 260
               LTR A ++
Sbjct: 178 ALGGLTRAAALE 189

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 12/127 (9%), Positives = 26/127 (20%), Gaps = 13/127 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
             + G    LG+ +       G       R                      +  D+  P
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 87

Query: 140 ETI-------PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI 192
           + +              + VI+ A G    P +++       +            +    
Sbjct: 88  DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK 147

Query: 193 HNCDKHP 199
                  
Sbjct: 148 QLIKAQK 154

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 36/230 (15%), Positives = 62/230 (26%), Gaps = 24/230 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL------------VRPRPAPADFLRDWGATVVN 133
           +LV G  G +G   V   L+ GY    +            +         L         
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 134 ADLSKPETIPATLVGVHTVIDC---ATGRPEEPIK------KVDWEGKVALIQCAKAMGI 184
            D+     +         +            E ++      +V+  G + L++  KA G+
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 185 QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVII--RLCGFMQGLIGQYAVPIL 242
           +  VF S      +P+   ++  + T       G     I   +    Q      AV +L
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV-LL 183

Query: 243 EEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTT 292
              +  G  A   I          L     +        L   G    T 
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKP 139
           ++V GA+  +G+ I       G  V          A+ +          A     D+SK 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 140 ETIPA 144
             + A
Sbjct: 64  ADVEA 68

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (83), Expect = 0.004
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL 113
           ++V+G  G  G         + Y+V  +
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIV 31

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW------GATVVNADLSKP 139
           +++ G++  LG+ +  R   E   V    R +   A+ + +        A  V  D++  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 140 ETIPA 144
             +  
Sbjct: 70  SDVIN 74

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 19/130 (14%), Positives = 34/130 (26%), Gaps = 5/130 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G LGR       + G  V                  A  V  ++ +       
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
                   +       +   ++D      ++  A  +  + +   S  + D    V L  
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRID-----VVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 206 IKYCTEQFLQ 215
               T     
Sbjct: 125 SFQVTRAAWD 134

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 10/134 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---------WGATVVNADL 136
           + ++G TG LG+ +  R    G+++    R R   A+                 + N D 
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSR-REEKAEAKAAEYRRIAGDASITGMKNEDA 61

Query: 137 SKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
           ++   I    +     ID A        +K+     V + + AK          +    +
Sbjct: 62  AEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE 121

Query: 197 KHPEVPLMEIKYCT 210
                 ++   +  
Sbjct: 122 VLESEKVVSALHTI 135

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.98
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.98
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.97
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.96
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.79
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.78
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.78
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.78
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.77
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.77
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.77
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.76
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.76
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.76
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.76
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.75
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.75
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.75
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.75
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.74
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.74
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.72
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.72
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.72
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.72
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.72
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.71
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.71
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.71
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.71
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.71
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.71
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.71
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.71
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.7
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.69
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.69
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.69
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.68
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.66
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.66
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.66
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.66
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.65
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.65
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.65
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.64
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.64
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.62
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.61
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.6
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.6
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.6
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.58
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.54
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.54
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.53
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.53
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.52
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.48
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.48
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.47
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.45
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.42
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.37
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.36
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.3
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.1
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.07
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.76
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.6
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.35
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.11
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.07
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.07
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.06
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.05
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.01
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.78
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.77
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.76
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.73
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.72
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.7
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.66
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.65
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.64
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.62
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.62
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.61
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.6
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.59
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.59
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.57
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.57
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.57
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.55
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.55
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.53
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.53
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.51
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.51
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.51
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.45
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.44
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.43
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.43
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.42
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.42
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.4
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.36
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.36
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.35
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.3
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.27
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.25
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.23
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.23
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.21
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.21
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.18
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	97.15
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.15
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.14
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	97.11
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.11
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.03
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.02
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.02
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.0
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.99
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.97
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.94
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.93
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.92
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.9
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.88
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.83
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.8
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.74
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.68
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.67
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.53
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.53
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.42
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.39
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.36
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.33
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.31
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.29
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.16
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.12
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.06
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.04
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.02
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.99
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.99
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.98
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.95
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.94
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.91
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.88
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.87
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.8
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.78
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.76
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	95.76
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.74
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.73
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.7
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.64
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.59
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.57
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.55
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.53
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.47
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.47
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.45
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.37
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.31
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.29
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.27
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.21
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.2
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.13
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.08
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.02
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.02
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.94
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.94
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.87
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.83
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.81
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.78
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.71
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.67
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.61
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.57
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.54
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.47
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.47
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.38
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.36
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.28
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.15
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.77
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.59
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.55
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.55
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.5
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.49
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.32
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.31
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.29
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.25
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.23
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.03
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.01
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.78
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	92.34
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.25
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.92
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.8
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.79
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.78
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.72
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.62
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.61
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.58
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.56
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.53
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.41
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	91.38
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.25
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.05
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.94
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.86
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.84
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.8
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.76
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.61
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.57
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.39
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.2
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.17
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.13
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.96
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.92
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	89.79
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.64
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.35
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	89.08
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.94
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.9
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	88.59
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.34
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	87.94
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	87.5
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	87.17
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.06
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	87.03
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.68
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.36
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	86.3
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.87
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.6
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.58
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	85.03
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.75
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.66
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	84.1
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	84.03
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.47
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.38
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	82.37
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	81.51
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.04
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	80.92
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.87
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.7
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.58
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	80.51
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.17
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.1

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-39  Score=308.34  Aligned_cols=275  Identities=16%  Similarity=0.140  Sum_probs=218.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC--
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR--  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~--  159 (399)
                      +.|||||||||||||++|+++|+++||+|++++|....... ......++..+|++|.+.+.++++++|+|||+|+..  
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG   92 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence            45789999999999999999999999999999986443221 223467899999999999999999999999999732  


Q ss_pred             ------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------------CCCCcHHHHHHHHHHH
Q 015872          160 ------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       160 ------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~~y~~~K~~~E~~  213 (399)
                            .+......|+.++.+++++|++.++++||++||..++.                    .|.++|+.+|..+|++
T Consensus        93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~  172 (363)
T d2c5aa1          93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEEL  172 (363)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHH
Confidence                  23345578999999999999999999999999976532                    3567899999999988


Q ss_pred             HH----hCCCCEEEEecCccccccccc------chhh-----hcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          214 LQ----DSGLPHVIIRLCGFMQGLIGQ------YAVP-----ILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       214 l~----~~g~~~~ilRp~~~~~~~~~~------~~~~-----~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      ++    +.|++++++||+++||.....      ....     .....  ..++++ .+.++|+|++|+++++..+++++ 
T Consensus       173 ~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~rd~i~v~D~~~~~~~~~~~~-  250 (363)
T d2c5aa1         173 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG-LQTRSFTFIDECVEGVLRLTKSD-  250 (363)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCS-CCEECCEEHHHHHHHHHHHHHSS-
T ss_pred             HHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCC-CeEEEEeehhHHHHHHHHHHhCC-
Confidence            74    469999999999999743211      1111     11111  234444 44559999999999999999875 


Q ss_pred             cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccccccc
Q 015872          277 INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSET  356 (399)
Q Consensus       277 ~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                       .+++||+++++.+|+.|+++++.+.+|.+.++..++...                            .......|.+++
T Consensus       251 -~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~----------------------------~~~~~~~d~ska  301 (363)
T d2c5aa1         251 -FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE----------------------------GVRGRNSDNNLI  301 (363)
T ss_dssp             -CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC----------------------------CCSBCEECCHHH
T ss_pred             -CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCC----------------------------CccccccCHHHH
Confidence             357999999999999999999999999988887765421                            111233688999


Q ss_pred             ccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          357 FDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       357 ~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      +++|||+|+  ++++|+|+++++||++++++.+.
T Consensus       302 ~~~LGw~p~--~sleegi~~ti~w~~~~~~~~~~  333 (363)
T d2c5aa1         302 KEKLGWAPN--MRLKEGLRITYFWIKEQIEKEKA  333 (363)
T ss_dssp             HHHHSCCCC--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCC--CCHHHHHHHHHHHHHHHHHhhhc
Confidence            999999998  89999999999999998876444

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-40  Score=305.29  Aligned_cols=271  Identities=15%  Similarity=0.212  Sum_probs=208.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC---
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR---  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~---  159 (399)
                      +||||||||+||||++|+++|+++||+|++++|........+.. ......+|+.|.+.+..++.++|+|||+|+..   
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~   79 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-WIGHENFELINHDVVEPLYIEVDQIYHLASPASPP   79 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-GTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-hcCCCceEEEehHHHHHHHcCCCEEEECcccCCch
Confidence            47999999999999999999999999999999753333222211 11222334444444555667899999999832   


Q ss_pred             ----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC------------------CCCCcHHHHHHHHHHHHH--
Q 015872          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------------HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       160 ----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~------------------~~~~~y~~~K~~~E~~l~--  215 (399)
                          .+....++|+.|+.+|+++|++.++ ++||+||..++.                  .|.++|+.+|..+|.+++  
T Consensus        80 ~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~  158 (312)
T d2b69a1          80 NYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  158 (312)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence                2344568999999999999999997 899999975532                  245679999999999884  


Q ss_pred             --hCCCCEEEEecCcccccc--------cccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEE
Q 015872          216 --DSGLPHVIIRLCGFMQGL--------IGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLT  283 (399)
Q Consensus       216 --~~g~~~~ilRp~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~  283 (399)
                        +.|++++++||+++||+.        +..++.++..+.++  ++. +...++|+|++|+++++..+++...  +++||
T Consensus       159 ~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~-g~~~r~~i~v~D~~~~~~~~~~~~~--~~~~n  235 (312)
T d2b69a1         159 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNV--SSPVN  235 (312)
T ss_dssp             HHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESS-SCCEEECEEHHHHHHHHHHHHTSSC--CSCEE
T ss_pred             HHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCC-CCeeEccEEHHHHHHHHHHHHhhcc--CCceE
Confidence              579999999999999733        23345556666644  344 4555599999999999999987653  56899


Q ss_pred             EcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCC
Q 015872          284 FSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVD  363 (399)
Q Consensus       284 l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~  363 (399)
                      +++++.+++.++++.+++.+|.+.++...+...              .             ....+..|.++++++|||+
T Consensus       236 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------~-------------~~~~~~~d~~k~~~~lgw~  288 (312)
T d2b69a1         236 LGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--------------D-------------DPQKRKPDIKKAKLMLGWE  288 (312)
T ss_dssp             ESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT--------------T-------------CCCCCCBCCHHHHHHHCCC
T ss_pred             ecCCcccchhhHHHHHHHHhCCCCceEECCCCC--------------C-------------CCCeeeECHHHHHHHHCCC
Confidence            999999999999999999999988877654320              0             1122346789999999999


Q ss_pred             CCccccHHHHHHHHHHHHHHhhHH
Q 015872          364 AKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       364 p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      |+  ++++|+|+++++||+++++.
T Consensus       289 p~--~~l~~~I~~~i~w~~~~~~~  310 (312)
T d2b69a1         289 PV--VPLEEGLNKAIHYFRKELEY  310 (312)
T ss_dssp             CC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             CC--CCHHHHHHHHHHHHHHHHhh
Confidence            99  89999999999999887764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.9e-39  Score=304.08  Aligned_cols=276  Identities=20%  Similarity=0.241  Sum_probs=216.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEE------EecCCCC-C----ccccccCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRC------LVRPRPA-P----ADFLRDWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~------~~r~~~~-~----~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||||||||||||++|++.|+++||+|.+      +++.... .    .......+++++.+|+.+...+.....++|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            68999999999999999999999986544      4332111 1    11122347899999999999888888999999


Q ss_pred             EECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------CCCCCcHHHHHHHHHH
Q 015872          153 IDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       153 i~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~  212 (399)
                      +|+|+..       ......++|+.|+.+++++|++.++++|||+||..++             ..|.++|+.+|..+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999732       3455667999999999999999999999999998764             2356789999999998


Q ss_pred             HH----HhCCCCEEEEecCcccccc------cccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          213 FL----QDSGLPHVIIRLCGFMQGL------IGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       213 ~l----~~~g~~~~ilRp~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                      ++    ++.+++++++||+++||..      ++.++..+..+.++  ++. +++.++|+|++|+|+++..+++++. .++
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~-g~~~r~~i~v~D~a~ai~~~~~~~~-~~~  238 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGD-GANVREWVHTDDHCRGIALVLAGGR-AGE  238 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETT-SCCEEEEEEHHHHHHHHHHHHHHCC-TTC
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecC-CCeEEccEEHHHHHHHHHHHHhCCC-CCC
Confidence            87    4579999999999999743      22334555566643  444 4555599999999999999999876 478


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCeee-cCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANVTM-VPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDL  359 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      +||+++++.+++.|+++.+.+.+|.+.+.+. .+..                           ...+..+..|++++++.
T Consensus       239 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~d~~k~~~~  291 (322)
T d1r6da_         239 IYHIGGGLELTNRELTGILLDSLGADWSSVRKVADR---------------------------KGHDLRYSLDGGKIERE  291 (322)
T ss_dssp             EEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCC---------------------------TTCCCBCCBCCHHHHHH
T ss_pred             eeEEeecccchhHHHHHHHHHHhCCCccceeecCCC---------------------------CCCCceeeeCHHHHHHH
Confidence            9999999999999999999999998755332 2111                           01223345788999999


Q ss_pred             cCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          360 LGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       360 LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      |||+|+  ++++|+++++++|++++.+..+.
T Consensus       292 lg~~p~--~~~eegI~~~i~w~~~n~~~~~~  320 (322)
T d1r6da_         292 LGYRPQ--VSFADGLARTVRWYRENRGWWEP  320 (322)
T ss_dssp             HCCCCC--SCHHHHHHHHHHHHHHCHHHHGG
T ss_pred             HCCCCC--CCHHHHHHHHHHHHHHhHHhHhh
Confidence            999998  89999999999999987765443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-39  Score=305.34  Aligned_cols=275  Identities=19%  Similarity=0.246  Sum_probs=214.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc------cccccCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~------~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |||||||||||||++|++.|+++||+|++++|-.....      +.+...+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            67999999999999999999999999999987433221      12234579999999999999999998  79999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--------------CCCCCcHHHHHHHHHHHH
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--------------~~~~~~y~~~K~~~E~~l  214 (399)
                      |+..       .+...+++|+.|+.+++++|++.++++||++||..++              ..|..+|+.+|...|+++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            9832       2345678999999999999999999999999997653              245678999999999988


Q ss_pred             Hh-----CCCCEEEEecCcccccccc------------cc----hhhhcccc---ccccC-----CCCcceeceeHHHHH
Q 015872          215 QD-----SGLPHVIIRLCGFMQGLIG------------QY----AVPILEEK---SVWGT-----DALTRIAYMDTQDIA  265 (399)
Q Consensus       215 ~~-----~g~~~~ilRp~~~~~~~~~------------~~----~~~~~~~~---~~~~~-----~~~~~~~~v~v~Dva  265 (399)
                      .+     .+++++++|++++|+....            .+    ...+..+.   .+++.     .+.+..+|+|++|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            53     5899999999999963211            11    11112221   22232     234445999999999


Q ss_pred             HHHHHHHhC--CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhh
Q 015872          266 RLTFVALRN--EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVL  343 (399)
Q Consensus       266 ~~i~~~l~~--~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
                      .++..+...  ....+++||+++++.+|+.|+++.+.+.+|.+.++...+..              +.+           
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~--------------~~~-----------  295 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR--------------EGD-----------  295 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCC--------------TTC-----------
T ss_pred             hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCC--------------CCC-----------
Confidence            998887764  33346799999999999999999999999998887776532              111           


Q ss_pred             ccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          344 TSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       344 ~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                        ...+.+|+++++++|||+|+  ++++|+|+++++|++++.++
T Consensus       296 --~~~~~~d~~k~~~~lgwkp~--~~l~egi~~ti~w~~~~~~~  335 (338)
T d1udca_         296 --LPAYWADASKADRELNWRVT--RTLDEMAQDTWHWQSRHPQG  335 (338)
T ss_dssp             --CSBCCBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHCTTC
T ss_pred             --CCEeeECHHHHHHHHCCCcC--CCHHHHHHHHHHHHHhchhh
Confidence              12233688999999999998  89999999999999988664

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.1e-39  Score=303.99  Aligned_cols=297  Identities=15%  Similarity=0.152  Sum_probs=207.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC----Cc------cccccCCcEEEEccCCCCCcHHHHhcC--CCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA----PA------DFLRDWGATVVNADLSKPETIPATLVG--VHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~----~~------~~l~~~~v~~~~~Dl~d~~~l~~~~~~--~d~  151 (399)
                      |+|||||||||||++|+++|+++||+|++++|....    ..      ......+++++++|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            789999999999999999999999999999995321    11      111234789999999999999999984  699


Q ss_pred             EEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCc---EEEEecccCCC-------------CCCCCcHHHHHH
Q 015872          152 VIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNCD-------------KHPEVPLMEIKY  208 (399)
Q Consensus       152 Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~---~~V~~Ss~~~~-------------~~~~~~y~~~K~  208 (399)
                      |||+|+..       ++..++++|+.||.+|+++|++.+++   ||||+||..++             ..|.++|+.+|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            99999832       12345678999999999999998764   79999997653             235678999999


Q ss_pred             HHHHHHH----hCCCCEEEEecCcccccccc---------cchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          209 CTEQFLQ----DSGLPHVIIRLCGFMQGLIG---------QYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       209 ~~E~~l~----~~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      .+|++++    +.+++++++||+++||+...         ..+..+..+.  .+..+++++.++|+|++|+|+++..+++
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~  241 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ  241 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHh
Confidence            9998874    46899999999999985321         1222223333  2233345666699999999999999998


Q ss_pred             CCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHH-Hhhhhhh--hhhhhhhhhhhhhh---ccCc
Q 015872          274 NEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQ-LTRFFEW--TNDVADRLAFSEVL---TSDT  347 (399)
Q Consensus       274 ~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~---~~~~  347 (399)
                      ++  .+++||+++++.+|+.|+++++.+.+|...++...+......... .......  +.......  ....   ....
T Consensus       242 ~~--~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~  317 (357)
T d1db3a_         242 QE--QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV--DPRYFRPAEVE  317 (357)
T ss_dssp             SS--SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEE--CGGGCCCCC-C
T ss_pred             CC--CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEee--ccccCCCcccc
Confidence            75  457999999999999999999999999654443322210000000 0000000  00000000  0000   0112


Q ss_pred             cccccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          348 VFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       348 ~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      .+..|+++++++|||+|+  ++|+|+|+++++++.+..+
T Consensus       318 ~~~~d~skakk~LGw~P~--~sl~egI~~~I~~~l~~~k  354 (357)
T d1db3a_         318 TLLGDPTKAHEKLGWKPE--ITLREMVSEMVANDLEAAK  354 (357)
T ss_dssp             CCCBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHCCCcC--CCHHHHHHHHHHHHHHHHh
Confidence            234588999999999998  8999999999998765543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.1e-38  Score=303.31  Aligned_cols=284  Identities=17%  Similarity=0.190  Sum_probs=213.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC------ccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------ADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~------~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |||||||||||||++|+++|+++||+|++..++....      .......+++++++|++|.+.+.++++  ++|+||||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5899999999999999999999999865554432211      111223478999999999999999887  58999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcCC---------cEEEEecccCCC-----------------------
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGI---------QKYVFYSIHNCD-----------------------  196 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v---------~~~V~~Ss~~~~-----------------------  196 (399)
                      |+..       .+..+.++|+.|+.+++++|++.++         ++||++||..++                       
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            9832       3455678999999999999988753         499999997653                       


Q ss_pred             CCCCCcHHHHHHHHHHHHH----hCCCCEEEEecCcccccc------cccchhhhcccccc--ccCCCCcceeceeHHHH
Q 015872          197 KHPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLCGFMQGL------IGQYAVPILEEKSV--WGTDALTRIAYMDTQDI  264 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dv  264 (399)
                      ..|.++|+.+|..+|.++.    +.+++++++||+++||+.      +..++..+..++++  ++. +++.++|+|++|+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~-g~~~r~~i~v~D~  239 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK-GDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT-SCCEEEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCC-CCeEEeCEEHHHH
Confidence            2245679999999999884    479999999999999743      33445556666644  443 4566699999999


Q ss_pred             HHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhc
Q 015872          265 ARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLT  344 (399)
Q Consensus       265 a~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (399)
                      |+++..+++++.. +++|||++++.+++.|+++.+.+.++...+........             .....      ....
T Consensus       240 a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~------~~~~  299 (361)
T d1kewa_         240 ARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ-------------ITYVA------DRPG  299 (361)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGG-------------EEEEC------CCTT
T ss_pred             HHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhcccccccccCcccc-------------eeecC------CCCC
Confidence            9999999998754 67999999999999999999998876443221110000             00000      0001


Q ss_pred             cCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhh
Q 015872          345 SDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKA  390 (399)
Q Consensus       345 ~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~  390 (399)
                      ....+..|.++++++|||+|+  ++++|+|+++++||+++.++++.
T Consensus       300 ~~~~~~~d~~k~~~~lgw~P~--~~l~e~i~~ti~w~~~n~~~~~~  343 (361)
T d1kewa_         300 HDRRYAIDAGKISRELGWKPL--ETFESGIRKTVEWYLANTQWVNN  343 (361)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCS--CCHHHHHHHHHHHHHHCHHHHHH
T ss_pred             CCceeeeCHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHhHHHHHH
Confidence            223445788999999999998  89999999999999888666554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-39  Score=303.41  Aligned_cols=287  Identities=15%  Similarity=0.183  Sum_probs=210.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHH-HhcCCCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA-TLVGVHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~-~~~~~d~Vi~~a~~~~-  160 (399)
                      |||||||||||||++|+++|+++| ++|+++++............+++++++|+++.+.+.+ +++++|+|||+|+... 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            589999999999999999999999 5899999875555555556789999999998877655 6678999999998432 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--------------------CCCCCcHHHHHHHHHHHH
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------------KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--------------------~~~~~~y~~~K~~~E~~l  214 (399)
                            +.....+|+.|+.+++++|.+.++ ++++.||..++                    ..|...|+.+|..+|+++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                  234567999999999999999998 55667765431                    123356999999999988


Q ss_pred             H----hCCCCEEEEecCcccccc--------------cccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          215 Q----DSGLPHVIIRLCGFMQGL--------------IGQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       215 ~----~~g~~~~ilRp~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .    +.|++++++|++.+++..              ...++.+++.+..+. .+++++.++|+|++|+|+++..+++++
T Consensus       160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~  239 (342)
T d2blla1         160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA  239 (342)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence            4    468999999999998632              122334455565433 233466669999999999999999884


Q ss_pred             --ccCCcEEEEcCCCC-CCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcccccc
Q 015872          276 --KINGRTLTFSGPRA-WTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVP  352 (399)
Q Consensus       276 --~~~g~~~~l~~~~~-~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (399)
                        ...|++||+++++. +|++|+++.+.+.+|.......+|......          .......+.  ...........|
T Consensus       240 ~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~d  307 (342)
T d2blla1         240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFR----------VVESSSYYG--KGYQDVEHRKPS  307 (342)
T ss_dssp             GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEE----------EC--------------CCCCCBC
T ss_pred             cccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccc----------eeccccccc--cccccccccccC
Confidence              34578999987654 799999999999999876665554321000          000000000  000001112257


Q ss_pred             ccccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          353 MSETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       353 ~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      +++++++|||+|+  ++++|+|+++++||+++.
T Consensus       308 ~~k~~~~lgw~P~--~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         308 IRNAHRCLDWEPK--IDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             CHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHCCCcC--CCHHHHHHHHHHHHHhCc
Confidence            8999999999998  899999999999997654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=4.1e-38  Score=297.90  Aligned_cols=280  Identities=16%  Similarity=0.220  Sum_probs=216.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC------ccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~------~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      +|+|||||||||||++|+++|+++||+|.++.++....      ...+...+++++.+|++|.+.+..++.++|.|+|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a   81 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence            68999999999999999999999999877776643211      122334579999999999999999999999999999


Q ss_pred             CC-------CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------------------CCCCCcHH
Q 015872          157 TG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------------------KHPEVPLM  204 (399)
Q Consensus       157 ~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------------------~~~~~~y~  204 (399)
                      +.       .++..+.++|+.|+.++++++++.+. ++|++||..++                         ..|.++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            83       23456678999999999999999996 78888876543                         12457799


Q ss_pred             HHHHHHHHHHH----hCCCCEEEEecCccccccc------ccchhhhccccc--cccCCCCcceeceeHHHHHHHHHHHH
Q 015872          205 EIKYCTEQFLQ----DSGLPHVIIRLCGFMQGLI------GQYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       205 ~~K~~~E~~l~----~~g~~~~ilRp~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      .+|..+|.+++    +.+++++++||+.+||+..      ..++.....+..  +++. +...++|+|++|+|++++.++
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~-g~~~r~~i~v~D~a~a~~~~~  239 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGE-GKNVRDWIHTNDHSTGVWAIL  239 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETT-SCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCC-CCccccccchhhHHHHHHHHH
Confidence            99999998874    4789999999999998421      122333334442  3444 455669999999999999998


Q ss_pred             hCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCC-eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccc
Q 015872          273 RNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDAN-VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSV  351 (399)
Q Consensus       273 ~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (399)
                      +++. .+..|++++++..++.++++.+.+.+|.+.. +...+..              +.             ....+.+
T Consensus       240 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------~~-------------~~~~~~~  291 (346)
T d1oc2a_         240 TKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR--------------AG-------------HDLRYAI  291 (346)
T ss_dssp             HHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC--------------TT-------------CCCBCCB
T ss_pred             hhcc-cCccccccccccccchHHHHHHHHHhCCCCcceEECCCC--------------CC-------------CCceeee
Confidence            8776 4679999999999999999999999997643 3333221              00             1223446


Q ss_pred             cccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHhhhcc
Q 015872          352 PMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSK  393 (399)
Q Consensus       352 ~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~~~~~  393 (399)
                      |+++++++|||+|+ +++|+|+|+++++||+++.+.++++++
T Consensus       292 d~~k~~~~LGw~P~-~t~l~e~i~~ti~w~~~n~~~~~~~k~  332 (346)
T d1oc2a_         292 DASKLRDELGWTPQ-FTDFSEGLEETIQWYTDNQDWWKAEKE  332 (346)
T ss_dssp             CCHHHHHHHCCCCS-CCCHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CHHHHHHHHCCCCc-CCCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            88999999999996 236999999999999998776666543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.6e-37  Score=293.17  Aligned_cols=280  Identities=13%  Similarity=0.118  Sum_probs=214.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----------ccccCCcEEEEccCCCCCcHHHHhcCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRDWGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----------~l~~~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      +++|+|||||||||||++|+++|+++||+|++++|.......          .....+++++.+|+.|...+.....+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            456899999999999999999999999999999984332211          1112368999999999998888888999


Q ss_pred             EEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------CCCCCcHHHHHHHH
Q 015872          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCT  210 (399)
Q Consensus       151 ~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~  210 (399)
                      .|+|+++..       ++....++|+.|+.+++++|.++++++|||+||..++             ..|.++|+.+|..+
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            999998732       2244567999999999999999999999999998653             33567899999999


Q ss_pred             HHHHH----hCCCCEEEEecCcccccc----------cccchhhhcccccc--ccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          211 EQFLQ----DSGLPHVIIRLCGFMQGL----------IGQYAVPILEEKSV--WGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       211 E~~l~----~~g~~~~ilRp~~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      |++++    +.+++++++||+++||..          +..+...++.+.++  +++ +.+.++|+|++|+|.++..++..
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~-g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGD-GETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS-SCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCC-CCEEEEEEEEeccchhhhhhhhc
Confidence            98874    468999999999999643          22233455666544  344 45556999999999999999987


Q ss_pred             Cc-cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccc
Q 015872          275 EK-INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPM  353 (399)
Q Consensus       275 ~~-~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (399)
                      +. ..+++||+++++.+|+.|+++.+.+.+|.+.........              ..+        ...........|+
T Consensus       253 ~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~--------------~~~--------~~~~~~~~~~~d~  310 (341)
T d1sb8a_         253 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV--------------YRD--------FREGDVRHSLADI  310 (341)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE--------------EEC--------CCTTCCSBCCBCC
T ss_pred             cccccceeeeecccccchHHHHHHHHHHHhcccccccccccc--------------ccC--------CCCCCcCeeeeCH
Confidence            53 457899999999999999999999998855321111100              000        0000111223578


Q ss_pred             cccccccCCCCCccccHHHHHHHHHHHHHHhh
Q 015872          354 SETFDLLGVDAKDIITLEKYLQDYFTNILKKL  385 (399)
Q Consensus       354 ~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~  385 (399)
                      +++++.|||+|+  ++++|+|+++++||++.+
T Consensus       311 ~k~~~~LGw~p~--~sl~~gi~~ti~wy~~~~  340 (341)
T d1sb8a_         311 SKAAKLLGYAPK--YDVSAGVALAMPWYIMFL  340 (341)
T ss_dssp             HHHHHHTCCCCC--CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCcC--CCHHHHHHHHHHHHHHhc
Confidence            899999999998  899999999999998754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-37  Score=288.46  Aligned_cols=276  Identities=18%  Similarity=0.243  Sum_probs=211.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC------Cc------cccccCCcEEEEccCCCCCcHHHHhcC--
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------PA------DFLRDWGATVVNADLSKPETIPATLVG--  148 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~------~~------~~l~~~~v~~~~~Dl~d~~~l~~~~~~--  148 (399)
                      .|||||||||||||++|+++|+++||+|++++|....      ..      ..+...+++++++|++|.+.+.+++.+  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            4799999999999999999999999999999863211      11      112335789999999999999988864  


Q ss_pred             CCEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC--------------CCCCCcHHHHH
Q 015872          149 VHTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIK  207 (399)
Q Consensus       149 ~d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~--------------~~~~~~y~~~K  207 (399)
                      +++|+|+|+..       .+....++|+.|+.++++++++.++++||++||..++              ..+.++|+.+|
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence            66899999832       2345568899999999999999999999999987542              33567899999


Q ss_pred             HHHHHHHHh-----CCCCEEEEecCccccccccc------------ch----hhhcc-cc--ccccC-----CCCcceec
Q 015872          208 YCTEQFLQD-----SGLPHVIIRLCGFMQGLIGQ------------YA----VPILE-EK--SVWGT-----DALTRIAY  258 (399)
Q Consensus       208 ~~~E~~l~~-----~g~~~~ilRp~~~~~~~~~~------------~~----~~~~~-~~--~~~~~-----~~~~~~~~  258 (399)
                      ...|+.+.+     .+++++++||+.+||.....            ++    ..+.. +.  .+++.     .+.+.++|
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdf  241 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY  241 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeE
Confidence            999987743     58999999999999642211            11    11111 11  12221     22334599


Q ss_pred             eeHHHHHHHHHHHHhC--CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhh
Q 015872          259 MDTQDIARLTFVALRN--EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADR  336 (399)
Q Consensus       259 v~v~Dva~~i~~~l~~--~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (399)
                      +|++|+|.++..++..  ....+++||+++++.+++.|+++.+.+.+|.+.++...+..              +.+    
T Consensus       242 i~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~--------------~~e----  303 (346)
T d1ek6a_         242 IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR--------------EGD----  303 (346)
T ss_dssp             EEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC--------------TTC----
T ss_pred             EEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCC--------------CCC----
Confidence            9999999999888655  33356799999999999999999999999998888776542              111    


Q ss_pred             hhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          337 LAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                               ...+..|+++++++|||+|+  ++++|+++++++|++++..+
T Consensus       304 ---------~~~~~~d~~k~~~~lgw~p~--~slee~I~~~i~w~~~n~~~  343 (346)
T d1ek6a_         304 ---------VAACYANPSLAQEELGWTAA--LGLDRMCEDLWRWQKQNPSG  343 (346)
T ss_dssp             ---------CSEECBCCHHHHHTTCCCCC--CCHHHHHHHHHHHHHHCTTC
T ss_pred             ---------CCEeeECHHHHHHHHCCCcC--CCHHHHHHHHHHHHHhCHhh
Confidence                     12233678999999999998  89999999999999987654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.9e-37  Score=289.96  Aligned_cols=276  Identities=18%  Similarity=0.225  Sum_probs=207.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc------cccccCCcEEEEccCCCCCcHHHHhc--CCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~------~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~  155 (399)
                      |.|||||||||||++|+++|+++||+|++++|......      ..+...+++++++|++|.+.+..+++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            56999999999999999999999999999987433321      22234579999999999999999887  79999999


Q ss_pred             CCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-----------------CCCCCcHHHHHHHHH
Q 015872          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-----------------KHPEVPLMEIKYCTE  211 (399)
Q Consensus       156 a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-----------------~~~~~~y~~~K~~~E  211 (399)
                      |+..       .+..+..+|+.++.+++++|++.+++|||++||..++                 ..|.++|+.+|..+|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            9832       2345567999999999999999999999999997653                 124577999999999


Q ss_pred             HHHHh------CCCCEEEEecCcccccccc------------c---chhhhc--cccc--cccCCC-----CcceeceeH
Q 015872          212 QFLQD------SGLPHVIIRLCGFMQGLIG------------Q---YAVPIL--EEKS--VWGTDA-----LTRIAYMDT  261 (399)
Q Consensus       212 ~~l~~------~g~~~~ilRp~~~~~~~~~------------~---~~~~~~--~~~~--~~~~~~-----~~~~~~v~v  261 (399)
                      +++++      .+++++++||+++|+....            .   ++....  .+.+  +++.+.     ....+++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~  241 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  241 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence            98743      5789999999998853211            0   111111  1222  333321     223489999


Q ss_pred             HHHHHHHHHHHhC------CccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhh
Q 015872          262 QDIARLTFVALRN------EKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVAD  335 (399)
Q Consensus       262 ~Dva~~i~~~l~~------~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (399)
                      .|.+.+++.+++.      ....+++||+++++.+|+.|+++.+.+.+|.+.++...+...              .+   
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--------------~~---  304 (347)
T d1z45a2         242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRA--------------GD---  304 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------------
T ss_pred             ecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCC--------------CC---
Confidence            9999999888864      222467999999999999999999999999987765543221              11   


Q ss_pred             hhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHH
Q 015872          336 RLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDL  388 (399)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~  388 (399)
                                ...+..|.++++++|||+|+  ++++|+|+++++|++++++++
T Consensus       305 ----------~~~~~~d~sk~~~~lGw~p~--~~lee~i~~ti~w~~~np~~~  345 (347)
T d1z45a2         305 ----------VLNLTAKPDRAKRELKWQTE--LQVEDSCKDLWKWTTENPFGY  345 (347)
T ss_dssp             ----------CCCCCBCCHHHHHHTCCCCC--CCHHHHHHHHHHHHHHCTTCS
T ss_pred             ----------CCEeeECHHHHHHHHCCCCC--CCHHHHHHHHHHHHHhChhcC
Confidence                      11233678999999999998  899999999999999886653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=9.7e-36  Score=278.27  Aligned_cols=275  Identities=16%  Similarity=0.151  Sum_probs=208.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC-cccc----ccCCcEEEEccCCCCCcHHHHhc--CCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFL----RDWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~-~~~l----~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a  156 (399)
                      |+|||||||||||++|+++|+++||+|++++|..... ...+    ...+++++++|++|.+.+.+.+.  ..++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            6899999999999999999999999999999975432 1112    12368999999999999988776  467888888


Q ss_pred             CC-------CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCC-------------CCCCCcHHHHHHHHHHHHH
Q 015872          157 TG-------RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       157 ~~-------~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~~l~  215 (399)
                      +.       .+...+...|+.|+.+++++|++.+++ +|++.||..++             ..|.++|+.+|..+|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            72       233455678999999999999999965 78888876442             2356889999999999874


Q ss_pred             ----hCCCCEEEEecCcccccccc---------cchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCc
Q 015872          216 ----DSGLPHVIIRLCGFMQGLIG---------QYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGR  280 (399)
Q Consensus       216 ----~~g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~  280 (399)
                          +.+++++++||+++||+...         .++.++..+.  .+..+++++.++|+|++|+|++++.+++++.  ++
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~  238 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD  238 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred             HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence                47899999999999975421         1122222222  2333445666699999999999999999874  46


Q ss_pred             EEEEcCCCCCCHHHHHHHHHHHhCCCCCe-eecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccc
Q 015872          281 TLTFSGPRAWTTQEVITLCERLAGQDANV-TMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDL  359 (399)
Q Consensus       281 ~~~l~~~~~~s~~e~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      .||+++++..|+.++++.+.+..|.+.+. ..+.+...           .+.             ....+..|+++++++
T Consensus       239 ~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------rp~-------------~~~~~~~d~~k~~k~  294 (321)
T d1rpna_         239 DYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-----------RPA-------------EVDVLLGNPAKAQRV  294 (321)
T ss_dssp             CEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-----------CSS-------------CCCBCCBCTHHHHHH
T ss_pred             CceecccccceehhhhHHHHHHhCCCccceeecCCCCC-----------CCC-------------ccCCccCCHHHHHHH
Confidence            89999999999999999999999976532 22222100           000             122344678999999


Q ss_pred             cCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          360 LGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       360 LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      |||+|+  ++++|+|+++++|+.+..+
T Consensus       295 lG~~P~--~~l~e~i~~tv~~~l~~~~  319 (321)
T d1rpna_         295 LGWKPR--TSLDELIRMMVEADLRRVS  319 (321)
T ss_dssp             HCCCCC--SCHHHHHHHHHHHHHHHHH
T ss_pred             HCCCcC--CCHHHHHHHHHHHHHHHhc
Confidence            999998  7999999999999887543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=3e-35  Score=281.88  Aligned_cols=275  Identities=18%  Similarity=0.214  Sum_probs=206.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCC----------------------CccccccCCcEEEEccCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPA----------------------PADFLRDWGATVVNADLSKP  139 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~----------------------~~~~l~~~~v~~~~~Dl~d~  139 (399)
                      .|||||||||||||++|+++|++ .||+|+++++-...                      .........+.++++|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            36899999999999999999996 68999999851110                      00111123588999999999


Q ss_pred             CcHHHHhc---CCCEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------
Q 015872          140 ETIPATLV---GVHTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------  196 (399)
Q Consensus       140 ~~l~~~~~---~~d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------  196 (399)
                      +.+.++++   ++|+|||+|+..       ......++|+.++.++++++++.++++++++|+..++             
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99988885   679999999843       2334557899999999999999999999998876431             


Q ss_pred             -------CCCCCcHHHHHHHHHHHHHh----CCCCEEEEecCccccccccc---------------chhhhc--------
Q 015872          197 -------KHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLCGFMQGLIGQ---------------YAVPIL--------  242 (399)
Q Consensus       197 -------~~~~~~y~~~K~~~E~~l~~----~g~~~~ilRp~~~~~~~~~~---------------~~~~~~--------  242 (399)
                             ..|.++|+.+|...|+++++    .|++++++||+++||.....               .+..++        
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence                   23568899999999998853    79999999999999743221               011111        


Q ss_pred             --------ccc--ccccC-----CCCcceeceeHHHHHHHHHHHHhCC--------ccCCcEEEEcCCCCCCHHHHHHHH
Q 015872          243 --------EEK--SVWGT-----DALTRIAYMDTQDIARLTFVALRNE--------KINGRTLTFSGPRAWTTQEVITLC  299 (399)
Q Consensus       243 --------~~~--~~~~~-----~~~~~~~~v~v~Dva~~i~~~l~~~--------~~~g~~~~l~~~~~~s~~e~~~~~  299 (399)
                              .+.  .+++.     ++.+.++|+|++|+|+++..+++..        ...+++|||++++.+|+.|+++.+
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i  321 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA  321 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHH
Confidence                    111  12221     2344459999999999999998741        224579999999999999999999


Q ss_pred             HHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHH-H
Q 015872          300 ERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDY-F  378 (399)
Q Consensus       300 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~-~  378 (399)
                      .+..|.+.++...+..              +.+             ...+..|+++++++|||+|+  ++++|+|+++ +
T Consensus       322 ~~~~~~~~~~~~~~~~--------------~~d-------------~~~~~~d~~k~~k~LGw~P~--~~l~e~i~~t~~  372 (383)
T d1gy8a_         322 RKTTGHPIPVRECGRR--------------EGD-------------PAYLVAASDKAREVLGWKPK--YDTLEAIMETSW  372 (383)
T ss_dssp             HHHHCCCCCEEEECCC--------------TTC-------------CSEECBCCHHHHHHTCCCCS--CCSHHHHHHHHH
T ss_pred             HHHhCCCCceEECCCC--------------CCC-------------cCEeeeCHHHHHHHHCCccC--CCHHHHHHHHHH
Confidence            9999998887765432              111             11233578999999999998  8999999886 6


Q ss_pred             HHHHHhhH
Q 015872          379 TNILKKLK  386 (399)
Q Consensus       379 ~~~~~~~~  386 (399)
                      .|+++++.
T Consensus       373 ~w~~~~~~  380 (383)
T d1gy8a_         373 KFQRTHPN  380 (383)
T ss_dssp             HHHHTCTT
T ss_pred             HHHHhCcc
Confidence            88876643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-35  Score=285.85  Aligned_cols=278  Identities=14%  Similarity=0.177  Sum_probs=201.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC----------CCC------Cc------cccccCCcEEEEccCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP----------RPA------PA------DFLRDWGATVVNADLSKPE  140 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~----------~~~------~~------~~l~~~~v~~~~~Dl~d~~  140 (399)
                      +|||||||||||||++|+++|+++||+|++++.-          ...      ..      ..+...+++++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            3789999999999999999999999999999721          000      00      1112347899999999999


Q ss_pred             cHHHHhc--CCCEEEECCCCCC----------CCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCC-----------
Q 015872          141 TIPATLV--GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD-----------  196 (399)
Q Consensus       141 ~l~~~~~--~~d~Vi~~a~~~~----------~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~-----------  196 (399)
                      .+.++++  ++|+|||+|+...          +..+..+|+.|+.+++++|++.+++ ++++.||..++           
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            9999997  5799999998321          1134578999999999999999876 57777765432           


Q ss_pred             ---------------CCCCCcHHHHHHHHHHHH----HhCCCCEEEEecCccccccc-----------------------
Q 015872          197 ---------------KHPEVPLMEIKYCTEQFL----QDSGLPHVIIRLCGFMQGLI-----------------------  234 (399)
Q Consensus       197 ---------------~~~~~~y~~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~-----------------------  234 (399)
                                     ..|.++|+.+|..+|.++    ++.+++++++||+.+||...                       
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence                           245568999999999887    46799999999999997432                       


Q ss_pred             ccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEE-cCCCCCCHHHHHHHHHHHh---CCCCC
Q 015872          235 GQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF-SGPRAWTTQEVITLCERLA---GQDAN  308 (399)
Q Consensus       235 ~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l-~~~~~~s~~e~~~~~~~~~---g~~~~  308 (399)
                      ..+......+.  .+++.+ .+.++|+|++|+++++..+++++...+..+.+ .+++.+|+.|+++++.+..   |.+++
T Consensus       241 ~~~~~~~~~~~~~~i~g~~-~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~  319 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKG-GQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVK  319 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTS-CCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred             hhhhHHhhcCCeeEEeeec-ccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcc
Confidence            11222333444  345554 44459999999999999999987665554333 3446799999999998875   44445


Q ss_pred             eeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHH
Q 015872          309 VTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDL  388 (399)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~  388 (399)
                      ....+.+.                         .-.....+..|.+++++ |||+|+  +++++++++.++|+.+.....
T Consensus       320 ~~~~~~~~-------------------------~~~~~~~~~~d~~k~~~-LGw~P~--~~~~~~i~~~~~~~~~~k~~~  371 (393)
T d1i24a_         320 KMTVPNPR-------------------------VEAEEHYYNAKHTKLME-LGLEPH--YLSDSLLDSLLNFAVQFKDRV  371 (393)
T ss_dssp             EEEECCSS-------------------------CSCSSCCCCBCCCHHHH-TTCCCC--CCCHHHHHHHHHHHHHTGGGC
T ss_pred             eeeccCCC-------------------------CCCCccEecCCHHHHHH-cCCccc--cCHHHHHHHHHHHHHHHHHhh
Confidence            44433210                         00112234467788864 999999  899999999999987665443


Q ss_pred             h
Q 015872          389 K  389 (399)
Q Consensus       389 ~  389 (399)
                      +
T Consensus       372 ~  372 (393)
T d1i24a_         372 D  372 (393)
T ss_dssp             C
T ss_pred             h
Confidence            3

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-35  Score=275.75  Aligned_cols=292  Identities=14%  Similarity=0.125  Sum_probs=207.9

Q ss_pred             CeE-EEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC----ccc-------cccCCcEEEEccCCCCCcHHHHhc--CC
Q 015872           84 TSI-LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADF-------LRDWGATVVNADLSKPETIPATLV--GV  149 (399)
Q Consensus        84 ~~v-lVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~----~~~-------l~~~~v~~~~~Dl~d~~~l~~~~~--~~  149 (399)
                      ||| ||||||||||++|+++|+++||+|++++|.....    .+.       ....+++++++|++|.+.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            568 9999999999999999999999999999964321    111       112368999999999999999986  67


Q ss_pred             CEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcCCc---EEEEecccCCCC-------------CCCCcHHHH
Q 015872          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNCDK-------------HPEVPLMEI  206 (399)
Q Consensus       150 d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~---~~V~~Ss~~~~~-------------~~~~~y~~~  206 (399)
                      ++|+|+++..       +...+.++|+.||.+++++|+++++.   +|||+||..++.             .|.++|+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            8999998743       23444579999999999999998763   899999987642             345789999


Q ss_pred             HHHHHHHHH----hCCCCEEEEecCccccccccc------c----hhhhccccc-cccCCCCcceeceeHHHHHHHHHHH
Q 015872          207 KYCTEQFLQ----DSGLPHVIIRLCGFMQGLIGQ------Y----AVPILEEKS-VWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       207 K~~~E~~l~----~~g~~~~ilRp~~~~~~~~~~------~----~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      |.++|+++.    +.+++++++||+++||+....      +    ......... ...+++...++|+|++|+++++..+
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~  240 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  240 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence            999999874    468999999999999853211      1    111222222 2223345566999999999999999


Q ss_pred             HhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhh-hhhccCcccc
Q 015872          272 LRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFS-EVLTSDTVFS  350 (399)
Q Consensus       272 l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  350 (399)
                      +++...  +.|++......++.+..+.+...+|........+......       .............. ..-.....+.
T Consensus       241 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~rp~~~~~~~  311 (347)
T d1t2aa_         241 LQNDEP--EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGR-------CKETGKVHVTVDLKYYRPTEVDFLQ  311 (347)
T ss_dssp             HHSSSC--CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEE-------ETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred             hhcCCC--ccceeccccccccchhhhhhhhhhcceeeecccchhhhhh-------hhhcCCceeeecccCCCCCCcCEee
Confidence            998653  5788888888999999999999999875544332211000       00000000000000 0001122345


Q ss_pred             ccccccccccCCCCCccccHHHHHHHHHHHHHHhhH
Q 015872          351 VPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK  386 (399)
Q Consensus       351 ~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~  386 (399)
                      .|+++++++|||+|+  ++|+|++++++++..+.++
T Consensus       312 ~d~skak~~Lgw~P~--~sl~e~i~~~I~~~~~~~k  345 (347)
T d1t2aa_         312 GDCTKAKQKLNWKPR--VAFDELVREMVHADVELMR  345 (347)
T ss_dssp             BCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcC--CCHHHHHHHHHHHHHHHHh
Confidence            688999999999998  8999999999988766554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-34  Score=270.32  Aligned_cols=279  Identities=16%  Similarity=0.149  Sum_probs=205.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC----Ccc-------ccccCCcEEEEccCCCCCcHHHHhc--CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA----PAD-------FLRDWGATVVNADLSKPETIPATLV--GV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~----~~~-------~l~~~~v~~~~~Dl~d~~~l~~~~~--~~  149 (399)
                      +|+|||||||||||++|++.|+++||+|++++|....    ...       ......++++.+|+++.+.+...++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4789999999999999999999999999999996431    111       1122357899999999999988886  68


Q ss_pred             CEEEECCCCC-------CCCcchhccHHHHHHHHHHHHHcC-----CcEEEEecccCC------------CCCCCCcHHH
Q 015872          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNC------------DKHPEVPLME  205 (399)
Q Consensus       150 d~Vi~~a~~~-------~~~~~~~~n~~~~~~l~~aa~~~~-----v~~~V~~Ss~~~------------~~~~~~~y~~  205 (399)
                      |+|||+|+..       .+......|+.++.++++++++.+     ..++++.||...            +..|.++|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            9999999843       233455789999999999997653     346777777643            2346788999


Q ss_pred             HHHHHHHHH----HhCCCCEEEEecCccccccccc-c--------hhhhcccc--ccccCCCCcceeceeHHHHHHHHHH
Q 015872          206 IKYCTEQFL----QDSGLPHVIIRLCGFMQGLIGQ-Y--------AVPILEEK--SVWGTDALTRIAYMDTQDIARLTFV  270 (399)
Q Consensus       206 ~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~~~-~--------~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~  270 (399)
                      +|..+|+++    +..+++++++||+++||+.... +        ......+.  .++.+++.+.++++|++|+|+++..
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~  240 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL  240 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHH
Confidence            999999876    4579999999999999854221 1        11111121  3333345666699999999999999


Q ss_pred             HHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCee-ecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccc
Q 015872          271 ALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVT-MVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVF  349 (399)
Q Consensus       271 ~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (399)
                      +++++..  ..+++..+...+..++++.+.+.+|...+.. .+.....           .+             .....+
T Consensus       241 ~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------r~-------------~~~~~~  294 (339)
T d1n7ha_         241 MLQQEKP--DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-----------RP-------------AEVDNL  294 (339)
T ss_dssp             HHTSSSC--CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS-----------CS-------------SCCCBC
T ss_pred             HHhcCCC--CccccccccccccchhhhhhhhhhhcccCceeeeccCCC-----------CC-------------CCCCee
Confidence            9998754  4566667778999999999999999764321 1111100           00             012234


Q ss_pred             cccccccccccCCCCCccccHHHHHHHHHHHHHHhhHHHh
Q 015872          350 SVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLK  389 (399)
Q Consensus       350 ~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~~~  389 (399)
                      ..|.++++++|||+|+  ++++|+|+++++|+++..+.-|
T Consensus       295 ~~d~~Kak~~LGw~P~--~~le~gi~~ti~~~~~~~~~~~  332 (339)
T d1n7ha_         295 QGDASKAKEVLGWKPQ--VGFEKLVKMMVDEDLELAKREK  332 (339)
T ss_dssp             CBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eECHHHHHHHHCCCcC--CCHHHHHHHHHHHHHHHHhhhh
Confidence            4688999999999998  8999999999999988765544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-34  Score=266.68  Aligned_cols=256  Identities=13%  Similarity=0.133  Sum_probs=197.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR-  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~-  159 (399)
                      +|||||||||||||++|+++|+++||.|+++++..               +.|+.|.+.+.++++  .+|.|+|+|+.. 
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------hccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            57999999999999999999999999998776531               268888888888876  589999999732 


Q ss_pred             -------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC------------------CCCcHHHHHHHHHHHH
Q 015872          160 -------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------------PEVPLMEIKYCTEQFL  214 (399)
Q Consensus       160 -------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~------------------~~~~y~~~K~~~E~~l  214 (399)
                             +...+.++|+.||.+++++|++++++||||+||..++..                  +.++|+.+|..+|+++
T Consensus        67 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          67 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence                   234456789999999999999999999999999876431                  1236999999999987


Q ss_pred             H----hCCCCEEEEecCccccccccc----------c-----hhhhccccc--cccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          215 Q----DSGLPHVIIRLCGFMQGLIGQ----------Y-----AVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       215 ~----~~g~~~~ilRp~~~~~~~~~~----------~-----~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      +    +.|++++++||+++||.....          .     ......+..  +++.+ ...++++|++|++.++..+++
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG-TPMREFLHVDDMAAASIHVME  225 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS-CCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCC-ceEEEEEEeehhHHHHHHhhh
Confidence            4    569999999999999742210          0     111122222  23333 445699999999999999997


Q ss_pred             CCc--------cCCcEEEEcCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhcc
Q 015872          274 NEK--------INGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTS  345 (399)
Q Consensus       274 ~~~--------~~g~~~~l~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (399)
                      +..        .....++++.+...++.++++.+.+.+|.+..+...+..              +.             .
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~--------------~~-------------~  278 (315)
T d1e6ua_         226 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK--------------PD-------------G  278 (315)
T ss_dssp             SCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS--------------CC-------------C
T ss_pred             hccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCC--------------CC-------------C
Confidence            642        234689999998999999999999999998877664421              01             1


Q ss_pred             CccccccccccccccCCCCCccccHHHHHHHHHHHHHHh
Q 015872          346 DTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKK  384 (399)
Q Consensus       346 ~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~  384 (399)
                      ...+..|+++++ +|||+|+  ++|+|+|+++++||+++
T Consensus       279 ~~~~~~d~sk~k-~Lg~~p~--~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         279 TPRKLLDVTRLH-QLGWYHE--ISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             CSBCCBCCHHHH-HTTCCCC--CCHHHHHHHHHHHHHHT
T ss_pred             CceeccCHHHHH-HcCCCCC--CCHHHHHHHHHHHHHHc
Confidence            112235778886 5999998  89999999999999865

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.6e-34  Score=271.28  Aligned_cols=269  Identities=19%  Similarity=0.268  Sum_probs=204.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-c---cc-ccCCcEEEEccCCCCCcHHHHhcC--CCEEEECCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-D---FL-RDWGATVVNADLSKPETIPATLVG--VHTVIDCAT  157 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~---~l-~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vi~~a~  157 (399)
                      ||||||||||||++|+++|+++||+|+++++-..... .   .+ ...+++++++|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            6999999999999999999999999999986322211 1   11 234799999999999999999975  699999998


Q ss_pred             CC-------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC-C-----------------------------CCCC
Q 015872          158 GR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-D-----------------------------KHPE  200 (399)
Q Consensus       158 ~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~-~-----------------------------~~~~  200 (399)
                      ..       ++..+.++|+.||.+|+++|.+.+++++|+.||.+. +                             ..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            43       234566799999999999999999987776666432 0                             1234


Q ss_pred             CcHHHHHHHHHHHH----HhCCCCEEEEecCccccccc---------ccchhhhc-----ccc--ccccCCCCcceecee
Q 015872          201 VPLMEIKYCTEQFL----QDSGLPHVIIRLCGFMQGLI---------GQYAVPIL-----EEK--SVWGTDALTRIAYMD  260 (399)
Q Consensus       201 ~~y~~~K~~~E~~l----~~~g~~~~ilRp~~~~~~~~---------~~~~~~~~-----~~~--~~~~~~~~~~~~~v~  260 (399)
                      +.|+.+|...|.++    +..+....++|+..+|++..         ..+...++     .+.  .+++++ ...++|+|
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~r~~~~  240 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG-KQVRDVLH  240 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS-CCEEECEE
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC-ceeEeeec
Confidence            66999999999876    45789999999988874322         11222222     122  334444 45569999


Q ss_pred             HHHHHHHHHHHHhCC-ccCCcEEEEcC--CCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhh
Q 015872          261 TQDIARLTFVALRNE-KINGRTLTFSG--PRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRL  337 (399)
Q Consensus       261 v~Dva~~i~~~l~~~-~~~g~~~~l~~--~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (399)
                      ++|++++++.++++. ...|++|++.+  +..+++.|+++.+.+..|.+.++..++..              +.      
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--------------~~------  300 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR--------------ES------  300 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC--------------SS------
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC--------------CC------
Confidence            999999999999874 34678999954  45689999999999999998888776532              01      


Q ss_pred             hhhhhhccCccccccccccccccCCCCCccccHHHHHHHHHHHHHH
Q 015872          338 AFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILK  383 (399)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~  383 (399)
                             ....+..|.++++++|||+|+  ++++|+|+++++|+++
T Consensus       301 -------~~~~~~~d~~k~~~~Lg~~p~--~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         301 -------DQRVFVADIKKITNAIDWSPK--VSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             -------CCSEECBCCHHHHHHHCCCCC--SCHHHHHHHHHHHHHH
T ss_pred             -------CcCeeeECHHHHHHHHCCCcC--CCHHHHHHHHHHHHHc
Confidence                   112234688999999999998  8999999999999974

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-32  Score=239.76  Aligned_cols=197  Identities=21%  Similarity=0.220  Sum_probs=166.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      |.+|||+||||||+||++++++|+++||+|++++|++.+.. .....+++++++|++|.+++.++++++|+|||++|...
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcc-cccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            56789999999999999999999999999999999855433 34456899999999999999999999999999999766


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCC------CcHHHHHHHHHHHHHhCCCCEEEEecCccccccc
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE------VPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~------~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~  234 (399)
                      .....+++..++.++++++++++++|||++||.+++..+.      ..|...|..+|+++++.+++|+++||+.++++..
T Consensus        80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_          80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCC
T ss_pred             chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceecCCCC
Confidence            6666678899999999999999999999999987654433      2588899999999999999999999999986532


Q ss_pred             ccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          235 GQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      .        +...+..++..+..+++++|+|++++.+++++.+.|+.+.+++
T Consensus       160 ~--------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         160 T--------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             C--------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             c--------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            2        1112222335556899999999999999999988899888876

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=7.9e-33  Score=262.01  Aligned_cols=277  Identities=13%  Similarity=0.102  Sum_probs=204.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----cCCcEEEEccCCCCCcHHHHhc--CCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a  156 (399)
                      .|||||||||||||++|++.|+++||+|++++|+..+....+.    ..+++++++|++|++.+.++++  .+|+|+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            5899999999999999999999999999999998665443322    2379999999999999998887  579999999


Q ss_pred             CCC-------CCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCC--------------CCCCCcHHHHHHHHHHHH
Q 015872          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD--------------KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       157 ~~~-------~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~--------------~~~~~~y~~~K~~~E~~l  214 (399)
                      +..       .+..+..+|+.|+.++++++++.+.. .+++.|+...+              ..|..+|+.+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            832       33556678999999999999998754 55555544321              235677999999998765


Q ss_pred             H-------------hCCCCEEEEecCccccccc---cc----chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          215 Q-------------DSGLPHVIIRLCGFMQGLI---GQ----YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       215 ~-------------~~g~~~~ilRp~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .             ..++.++++||+++||+.-   ..    +...+..+..+....+...++++|++|++.++..++.+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhh
Confidence            3             3578999999999997432   11    22233333344444456666999999999999999887


Q ss_pred             CccC----CcEEEE--cCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCcc
Q 015872          275 EKIN----GRTLTF--SGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTV  348 (399)
Q Consensus       275 ~~~~----g~~~~l--~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (399)
                      +...    +...+.  ...+.+++.++++.+.+..|.+.++......-             +.             ....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~-------------~~~~  301 (356)
T d1rkxa_         248 LYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH-------------PH-------------EAHY  301 (356)
T ss_dssp             HHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------CCCC
T ss_pred             hcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC-------------CC-------------CcCe
Confidence            4322    233333  34556899999999999999887765432210             01             1122


Q ss_pred             ccccccccccccCCCCCccccHHHHHHHHHHHHHHhhHH
Q 015872          349 FSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKD  387 (399)
Q Consensus       349 ~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~~~~~~~~  387 (399)
                      +..|.++++++|||+|+  ++|+|+|+++++||+..+..
T Consensus       302 ~~~d~skak~~LGw~P~--~~l~egi~~ti~wyk~~~~~  338 (356)
T d1rkxa_         302 LKLDCSKAKMQLGWHPR--WNLNTTLEYIVGWHKNWLSG  338 (356)
T ss_dssp             CCBCCHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHTT
T ss_pred             eeEcHHHHHHHHCCCcC--CCHHHHHHHHHHHHHHHHcC
Confidence            34678999999999998  89999999999999865443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.98  E-value=2.3e-32  Score=250.03  Aligned_cols=254  Identities=17%  Similarity=0.134  Sum_probs=198.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC-
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~-  160 (399)
                      |||||||||||||++|+++|.++||+|++++|+.                +|++|.+++.++++  ++|+|||+++... 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            6799999999999999999999999999999862                58999999999987  6899999998432 


Q ss_pred             ------CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       161 ------~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~-------------~~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                            +......|+.....+.+++...+. ++++.|+..+             ...+...|+.+|...|+++++.+.++
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~  144 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKY  144 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred             ccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCc
Confidence                  233345778888888888888776 6666666543             12345679999999999999999999


Q ss_pred             EEEecCcccccccc---cchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHH
Q 015872          222 VIIRLCGFMQGLIG---QYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITL  298 (399)
Q Consensus       222 ~ilRp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~  298 (399)
                      +++||+++||...+   .+...+..+..+...+ +..++++|++|+++++..++++...  ++||+++++.+|+.|+++.
T Consensus       145 ~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~~~~s~~e~~~~  221 (281)
T d1vl0a_         145 YIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH-DQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCKGICSWYDFAVE  221 (281)
T ss_dssp             EEEEECSEESSSSCHHHHHHHHHHHCSEEEEES-SCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCBSCEEHHHHHHH
T ss_pred             cccceeEEeCCCcccccchhhhhccCCceeecC-Cceeccchhhhhhhhhhhhhhhccc--CceeEeCCCccchHHHHHH
Confidence            99999999975432   2333344444443333 4666999999999999999988653  5999999999999999999


Q ss_pred             HHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccccHHHHHHHHH
Q 015872          299 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYF  378 (399)
Q Consensus       299 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~  378 (399)
                      +.+.+|.+.++.+++...          ++.   ..         .++.....|++|+++.|||+|.   +++|+|++++
T Consensus       222 i~~~~g~~~~i~~i~~~~----------~~~---~a---------~rp~~~~ld~~k~~~~~g~~~~---~~~~~l~~~l  276 (281)
T d1vl0a_         222 IFRLTGIDVKVTPCTTEE----------FPR---PA---------KRPKYSVLRNYMLELTTGDITR---EWKESLKEYI  276 (281)
T ss_dssp             HHHHHCCCCEEEEECSTT----------SCC---SS---------CCCSBCCBCCHHHHHTTCCCCC---BHHHHHHHHH
T ss_pred             HHHHhCCCceEEeccHHH----------cCC---cC---------CCccccccCHHHHHHHhCCCCC---CHHHHHHHHH
Confidence            999999999888876431          000   00         0111122578999999999988   8999999999


Q ss_pred             HHHH
Q 015872          379 TNIL  382 (399)
Q Consensus       379 ~~~~  382 (399)
                      ++++
T Consensus       277 ~~l~  280 (281)
T d1vl0a_         277 DLLQ  280 (281)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.98  E-value=2.2e-32  Score=257.81  Aligned_cols=268  Identities=17%  Similarity=0.194  Sum_probs=189.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-------ccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-------RDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-------~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      .|+|||||||||||++|+++|+++||+|++++|+..+.....       .......+.+|+.|.+.+.+++.++|+|+|+
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~   90 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI   90 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhh
Confidence            589999999999999999999999999999999743321110       1112456889999999999999999999999


Q ss_pred             CCCC----CCCcchhccHHHHHHHHHHHHHc-CCcEEEEecccCCCC---------------------------------
Q 015872          156 ATGR----PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK---------------------------------  197 (399)
Q Consensus       156 a~~~----~~~~~~~~n~~~~~~l~~aa~~~-~v~~~V~~Ss~~~~~---------------------------------  197 (399)
                      ++..    .+..+++.|+.|+.+++++|.+. ++++|||+||..+..                                 
T Consensus        91 a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  170 (342)
T d1y1pa1          91 ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ  170 (342)
T ss_dssp             CCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred             cccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCC
Confidence            9832    23345578999999999999987 699999999964310                                 


Q ss_pred             CCCCcHHHHHHHHHHHH----HhC--CCCEEEEecCcccccccc---------cchhhhccccccccCCCCcceeceeHH
Q 015872          198 HPEVPLMEIKYCTEQFL----QDS--GLPHVIIRLCGFMQGLIG---------QYAVPILEEKSVWGTDALTRIAYMDTQ  262 (399)
Q Consensus       198 ~~~~~y~~~K~~~E~~l----~~~--g~~~~ilRp~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~v~v~  262 (399)
                      .|..+|+.+|..+|+++    ++.  +++++++||+.++|+...         .++..+..+......+++...+|+|++
T Consensus       171 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~  250 (342)
T d1y1pa1         171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH
T ss_pred             CCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHH
Confidence            11235999999999855    343  577889999999875322         233344444422222234445899999


Q ss_pred             HHHHHHHHHHhCCccCCcEEEEcCCCCCCHHHHHHHHHHHhCC-CCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 015872          263 DIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQ-DANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSE  341 (399)
Q Consensus       263 Dva~~i~~~l~~~~~~g~~~~l~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
                      |+|++++.+++++...|+ |++++++.+|+.|+++++.+..+. +++. .++..              ...         
T Consensus       251 Dva~~~i~~l~~~~~~g~-~~~~~~~~~t~~eia~~i~k~~p~~~~~~-~~~~~--------------~~~---------  305 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIERR-RVYGTAGTFDWNTVLATFRKLYPSKTFPA-DFPDQ--------------GQD---------  305 (342)
T ss_dssp             HHHHHHHHHHHCTTCCSC-EEEECCEEECHHHHHHHHHHHCTTSCCCC-CCCCC--------------CCC---------
T ss_pred             HHHHHHHHhhcCccccce-EEEEcCCceEHHHHHHHHHHHcCCCcCCc-cCCcc--------------Ccc---------
Confidence            999999999999876555 457777889999999999998743 2211 11110              000         


Q ss_pred             hhccCccccccccccccccCCCCCccccHHHHHHHHHHH
Q 015872          342 VLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTN  380 (399)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~LG~~p~~~~~lee~l~~~~~~  380 (399)
                      ....+.   ....+..+.|||+|.  ++|||+++++++.
T Consensus       306 ~~~~~~---~~s~~~~k~lg~~~~--~~lee~i~d~I~s  339 (342)
T d1y1pa1         306 LSKFDT---APSLEILKSLGRPGW--RSIEESIKDLVGS  339 (342)
T ss_dssp             CCEECC---HHHHHHHHHTTCCSC--CCHHHHHHHHHCC
T ss_pred             cccccc---hHHHHHHHHcCCCCC--cCHHHHHHHHHHh
Confidence            000000   112344466999997  7999999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.97  E-value=1.6e-31  Score=247.57  Aligned_cols=231  Identities=19%  Similarity=0.269  Sum_probs=184.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-------cccccCCcEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-------DFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-------~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      ++||||||||||||++|+++|+++||+|++++|+.....       ..+...+++++++|+.|.+.+.+++.++++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            567999999999999999999999999999999754322       1233457999999999999999999999999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------CCCCCcHHHHHHHHHHHHHhCCCCEEEEecCc
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCG  228 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~  228 (399)
                      ++...    ...|..++.+++++|.+.+..++++.||.++.       ..+...|...|..++++.++.+++++++||+.
T Consensus        83 ~~~~~----~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~  158 (312)
T d1qyda_          83 LAGGV----LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNM  158 (312)
T ss_dssp             CCCSS----SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCE
T ss_pred             hhhcc----cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccce
Confidence            87432    23566788899999999988788888887653       23445688999999999999999999999999


Q ss_pred             ccccccccch---hh-hcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE-EEEcCCCCCCHHHHHHHHHHH
Q 015872          229 FMQGLIGQYA---VP-ILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT-LTFSGPRAWTTQEVITLCERL  302 (399)
Q Consensus       229 ~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~-~~l~~~~~~s~~e~~~~~~~~  302 (399)
                      +|+.....+.   .. ...+. .+....++..++|+|++|+|++++.++.++...++. |++++++.+|++|+++.++++
T Consensus       159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~  238 (312)
T d1qyda_         159 FAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL  238 (312)
T ss_dssp             EHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHH
T ss_pred             eecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHH
Confidence            9975443321   11 11222 222334567779999999999999999998776665 556666779999999999999


Q ss_pred             hCCCCCeeecCHHHH
Q 015872          303 AGQDANVTMVPVSVL  317 (399)
Q Consensus       303 ~g~~~~~~~~~~~~~  317 (399)
                      +|++.++..+|.+..
T Consensus       239 ~g~~~~~~~i~~~~~  253 (312)
T d1qyda_         239 SEQNLDKIYISSQDF  253 (312)
T ss_dssp             HTCCCEECCBCSHHH
T ss_pred             HCCCCeEEECCHHHH
Confidence            999999999987644

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.97  E-value=2.9e-31  Score=244.64  Aligned_cols=228  Identities=21%  Similarity=0.324  Sum_probs=184.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc--------ccccCCcEEEEccCCCCCcHHHHhcCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--------FLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~--------~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~  154 (399)
                      +|||||||||||||++++++|+++||+|++++|+......        .+...+++++.+|+.+.+.+.+.+++++.|+|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            5889999999999999999999999999999997554321        12345789999999999999999999999999


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC------CCcHHHHHHHHHHHHHhCCCCEEEEecCc
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP------EVPLMEIKYCTEQFLQDSGLPHVIIRLCG  228 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~------~~~y~~~K~~~E~~l~~~g~~~~ilRp~~  228 (399)
                      +++.        .+..++.+++++++.++++++++.|+.+.....      ...+...+...+.++++.+++++++||+.
T Consensus        83 ~~~~--------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~  154 (307)
T d1qyca_          83 TVGS--------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNC  154 (307)
T ss_dssp             CCCG--------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             cccc--------cccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccce
Confidence            9863        344667889999999999999999987654322      23467788888999999999999999999


Q ss_pred             ccccccccc---hhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE-EEEcCCCCCCHHHHHHHHHHHh
Q 015872          229 FMQGLIGQY---AVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT-LTFSGPRAWTTQEVITLCERLA  303 (399)
Q Consensus       229 ~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~-~~l~~~~~~s~~e~~~~~~~~~  303 (399)
                      +|+...+.+   ......+. ..+...++..++|+|++|+|++++.+++++...++. |++++++.+|+.|+++.+.+++
T Consensus       155 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~  234 (307)
T d1qyca_         155 FAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI  234 (307)
T ss_dssp             EHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred             ecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHH
Confidence            998654432   22333333 233344677789999999999999999987766664 5667778899999999999999


Q ss_pred             CCCCCeeecCHHHHH
Q 015872          304 GQDANVTMVPVSVLR  318 (399)
Q Consensus       304 g~~~~~~~~~~~~~~  318 (399)
                      |.+.+++.+|.+...
T Consensus       235 G~~~~~~~~~~~~~~  249 (307)
T d1qyca_         235 DKTLEKAYVPEEEVL  249 (307)
T ss_dssp             TSCCEEEEECHHHHH
T ss_pred             CCCCcEEECCHHHHH
Confidence            999999999987553

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.1e-30  Score=226.84  Aligned_cols=204  Identities=15%  Similarity=0.153  Sum_probs=161.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      |++|+|||||||||||++|+++|+++|  ++|++++|++.+... .....++...+|+.+.+++.++++++|+|||++|.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-cccceeeeeeecccccccccccccccccccccccc
Confidence            567899999999999999999999999  489999997554332 23346888899999999999999999999999984


Q ss_pred             C----CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCcccccc
Q 015872          159 R----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLCGFMQGL  233 (399)
Q Consensus       159 ~----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~-~~ilRp~~~~~~~  233 (399)
                      .    +...+.++|+.++.+++++|++.++++||++|+.+++..+..+|+.+|..+|+++++.+++ ++|+||+.+||+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1          91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred             cccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhccccccccceEEecCceeecCC
Confidence            3    3455678899999999999999999999999999999999999999999999999999986 8999999999864


Q ss_pred             cccchhhhccccccc-cCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          234 IGQYAVPILEEKSVW-GTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       234 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      ........+...... ..+.......|+++|+|++++.++.++.. ++.+.+.+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         171 QESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             GGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            332111111111011 11222333679999999999999988764 45666654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.96  E-value=9.7e-28  Score=226.41  Aligned_cols=228  Identities=19%  Similarity=0.229  Sum_probs=180.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-cc-cccCCcEEEEccCCCCCc-HHHHhcCCCEEEECCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DF-LRDWGATVVNADLSKPET-IPATLVGVHTVIDCATG  158 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~~-l~~~~v~~~~~Dl~d~~~-l~~~~~~~d~Vi~~a~~  158 (399)
                      ++|+|+|||||||||++|+++|+++||+|++++|+..+.. .. ....+++++++|+.|.++ +..++.++|++++....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            3688999999999999999999999999999999865532 22 233489999999998654 67888999999988653


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC----CCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCccccccc
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLI  234 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~----~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~~~~~~~  234 (399)
                      .     ...++..+.+++++|+++|++++|+.||...    ...+..+|..+|...|+++.+.+++++++||+.+++++.
T Consensus        82 ~-----~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~  156 (350)
T d1xgka_          82 Q-----AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFT  156 (350)
T ss_dssp             T-----TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred             c-----cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhccCceeeeeceeecccc
Confidence            2     2356788899999999999988888887653    234557889999999999999999999999999987764


Q ss_pred             ccchhh----hc-cccc--cccCCCCcceeceeH-HHHHHHHHHHHhCC--ccCCcEEEEcCCCCCCHHHHHHHHHHHhC
Q 015872          235 GQYAVP----IL-EEKS--VWGTDALTRIAYMDT-QDIARLTFVALRNE--KINGRTLTFSGPRAWTTQEVITLCERLAG  304 (399)
Q Consensus       235 ~~~~~~----~~-~~~~--~~~~~~~~~~~~v~v-~Dva~~i~~~l~~~--~~~g~~~~l~~~~~~s~~e~~~~~~~~~g  304 (399)
                      ......    .. .+..  ..+..++.+++++++ +|+++++..++.++  ...|++|+++++ .+|+.|+++++++++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~-~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         157 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQVCAAFSRALN  235 (350)
T ss_dssp             SSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-EECHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC-cCCHHHHHHHHHHHHC
Confidence            432211    11 1111  122345677788986 89999999999763  356899999985 6999999999999999


Q ss_pred             CCCCeeecCHH
Q 015872          305 QDANVTMVPVS  315 (399)
Q Consensus       305 ~~~~~~~~~~~  315 (399)
                      ++++++++|..
T Consensus       236 ~~v~~~~vp~~  246 (350)
T d1xgka_         236 RRVTYVQVPKV  246 (350)
T ss_dssp             SCEEEEECSSC
T ss_pred             CcceEEECCHH
Confidence            99999888753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.4e-28  Score=227.14  Aligned_cols=264  Identities=14%  Similarity=0.138  Sum_probs=168.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCC-CccccccCCcEEEEccCCCCCc-HHH-----HhcCCCEEEECCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA-PADFLRDWGATVVNADLSKPET-IPA-----TLVGVHTVIDCAT  157 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~-~~~~l~~~~v~~~~~Dl~d~~~-l~~-----~~~~~d~Vi~~a~  157 (399)
                      |||||||||||++|++.|+++|+ +|+++++-... ....+....+    .|..+.+. ...     .+..+++|+|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNI----ADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCC----SEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccch----hhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999999999995 79988753221 1111111111    12111111 122     2246899999997


Q ss_pred             C-----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCC------------CCCCCCcHHHHHHHHHHHHH----h
Q 015872          158 G-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEIKYCTEQFLQ----D  216 (399)
Q Consensus       158 ~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~------------~~~~~~~y~~~K~~~E~~l~----~  216 (399)
                      .     .+...+..+|+.++.+++++++..+++.+++.|+...            ...+.+.|+.+|...|.+++    +
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~  157 (307)
T d1eq2a_          78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (307)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            2     2233445688999999999999999965444444322            13456789999999999885    4


Q ss_pred             CCCCEEEEecCcccccccc----------cchhhhccccc--cccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEE
Q 015872          217 SGLPHVIIRLCGFMQGLIG----------QYAVPILEEKS--VWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTF  284 (399)
Q Consensus       217 ~g~~~~ilRp~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l  284 (399)
                      .+++++++||+.+||....          .+...+..+..  ++.+++...++|+|++|+++++..+++++.  ...||+
T Consensus       158 ~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~~~~~~  235 (307)
T d1eq2a_         158 ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIFNL  235 (307)
T ss_dssp             CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEEEE
T ss_pred             cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--cccccc
Confidence            7899999999999974321          11223333432  222344556699999999999999998764  469999


Q ss_pred             cCCCCCCHHHHHHHHHHHhCCCCCeeecCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCC
Q 015872          285 SGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDA  364 (399)
Q Consensus       285 ~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p  364 (399)
                      ++++.+|++|+++++.+..+. .++..+|....               ....        .......|.+++++++||+|
T Consensus       236 ~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~---------------~~~~--------~~~~~~~d~~k~~~~~~~~p  291 (307)
T d1eq2a_         236 GTGRAESFQAVADATLAYHKK-GQIEYIPFPDK---------------LKGR--------YQAFTQADLTNLRAAGYDKP  291 (307)
T ss_dssp             SCSCCBCHHHHHHHC---------------------------------------------CCCSCCBCCHHHHHTTCCCC
T ss_pred             ccccchhHHHHHHHHHHhcCC-CCeeEeeCCcc---------------CCCC--------CceeeecCHHHHHHHHCCCC
Confidence            999999999999999887653 23333222110               0000        00111247789999999999


Q ss_pred             CccccHHHHHHHHHHHH
Q 015872          365 KDIITLEKYLQDYFTNI  381 (399)
Q Consensus       365 ~~~~~lee~l~~~~~~~  381 (399)
                      .  ++|+|+|+++++|+
T Consensus       292 ~--~sl~egi~~~i~w~  306 (307)
T d1eq2a_         292 F--KTVAEGVTEYMAWL  306 (307)
T ss_dssp             C--CCHHHHHHHHHHHT
T ss_pred             C--CCHHHHHHHHHHhC
Confidence            8  89999999999986

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.95  E-value=1.2e-28  Score=226.71  Aligned_cols=260  Identities=18%  Similarity=0.128  Sum_probs=185.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCC---
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG---  158 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~---  158 (399)
                      |||||||||||||++|++.|.++|+.| ++++....            +.+|++|.+.+.++++  ++|+|||+||.   
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            679999999999999999999999755 44544221            2489999999999987  57999999983   


Q ss_pred             ----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhCCCCE
Q 015872          159 ----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (399)
Q Consensus       159 ----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~-------------~~~~~~y~~~K~~~E~~l~~~g~~~  221 (399)
                          ..+.....+|+.++.+++++|++.++ +++++||..++             ..|.+.|+.+|..+|+++++.....
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~  146 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH  146 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSE
T ss_pred             cccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhccc
Confidence                23344567899999999999999887 67777776432             2355789999999999999888888


Q ss_pred             EEEecCccccccccc----chhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC---CccCCcEEEEcCCCCCCHHH
Q 015872          222 VIIRLCGFMQGLIGQ----YAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN---EKINGRTLTFSGPRAWTTQE  294 (399)
Q Consensus       222 ~ilRp~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~---~~~~g~~~~l~~~~~~s~~e  294 (399)
                      .++|++.++.+....    +...+..+..+...+ ....+++|+.|+++++..+++.   ....+++||+++++.++..|
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~  225 (298)
T d1n2sa_         147 LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN-DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD  225 (298)
T ss_dssp             EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC-SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred             ccccccceeeccCCccchhhhhhhcccceeeccc-ceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHH
Confidence            888887766322111    222233333444333 3445899999999999888763   33346899999999999999


Q ss_pred             HHHHHHHHhCC---CCCeee---cCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhccCccccccccccccccCCCCCccc
Q 015872          295 VITLCERLAGQ---DANVTM---VPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDII  368 (399)
Q Consensus       295 ~~~~~~~~~g~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~  368 (399)
                      +++.+.+..+.   ...+..   ++...                      +.....+......|++|+++.|||+|.   
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~~~~i~~~~----------------------~~~~a~RP~~~~ld~~K~~~~~~~~~~---  280 (298)
T d1n2sa_         226 YAALVFDEARKAGITLALTELNAVPTSA----------------------YPTPASRPGNSRLNTEKFQRNFDLILP---  280 (298)
T ss_dssp             HHHHHHHHHHHHTCCCCCCEEEEECSTT----------------------SCCSSCCCSBCCBCCHHHHHHHTCCCC---
T ss_pred             HHHHHHhhhhccCccccccceeeeehhh----------------------cCccCCCccccccCHHHHHHHHCCCCC---
Confidence            99998876543   222211   11100                      000001111223588999999999997   


Q ss_pred             cHHHHHHHHHHHHHH
Q 015872          369 TLEKYLQDYFTNILK  383 (399)
Q Consensus       369 ~lee~l~~~~~~~~~  383 (399)
                      +++|+|+++++++..
T Consensus       281 ~~~~gl~~~i~~~~~  295 (298)
T d1n2sa_         281 QWELGVKRMLTEMFT  295 (298)
T ss_dssp             BHHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHh
Confidence            899999999998864

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=2.5e-27  Score=211.07  Aligned_cols=217  Identities=20%  Similarity=0.298  Sum_probs=165.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCc--EEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYD--VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~--V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .+++|||||||||||+++++.|+++||+  |++++|++.+...  ...+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK--IGGEADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH--TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh--ccCCcEEEEeeeccccccccccccceeeEEEEeec
Confidence            3579999999999999999999999976  5566776433221  12478999999999999999999999999999721


Q ss_pred             --------------------CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCC-------CCcHHHHHHHHHH
Q 015872          160 --------------------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP-------EVPLMEIKYCTEQ  212 (399)
Q Consensus       160 --------------------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~-------~~~y~~~K~~~E~  212 (399)
                                          .......+|+.++.++++.+.....+++.+.|+...+...       ...|...+...+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
T d2q46a1          80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  159 (252)
T ss_dssp             CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             cccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhh
Confidence                                1223345788999999999999999999999987764322       2457788888888


Q ss_pred             HHHhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcCCC---C
Q 015872          213 FLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPR---A  289 (399)
Q Consensus       213 ~l~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~~~---~  289 (399)
                      +..+.+++++++||+++|++..... ..........   .....+++|++|+|++++.+++++...|++|||+++.   .
T Consensus       160 ~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~  235 (252)
T d2q46a1         160 YLADSGTPYTIIRAGGLLDKEGGVR-ELLVGKDDEL---LQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTS  235 (252)
T ss_dssp             HHHHSSSCEEEEEECEEECSCTTSS-CEEEESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTS
T ss_pred             hhhcccccceeecceEEECCCcchh-hhhhccCccc---ccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCC
Confidence            8899999999999999998653221 1111111111   1233479999999999999999988889999998743   3


Q ss_pred             CCHHHHHHHHHHHhC
Q 015872          290 WTTQEVITLCERLAG  304 (399)
Q Consensus       290 ~s~~e~~~~~~~~~g  304 (399)
                      .+++|+.+++.++.+
T Consensus       236 ~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         236 TPTKDFKALFSQVTS  250 (252)
T ss_dssp             CCCCCHHHHHTTCCC
T ss_pred             hhHHHHHHHHHHHHh
Confidence            567888888766544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.4e-26  Score=202.88  Aligned_cols=185  Identities=23%  Similarity=0.244  Sum_probs=138.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-cCCCEEEECCCC-
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATG-  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-~~~d~Vi~~a~~-  158 (399)
                      +|+|||||||||||++|+++|+++|+  +|++++|++.....     .+   ..+..|..++.+.+ .++|+||||+|. 
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~-----~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP-----RL---DNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT-----TE---ECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc-----cc---cccccchhhhhhccccchheeeeeeeee
Confidence            58999999999999999999999997  67777775433211     22   33333333333333 468999999983 


Q ss_pred             ----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCC-EEEEecCcccccc
Q 015872          159 ----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLCGFMQGL  233 (399)
Q Consensus       159 ----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~-~~ilRp~~~~~~~  233 (399)
                          .....+...|+.++.+++++|++.++++|+++|+.+++..+...|..+|..+|+.+++.+++ ++|+||+.+||+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1          74 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred             ccccccccccccchhhhhhhcccccccccccccccccccccccccccchhHHHHHHhhhccccccccceeeCCcceeCCc
Confidence                23456778999999999999999999999999999999999999999999999999998875 9999999999764


Q ss_pred             cccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          234 IGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                      ........+.. .+.. ....++++||++|+|++++.+++++..
T Consensus       154 ~~~~~~~~~~~-~~~~-~~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         154 EEFRLAEILAA-PIAR-ILPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             SCEEGGGGTTC-CCC-----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             ccccHHHHHHH-HHhh-ccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            33222222111 1111 112345789999999999999988753

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.79  E-value=1.6e-18  Score=153.66  Aligned_cols=206  Identities=14%  Similarity=0.144  Sum_probs=148.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      .++.|+++||||++.||..+++.|+++|++|.+.+|+.++..+..+..+++.+++|++|++++.++++       ++|++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            45678999999999999999999999999999999986554444455688999999999988877663       68999


Q ss_pred             EECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCC-CCCCCcHHHHHHHHHHHHH-
Q 015872          153 IDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD-KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       153 i~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~-~~~~~~y~~~K~~~E~~l~-  215 (399)
                      ||+||.....           ...++|+.++..+.+++..    .+-..++++||.... ......|+.+|..++.+.+ 
T Consensus        82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaal~~ltk~  161 (242)
T d1ulsa_          82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT  161 (242)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHHHHHHHHH
Confidence            9999943322           2235788888777776643    344477777776543 3345679999999998763 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCC
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~  287 (399)
                            ..|+++..|.||.+..+..........+.  ....-+-.  -+...+|+|.+++.++.+.  -..|+++.+.||
T Consensus       162 lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~--~~~~~pl~--R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  237 (242)
T d1ulsa_         162 LALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK--AIAATPLG--RAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (242)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH--HHHTCTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHH--HHhcCCCC--CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCC
Confidence                  36899999999998765443322111110  00000111  3567799999999998653  347899999988


Q ss_pred             CC
Q 015872          288 RA  289 (399)
Q Consensus       288 ~~  289 (399)
                      ..
T Consensus       238 ~t  239 (242)
T d1ulsa_         238 RT  239 (242)
T ss_dssp             TT
T ss_pred             cc
Confidence            53

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.8e-18  Score=153.68  Aligned_cols=207  Identities=16%  Similarity=0.130  Sum_probs=146.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc---CCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~  155 (399)
                      .++.|+++||||++.||.++++.|+++|++|.+.+|+.++..+...+ .++..+.+|++|+++++++++   .+|++||+
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            45679999999999999999999999999999999985443322222 368899999999999988876   58999999


Q ss_pred             CCCCCCCc-----------chhccHHHHHHHHHHHH-----HcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH--
Q 015872          156 ATGRPEEP-----------IKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       156 a~~~~~~~-----------~~~~n~~~~~~l~~aa~-----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~--  215 (399)
                      ||......           ..++|+.++..+.+++.     +.+-.++|++||.....  .....|+.+|..++.+.+  
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  163 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence            99433222           23578887776666543     22346899999986543  234579999999998763  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                           ..|+++..|.||.+..+..............+...-+..  -+...+|+|++++.++.+..  ..|+++.+.||-
T Consensus       164 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG--KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence                 368999999999887654332211100000011101111  36778999999999886533  478999998873

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.78  E-value=3.9e-18  Score=150.59  Aligned_cols=198  Identities=14%  Similarity=0.170  Sum_probs=143.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~V  152 (399)
                      +.+.|+|+||||++.||.++++.|+++|++|.+.+|+.+...      ++..+++|++|++++.++++       ++|++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            567899999999999999999999999999999999854432      56789999999988776653       68999


Q ss_pred             EECCCCCCC-----------CcchhccHHHHHHHHH----HHHHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          153 IDCATGRPE-----------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       153 i~~a~~~~~-----------~~~~~~n~~~~~~l~~----aa~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ||+||....           +..+++|+.++..+.+    ..++.+-.++|++||....  ......|+.+|..++.+.+
T Consensus        78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~  157 (237)
T d1uzma1          78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR  157 (237)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH
T ss_pred             EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHH
Confidence            999993221           2224578888766554    4456666799999998663  2345679999999998763


Q ss_pred             -------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 -------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 -------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                             ..|+++..|.||.+..+....+.....+..  ...-+..  -+...+|+|.+++.++.+..  ..|+++.+.|
T Consensus       158 ~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~--~~~~pl~--R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         158 SIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA--LQFIPAK--RVGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHH--GGGCTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHH--HhcCCCC--CCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence                   378999999999987655433211111100  0000111  36678999999999986543  4689999988


Q ss_pred             C
Q 015872          287 P  287 (399)
Q Consensus       287 ~  287 (399)
                      |
T Consensus       234 G  234 (237)
T d1uzma1         234 G  234 (237)
T ss_dssp             T
T ss_pred             C
Confidence            7

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.78  E-value=2.8e-18  Score=152.10  Aligned_cols=201  Identities=17%  Similarity=0.132  Sum_probs=146.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||++.||.++++.|+++|++|.+.+|+.++......+  ..+.++++|++|++++.++++       .+|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            45678999999999999999999999999999999985443222222  257889999999988876663       689


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      ++||+||.....           ..+++|+.++..+.+++    ++.+-.++|++||.....  .....|+.+|..++.+
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence            999999943222           22357888887766654    444556899999987643  3346799999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTF  284 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l  284 (399)
                      .+       ..|+++..|.||.+..+......... ..  .    +..  -+...+|+|++++.++.+.  ...|+++.+
T Consensus       163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~--~----pl~--R~~~p~diA~~v~fL~s~~s~~itG~~i~v  233 (244)
T d1nffa_         163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI-FQ--T----ALG--RAAEPVEVSNLVVYLASDESSYSTGAEFVV  233 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC-SC--C----SSS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH-Hh--c----ccc--CCCCHHHHHHHHHHHhChhhCCCcCCEEEE
Confidence            63       37899999999988765433221111 00  0    111  3678899999999998653  347899999


Q ss_pred             cCCCC
Q 015872          285 SGPRA  289 (399)
Q Consensus       285 ~~~~~  289 (399)
                      .||..
T Consensus       234 DGG~~  238 (244)
T d1nffa_         234 DGGTV  238 (244)
T ss_dssp             STTGG
T ss_pred             CCCee
Confidence            88753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.8e-18  Score=153.33  Aligned_cols=205  Identities=13%  Similarity=0.102  Sum_probs=146.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc---CCCEEEEC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~---~~d~Vi~~  155 (399)
                      ..+.|+++||||++.||+.+++.|+++|++|.+.+|+.++..+..++ .++..+.+|++|++++.++++   ++|++||+
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            35678999999999999999999999999999999985443322222 368899999999999988886   58999999


Q ss_pred             CCCCCCCc-----------chhccHHHHHHHHHHHHH----c-CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH--
Q 015872          156 ATGRPEEP-----------IKKVDWEGKVALIQCAKA----M-GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       156 a~~~~~~~-----------~~~~n~~~~~~l~~aa~~----~-~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~--  215 (399)
                      ||......           ..++|+.++..+.+++..    . +-.++|++||.....  .....|+.+|..++.+.+  
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  161 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  161 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHH
Confidence            99433222           235788888777765532    2 335899999886543  234579999999998764  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhh--hccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVP--ILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSG  286 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~  286 (399)
                           ..|+++..|.||.+..++.......  ...  .+...-+-.  -+...+|+|++++.++.+..  ..|+++.+.|
T Consensus       162 A~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~pl~--R~~~peeva~~v~fL~S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         162 AMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLR--KFAEVEDVVNSILFLLSDRSASTSGGGILVDA  237 (242)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHSTTS--SCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             HHHhCccCeecccCCCCCccCHHHHhhcCCHHHHH--HHHhcCCCC--CCcCHHHHHHHHHHHhCchhcCcCCceEEeCc
Confidence                 3689999999998875543322110  000  000000111  36678999999999986533  4789999998


Q ss_pred             CC
Q 015872          287 PR  288 (399)
Q Consensus       287 ~~  288 (399)
                      |.
T Consensus       238 G~  239 (242)
T d1cyda_         238 GY  239 (242)
T ss_dssp             TG
T ss_pred             ch
Confidence            74

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.77  E-value=2.6e-18  Score=152.77  Aligned_cols=207  Identities=13%  Similarity=0.091  Sum_probs=146.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi  153 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.+ ..+..+..+...+++|++|++++.++++       ++|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-HHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            45789999999999999999999999999999999844 3333344478899999999988776653       689999


Q ss_pred             ECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 015872          154 DCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (399)
Q Consensus       154 ~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~-  215 (399)
                      |+||.....           ...++|+.++..+.+++.    +.+-.++|++||....  .....+|+.+|..++.+.+ 
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~  161 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRS  161 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHH
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHH
Confidence            999933221           223588888877776664    4455699999998753  3345679999999998753 


Q ss_pred             ------hCCCCEEEEecCcccccccccchhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          216 ------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       216 ------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                            ..|+++..|.||.+-.+.............   ..+......+ -+...+|+|++++.++.+..  ..|+++.+
T Consensus       162 lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~-R~~~pedia~~v~fL~S~~s~~itG~~i~v  240 (248)
T d2d1ya1         162 LALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR-RLGKPEEVAEAVLFLASEKASFITGAILPV  240 (248)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhcCCCCcEEEc
Confidence                  378999999999887544322211100000   0011100111 36678999999999986533  47899999


Q ss_pred             cCCCC
Q 015872          285 SGPRA  289 (399)
Q Consensus       285 ~~~~~  289 (399)
                      .||-.
T Consensus       241 DGG~t  245 (248)
T d2d1ya1         241 DGGMT  245 (248)
T ss_dssp             STTGG
T ss_pred             CcCcc
Confidence            98753

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.77  E-value=6.2e-18  Score=150.36  Aligned_cols=207  Identities=15%  Similarity=0.138  Sum_probs=140.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-ccccc--CCcEEEEccCCCCCcHHHHh-------cCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLRD--WGATVVNADLSKPETIPATL-------VGV  149 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-~~l~~--~~v~~~~~Dl~d~~~l~~~~-------~~~  149 (399)
                      .++.|.++||||++.||.++++.|+++|++|.+.+|+..+.. ..++.  .++..+++|++|++++.+++       .++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            356789999999999999999999999999999999754322 12222  25788999999998887765       369


Q ss_pred             CEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHH
Q 015872          150 HTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (399)
Q Consensus       150 d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~  212 (399)
                      |++||+||..+...           ..++|+.++..+.+++    ++.+-.++|++||....  ......|+.+|..++.
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  161 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHH
Confidence            99999999433222           2357877777766655    45555699999998653  2334679999999997


Q ss_pred             HHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEE
Q 015872          213 FLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLT  283 (399)
Q Consensus       213 ~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~  283 (399)
                      +.+       ..|+++..|.||.+................ ........+ -+...+|+|++++.++.+..  ..|+++.
T Consensus       162 ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~~~~~~~l~-r~~~pedvA~~v~fL~S~~s~~itG~~i~  239 (247)
T d2ew8a1         162 FTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV-LPNMLQAIP-RLQVPLDLTGAAAFLASDDASFITGQTLA  239 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSSSC-SCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHH-HHHHhccCC-CCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            653       478999999999887554332211111100 000000111 25577999999999986533  4789999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||-
T Consensus       240 vDGG~  244 (247)
T d2ew8a1         240 VDGGM  244 (247)
T ss_dssp             ESSSC
T ss_pred             ECCCE
Confidence            98873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=2.7e-18  Score=152.29  Aligned_cols=204  Identities=14%  Similarity=0.105  Sum_probs=146.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc--cCCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.+...+...  ..+...+++|++|++++.++++       ++|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            456899999999999999999999999999999998543322111  1257889999999988776664       6999


Q ss_pred             EEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      +||+||......           ..++|+.++..+.+++    ++.+-.++|++||....  ......|..+|..++.+.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS  161 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence            999998433222           2357888887766665    44455699999997642  344568999999999876


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      +       ..|+++..|.||.+-.+....+.......  +...-+-.  -+...+|+|.+++.++.+..  ..|+++.+.
T Consensus       162 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~pl~--R~~~pedvA~~v~fL~S~~s~~itGq~i~vd  237 (243)
T d1q7ba_         162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAG--ILAQVPAG--RLGGAQEIANAVAFLASDEAAYITGETLHVN  237 (243)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH--HHTTCTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHH--HHhcCCCC--CCCCHHHHHHHHHHHhCchhcCCcCCeEEEC
Confidence            3       37899999999988765443322211110  10000111  36678999999999996543  478999999


Q ss_pred             CCC
Q 015872          286 GPR  288 (399)
Q Consensus       286 ~~~  288 (399)
                      ||-
T Consensus       238 GG~  240 (243)
T d1q7ba_         238 GGM  240 (243)
T ss_dssp             TTS
T ss_pred             CCe
Confidence            874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.76  E-value=8.7e-18  Score=149.77  Aligned_cols=206  Identities=14%  Similarity=0.109  Sum_probs=146.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .+.|+++||||++.||.+++++|+++|++|.+.+|+.++..+..++.  .+.++++|++|++++.++++       .+|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            45789999999999999999999999999999999865443333333  47889999999988877663       6899


Q ss_pred             EEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 015872          152 VIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       152 Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l  214 (399)
                      +||+||......           ..++|+.++..+.+++    ++.+-.++|++||....  ......|..+|..++.+.
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS  162 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHH
Confidence            999999433222           2357888877766655    44555699999998653  233467999999999876


Q ss_pred             H-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEc
Q 015872          215 Q-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFS  285 (399)
Q Consensus       215 ~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~  285 (399)
                      +       ..|+++..|.||.+..++.........+  .....-+-.| -.+..+|+|.+++.++.+..  ..|+++.+.
T Consensus       163 ~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~--~~~~~~pl~R-~g~~PedvA~~v~fL~S~~a~~itG~~i~vD  239 (254)
T d1hdca_         163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE--GNYPNTPMGR-VGNEPGEIAGAVVKLLSDTSSYVTGAELAVD  239 (254)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST--TSCTTSTTSS-CB-CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH--HHHhCCCCCC-CCCCHHHHHHHHHHHhchhhCCCCCceEEeC
Confidence            3       3789999999998876544332211111  1111111112 11356999999999986533  478999999


Q ss_pred             CCCC
Q 015872          286 GPRA  289 (399)
Q Consensus       286 ~~~~  289 (399)
                      ||..
T Consensus       240 GG~t  243 (254)
T d1hdca_         240 GGWT  243 (254)
T ss_dssp             TTTT
T ss_pred             CCcc
Confidence            8753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.76  E-value=1.8e-18  Score=154.77  Aligned_cols=209  Identities=12%  Similarity=0.084  Sum_probs=146.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.++..+...+  .++..+++|++|++++.++++       ++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5578999999999999999999999999999999985443322222  357889999999998877763       6899


Q ss_pred             EEECCCCCCCC-----------cchhccHHHHHHHHHHHH----Hc-CCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AM-GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~-~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                      +||+||.....           ...++|+.++..+.+++.    +. +-.++|++||.....  .....|..+|..++.+
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL  162 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence            99999943222           223578888877776542    22 345899999987543  3346799999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhcccc--------ccccC-CCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--------SVWGT-DALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      .+       ..|+++..|.||.+-.+.............        ..+.. -+-.  -+...+|+|.+++.++.+.. 
T Consensus       163 t~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--R~~~p~evA~~v~fL~S~~a~  240 (256)
T d1k2wa_         163 TQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFG--RMGRAEDLTGMAIFLATPEAD  240 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS--SCBCHHHHHHHHHHTTSGGGT
T ss_pred             HHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhC
Confidence            63       378999999999887554332221111000        00000 0111  26678999999999886533 


Q ss_pred             -cCCcEEEEcCCCCCC
Q 015872          277 -INGRTLTFSGPRAWT  291 (399)
Q Consensus       277 -~~g~~~~l~~~~~~s  291 (399)
                       ..|+++.+.||..+|
T Consensus       241 ~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         241 YIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             TCCSCEEEESTTSSCC
T ss_pred             CccCceEEECcchhhC
Confidence             468999999987654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.76  E-value=4.8e-18  Score=151.39  Aligned_cols=206  Identities=15%  Similarity=0.120  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c-c--cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L-R--DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l-~--~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|+++||||++.||..+++.|+++|++|.+.+|+.++..+.   + .  ...+..+++|++|++++.++++       
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999985443221   1 1  1246789999999988777663       


Q ss_pred             CCCEEEECCCCCCCCcc-----------hhccHHHHHHHHHHHH----HcCCcEEEEecccCCC--CCC-CCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPEEPI-----------KKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHP-EVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~~-----------~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~--~~~-~~~y~~~K~~  209 (399)
                      ++|++||+||......+           .++|+.++..+.+++.    +.+-.++|++||....  ..+ ...|+.+|..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaa  162 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG  162 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHh
Confidence            69999999994333222           3578888877766654    3445599999886432  223 4579999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      ++.+.+       ..|+++..|.||.+..+........--....+...-+-.  -+...+|+|++++.++.+..  ..|+
T Consensus       163 l~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~v~fL~S~~a~~itG~  240 (251)
T d1vl8a_         163 VASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG--RTGVPEDLKGVAVFLASEEAKYVTGQ  240 (251)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS--SCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC--CCCCHHHHHHHHHHHhCchhCCCcCc
Confidence            998763       378999999999887554432211000000000000111  25577999999999886533  4689


Q ss_pred             EEEEcCCC
Q 015872          281 TLTFSGPR  288 (399)
Q Consensus       281 ~~~l~~~~  288 (399)
                      ++.+.||.
T Consensus       241 ~i~vDGG~  248 (251)
T d1vl8a_         241 IIFVDGGW  248 (251)
T ss_dssp             EEEESTTG
T ss_pred             EEEeCcCe
Confidence            99998874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.2e-19  Score=159.65  Aligned_cols=211  Identities=13%  Similarity=0.052  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc----cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~----~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ..|.++||||++.||.++++.|+++|++|.+.+|+.++..+   .+.    ..++..+++|++|++++.++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            36889999999999999999999999999999998543221   111    2257889999999988877663       


Q ss_pred             CCCEEEECCCCCCCCcc---hhccHHHHHHHHHHHHH----cC---CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEEPI---KKVDWEGKVALIQCAKA----MG---IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~~---~~~n~~~~~~l~~aa~~----~~---v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~  215 (399)
                      ++|++||+||......+   .++|+.++..+..++..    .+   -.+||++||....  ......|+.+|..++.+.+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            68999999996555444   46788877766665533    22   2469999998753  2334579999998886532


Q ss_pred             ---------hCCCCEEEEecCcccccccccchhhhcccc-----ccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcE
Q 015872          216 ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-----SVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRT  281 (399)
Q Consensus       216 ---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~  281 (399)
                               ..|+++..|.||.+-.++...+......+.     ..+...-... .+...+|+|++++.++.++...|++
T Consensus       162 s~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-r~~~pedvA~~v~fL~s~~~itG~~  240 (254)
T d2gdza1         162 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY-GILDPPLIANGLITLIEDDALNGAI  240 (254)
T ss_dssp             HHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH-CCBCHHHHHHHHHHHHHCTTCSSCE
T ss_pred             HHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHHcCCCCCCCE
Confidence                     378999999999886554333221100000     0000000000 3567799999999999987778999


Q ss_pred             EEEcCCCCCCHH
Q 015872          282 LTFSGPRAWTTQ  293 (399)
Q Consensus       282 ~~l~~~~~~s~~  293 (399)
                      +.+.||..+.++
T Consensus       241 i~VdGG~~~~~~  252 (254)
T d2gdza1         241 MKITTSKGIHFQ  252 (254)
T ss_dssp             EEEETTTEEEEC
T ss_pred             EEECCCCeeecc
Confidence            999998765544

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.9e-18  Score=153.76  Aligned_cols=208  Identities=14%  Similarity=0.154  Sum_probs=145.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc-CCcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      ..+.|+++||||++.||.++++.|+++|++|.+.+|+.+...+...+ .++..+++|++|++++.++++       ++|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            45678999999999999999999999999999999975433222112 267889999999988877663       6899


Q ss_pred             EEECCCCCC-CC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRP-EE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~-~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      +||+||... ..           ...++|+.++..+.+++.    +.+ .++|++||...  ......+|..+|..++.+
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  161 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAM  161 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHH
Confidence            999998321 11           123578888777666553    334 58999998764  334456899999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCC-ccCCcE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNE-KINGRT  281 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-~~~g~~  281 (399)
                      .+       ..|+++..|.||.+..+.............    ......+-.  -+...+|+|.+++.++.+. -..|++
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~g~p~eva~~v~fL~Sda~~itG~~  239 (250)
T d1ydea1         162 TKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG--RMGQPAEVGAAAVFLASEANFCTGIE  239 (250)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS--SCBCHHHHHHHHHHHHHHCTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC--CCCCHHHHHHHHHHHhCccCCCcCCe
Confidence            53       478999999999987554332211110000    000011111  3677899999999988542 237899


Q ss_pred             EEEcCCCCC
Q 015872          282 LTFSGPRAW  290 (399)
Q Consensus       282 ~~l~~~~~~  290 (399)
                      +.+.||..+
T Consensus       240 i~vDGG~~l  248 (250)
T d1ydea1         240 LLVTGGAEL  248 (250)
T ss_dssp             EEESTTTTS
T ss_pred             EEECCCccc
Confidence            999988543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.75  E-value=6.4e-18  Score=151.61  Aligned_cols=206  Identities=15%  Similarity=0.138  Sum_probs=140.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----cc---cCCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR---DWGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~---~~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+++||||++.||.++++.|+++|++|.+.+|+..+..+.    +.   ..++.++++|++|++++.++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999974332211    11   1257789999999988877764      


Q ss_pred             -CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~  209 (399)
                       ++|++||+||......           ..++|+.++..+.+++    ++.+-.++|++||.....  .....|+.+|..
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence             6899999999433222           2357777776655544    555666999999986543  334579999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccc---------cccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKS---------VWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      ++.+.+       ..|+++..|.||.+-.+..............         .+...-..+ -+...+|+|++++.++.
T Consensus       162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL-QFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC-CCBCHHHHHHHHHHHHS
T ss_pred             HHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhC
Confidence            997763       3789999999998876554433222111110         000000111 36778999999999986


Q ss_pred             CCc--cCCcEEEEcCC
Q 015872          274 NEK--INGRTLTFSGP  287 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~  287 (399)
                      +..  ..|+++.+.||
T Consensus       241 ~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGG  256 (260)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             hhhCCCcCCEEEECcc
Confidence            533  47899999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.75  E-value=8.7e-18  Score=150.53  Aligned_cols=207  Identities=14%  Similarity=0.078  Sum_probs=144.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc----cccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~----~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ++.|.++||||++.||.++++.|+++|++|.+.+|+.++..    +.+...  .+..+++|++|++++.++++       
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999999999999854322    222223  46789999999988877663       


Q ss_pred             CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCc-EEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQ-KYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~-~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                      ++|++||+||......           ..++|+.++..+.+++    ++.+-. .||++||....  ......|+.+|..
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaa  164 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG  164 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCcc
Confidence            6899999999433222           2357888877766554    444433 58889987653  2334679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      ++.+.+       ..|+++..|.||.+..+........-.....+...-+-.  -+...+|+|++++.++.+..  ..|+
T Consensus       165 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~pediA~~v~fL~S~~s~~itG~  242 (261)
T d1geea_         165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG--YIGEPEEIAAVAAWLASSEASYVTGI  242 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS--SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             chhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC--CCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            998764       378999999999887554332211000000000000111  25678999999999986533  4789


Q ss_pred             EEEEcCCCC
Q 015872          281 TLTFSGPRA  289 (399)
Q Consensus       281 ~~~l~~~~~  289 (399)
                      ++.+.||..
T Consensus       243 ~i~vDGG~s  251 (261)
T d1geea_         243 TLFADGGMT  251 (261)
T ss_dssp             EEEESTTGG
T ss_pred             eEEECCCee
Confidence            999999854

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.74  E-value=8.4e-18  Score=149.89  Aligned_cols=203  Identities=15%  Similarity=0.163  Sum_probs=142.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      ++.|.++||||++.||.++++.|+++|++|.+.+|+.++..   +.+...  .+..+++|++|++++.++++       .
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999754322   222222  47889999999988877664       6


Q ss_pred             CCEEEECCCCCCC--------C---cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHHHHH
Q 015872          149 VHTVIDCATGRPE--------E---PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (399)
Q Consensus       149 ~d~Vi~~a~~~~~--------~---~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E  211 (399)
                      +|++||+||....        +   ...++|+.++..+.+++    ++.+-.+||++||...  .......|+.+|..++
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  167 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI  167 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHH
Confidence            8999999983222        1   22347877776666554    4556679999999764  2334568999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..|.||.+..+..........+.  +...-+..  -+...+|+|++++.++.+..  ..|+++
T Consensus       168 ~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~--~~~~~pl~--R~~~pedvA~~v~fL~S~~s~~itG~~i  243 (251)
T d2c07a1         168 GFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKN--IISNIPAG--RMGTPEEVANLACFLSSDKSGYINGRVF  243 (251)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHH--HHTTCTTS--SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHH--HHhcCCCC--CCcCHHHHHHHHHHHhCchhCCCcCcEE
Confidence            8763       37899999999998765544332221111  00001111  26678999999999986543  478999


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.||
T Consensus       244 ~vDGG  248 (251)
T d2c07a1         244 VIDGG  248 (251)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            99887

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.74  E-value=3.9e-18  Score=152.67  Aligned_cols=208  Identities=13%  Similarity=0.114  Sum_probs=146.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---c----ccCCcEEEEccCCCCCcHHHHh-------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L----RDWGATVVNADLSKPETIPATL-------  146 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l----~~~~v~~~~~Dl~d~~~l~~~~-------  146 (399)
                      .+.|+++||||++.||..+++.|+++|++|.+.+|+.++....   +    ....+..+++|++|++++.+++       
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999975432211   1    1125778999999998887765       


Q ss_pred             cCCCEEEECCCCCC-CC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          147 VGVHTVIDCATGRP-EE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~-~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                      .++|++||+||... ..           ..+++|+.++..+.+++    ++.+-.++|++||....  ......|..+|.
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  161 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  161 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence            36999999998321 11           12357888887777665    34455689999998653  234467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc-----ccccCCCCcceeceeHHHHHHHHHHHHhCC-
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-----SVWGTDALTRIAYMDTQDIARLTFVALRNE-  275 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-  275 (399)
                      .++.+.+       ..|+++..|.||.+..++............     .-+...-..+ -+...+|+|.+++.++.+. 
T Consensus       162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-R~~~p~dvA~~v~fL~S~~s  240 (258)
T d1iy8a_         162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK-RYGEAPEIAAVVAFLLSDDA  240 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC-SCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchh
Confidence            9987653       368999999999987655433322211100     0011110111 3667899999999999653 


Q ss_pred             -ccCCcEEEEcCCCC
Q 015872          276 -KINGRTLTFSGPRA  289 (399)
Q Consensus       276 -~~~g~~~~l~~~~~  289 (399)
                       ...|+++.+.||..
T Consensus       241 ~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         241 SYVNATVVPIDGGQS  255 (258)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCCcCceEEcCcchh
Confidence             34789999999864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.8e-17  Score=147.98  Aligned_cols=206  Identities=15%  Similarity=0.158  Sum_probs=145.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHh-------c
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATL-------V  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~-------~  147 (399)
                      ..+.|+++||||++.||.++++.|+++|++|.+.+|+.++..   +.+...  .+..+++|++|++++.+++       .
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999999754322   122222  4788999999998877665       3


Q ss_pred             CCCEEEECCCCCCCC----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      ++|++||+||.....          ...++|+.++..+.+++    ++.+-.++|++||....  ......|+.+|..++
T Consensus        88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~  167 (255)
T d1fmca_          88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence            699999999933221          12357888877766655    44455589999987653  334568999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      .+.+       ..|+++..|.||.+..+.......+-.... +...-+-.  -+...+|+|++++.++.+..  ..|+++
T Consensus       168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~-~~~~~pl~--R~g~pedvA~~v~fL~S~~s~~itG~~i  244 (255)
T d1fmca_         168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-MLQHTPIR--RLGQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHH-HHHTCSSC--SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHH-HHhcCCCC--CCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            7763       378999999999887554332221110000 00000111  25678999999999986533  478999


Q ss_pred             EEcCCC
Q 015872          283 TFSGPR  288 (399)
Q Consensus       283 ~l~~~~  288 (399)
                      .+.||.
T Consensus       245 ~vDGG~  250 (255)
T d1fmca_         245 TVSGGG  250 (255)
T ss_dssp             EESTTS
T ss_pred             EECcCc
Confidence            999985

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.72  E-value=2.6e-17  Score=147.34  Aligned_cols=207  Identities=16%  Similarity=0.103  Sum_probs=144.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+++||||++.||.++++.|+++|++|.+.+|+.++..+.   +...  .+..+++|++|++++.++++       
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999999999975443222   2222  46788999999888766542       


Q ss_pred             -CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       .+|++||+||......           .+++|+.++..+.+++    ++.+-.++|++||....  ......|..+|..
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  164 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA  164 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence             3899999999433222           3357888887766655    44455699999997653  3345679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ++.+.+       ..|+++..|.||.+..+.............   .+...-+-.  -+...+|+|++++.++.+..  .
T Consensus       165 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~--R~g~pedvA~~v~fL~S~~s~~i  242 (259)
T d2ae2a_         165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR--RMGEPKELAAMVAFLCFPAASYV  242 (259)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC--SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhCCC
Confidence            998764       368999999999887554322211100000   000001111  26678999999999886533  4


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.||-
T Consensus       243 tG~~i~VDGG~  253 (259)
T d2ae2a_         243 TGQIIYVDGGL  253 (259)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCcEEEECCCe
Confidence            78999998874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.72  E-value=3.1e-17  Score=146.11  Aligned_cols=204  Identities=14%  Similarity=0.064  Sum_probs=142.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccc-cCCcEEEEccCCCCCcHHHHhc-------CC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR-DWGATVVNADLSKPETIPATLV-------GV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~-~~~v~~~~~Dl~d~~~l~~~~~-------~~  149 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.+....   .+. ..++.++++|++|++++.++++       ++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            567899999999999999999999999999999997543221   111 2257899999999988776653       68


Q ss_pred             CEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCc-EEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          150 HTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQ-KYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       150 d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~-~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      |++||+||.....           ..+++|+.++..+.+++.    +.+.. ++|++||....  ......|+.+|..++
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~  163 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR  163 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHh
Confidence            9999999943222           233588888887777654    33433 78999997653  233457999999987


Q ss_pred             HHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCc
Q 015872          212 QFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGR  280 (399)
Q Consensus       212 ~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~  280 (399)
                      .+.+         ..|+++..|.||.+..++.......-... .....-+-.  -+...+|+|++++.++.+..  ..|+
T Consensus       164 ~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~pl~--R~~~pedvA~~v~fL~S~~s~~itG~  240 (251)
T d1zk4a1         164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQRTKTPMG--HIGEPNDIAYICVYLASNESKFATGS  240 (251)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-TSTTTCTTS--SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             cchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHH-HHHhCCCCC--CCcCHHHHHHHHHHHhCchhCCCcCc
Confidence            6542         45899999999988755443322110000 000000111  36688999999999986533  4689


Q ss_pred             EEEEcCC
Q 015872          281 TLTFSGP  287 (399)
Q Consensus       281 ~~~l~~~  287 (399)
                      ++.+.||
T Consensus       241 ~i~vDGG  247 (251)
T d1zk4a1         241 EFVVDGG  247 (251)
T ss_dssp             EEEESTT
T ss_pred             EEEECcc
Confidence            9999887

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=2e-17  Score=148.05  Aligned_cols=207  Identities=15%  Similarity=0.110  Sum_probs=134.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---ccc--CCcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~~--~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+++||||++.||..+++.|+++|++|.+.+|+.++..+.   +..  .++..+.+|++|++++.++++       
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999999999985443221   111  257889999999887766542       


Q ss_pred             -CCCEEEECCCCCCC-----------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       .+|++||+||....           +...++|+.++..+.+++    ++.+-.++|++||....  ......|..+|..
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  164 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGA  164 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHH
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccc
Confidence             38999999993221           223368888887776655    44455699999997653  3345689999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCc
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGR  280 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~  280 (399)
                      ++.+.+       ..|+++..|.||.+..+........-..  ..+......+ -+...+|+|.+++.++.+.  -..|+
T Consensus       165 l~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~--~~~~~~~pl~-R~~~pedvA~~v~fL~S~~s~~iTG~  241 (259)
T d1xq1a_         165 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK--KVVISRKPLG-RFGEPEEVSSLVAFLCMPAASYITGQ  241 (259)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             hhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHH--HHHHhCCCCC-CCcCHHHHHHHHHHHhCchhcCCcCc
Confidence            998763       3789999999998875544332211111  0011000111 2567799999999988653  34689


Q ss_pred             EEEEcCCCC
Q 015872          281 TLTFSGPRA  289 (399)
Q Consensus       281 ~~~l~~~~~  289 (399)
                      ++.+.||-.
T Consensus       242 ~i~vDGG~s  250 (259)
T d1xq1a_         242 TICVDGGLT  250 (259)
T ss_dssp             EEECCCCEE
T ss_pred             EEEeCCCEE
Confidence            999988743

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.72  E-value=1.9e-17  Score=147.71  Aligned_cols=208  Identities=14%  Similarity=0.093  Sum_probs=142.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+++||||++.||.++++.|+++|++|.+.+|+.++..+...+  ....++++|++|++++.++++       .+|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            35678999999999999999999999999999999975433222221  247788999999888766653       689


Q ss_pred             EEEECCCCCCC-----------CcchhccHHHHHHHHHHHHHc---CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHH
Q 015872          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFL  214 (399)
Q Consensus       151 ~Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~---~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l  214 (399)
                      ++||+||....           +...++|+.++..+.+++...   +-.++|++||.....  .....|..+|..++.+.
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALT  162 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHH
Confidence            99999993322           122357888877766665432   225899999986542  33457999999998765


Q ss_pred             H-------h--CCCCEEEEecCcccccccccchhhhccccccccCCCCcce-eceeHHHHHHHHHHHHhCCc--cCCcEE
Q 015872          215 Q-------D--SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRI-AYMDTQDIARLTFVALRNEK--INGRTL  282 (399)
Q Consensus       215 ~-------~--~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~Dva~~i~~~l~~~~--~~g~~~  282 (399)
                      +       .  .++++..|.||.+..+........-.............++ .+...+|+|++++.++.+..  ..|+++
T Consensus       163 ~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i  242 (253)
T d1hxha_         163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL  242 (253)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEE
Confidence            3       1  3589999999988755433221111110001000111111 36778999999999986533  478999


Q ss_pred             EEcCC
Q 015872          283 TFSGP  287 (399)
Q Consensus       283 ~l~~~  287 (399)
                      .+.||
T Consensus       243 ~VDGG  247 (253)
T d1hxha_         243 HADNS  247 (253)
T ss_dssp             EESSS
T ss_pred             EECcc
Confidence            99887

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.72  E-value=4.4e-17  Score=145.71  Aligned_cols=207  Identities=15%  Similarity=0.081  Sum_probs=140.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +++.|+||||||++.||++++++|+++|++|++.+|+.++..+   .+...  .+..+.+|++|.+++.++++       
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999998543222   22222  46778999999988766652       


Q ss_pred             -CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~  209 (399)
                       .+|++||+||......           ..++|+.++..+.+++    ++.+..++|++||....  ......|..+|..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  162 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  162 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHH
Confidence             3799999999433222           2357777776666555    34456699999998753  3345679999999


Q ss_pred             HHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc----ccccCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          210 TEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK----SVWGTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       210 ~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      .+.+.+       ..|+++..|.||.+..++............    .+...-+-.  -+...+|+|.+++.++.+.  .
T Consensus       163 l~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg--R~~~pediA~~v~fL~S~~s~~  240 (258)
T d1ae1a_         163 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG--RAGKPQEVSALIAFLCFPAASY  240 (258)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC--SCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhChhhCC
Confidence            998764       368999999999987554333221111100    000000112  2678899999999999653  3


Q ss_pred             cCCcEEEEcCCC
Q 015872          277 INGRTLTFSGPR  288 (399)
Q Consensus       277 ~~g~~~~l~~~~  288 (399)
                      ..|+.+.+.||-
T Consensus       241 itG~~i~vDGG~  252 (258)
T d1ae1a_         241 ITGQIIWADGGF  252 (258)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CcCcEEEeCCCe
Confidence            478999998874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.71  E-value=1.1e-17  Score=150.77  Aligned_cols=209  Identities=11%  Similarity=0.072  Sum_probs=144.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc-CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD-WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~-~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .++.|.++||||++.||..+++.|+++|++|++.+|+.++..+   .+.. ..+.++++|++|++++.++++       .
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999997543222   2222 247789999999988877763       6


Q ss_pred             CCEEEECCCCCCC----------Cc---chhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCC-CcHHHHHH
Q 015872          149 VHTVIDCATGRPE----------EP---IKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPE-VPLMEIKY  208 (399)
Q Consensus       149 ~d~Vi~~a~~~~~----------~~---~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~-~~y~~~K~  208 (399)
                      +|++||+||....          +.   .+++|+.++..+.+++.    +.+-.++|++||.....  .+. ..|..+|.
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            8999999983211          11   23578888777766654    34555899998875432  222 36999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccc-cccc--cCCCCcceeceeHHHHHHHHHHHHhCC--c
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-KSVW--GTDALTRIAYMDTQDIARLTFVALRNE--K  276 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~v~v~Dva~~i~~~l~~~--~  276 (399)
                      .++.+.+       ..|+++..|.||.+..+........-... ....  ......  .+...+|+|++++.++.+.  -
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g--r~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG--TLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS--CCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC--CCcCHHHHHHHHHHHhChhhCC
Confidence            9998763       37899999999988765543322110000 0000  000111  3667899999999999653  3


Q ss_pred             cCCcEEEEcCCCCC
Q 015872          277 INGRTLTFSGPRAW  290 (399)
Q Consensus       277 ~~g~~~~l~~~~~~  290 (399)
                      ..|+++.+.||-..
T Consensus       241 itGq~i~VDGG~t~  254 (268)
T d2bgka1         241 VSGLNLVIDGGYTR  254 (268)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCceEEECcCccc
Confidence            47999999998543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=4.7e-17  Score=145.43  Aligned_cols=205  Identities=16%  Similarity=0.165  Sum_probs=142.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      |.++||||++.||.++++.|+++|++|.+.+|+.++..   +.+...  ++..+++|++|++++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            44699999999999999999999999999999854322   122222  57789999999988876653       6999


Q ss_pred             EEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcC-CcEEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 015872          152 VIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       152 Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~-v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~  213 (399)
                      +||+||..+..           ...++|+.++..+.+++.    +.+ -.++|++||....  ......|+.+|...+.+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL  161 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence            99999943322           223588888888776653    333 3579999987643  33345699999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhcccc--------ccccCCCCcceeceeHHHHHHHHHHHHhCCc--
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--------SVWGTDALTRIAYMDTQDIARLTFVALRNEK--  276 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--  276 (399)
                      .+       ..|+++..|.||.+..+....+........        .-+...-..+ -+...+|+|++++.++.+..  
T Consensus       162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG-RLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC-SCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCC-CCcCHHHHHHHHHHHhCchhCC
Confidence            63       478999999999887554433222111100        0000000111 26678999999999986533  


Q ss_pred             cCCcEEEEcCCCC
Q 015872          277 INGRTLTFSGPRA  289 (399)
Q Consensus       277 ~~g~~~~l~~~~~  289 (399)
                      ..|+++.+.||-.
T Consensus       241 itG~~i~vDGG~~  253 (255)
T d1gega_         241 MTGQSLLIDGGMV  253 (255)
T ss_dssp             CCSCEEEESSSSS
T ss_pred             ccCcEEEecCCEE
Confidence            4689999998743

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.2e-16  Score=145.76  Aligned_cols=208  Identities=11%  Similarity=0.092  Sum_probs=144.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccc-------cCCcEEEEccCCCCCcHHHHhc--
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLR-------DWGATVVNADLSKPETIPATLV--  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~-------~~~v~~~~~Dl~d~~~l~~~~~--  147 (399)
                      .++.|+++||||++.||.++++.|+++|++|++.+|+.++..   +.+.       ..++..+++|++|++++.++++  
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            466799999999999999999999999999999999754321   1111       1257889999999988877653  


Q ss_pred             -----CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH----cCCcEEEEecccCCCCC-CCCcHHHH
Q 015872          148 -----GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDKH-PEVPLMEI  206 (399)
Q Consensus       148 -----~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~~~~-~~~~y~~~  206 (399)
                           ++|++||+||.....           ...++|+.++..+.+++..    .+-.++|++|+...... ....|+.+
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~as  168 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA  168 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHH
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccchhH
Confidence                 689999999843221           2235788888887776643    34457888876554333 34568999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc--ccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK--SVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      |..++.+.+       ..|+++..|.||.+................  .....-+-.  -+...+|+|.+++.++.+.. 
T Consensus       169 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg--R~g~pedvA~~v~fL~Sd~s~  246 (297)
T d1yxma1         169 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK--RIGVPEEVSSVVCFLLSPAAS  246 (297)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS--SCBCTHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhc
Confidence            999998764       368999999999887543322111110000  000000111  25677999999999996533 


Q ss_pred             -cCCcEEEEcCCCC
Q 015872          277 -INGRTLTFSGPRA  289 (399)
Q Consensus       277 -~~g~~~~l~~~~~  289 (399)
                       ..|+++.+.||..
T Consensus       247 ~iTG~~i~VDGG~s  260 (297)
T d1yxma1         247 FITGQSVDVDGGRS  260 (297)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CcCCcEEEeCcChh
Confidence             4789999999853

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.71  E-value=7.1e-17  Score=144.67  Aligned_cols=206  Identities=13%  Similarity=0.161  Sum_probs=143.3

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      ++.+.|++|||||++.||.++++.|+++|++|.+.+|+.++..+...      ..++..+++|++|++++.++++     
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35668999999999999999999999999999999998665432221      1257889999999988877763     


Q ss_pred             --CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHHH----Hc-CCcEEEEecccCCCC---------CCC
Q 015872          148 --GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCAK----AM-GIQKYVFYSIHNCDK---------HPE  200 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa~----~~-~v~~~V~~Ss~~~~~---------~~~  200 (399)
                        .+|++||+||......           ..++|+.++..+.+++.    +. +-..++.+|+.....         ...
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~  164 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  164 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccc
Confidence              6899999998433222           23578888777665543    22 334666666654321         234


Q ss_pred             CcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          201 VPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       201 ~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      ..|..+|...+.+.+       ..|+++..|.||.+..+..........+..  ...-+-.  -+...+|+|.+++.++.
T Consensus       165 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~pl~--R~g~pedvA~~v~fL~S  240 (260)
T d1h5qa_         165 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQ--ASNIPLN--RFAQPEEMTGQAILLLS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHH--HHTCTTS--SCBCGGGGHHHHHHHHS
T ss_pred             cchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHH--HhcCCCC--CCcCHHHHHHHHHHHhc
Confidence            579999999997753       478999999999887554433221111110  0000111  25677999999999986


Q ss_pred             CCc--cCCcEEEEcCCC
Q 015872          274 NEK--INGRTLTFSGPR  288 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~  288 (399)
                      +..  ..|+++.+.||.
T Consensus       241 ~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         241 DHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             GGGTTCCSCEEEECTTG
T ss_pred             chhCCCcCceEEECCCe
Confidence            543  478999999985

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.71  E-value=4.9e-17  Score=145.50  Aligned_cols=203  Identities=16%  Similarity=0.153  Sum_probs=143.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .|.+|||||++.||.++++.|+++|++|.+.+|+.++..   +.+...  .+..+++|++|++++.++++       ++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999754322   222222  47889999999988877663       689


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHHHH------cCCcEEEEecccCCC--CCCCCcHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA------MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~------~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E  211 (399)
                      ++||+||.....           ...++|+.++..+.+++..      .+-.++|++||....  ......|+.+|..++
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            999999943222           2236899999998887753      344589999887543  234467999999999


Q ss_pred             HHHH-------hCCCCEEEEecCcccccccccchhhhccc-----c----ccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          212 QFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE-----K----SVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       212 ~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      .+.+       ..|+++..|.||.+-.++...+.......     .    .+...-+-.  -+...+|+|++++.++.+.
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg--R~~~pedia~~v~fL~S~~  239 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG--RYVQPSEVAEMVAYLIGPG  239 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS--SCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCch
Confidence            8764       36799999999988654433221111000     0    000000111  3677899999999999653


Q ss_pred             --ccCCcEEEEcCC
Q 015872          276 --KINGRTLTFSGP  287 (399)
Q Consensus       276 --~~~g~~~~l~~~  287 (399)
                        ...|+++.+.||
T Consensus       240 s~~itG~~i~vDGG  253 (257)
T d2rhca1         240 AAAVTAQALNVCGG  253 (257)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCcCceEEECcC
Confidence              346899999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.71  E-value=4e-17  Score=145.66  Aligned_cols=206  Identities=14%  Similarity=0.082  Sum_probs=143.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc--c----ccCCcEEEEccCC-CCCcHHHHh------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--L----RDWGATVVNADLS-KPETIPATL------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~--l----~~~~v~~~~~Dl~-d~~~l~~~~------  146 (399)
                      +++.|+|+||||++.||..++++|+++|++|+++.|+.++....  +    ...++.++.+|++ +.+++.+++      
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999876553211  1    1225788999998 444455444      


Q ss_pred             -cCCCEEEECCCCCCCCcc---hhccHHHHHHHHHHHHHc-------CCcEEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 015872          147 -VGVHTVIDCATGRPEEPI---KKVDWEGKVALIQCAKAM-------GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (399)
Q Consensus       147 -~~~d~Vi~~a~~~~~~~~---~~~n~~~~~~l~~aa~~~-------~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~  213 (399)
                       .++|++||+||....+.+   .++|+.|+.++..++...       ...++|++||.....  .....|+.+|.....+
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~  161 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF  161 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence             369999999996555444   468999888877766432       124799999887642  3345799999999876


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEEEcC
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLTFSG  286 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~l~~  286 (399)
                      .+       ..|+++..|.||.+..++...+-. .......+... .........+++|++++.++++.. .|+++.+.+
T Consensus       162 t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdg  238 (254)
T d1sbya1         162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WLDVEPRVAEL-LLSHPTQTSEQCGQNFVKAIEANK-NGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GGGSCTTHHHH-HTTSCCEEHHHHHHHHHHHHHHCC-TTCEEEEET
T ss_pred             HHHHHhhccccCeEEEEEEeCCCcCcccccccc-chhHHHHHHhc-cccCCCCCHHHHHHHHHHhhhCCC-CCCEEEECC
Confidence            53       478999999999987654332110 00000000000 011135578999999999887764 788999988


Q ss_pred             CC
Q 015872          287 PR  288 (399)
Q Consensus       287 ~~  288 (399)
                      |.
T Consensus       239 G~  240 (254)
T d1sbya1         239 GT  240 (254)
T ss_dssp             TE
T ss_pred             CE
Confidence            74

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.71  E-value=6.7e-17  Score=143.26  Aligned_cols=201  Identities=14%  Similarity=0.119  Sum_probs=140.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----cc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      +-|+||||++.||.+++++|+++|++|.+.+++..+..+.+    ..  .++..+++|++|++++.++++       ++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            35899999999999999999999999998876544322222    21  246789999999988877653       689


Q ss_pred             EEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 015872          151 TVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (399)
Q Consensus       151 ~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~  213 (399)
                      ++||+||.....           ...++|+.++..+.+++    ++.+-.++|++||...  .......|+.+|..++.+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            999999943322           22357888877766655    4445569999999764  334557899999999987


Q ss_pred             HH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc---cCCcEEE
Q 015872          214 LQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK---INGRTLT  283 (399)
Q Consensus       214 l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~---~~g~~~~  283 (399)
                      .+       ..|+++..|.||.+..++...+.....+.  +...- ..+ -+...+|+|++++.++..+.   ..|+++.
T Consensus       162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~--~~~~~-pl~-R~~~p~dvA~~v~fLa~S~~a~~itG~~i~  237 (244)
T d1edoa_         162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK--ILGTI-PLG-RTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHH--HHTSC-TTC-SCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             hHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHH--HHhcC-CCC-CCcCHHHHHHHHHHHHCCchhcCCcCCeEE
Confidence            63       47899999999988755443322211110  00000 111 36678999999998864332   4789999


Q ss_pred             EcCCC
Q 015872          284 FSGPR  288 (399)
Q Consensus       284 l~~~~  288 (399)
                      +.||-
T Consensus       238 vdGG~  242 (244)
T d1edoa_         238 IDGGI  242 (244)
T ss_dssp             ESTTT
T ss_pred             eCCCe
Confidence            98873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.3e-16  Score=141.45  Aligned_cols=207  Identities=11%  Similarity=0.055  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh---cCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~---~~~d~Vi~~a~  157 (399)
                      .+.|+++||||++.||+.+++.|+++|++|++.+|++++..+..+..+++...+|+.+.+.++...   .++|++||++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            567899999999999999999999999999999998655444445568889999998876655544   47999999999


Q ss_pred             CCCCCcc-----------hhccHHHHHHHHHHHH----HcCCcEEEEecccCCC---CCCCCcHHHHHHHHHHHHH----
Q 015872          158 GRPEEPI-----------KKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       158 ~~~~~~~-----------~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~---~~~~~~y~~~K~~~E~~l~----  215 (399)
                      ......+           +++|+.++..+.+++.    +.+-.++|++||....   ......|+.+|...+.+.+    
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~  163 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence            4433222           2467777776665553    4455689999876442   2334679999999998764    


Q ss_pred             ---hCCCCEEEEecCcccccccccchhhhcccc---ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCC
Q 015872          216 ---DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       216 ---~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~  287 (399)
                         ..|+++..|.||.+..+.............   ..+...-..+ -+...+|+|+++..++.++.  ..|+++.+.||
T Consensus       164 e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~-R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG  242 (245)
T d2ag5a1         164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG-RFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (245)
T ss_dssp             HHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS-SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHhChhhCCCcCceEEeCCC
Confidence               378999999999886544332211110000   0011111111 36788999999999997643  47899999987


Q ss_pred             C
Q 015872          288 R  288 (399)
Q Consensus       288 ~  288 (399)
                      .
T Consensus       243 ~  243 (245)
T d2ag5a1         243 W  243 (245)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.70  E-value=5.4e-16  Score=136.60  Aligned_cols=201  Identities=15%  Similarity=0.163  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC-CcHHHHhcCCCEEEECCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ++.|+++||||++.||+++++.|+++|++|.+.+|+.+    .++..+.+++.+|+++. +.+.+.+..+|++||+||..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~----~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE----LLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            35789999999999999999999999999999999743    34455778899999864 33455556899999999833


Q ss_pred             CCCc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-------
Q 015872          160 PEEP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-------  215 (399)
Q Consensus       160 ~~~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-------  215 (399)
                      ....           ..++|+.++..+.+++    ++.+-.++|++||.....  .....|..+|..++.+.+       
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela  157 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA  157 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhc
Confidence            2221           2347777766655554    455656899999876533  334568899999987653       


Q ss_pred             hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 ~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                      ..|+++..|.||.+...............  .+...-..+ -+...+|+|.+++.++.+..  ..|+++.+.||-
T Consensus       158 ~~gIrVN~I~PG~v~T~~~~~~~~~~~~~--~~~~~~pl~-R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         158 PYGITVNCVAPGWTETERVKELLSEEKKK--QVESQIPMR-RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTEEEEEEEECSBCCTTHHHHSCHHHHH--HHHTTSTTS-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCeEEeecccCccchhhhhhhcCHHHHH--HHHhcCCCC-CCcCHHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence            36899999999988755433222111110  000000111 36778999999999886533  468999998874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.69  E-value=3.2e-16  Score=141.35  Aligned_cols=207  Identities=14%  Similarity=0.109  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc----ccc--CCcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~----l~~--~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +++.|+++||||++.||.++++.|+++|++|++.+|+..+..+.    +..  ..+..+++|++|++++.+.++      
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            47789999999999999999999999999999999875443222    222  247889999999988776653      


Q ss_pred             -CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCC---CCCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC---DKHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~---~~~~~~~y~~~K~~~  210 (399)
                       ++|++||+++.....           ...++|+.++..+.+++...=  -.++++++|...   .......|+.+|..+
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal  174 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI  174 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence             689999999843222           223578888888888876542  236777766532   223335699999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcccccc----------cc-CCCCcceeceeHHHHHHHHHHHH
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSV----------WG-TDALTRIAYMDTQDIARLTFVAL  272 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~v~v~Dva~~i~~~l  272 (399)
                      +.+.+       ..|+++..|.||.+..+....+..........          .. .-+-.  -+...+|+|.+++.++
T Consensus       175 ~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--R~~~peevA~~v~fL~  252 (272)
T d1g0oa_         175 ETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR--RVGLPIDIARVVCFLA  252 (272)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC--SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC--CCcCHHHHHHHHHHHh
Confidence            98764       37899999999998765543332221111100          00 00111  3678899999999999


Q ss_pred             hCCc--cCCcEEEEcCCC
Q 015872          273 RNEK--INGRTLTFSGPR  288 (399)
Q Consensus       273 ~~~~--~~g~~~~l~~~~  288 (399)
                      .+..  ..|+++.+.||.
T Consensus       253 s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         253 SNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CchhcCccCceEeECCCC
Confidence            7543  478999999884

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.69  E-value=7.4e-17  Score=142.76  Aligned_cols=205  Identities=19%  Similarity=0.181  Sum_probs=143.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC--CcEEEEccCCCCCcHHHHhc-------CCCE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVHT  151 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~~d~  151 (399)
                      .+.|+++||||++.||..+++.|+++|++|++.+|+.++..+.....  ++.++++|++|++++.++++       ++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            45789999999999999999999999999999999865444333333  46789999999988876653       6899


Q ss_pred             EEECCCCCCC-----------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCCCC-CCCcHHHHHHHHHHHHH--
Q 015872          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDKH-PEVPLMEIKYCTEQFLQ--  215 (399)
Q Consensus       152 Vi~~a~~~~~-----------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~-~~~~y~~~K~~~E~~l~--  215 (399)
                      +||+|+....           ...+++|+.+...+.+++...-  -+.++++|+.+.... ....|+.+|..+|.+.+  
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~l  162 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL  162 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHHHHHH
Confidence            9999983221           1223578888888888775543  235566666554332 23569999999998764  


Q ss_pred             -----hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCC
Q 015872          216 -----DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPR  288 (399)
Q Consensus       216 -----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~  288 (399)
                           ..|+++..+.||.+-.+..........+.  ....-+..  .+...+|+|++++.++.+..  ..|+++.+.||.
T Consensus       163 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~--~~~~~p~~--r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         163 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQ--EVGASPLG--RAGRPEEVAQAALFLLSEESAYITGQALYVDGGR  238 (241)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHH--HHHTSTTC--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHH--HHhCCCCC--CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence                 36899999999988655433222111110  00000111  36678999999999997533  478999999985


Q ss_pred             C
Q 015872          289 A  289 (399)
Q Consensus       289 ~  289 (399)
                      .
T Consensus       239 s  239 (241)
T d2a4ka1         239 S  239 (241)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.69  E-value=2.1e-17  Score=148.03  Aligned_cols=205  Identities=16%  Similarity=0.174  Sum_probs=142.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-------C
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.++..   +.+...  ++..+++|++|++++.++++       .
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999754322   122222  57889999999988776653       6


Q ss_pred             CCEEEECCCCCCC-Cc-----------chhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          149 VHTVIDCATGRPE-EP-----------IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       149 ~d~Vi~~a~~~~~-~~-----------~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      +|++||+||.... ..           .+++|+.++..+.+++    ++.+-.++|++||....  .....+|+.+|..+
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal  162 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI  162 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHH
Confidence            8999999984321 11           2257888877766655    33455699999997643  23345799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccc--c------------ccccCCCCcceeceeHHHHHHHHH
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEE--K------------SVWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      +.+.+       ..|+++..|.||.+..++...........  .            .+...-+-.  -+...+|+|.+++
T Consensus       163 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--R~g~pedvA~~v~  240 (260)
T d1zema1         163 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR--RYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS--SCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            98763       36899999999998765433221111000  0            000000111  2567799999999


Q ss_pred             HHHhCCc--cCCcEEEEcCC
Q 015872          270 VALRNEK--INGRTLTFSGP  287 (399)
Q Consensus       270 ~~l~~~~--~~g~~~~l~~~  287 (399)
                      .++.+..  ..|+++.+.||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            9997533  46889988775

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.68  E-value=8.1e-17  Score=144.65  Aligned_cols=206  Identities=17%  Similarity=0.126  Sum_probs=135.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---cccc-----CCcEEEEccCCCCCcHHHHhc----
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLV----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~-----~~v~~~~~Dl~d~~~l~~~~~----  147 (399)
                      ..+.|.++||||++.||.+++++|+++|++|.+.+|+.++..+   .+..     .++..+++|++|++++.++++    
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999997543221   1211     247899999999988877663    


Q ss_pred             ---CCCEEEECCCCCC------------CC---cchhccHHHHHHHHHHHH----HcCCcEEEEecc-cC-CCCCCC-Cc
Q 015872          148 ---GVHTVIDCATGRP------------EE---PIKKVDWEGKVALIQCAK----AMGIQKYVFYSI-HN-CDKHPE-VP  202 (399)
Q Consensus       148 ---~~d~Vi~~a~~~~------------~~---~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss-~~-~~~~~~-~~  202 (399)
                         ++|++||+||...            .+   ...++|+.+...+.+++.    +.+- .+|+++| .+ ....+. ..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-cceeeeeeccccccCCCchh
Confidence               6899999998321            11   123578888877666654    3333 5555554 43 233333 55


Q ss_pred             HHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccc------ccc-CCCCcceeceeHHHHHHHH
Q 015872          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKS------VWG-TDALTRIAYMDTQDIARLT  268 (399)
Q Consensus       203 y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~v~v~Dva~~i  268 (399)
                      |+.+|...+.+.+       ..|+++..|.||.+..++.......-.....      .+. .-+..  -+...+|+|+++
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--R~g~pedvA~~v  238 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--VMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--SCBCHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            9999999997763       3789999999998875443222111000000      000 00111  256779999999


Q ss_pred             HHHHhCC---ccCCcEEEEcCCC
Q 015872          269 FVALRNE---KINGRTLTFSGPR  288 (399)
Q Consensus       269 ~~~l~~~---~~~g~~~~l~~~~  288 (399)
                      +.++.++   -..|+++.+.||.
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTG
T ss_pred             HHHhCCcccCCccCceEEeCCCh
Confidence            9988543   2478999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.68  E-value=1.9e-16  Score=141.77  Aligned_cols=208  Identities=17%  Similarity=0.147  Sum_probs=142.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc----ccccC--CcEEEEccCCCCCcHHHHhc------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRDW--GATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~----~l~~~--~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      +...|+||||||++.||.++++.|+++|++|.+.+|+..+..+    .+...  ++..+++|++|++++.+.++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999988776444322    22222  57889999999988877664      


Q ss_pred             -CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHHHHcC--CcEEEEeccc-CCC--CCCCCcHHHHHHHH
Q 015872          148 -GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCAKAMG--IQKYVFYSIH-NCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~-~~~--~~~~~~y~~~K~~~  210 (399)
                       ++|++||+||......           ..++|+.+...+++++..+-  -.+++.++|. +..  ......|..+|...
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al  162 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAV  162 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHH
Confidence             6899999999433222           23578888888877776542  1255555543 322  23445799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhcccc----------ccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK----------SVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                      +.+.+       ..|+++..|.||++..++............          ..+...-..+ -+...+|||++++.++.
T Consensus       163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-R~g~p~eVa~~v~fL~S  241 (259)
T d1ja9a_         163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK-RIGYPADIGRAVSALCQ  241 (259)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS-SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC-CCcCHHHHHHHHHHHhC
Confidence            88764       368999999999987554332211111000          0000000111 36788999999999997


Q ss_pred             CCc--cCCcEEEEcCCC
Q 015872          274 NEK--INGRTLTFSGPR  288 (399)
Q Consensus       274 ~~~--~~g~~~~l~~~~  288 (399)
                      +..  ..|+++.+.||.
T Consensus       242 ~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         242 EESEWINGQVIKLTGGG  258 (259)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             chhcCCcCceEEeCCCC
Confidence            654  478999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.66  E-value=2.7e-16  Score=141.71  Aligned_cols=209  Identities=12%  Similarity=0.115  Sum_probs=139.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---ccccc-----CCcEEEEccCCCCCcHHHHhc-----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD-----WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~-----~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.++..   +.+..     ..+..+++|++|++++.++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999854322   12222     247889999999988776663     


Q ss_pred             --CCCEEEECCCCCCC---------------CcchhccHHHHHHHHHHHHH----cCCcEEEEecccCC-CCC-CCCcHH
Q 015872          148 --GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC-DKH-PEVPLM  204 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~---------------~~~~~~n~~~~~~l~~aa~~----~~v~~~V~~Ss~~~-~~~-~~~~y~  204 (399)
                        ++|++||+||....               ....++|+.++..+.+++..    .+-..++++|+.+. ... ....|+
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~  162 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA  162 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHH
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhh
Confidence              68999999983221               11125788888777766543    33334445554432 233 345699


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhh--ccc----cccccCCCCcceeceeHHHHHHHHHHH
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPI--LEE----KSVWGTDALTRIAYMDTQDIARLTFVA  271 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~v~v~Dva~~i~~~  271 (399)
                      .+|..++.+.+       ..|+++..|.||.+-.++.......-  ...    ...+...-..+ -+...+|+|++++.+
T Consensus       163 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-R~g~pediA~~v~fL  241 (272)
T d1xkqa_         163 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG-AAGKPEHIANIILFL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS-SCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC-CCcCHHHHHHHHHHH
Confidence            99999997753       47899999999988755433221110  000    00000000111 366789999999999


Q ss_pred             HhCC--c-cCCcEEEEcCCCCC
Q 015872          272 LRNE--K-INGRTLTFSGPRAW  290 (399)
Q Consensus       272 l~~~--~-~~g~~~~l~~~~~~  290 (399)
                      +.++  . ..|+++.+.||..+
T Consensus       242 ~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         242 ADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGG
T ss_pred             hCcchhCCccCeEEEeCcCHHH
Confidence            8542  2 47999999998543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=1.6e-16  Score=142.19  Aligned_cols=205  Identities=16%  Similarity=0.132  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCcccc----c-cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R-DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~-~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      +++.|+++||||+|  .||.+++++|+++|++|.+.+|+. +..+..    . ......+++|++|++++.++++     
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcH-HHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            46679999999998  799999999999999999888863 221111    1 1257789999999988877653     


Q ss_pred             --CCCEEEECCCCCCC------------C---cchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 --GVHTVIDCATGRPE------------E---PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~------------~---~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                        ++|++||+|+..+.            +   ...++|+.+...+.+++...-  -.++|++||....  ......|..+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  163 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIA  163 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHH
Confidence              68999999983221            0   123567777777777665431  1379999987653  3345679999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccch--hhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc-
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYA--VPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK-  276 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~-  276 (399)
                      |..++.+.+       ..|+++..+.||.+.........  ....+.  +...-+-.  -+...+|+|++++.++.+.. 
T Consensus       164 Kaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~--~~~~~pl~--R~~~pedvA~~v~fL~S~~s~  239 (256)
T d1ulua_         164 KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDR--VAQTAPLR--RNITQEEVGNLGLFLLSPLAS  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHH--HHHHSTTS--SCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHH--HHhcCCCC--CCcCHHHHHHHHHHHhCchhC
Confidence            999998764       37899999999988654322211  001000  00000111  25677999999999987643 


Q ss_pred             -cCCcEEEEcCCCC
Q 015872          277 -INGRTLTFSGPRA  289 (399)
Q Consensus       277 -~~g~~~~l~~~~~  289 (399)
                       ..|+++.+.||..
T Consensus       240 ~itG~~i~VDGG~~  253 (256)
T d1ulua_         240 GITGEVVYVDAGYH  253 (256)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CccCCeEEECcCEe
Confidence             4789999998753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.66  E-value=4.3e-16  Score=140.66  Aligned_cols=206  Identities=14%  Similarity=0.138  Sum_probs=138.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHhc-------CCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~~d  150 (399)
                      .++.|+|+||||++.||.++++.|+++|++|.+.+|+.++..+....  .++..+.+|++|++++.++++       .+|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            35678999999999999999999999999999999985443322222  257889999999988776653       689


Q ss_pred             EEEECCCCCC---------C-------CcchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          151 TVIDCATGRP---------E-------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       151 ~Vi~~a~~~~---------~-------~~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                      ++||+||...         .       +..+++|+.++..+.+++    ++.+ .++|++||....  ......|+.+|.
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKa  160 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKH  160 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHH
Confidence            9999998321         1       122457888877766555    4444 477877776433  223456999999


Q ss_pred             HHHHHHHh------CCCCEEEEecCcccccccccchhhhcc----ccc---cccCCCCcceeceeHHHHHHHHHHHHhC-
Q 015872          209 CTEQFLQD------SGLPHVIIRLCGFMQGLIGQYAVPILE----EKS---VWGTDALTRIAYMDTQDIARLTFVALRN-  274 (399)
Q Consensus       209 ~~E~~l~~------~g~~~~ilRp~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~v~v~Dva~~i~~~l~~-  274 (399)
                      .++.+.+.      .++++..|.||.+..++..........    ...   .+...-... -+...+|+|.+++.++.. 
T Consensus       161 al~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-R~g~peeva~~v~fL~S~~  239 (276)
T d1bdba_         161 AIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG-RMPEVEEYTGAYVFFATRG  239 (276)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS-SCCCGGGGSHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC-CCcCHHHHHHHHHHHcCCc
Confidence            99877632      359999999998875543322111110    000   000000111 255679999999988742 


Q ss_pred             --CccCCcEEEEcCC
Q 015872          275 --EKINGRTLTFSGP  287 (399)
Q Consensus       275 --~~~~g~~~~l~~~  287 (399)
                        .-..|+++++.||
T Consensus       240 ~a~~itG~~i~VDGG  254 (276)
T d1bdba_         240 DAAPATGALLNYDGG  254 (276)
T ss_dssp             HHTTCSSCEEEESSS
T ss_pred             ccCCeeCcEEEECcC
Confidence              2357999999887

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.66  E-value=7.1e-16  Score=140.74  Aligned_cols=208  Identities=13%  Similarity=0.093  Sum_probs=136.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccc---cc---cCCcEEEEccCCCCCcHHHHh-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATL-------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~---l~---~~~v~~~~~Dl~d~~~l~~~~-------  146 (399)
                      +.+.|+++||||+|.||.+++++|+++|++|++.+|+..+..+.   +.   ...+..+++|++|.+++.+++       
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            56679999999999999999999999999999999985432221   11   135778999999998876655       


Q ss_pred             cCCCEEEECCCCCCCCcc-----------hhccHHHHHHHHHHH----HH-cCCcEEEEecccCC--CCCCCCcHHHHHH
Q 015872          147 VGVHTVIDCATGRPEEPI-----------KKVDWEGKVALIQCA----KA-MGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~~~~-----------~~~n~~~~~~l~~aa----~~-~~v~~~V~~Ss~~~--~~~~~~~y~~~K~  208 (399)
                      .++|++||+||......+           ..+|+.+...+...+    .. .+...++.+|+...  ......+|+.+|.
T Consensus       102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKa  181 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKA  181 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHH
Confidence            368999999994433222           234555544443332    22 23346677776543  2334456999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCC
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--ING  279 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g  279 (399)
                      ..+.+.+       ..|+++..|.||.+..+.........-....-+...-..+ -+...+|+|.++..++.+..  ..|
T Consensus       182 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~-R~~~pediA~~v~fL~sd~s~~itG  260 (294)
T d1w6ua_         182 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG-RLGTVEELANLAAFLCSDYASWING  260 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS-SCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC-CCCCHHHHHHHHHHHhCchhcCCCC
Confidence            9998764       3789999999998875443222111000000000000111 36678999999999997643  479


Q ss_pred             cEEEEcCCC
Q 015872          280 RTLTFSGPR  288 (399)
Q Consensus       280 ~~~~l~~~~  288 (399)
                      +++.+.||.
T Consensus       261 ~~i~vDGG~  269 (294)
T d1w6ua_         261 AVIKFDGGE  269 (294)
T ss_dssp             CEEEESTTH
T ss_pred             cEEEECCCh
Confidence            999999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=1.6e-16  Score=143.47  Aligned_cols=209  Identities=15%  Similarity=0.160  Sum_probs=141.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc---ccccc-----CCcEEEEccCCCCCcHHHHhc-----
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD-----WGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~---~~l~~-----~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      .+.|+++||||++.||.++++.|+++|++|.+.+|+.++..   +.+..     .++..+.+|++|++++.++++     
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999754322   11222     246889999999988777653     


Q ss_pred             --CCCEEEECCCCCC----------CC---cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCC-C-CCCCcHHHH
Q 015872          148 --GVHTVIDCATGRP----------EE---PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD-K-HPEVPLMEI  206 (399)
Q Consensus       148 --~~d~Vi~~a~~~~----------~~---~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~-~-~~~~~y~~~  206 (399)
                        .+|++||+||...          .+   ...++|+.++..+.+++.    +.+-.+++++||.... . .....|..+
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as  161 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA  161 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence              6899999998321          11   123578888776666553    4455578888876543 2 234569999


Q ss_pred             HHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc---cccc-CCCCcce-eceeHHHHHHHHHHHHhC
Q 015872          207 KYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWG-TDALTRI-AYMDTQDIARLTFVALRN  274 (399)
Q Consensus       207 K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~-~~v~v~Dva~~i~~~l~~  274 (399)
                      |..++.+.+       ..|+++..|.||.+..++............   .... .....++ -+...+|+|.+++.++..
T Consensus       162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~  241 (274)
T d1xhla_         162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR  241 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred             hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence            999998763       378999999999987554332211000000   0000 0001111 256789999999998853


Q ss_pred             ---CccCCcEEEEcCCCC
Q 015872          275 ---EKINGRTLTFSGPRA  289 (399)
Q Consensus       275 ---~~~~g~~~~l~~~~~  289 (399)
                         .-..|+++.+.||..
T Consensus       242 d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         242 NLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHTTCCSCEEEESTTGG
T ss_pred             ccccCccCcEEEeCcCHH
Confidence               224799999999854

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.65  E-value=6.6e-16  Score=136.41  Aligned_cols=179  Identities=13%  Similarity=0.065  Sum_probs=129.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCc-------EEEEecCCCCCc---cccccC--CcEEEEccCCCCCcHHHHhc-----
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYD-------VRCLVRPRPAPA---DFLRDW--GATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~-------V~~~~r~~~~~~---~~l~~~--~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      -||||||++.||.++++.|+++|++       |.+.+|+.++..   ..+...  .+..+.+|++|++++.++++     
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3799999999999999999999987       888888754322   122223  36788999999988776653     


Q ss_pred             --CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHH
Q 015872          148 --GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~  208 (399)
                        .+|++||+||.....           ..+++|+.++..+.+++    ++.+-.++|++||....  ......|..+|.
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~  162 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKF  162 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHH
Confidence              689999999943322           22357888877765555    45555699999987653  234467999999


Q ss_pred             HHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          209 CTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       209 ~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      .++.+.+       ..|+++..+.||.+..++......             +.+-.+...+|+|++++.++.++.
T Consensus       163 al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~-------------~~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         163 GQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------------EMQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------------TTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH-------------hhHhcCCCHHHHHHHHHHHHcCCc
Confidence            9987653       478999999999887554322110             111135667999999999998754

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=4.9e-15  Score=135.11  Aligned_cols=213  Identities=13%  Similarity=0.059  Sum_probs=148.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCc-----cccc------cCCcEEEEccCCCCCcHHHHh--
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-----DFLR------DWGATVVNADLSKPETIPATL--  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~-----~~l~------~~~v~~~~~Dl~d~~~l~~~~--  146 (399)
                      ..+.|+++||||++.||+.+++.|+++|++|.+.+|+.+...     ..+.      ........+|+.|.+++.+.+  
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            456789999999999999999999999999999998744221     0010      013456788999988776554  


Q ss_pred             -----cCCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCC--CCCCCCcHH
Q 015872          147 -----VGVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLM  204 (399)
Q Consensus       147 -----~~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~--~~~~~~~y~  204 (399)
                           .++|++||+||.....           ..+++|+.++..+.+++    ++.+-.+||++||...  .......|+
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~  163 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  163 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence                 3699999999943222           22358888887766665    4556669999999764  334457899


Q ss_pred             HHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC-c
Q 015872          205 EIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE-K  276 (399)
Q Consensus       205 ~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~-~  276 (399)
                      .+|..++.+.+       ..|+++..|.||.+..........              ....++..+|+|.+++.++.+. .
T Consensus       164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~--------------~~~~~~~PedvA~~v~fL~S~~a~  229 (302)
T d1gz6a_         164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE--------------DLVEALKPEYVAPLVLWLCHESCE  229 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH--------------HHHHHSCGGGTHHHHHHHTSTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH--------------hhHhcCCHHHHHHHHHHHcCCCcC
Confidence            99999998763       378999999998664321111100              1113445699999999988542 2


Q ss_pred             cCCcEEEEcCC-------------------CCCCHHHHHHHHHHHhCCC
Q 015872          277 INGRTLTFSGP-------------------RAWTTQEVITLCERLAGQD  306 (399)
Q Consensus       277 ~~g~~~~l~~~-------------------~~~s~~e~~~~~~~~~g~~  306 (399)
                      ..|+++.+.||                   +.+|.+++++.+.++....
T Consensus       230 itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         230 ENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             CCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             CCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            35777666543                   3468888888888877644

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.64  E-value=1.8e-16  Score=141.28  Aligned_cols=201  Identities=12%  Similarity=0.058  Sum_probs=138.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-------CCCEEEECCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVIDCAT  157 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vi~~a~  157 (399)
                      +++||||++.||..+++.|+++|++|.+.+|+.+.. +.+.......+++|++|.+++.++++       ++|++||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~-~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK-DELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH-HHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            589999999999999999999999999999974443 33333334456789999888776653       6899999998


Q ss_pred             CCC-CCc--------c---hhccHHHHHHHHHHH----HHcCCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH----
Q 015872          158 GRP-EEP--------I---KKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ----  215 (399)
Q Consensus       158 ~~~-~~~--------~---~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~----  215 (399)
                      ... ...        |   .++|+.++..+.+++    ++.+-.++|++||.....  .....|..+|..++.+.+    
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  160 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK  160 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHH
Confidence            322 111        1   246777766655554    455556999999987643  223579999999998763    


Q ss_pred             ---hCCCCEEEEecCcccccccccchhhh-cccc-----ccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          216 ---DSGLPHVIIRLCGFMQGLIGQYAVPI-LEEK-----SVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       216 ---~~g~~~~ilRp~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                         ..|+++..|.||.+.......+.... ....     .+...-+-.  -+...+|+|.+++.++.+..  ..|+++.+
T Consensus       161 ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~--R~g~pedvA~~v~fL~S~~s~~iTG~~i~v  238 (252)
T d1zmta1         161 ELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ--RLGTQKELGELVAFLASGSCDYLTGQVFWL  238 (252)
T ss_dssp             HHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS--SCBCHHHHHHHHHHHHTTSCGGGTTCEEEE
T ss_pred             HhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCchhcCCcCCeEEE
Confidence               37899999999988754433221100 0000     000000111  26678999999999997643  47899999


Q ss_pred             cCCC
Q 015872          285 SGPR  288 (399)
Q Consensus       285 ~~~~  288 (399)
                      .||-
T Consensus       239 dGG~  242 (252)
T d1zmta1         239 AGGF  242 (252)
T ss_dssp             STTC
T ss_pred             CCCc
Confidence            9874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.6e-16  Score=137.58  Aligned_cols=183  Identities=11%  Similarity=0.041  Sum_probs=131.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC--CcEEEEccCCCCCcHHHHhc-------
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW--GATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      +...|.|+||||++.||.+++++|+++|++|.+.+|+.++..+   .+...  ++..+.+|++|++++.++++       
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3557889999999999999999999999999999998543221   12222  57889999999988877653       


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCCCC--CCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH--PEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~~~--~~~~y~~~K~~~  210 (399)
                      ++|++||+||.....           ..+++|+.|...+.+++    ++.+-.++|++||......  ....|..+|...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  163 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  163 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHH
Confidence            689999999933221           23357888877765544    5556679999999876432  235699999999


Q ss_pred             HHHHHh----------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQD----------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~~----------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+.          .|+.++.+.||.+-.++......              .....+..+|+|+.++..+..+.
T Consensus       164 ~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~--------------~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST--------------SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH--------------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc--------------cccCCCCHHHHHHHHHHHHhcCC
Confidence            876521          47999999998875543321100              01134567999999999887754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.1e-15  Score=133.44  Aligned_cols=196  Identities=16%  Similarity=0.136  Sum_probs=132.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccC----CcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDW----GATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~----~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      .+.|.+|||||++.||.++++.|+++|++|++.+|+.++..+   .+...    .+.++++|++|++++.++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999999998543222   22222    46788999999988776653      


Q ss_pred             -CCCEEEECCCCCCCCc-----------chhccHHHHHHHHHHH----HHcC--CcEEEEecccCCCC-CC---CCcHHH
Q 015872          148 -GVHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCA----KAMG--IQKYVFYSIHNCDK-HP---EVPLME  205 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~-----------~~~~n~~~~~~l~~aa----~~~~--v~~~V~~Ss~~~~~-~~---~~~y~~  205 (399)
                       ++|++||+||......           ..++|+.+...+.+++    ++.+  -.++|++||..... .|   ...|+.
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~  167 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  167 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence             6999999999433222           2346777776655544    4444  35899999976532 22   245999


Q ss_pred             HHHHHHHHHH---------hCCCCEEEEecCcccccccccchhhhcccc-ccccCCCCcceeceeHHHHHHHHHHHHhCC
Q 015872          206 IKYCTEQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-SVWGTDALTRIAYMDTQDIARLTFVALRNE  275 (399)
Q Consensus       206 ~K~~~E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~  275 (399)
                      +|..++.+.+         ..++++..+.||.+-............+.. ...   +.  ..++..+|+|++++.++.++
T Consensus       168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~---~~--~r~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY---EQ--MKCLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH---C-----CBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC---CC--CCCcCHHHHHHHHHHHhCCh
Confidence            9999987652         367999999998776443322211110000 000   01  14678899999999999775


Q ss_pred             c--cCCcE
Q 015872          276 K--INGRT  281 (399)
Q Consensus       276 ~--~~g~~  281 (399)
                      .  ..|++
T Consensus       243 a~~itG~i  250 (257)
T d1xg5a_         243 AHIQIGDI  250 (257)
T ss_dssp             TTEEEEEE
T ss_pred             hcCeECCE
Confidence            3  24554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.9e-15  Score=134.87  Aligned_cols=202  Identities=14%  Similarity=0.138  Sum_probs=130.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEec---CCCCCcc------ccc--cCCcEEEEccCCCCCcHHHHhc-----
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR---PRPAPAD------FLR--DWGATVVNADLSKPETIPATLV-----  147 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r---~~~~~~~------~l~--~~~v~~~~~Dl~d~~~l~~~~~-----  147 (399)
                      |-|+||||++.||.++++.|+++|.+|+.+.+   +.+....      .+.  ..++..+.+|++|++++.++++     
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            55789999999999999999999988665543   3221111      111  1257889999999999887764     


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHH----HHcCCcEEEEecccCCC--CCCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~~--~~~~~~y~~~K~~~  210 (399)
                      .+|++||++|.....           ..+++|+.|+.++.+++    ++.+-.++|++||....  .....+|+.+|..+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal  162 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL  162 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHH
Confidence            489999999833221           22358888877766654    55566799999998653  33345799999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhh---hccccc------cc---cCCCCc-ceeceeHHHHHHHHHH
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVP---ILEEKS------VW---GTDALT-RIAYMDTQDIARLTFV  270 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~---~~~~~~------~~---~~~~~~-~~~~v~v~Dva~~i~~  270 (399)
                      +.+.+       ..|+++..+.||.+-.++.......   ......      ..   ....+. .......+|+|++++.
T Consensus       163 ~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~  242 (285)
T d1jtva_         163 EGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLT  242 (285)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHH
Confidence            97753       4799999999998876554332211   000000      00   000000 0124567999999999


Q ss_pred             HHhCCccCCcEEEEcCC
Q 015872          271 ALRNEKINGRTLTFSGP  287 (399)
Q Consensus       271 ~l~~~~~~g~~~~l~~~  287 (399)
                      +++.+.+  +...+.+.
T Consensus       243 ~~~~~~p--~~ry~~g~  257 (285)
T d1jtva_         243 ALRAPKP--TLRYFTTE  257 (285)
T ss_dssp             HHHCSSC--CSEEESCS
T ss_pred             HHhCCCC--CeEEecHH
Confidence            9988654  33445553

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.60  E-value=5.4e-15  Score=131.32  Aligned_cols=150  Identities=14%  Similarity=0.102  Sum_probs=110.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcHHHHhc-------
Q 015872           83 PTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~~-------  147 (399)
                      ||+||||||++.||..+++.|++   +|++|++.+|+.++... +.     ..++.++++|++|++++.++++       
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            57899999999999999999974   69999999998665432 21     2368999999999998876543       


Q ss_pred             --CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHH----Hc-----------CCcEEEEecccCCC--
Q 015872          148 --GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAK----AM-----------GIQKYVFYSIHNCD--  196 (399)
Q Consensus       148 --~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~----~~-----------~v~~~V~~Ss~~~~--  196 (399)
                        .+|++||+||....            +...++|+.++..+.+++.    +.           +-.++|++||....  
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence              48999999983211            1123578888777666542    21           23589999986532  


Q ss_pred             ---CCCCCcHHHHHHHHHHHH-------HhCCCCEEEEecCcccccc
Q 015872          197 ---KHPEVPLMEIKYCTEQFL-------QDSGLPHVIIRLCGFMQGL  233 (399)
Q Consensus       197 ---~~~~~~y~~~K~~~E~~l-------~~~g~~~~ilRp~~~~~~~  233 (399)
                         ......|..+|.....+.       .+.|+++..+.||.+-.++
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence               112346999999998765       3478999999999886554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.60  E-value=7.2e-15  Score=131.40  Aligned_cols=186  Identities=17%  Similarity=0.243  Sum_probs=132.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCC---cc---ccccC--CcEEEEccCCCCCcHHHHhc------C
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAP---AD---FLRDW--GATVVNADLSKPETIPATLV------G  148 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~---~~---~l~~~--~v~~~~~Dl~d~~~l~~~~~------~  148 (399)
                      .+|+||||+|.||..++++|+++|++ |+++.|+..+.   .+   .+...  .+.++.+|++|++++.++++      .
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            57999999999999999999999985 77788863221   11   12222  47889999999998888775      3


Q ss_pred             CCEEEECCCCCCCCcc-----------hhccHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCCCcHHHHHHHHHHHH-
Q 015872          149 VHTVIDCATGRPEEPI-----------KKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL-  214 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~~~-----------~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~E~~l-  214 (399)
                      +|.|||++|......+           .++|+.+..++.+++...+..+||++||...  .......|..+|...+.+. 
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~  169 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQ  169 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHH
Confidence            7899999994332222           3578999999999888888889999998754  3344567999999998765 


Q ss_pred             --HhCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCcc
Q 015872          215 --QDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKI  277 (399)
Q Consensus       215 --~~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~  277 (399)
                        +..|++++.|.||.+.+..+..   ......  +.   ...+..+..+++++++..++..+..
T Consensus       170 ~~~~~Gi~v~~I~pg~~~~~g~~~---~~~~~~--~~---~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         170 QRRSDGLPATAVAWGTWAGSGMAE---GPVADR--FR---RHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHTTCCCEEEEECCBC-----------------CT---TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHhCCCCEEECCCCcccCCcccc---chHHHH--HH---hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence              4589999999999876543211   111100  00   1113567889999999999987654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.5e-15  Score=132.61  Aligned_cols=202  Identities=14%  Similarity=0.131  Sum_probs=136.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--CCcEEEEccCCCCCcHHHHh-------cCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~-------~~~d  150 (399)
                      +.+.|.++||||++.||.+++++|+++|++|++++|+.++.....++  .....+..|+.+.+.+....       ...|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            45678999999999999999999999999999999986654443333  25677888998876554443       3578


Q ss_pred             EEEECCCCC---------C--------CCcchhccHHHHHHHHHHHHHc----------CCcEEEEecccCCC--CCCCC
Q 015872          151 TVIDCATGR---------P--------EEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNCD--KHPEV  201 (399)
Q Consensus       151 ~Vi~~a~~~---------~--------~~~~~~~n~~~~~~l~~aa~~~----------~v~~~V~~Ss~~~~--~~~~~  201 (399)
                      .++++++..         +        .....++|+.++..+.+++...          +-.++|++||....  .....
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            888876511         0        1122357888888888877543          22379999998653  33456


Q ss_pred             cHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhC
Q 015872          202 PLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRN  274 (399)
Q Consensus       202 ~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~  274 (399)
                      .|+.+|...+.+.+       ..|+++..|.||.+.......+.......  +...-+... -+...+|+|++++.++++
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~--~~~~~pl~~-R~g~peevA~~v~fL~s~  238 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNF--LASQVPFPS-RLGDPAEYAHLVQAIIEN  238 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CH--HHHTCSSSC-SCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHH--HHhcCCCCC-CCcCHHHHHHHHHHHHhC
Confidence            79999999998764       37899999999988755443322211110  000000001 256789999999999886


Q ss_pred             CccCCcEEEE
Q 015872          275 EKINGRTLTF  284 (399)
Q Consensus       275 ~~~~g~~~~l  284 (399)
                      +-..|+++++
T Consensus       239 ~~itGq~I~v  248 (248)
T d2o23a1         239 PFLNGEVIRL  248 (248)
T ss_dssp             TTCCSCEEEE
T ss_pred             CCCCceEeEC
Confidence            6556777764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.58  E-value=7.2e-15  Score=130.69  Aligned_cols=185  Identities=16%  Similarity=0.137  Sum_probs=124.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCccc--cccCCcEEEEccCCCCCcHHHHhc---------
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF--LRDWGATVVNADLSKPETIPATLV---------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~--l~~~~v~~~~~Dl~d~~~l~~~~~---------  147 (399)
                      |++|+||||||++.||.+++++|+++|+  .|++..|+.++..+.  ....++.++++|++|.+++.++++         
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            5568999999999999999999999995  688888885543321  122368999999999988766652         


Q ss_pred             CCCEEEECCCCCCC------------CcchhccHHHHHHHHHHHH----Hc-----------CCcEEEEecccCCC----
Q 015872          148 GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAK----AM-----------GIQKYVFYSIHNCD----  196 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~------------~~~~~~n~~~~~~l~~aa~----~~-----------~v~~~V~~Ss~~~~----  196 (399)
                      ++|++||+||....            +...++|+.|+..+.+++.    +.           ...+++.+|+....    
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            38999999993211            1233588888877766653    21           11367777764321    


Q ss_pred             -----CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHH
Q 015872          197 -----KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       197 -----~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  264 (399)
                           ..+...|..+|.....+.+       ..|+++..+.||++-.++...                   ...+..++.
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-------------------~~~~~~e~~  221 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALTVEQS  221 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-------------------CCCCCHHHH
Confidence                 2223459999999987653       478999999999886543210                   023456888


Q ss_pred             HHHHHHHHhCC--ccCCcEEEE
Q 015872          265 ARLTFVALRNE--KINGRTLTF  284 (399)
Q Consensus       265 a~~i~~~l~~~--~~~g~~~~l  284 (399)
                      ++.++..+...  ...|+.|+.
T Consensus       222 a~~~~~~~~~~~~~~sG~f~~~  243 (250)
T d1yo6a1         222 TAELISSFNKLDNSHNGRFFMR  243 (250)
T ss_dssp             HHHHHHHHTTCCGGGTTCEEET
T ss_pred             HHHHHHHHhcCCCCCCeEEECC
Confidence            98888888753  345777764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=6.8e-15  Score=131.56  Aligned_cols=203  Identities=12%  Similarity=0.062  Sum_probs=137.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCCCCCccc---cc----cCCcEEEEccCCCCCcHHHHhc--
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV--  147 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~~~~~~~---l~----~~~v~~~~~Dl~d~~~l~~~~~--  147 (399)
                      .+..|.++||||++.||..++++|++   +|++|++.+|+.++..+.   +.    ...+..+++|++|++++.++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35568899999999999999999986   799999999985433221   11    1246789999999988877652  


Q ss_pred             ---------CCCEEEECCCCC---CC-----------CcchhccHHHHHHHHHHHHHc----C--CcEEEEecccCCCC-
Q 015872          148 ---------GVHTVIDCATGR---PE-----------EPIKKVDWEGKVALIQCAKAM----G--IQKYVFYSIHNCDK-  197 (399)
Q Consensus       148 ---------~~d~Vi~~a~~~---~~-----------~~~~~~n~~~~~~l~~aa~~~----~--v~~~V~~Ss~~~~~-  197 (399)
                               ..|++||+||..   +.           ....++|+.++..+.+++...    +  -.++|++||..... 
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     357899998832   11           112458999999988888654    1  23899999876532 


Q ss_pred             -CCCCcHHHHHHHHHHHHH-----hCCCCEEEEecCcccccccccchhhhcccc---ccccCCCCcceeceeHHHHHHHH
Q 015872          198 -HPEVPLMEIKYCTEQFLQ-----DSGLPHVIIRLCGFMQGLIGQYAVPILEEK---SVWGTDALTRIAYMDTQDIARLT  268 (399)
Q Consensus       198 -~~~~~y~~~K~~~E~~l~-----~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~v~Dva~~i  268 (399)
                       .....|+.+|..++.+.+     ..|+++..|.||.+..++............   .+.......  .+...+|+|+++
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG--ALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTT--CSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCC--CCCCHHHHHHHH
Confidence             334679999999997763     378999999999887654332211100000   000000011  356789999999


Q ss_pred             HHHHhCCc-cCCcEEEE
Q 015872          269 FVALRNEK-INGRTLTF  284 (399)
Q Consensus       269 ~~~l~~~~-~~g~~~~l  284 (399)
                      +.++.+.. ..|+.+++
T Consensus       241 ~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         241 LGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHCCSCTTEEEET
T ss_pred             HHHhhhccCCCCCeEEe
Confidence            99987643 35666664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.54  E-value=1.3e-14  Score=127.70  Aligned_cols=185  Identities=14%  Similarity=0.069  Sum_probs=126.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHH-------Hhc--CCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA-------TLV--GVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~-------~~~--~~d~Vi  153 (399)
                      .|+|+||||+|.||.++++.|+++|++|.++++...+...     ....+..|..+.++...       .+.  ++|++|
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            5899999999999999999999999999999987543221     12233445444333322       222  489999


Q ss_pred             ECCCCCC------C---C---cchhccHHHHHHHHHHHHHc--CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHHh-
Q 015872          154 DCATGRP------E---E---PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQD-  216 (399)
Q Consensus       154 ~~a~~~~------~---~---~~~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~-  216 (399)
                      |+||...      .   +   ..+++|+.++.++..++..+  +-.++|++||.....  .....|+.+|..++.+.+. 
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  156 (236)
T d1dhra_          77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL  156 (236)
T ss_dssp             ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHH
Confidence            9998311      1   1   12357888888877777653  124899999986532  3345799999999988742 


Q ss_pred             --------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEE
Q 015872          217 --------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTF  284 (399)
Q Consensus       217 --------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l  284 (399)
                              .|+++..+.||.+...+....    ..       ..+.. .++..+|+|+.+..++....  ..|..+.+
T Consensus       157 a~El~~~~~gI~vn~v~PG~v~T~~~~~~----~~-------~~~~~-~~~~pe~va~~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         157 AGKNSGMPSGAAAIAVLPVTLDTPMNRKS----MP-------EADFS-SWTPLEFLVETFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             TSTTSSCCTTCEEEEEEESCEECHHHHHH----ST-------TSCGG-GSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             HHHhccCCCcEEEEEEEeccCcCCcchhh----Cc-------cchhh-cCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence                    479999999998875543211    11       11222 57788999999999987643  35666655

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.53  E-value=1.3e-14  Score=127.66  Aligned_cols=185  Identities=14%  Similarity=0.099  Sum_probs=124.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHH-------HHh--cCCCEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP-------ATL--VGVHTVID  154 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~-------~~~--~~~d~Vi~  154 (399)
                      .||+||||+|.||.+++++|+++|++|++++|+..+...     ....+.+|..+.+...       ..+  ..+|++||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            579999999999999999999999999999998554322     2233456665443322       222  34899999


Q ss_pred             CCCCCC------C------CcchhccHHHHHHHHHHHHHcC--CcEEEEecccCCC--CCCCCcHHHHHHHHHHHHHh--
Q 015872          155 CATGRP------E------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD--  216 (399)
Q Consensus       155 ~a~~~~------~------~~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~--~~~~~~y~~~K~~~E~~l~~--  216 (399)
                      +||...      .      +..+++|+.++..+++++...-  -.++|++||....  .....+|+.+|..++.+.+.  
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la  157 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA  157 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHH
Confidence            998311      0      1123578888877777776541  2489999987643  22346799999999988642  


Q ss_pred             -------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc---cCCcEEEEc
Q 015872          217 -------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK---INGRTLTFS  285 (399)
Q Consensus       217 -------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~---~~g~~~~l~  285 (399)
                             .++++..+.||.+........    ..+       .+.. .++..+|+++.++..+..+.   ..|..+.+.
T Consensus       158 ~e~~~~~~~i~v~~i~Pg~~~T~~~~~~----~~~-------~~~~-~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~  224 (235)
T d1ooea_         158 AKDSGLPDNSAVLTIMPVTLDTPMNRKW----MPN-------ADHS-SWTPLSFISEHLLKWTTETSSRPSSGALLKIT  224 (235)
T ss_dssp             STTSSCCTTCEEEEEEESCBCCHHHHHH----STT-------CCGG-GCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             HHhccCCCceEEEEEecCcCcCcchhhh----CcC-------Cccc-cCCCHHHHHHHHHHHhcCccccCCCceEEEEE
Confidence                   356788899988765433221    111       1222 57788999999987776532   357777763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.53  E-value=4.6e-14  Score=124.50  Aligned_cols=196  Identities=17%  Similarity=0.145  Sum_probs=133.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc------CCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~------~~d~Vi~~a~  157 (399)
                      |+++||||++.||+++++.|+++|++|.+.+|+.+.       .+...+++|+.+......+..      ..+.+++.++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   74 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence            789999999999999999999999999999997543       245678899988766555442      3455555554


Q ss_pred             CC-------C--------CCcchhccHHHHHHHHHHHHHc----------CCcEEEEecccCC--CCCCCCcHHHHHHHH
Q 015872          158 GR-------P--------EEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (399)
Q Consensus       158 ~~-------~--------~~~~~~~n~~~~~~l~~aa~~~----------~v~~~V~~Ss~~~--~~~~~~~y~~~K~~~  210 (399)
                      ..       .        .....++|+.+...+...+...          +-.++|++||...  .......|+.+|..+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  154 (241)
T d1uaya_          75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV  154 (241)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHH
Confidence            10       0        1122356777776666555332          2348999999764  334557899999999


Q ss_pred             HHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCccCCcEEE
Q 015872          211 EQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEKINGRTLT  283 (399)
Q Consensus       211 E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~~~g~~~~  283 (399)
                      +.+.+       ..|+++..|.||.+...............  .....+... -+...+|+|.+++.++.+.-..|+++.
T Consensus       155 ~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~--~~~~~~~~~-R~g~pedvA~~v~fL~s~~~iTG~~i~  231 (241)
T d1uaya_         155 VALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKAS--LAAQVPFPP-RLGRPEEYAALVLHILENPMLNGEVVR  231 (241)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHH--HHTTCCSSC-SCCCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHH--HHhcCCCCC-CCcCHHHHHHHHHHHHhCCCCCCCEEE
Confidence            98764       37899999999998755443322211110  000000101 255789999999999987656799999


Q ss_pred             EcCCCC
Q 015872          284 FSGPRA  289 (399)
Q Consensus       284 l~~~~~  289 (399)
                      +.||-.
T Consensus       232 VDGG~~  237 (241)
T d1uaya_         232 LDGALR  237 (241)
T ss_dssp             ESTTCC
T ss_pred             ECCccc
Confidence            988743

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=5.3e-14  Score=125.53  Aligned_cols=206  Identities=11%  Similarity=0.067  Sum_probs=135.1

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCcccc----cc-CCcEEEEccCCCCCcHHHHhc------
Q 015872           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RD-WGATVVNADLSKPETIPATLV------  147 (399)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~-~~v~~~~~Dl~d~~~l~~~~~------  147 (399)
                      ++.|+||||||+|  .||.++++.|+++|++|++.+|+.. ..+.+    .. .....+..|+.+.+++...+.      
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            4578999999999  7999999999999999999999743 22211    11 246778889988776655542      


Q ss_pred             -CCCEEEECCCCCCCCcc----------------hhccHHHHHHHHHHHHHc--CCcEEEEecccCCC--CCCCCcHHHH
Q 015872          148 -GVHTVIDCATGRPEEPI----------------KKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (399)
Q Consensus       148 -~~d~Vi~~a~~~~~~~~----------------~~~n~~~~~~l~~aa~~~--~v~~~V~~Ss~~~~--~~~~~~y~~~  206 (399)
                       ..|++||+++.......                ..+|+.+...+..++...  +-+.+|++||.+..  ......|..+
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~s  161 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  161 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHH
Confidence             57999999973221111                123444555555555432  12368888887543  2334679999


Q ss_pred             HHHHHHHHHh-------CCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCC--cc
Q 015872          207 KYCTEQFLQD-------SGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KI  277 (399)
Q Consensus       207 K~~~E~~l~~-------~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~  277 (399)
                      |...+.+.+.       .|+++..|+||.+...........-.........-+-.  -+...+|+|.+++.++.+.  ..
T Consensus       162 Kaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~peeia~~v~fL~s~~s~~i  239 (258)
T d1qsga_         162 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR--RTVTIEDVGNSAAFLCSDLSAGI  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--SCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC--CCcCHHHHHHHHHHHhCchhcCc
Confidence            9999987643       68999999999987554332211100000000000111  2667899999999999653  35


Q ss_pred             CCcEEEEcCCCC
Q 015872          278 NGRTLTFSGPRA  289 (399)
Q Consensus       278 ~g~~~~l~~~~~  289 (399)
                      .|+++.+.||..
T Consensus       240 tG~~i~vDGG~~  251 (258)
T d1qsga_         240 SGEVVHVDGGFS  251 (258)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCceEEECcCHH
Confidence            789999999853

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.48  E-value=2.4e-13  Score=122.91  Aligned_cols=201  Identities=13%  Similarity=0.032  Sum_probs=128.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-------cCCcE-----------------EEEccCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGAT-----------------VVNADLSKP  139 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-------~~~v~-----------------~~~~Dl~d~  139 (399)
                      +-++||||++.||.++++.|+++|++|.+.+|+..+..+.+.       .....                 .+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            457999999999999999999999999998886433221111       11223                 344557776


Q ss_pred             CcHHHHh-------cCCCEEEECCCCCCCCc-------------------------chhccHHHHHHHHHHHHHc-----
Q 015872          140 ETIPATL-------VGVHTVIDCATGRPEEP-------------------------IKKVDWEGKVALIQCAKAM-----  182 (399)
Q Consensus       140 ~~l~~~~-------~~~d~Vi~~a~~~~~~~-------------------------~~~~n~~~~~~l~~aa~~~-----  182 (399)
                      +++.+++       .++|++||+||......                         ++.+|+.+...+.+++.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            6666654       47999999999332111                         2345666666666654321     


Q ss_pred             -----CCcEEEEecccCCCC--CCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCccc--ccccccchhhhccccc
Q 015872          183 -----GIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFM--QGLIGQYAVPILEEKS  246 (399)
Q Consensus       183 -----~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~--~~~~~~~~~~~~~~~~  246 (399)
                           +...+|.+++.....  .....|..+|..++.+.+       ..|+++..|.||.+.  ...............+
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~p  242 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVP  242 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTCT
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcCC
Confidence                 223678887766432  334679999999998764       378999999998632  1111111111111111


Q ss_pred             cccCCCCcceeceeHHHHHHHHHHHHhCCc--cCCcEEEEcCCCCCC
Q 015872          247 VWGTDALTRIAYMDTQDIARLTFVALRNEK--INGRTLTFSGPRAWT  291 (399)
Q Consensus       247 ~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~~g~~~~l~~~~~~s  291 (399)
                      .     ..  -+...+|+|++++.++.+..  ..|+++.+.||..++
T Consensus       243 l-----~~--R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         243 L-----YQ--RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             T-----TT--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             C-----CC--CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            0     11  25678999999999986543  478999999986544

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.2e-13  Score=124.44  Aligned_cols=172  Identities=15%  Similarity=0.043  Sum_probs=122.9

Q ss_pred             CCeE-EEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCc---ccccc--CCcEEEEccCCCCCcHHHHhc-------C
Q 015872           83 PTSI-LVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPA---DFLRD--WGATVVNADLSKPETIPATLV-------G  148 (399)
Q Consensus        83 ~~~v-lVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~---~~l~~--~~v~~~~~Dl~d~~~l~~~~~-------~  148 (399)
                      .|+| +||||++.||..++++|+++ |++|++.+|+.++..   +.++.  .++.++++|++|.+++.++++       .
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            3556 89999999999999999986 899999999865432   22222  258899999999988776653       6


Q ss_pred             CCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHHHcC--CcEEEEecccCC--------------------
Q 015872          149 VHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--------------------  195 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~--------------------  195 (399)
                      +|++||+||.....           ..+++|+.|+..+.+++...=  -.++|++||...                    
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            89999999932211           134589999999888875431  138999998521                    


Q ss_pred             -----------------------CCCCCCcHHHHHHHHHHHHH--------h---CCCCEEEEecCcccccccccchhhh
Q 015872          196 -----------------------DKHPEVPLMEIKYCTEQFLQ--------D---SGLPHVIIRLCGFMQGLIGQYAVPI  241 (399)
Q Consensus       196 -----------------------~~~~~~~y~~~K~~~E~~l~--------~---~g~~~~ilRp~~~~~~~~~~~~~~~  241 (399)
                                             ...+...|..+|.....+.+        +   .++.+..+.||++..++....    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~----  237 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK----  237 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT----
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc----
Confidence                                   12234569999998875431        1   489999999998875542211    


Q ss_pred             ccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          242 LEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                                     ...+.+|.|+.++.+..
T Consensus       238 ---------------~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         238 ---------------ATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             ---------------CSBCHHHHTHHHHHHHS
T ss_pred             ---------------ccCCHHHHHHHHHHHHc
Confidence                           12246899998888764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.47  E-value=2.5e-13  Score=122.21  Aligned_cols=204  Identities=10%  Similarity=0.040  Sum_probs=129.7

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCccccc-----cCCcEEEEccCCCCCcHHHHh-------
Q 015872           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------  146 (399)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-----~~~v~~~~~Dl~d~~~l~~~~-------  146 (399)
                      ++.|++|||||+|  .||.++++.|+++|++|++.+|+. +..+.+.     .....++++|+++.+++.+++       
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            4678999999987  799999999999999999999983 3222221     124678899999987766665       


Q ss_pred             cCCCEEEECCCCCCC----Ccchhc-----------cHHHHHHHHHHHHHc-CCc-EEEEecccCC--CCCCCCcHHHHH
Q 015872          147 VGVHTVIDCATGRPE----EPIKKV-----------DWEGKVALIQCAKAM-GIQ-KYVFYSIHNC--DKHPEVPLMEIK  207 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~----~~~~~~-----------n~~~~~~l~~aa~~~-~v~-~~V~~Ss~~~--~~~~~~~y~~~K  207 (399)
                      ..+|++||+++..+.    ......           +............+. +-. .++.+|+.+.  .......|+.+|
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK  161 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK  161 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHH
Confidence            368999999983321    111111           111122222222221 222 3555555543  233446799999


Q ss_pred             HHHHHHHH-------hCCCCEEEEecCcccccccccchh-hhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc--c
Q 015872          208 YCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAV-PILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK--I  277 (399)
Q Consensus       208 ~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~--~  277 (399)
                      ..++.+.+       ..|+++..+.||.+.......... ...... ..... ..+ .+...+|+|.+++.++.+..  .
T Consensus       162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~-~~~~~-p~~-r~~~pedIA~~v~fL~S~~s~~i  238 (274)
T d2pd4a1         162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKW-NEINA-PLR-KNVSLEEVGNAGMYLLSSLSSGV  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHH-HHHHS-TTS-SCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHH-Hhhhh-hcc-CCcCHHHHHHHHHHHhChhhCCC
Confidence            99988764       378999999999887544322211 000000 00000 111 36778999999999997643  4


Q ss_pred             CCcEEEEcCCC
Q 015872          278 NGRTLTFSGPR  288 (399)
Q Consensus       278 ~g~~~~l~~~~  288 (399)
                      .|+++.+.||.
T Consensus       239 tG~~i~vDGG~  249 (274)
T d2pd4a1         239 SGEVHFVDAGY  249 (274)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCceEEECCCh
Confidence            78999999985

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.7e-13  Score=120.68  Aligned_cols=183  Identities=11%  Similarity=0.070  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc------cCCcEEEEccCCCCCcHHHHh-------c
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATL-------V  147 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~------~~~v~~~~~Dl~d~~~l~~~~-------~  147 (399)
                      ++.|+++||||++.||.++++.|+++|++|++++|+.++..+...      ...+..+.+|+.+.+.....+       .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            567899999999999999999999999999999998544322211      124667888988866554433       3


Q ss_pred             CCCEEEECCCCCCCC-----------cchhccHHHHHHHHHHHH----HcCCcEEEEecccCCCC--CCCCcHHHHHHHH
Q 015872          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--HPEVPLMEIKYCT  210 (399)
Q Consensus       148 ~~d~Vi~~a~~~~~~-----------~~~~~n~~~~~~l~~aa~----~~~v~~~V~~Ss~~~~~--~~~~~y~~~K~~~  210 (399)
                      ..|+++++||.....           ...++|+.++..+..++.    +.+ .++|++||.....  .....|+.+|...
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCCCCCchHHHHHHHHH
Confidence            689999999832221           123577777766655553    333 4889998876532  2346899999999


Q ss_pred             HHHHH---------hCCCCEEEEecCcccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHhCCc
Q 015872          211 EQFLQ---------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALRNEK  276 (399)
Q Consensus       211 E~~l~---------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~~  276 (399)
                      +.+.+         ..++++..+.||.+-.++...    ...+.        ........+++|+.++..+...+
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~----~~~~~--------~~~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK----AVSGI--------VHMQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH----HSCGG--------GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH----hccCC--------ccccCCCHHHHHHHHHHHhhcCC
Confidence            87652         246888999999886543221    11111        11134556899999888776543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.42  E-value=4.4e-13  Score=120.09  Aligned_cols=210  Identities=13%  Similarity=0.076  Sum_probs=129.0

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCCCCcccccc---CCcEEEEccCCCCCcHHHHh--------
Q 015872           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---WGATVVNADLSKPETIPATL--------  146 (399)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~---~~v~~~~~Dl~d~~~l~~~~--------  146 (399)
                      -++.|+|+||||+|  .||.+++++|+++|++|++..|+..+..+.+.+   .....+++|+.+++++.+++        
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            35679999999765  599999999999999999999986544332222   24778999999986654443        


Q ss_pred             --cCCCEEEECCCCCC-----CCcchh-----------ccHHHHHHHHHHHHHcC-CcEEEEecccCC--CCCCCCcHHH
Q 015872          147 --VGVHTVIDCATGRP-----EEPIKK-----------VDWEGKVALIQCAKAMG-IQKYVFYSIHNC--DKHPEVPLME  205 (399)
Q Consensus       147 --~~~d~Vi~~a~~~~-----~~~~~~-----------~n~~~~~~l~~aa~~~~-v~~~V~~Ss~~~--~~~~~~~y~~  205 (399)
                        ..+|+++|++|..+     ...+.+           +|+........++.... -...+.+++...  .......|+.
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~  162 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTV  162 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhc
Confidence              24699999998432     222222           22222233333333221 123333433332  2233457999


Q ss_pred             HHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhcccc-----c----cccCCCCcceeceeHHHHHHHHH
Q 015872          206 IKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEK-----S----VWGTDALTRIAYMDTQDIARLTF  269 (399)
Q Consensus       206 ~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~v~v~Dva~~i~  269 (399)
                      +|...+.+.+       ..|+++..|.||.+.......+........     .    .+.........+...+|+|++++
T Consensus       163 sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~  242 (268)
T d2h7ma1         163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC  242 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHH
T ss_pred             cccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            9999998764       368999999999887544332221111000     0    00000011113667799999999


Q ss_pred             HHHhCC--ccCCcEEEEcCCCC
Q 015872          270 VALRNE--KINGRTLTFSGPRA  289 (399)
Q Consensus       270 ~~l~~~--~~~g~~~~l~~~~~  289 (399)
                      .++.+.  ...|+++.+.||..
T Consensus       243 fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         243 ALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHhCchhcCccCCEEEECcCcc
Confidence            999653  24789999998854

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.37  E-value=1.1e-11  Score=110.15  Aligned_cols=191  Identities=14%  Similarity=0.135  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh--------cCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--------VGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~--------~~~d~Vi~  154 (399)
                      ||.|+||||++.||.+++++|+++|++|.+++|+..+.            ..|+.+.+......        ..+|++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            46789999999999999999999999999999974432            35666554433222        25899999


Q ss_pred             CCCCCCCCcch----hccHHHHHHHHHHH----HHcCCcEEEEecccCC---------------------------C---
Q 015872          155 CATGRPEEPIK----KVDWEGKVALIQCA----KAMGIQKYVFYSIHNC---------------------------D---  196 (399)
Q Consensus       155 ~a~~~~~~~~~----~~n~~~~~~l~~aa----~~~~v~~~V~~Ss~~~---------------------------~---  196 (399)
                      +|+..+.....    .+|..+...+.+..    .+........+++...                           .   
T Consensus        69 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence            99854433332    34555554444433    3333334444443211                           0   


Q ss_pred             CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCcccccccccchhhhccccccccC-CCCcceeceeHHHHHHHH
Q 015872          197 KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGT-DALTRIAYMDTQDIARLT  268 (399)
Q Consensus       197 ~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~~i  268 (399)
                      .....+|+.+|...+.+.+       ..|+++..|.||.+..+........-.....+... .+..  -+...+|+|.++
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg--R~g~p~eva~~v  226 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG--RRAEPSEMASVI  226 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT--SCCCTHHHHHHH
T ss_pred             CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC--CCcCHHHHHHHH
Confidence            0112359999999998764       47899999999988755443322111000011100 0112  256789999999


Q ss_pred             HHHHhCC--ccCCcEEEEcCC
Q 015872          269 FVALRNE--KINGRTLTFSGP  287 (399)
Q Consensus       269 ~~~l~~~--~~~g~~~~l~~~  287 (399)
                      +.++.+.  ...|+++.+.||
T Consensus       227 ~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         227 AFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhCCccCceEEeCCC
Confidence            9998653  357899999887

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.36  E-value=1.2e-11  Score=110.40  Aligned_cols=199  Identities=15%  Similarity=0.092  Sum_probs=123.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-------cCCcEEEEccCCCCCcHH----H-------Hh
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIP----A-------TL  146 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-------~~~v~~~~~Dl~d~~~l~----~-------~~  146 (399)
                      .++||||++.||..++++|+++|++|++.+|+.++..+.+.       ......++.|..+..+..    +       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999998654322221       124566777776543322    2       23


Q ss_pred             cCCCEEEECCCCCCCCcc----------------------hhccHHHHHHHHHHHHHc---------CCcEEEEecccCC
Q 015872          147 VGVHTVIDCATGRPEEPI----------------------KKVDWEGKVALIQCAKAM---------GIQKYVFYSIHNC  195 (399)
Q Consensus       147 ~~~d~Vi~~a~~~~~~~~----------------------~~~n~~~~~~l~~aa~~~---------~v~~~V~~Ss~~~  195 (399)
                      .++|++||+||...+..+                      ...|+.+...........         ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            469999999994322111                      012222222222222221         1225666666544


Q ss_pred             C--CCCCCcHHHHHHHHHHHHH-------hCCCCEEEEecCccccccc-cc-chhhhccccccccCCCCcceeceeHHHH
Q 015872          196 D--KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLCGFMQGLI-GQ-YAVPILEEKSVWGTDALTRIAYMDTQDI  264 (399)
Q Consensus       196 ~--~~~~~~y~~~K~~~E~~l~-------~~g~~~~ilRp~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  264 (399)
                      .  ......|..+|..++.+.+       ..|+++..|.||.+..... .. ....+...  +    +-.+ -+...+|+
T Consensus       163 ~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~--~----pl~r-~~~~peev  235 (266)
T d1mxha_         163 DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRK--V----PLGQ-SEASAAQI  235 (266)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTT--C----TTTS-CCBCHHHH
T ss_pred             cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhc--C----CCCC-CCCCHHHH
Confidence            3  2344679999999998753       3789999999998763211 11 11111111  1    0111 24577999


Q ss_pred             HHHHHHHHhCCc--cCCcEEEEcCCCCC
Q 015872          265 ARLTFVALRNEK--INGRTLTFSGPRAW  290 (399)
Q Consensus       265 a~~i~~~l~~~~--~~g~~~~l~~~~~~  290 (399)
                      |.+++.++.+..  ..|+++.+.||-.+
T Consensus       236 a~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         236 ADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCchhCCccCCeEEECccHhh
Confidence            999999997643  47899999998543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.30  E-value=7.3e-12  Score=113.72  Aligned_cols=207  Identities=9%  Similarity=0.053  Sum_probs=126.7

Q ss_pred             CCCCCCCeEEEEcCCC--hhHHHHHHHHHHCCCcEEEEecCCC------------CCcccccc----CCc-EEEEcc--C
Q 015872           78 GTPVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP------------APADFLRD----WGA-TVVNAD--L  136 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG--~iG~~lv~~L~~~g~~V~~~~r~~~------------~~~~~l~~----~~v-~~~~~D--l  136 (399)
                      .++++.|++|||||+|  .||..+++.|+++|.+|.+.+|+..            ........    .+. .....|  +
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            3467789999999987  8999999999999999999988421            00000000    011 122222  1


Q ss_pred             ------------------CCCCcHHHH-------hcCCCEEEECCCCCC--CCc-----------chhccHHHHHHHHHH
Q 015872          137 ------------------SKPETIPAT-------LVGVHTVIDCATGRP--EEP-----------IKKVDWEGKVALIQC  178 (399)
Q Consensus       137 ------------------~d~~~l~~~-------~~~~d~Vi~~a~~~~--~~~-----------~~~~n~~~~~~l~~a  178 (399)
                                        .+.+.+.++       +.++|++||+||...  ...           ..++|+.+...+..+
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                              233333333       347899999998422  111           124677777777777


Q ss_pred             HHHcCCc--EEEEecccCC---CCCCCCcHHHHHHHHHHHH--------HhCCCCEEEEecCcccccccccch--hhhcc
Q 015872          179 AKAMGIQ--KYVFYSIHNC---DKHPEVPLMEIKYCTEQFL--------QDSGLPHVIIRLCGFMQGLIGQYA--VPILE  243 (399)
Q Consensus       179 a~~~~v~--~~V~~Ss~~~---~~~~~~~y~~~K~~~E~~l--------~~~g~~~~ilRp~~~~~~~~~~~~--~~~~~  243 (399)
                      +.....+  ..+.+++.+.   .......|..+|...+.+.        .+.|+++..|.||.+.........  ....+
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~  242 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE  242 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHH
T ss_pred             HHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHH
Confidence            6654322  3444444332   3345567999998887654        246899999999998755433211  11111


Q ss_pred             ccccccCCCCcceeceeHHHHHHHHHHHHhCC--ccCCcEEEEcCCC
Q 015872          244 EKSVWGTDALTRIAYMDTQDIARLTFVALRNE--KINGRTLTFSGPR  288 (399)
Q Consensus       244 ~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~~~--~~~g~~~~l~~~~  288 (399)
                      ..  ...-+-.  -+...+|+|.+++.++.+.  ...|+++.+.||.
T Consensus       243 ~~--~~~~Plg--R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         243 YS--YNNAPIQ--KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HH--HHHSSSC--CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HH--HhCCCCC--CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            00  0000111  2567899999999999653  3478999998874

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.10  E-value=1.5e-09  Score=99.48  Aligned_cols=148  Identities=11%  Similarity=0.082  Sum_probs=97.8

Q ss_pred             CCeEEEEc--CCChhHHHHHHHHHHCCCcEEEEecCCCC-----------C-cccccc----CC-cEEE-----------
Q 015872           83 PTSILVVG--ATGTLGRQIVRRALDEGYDVRCLVRPRPA-----------P-ADFLRD----WG-ATVV-----------  132 (399)
Q Consensus        83 ~~~vlVtG--atG~iG~~lv~~L~~~g~~V~~~~r~~~~-----------~-~~~l~~----~~-v~~~-----------  132 (399)
                      .|.+||||  ++..||..+++.|+++|.+|.+..++...           . ...+..    .. ....           
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            46789999  55699999999999999999998774321           0 000000    00 1112           


Q ss_pred             ---------EccCCCCCcHHHHh-------cCCCEEEECCCCCCC--Cc-----------chhccHHHHHHHHHHHHHcC
Q 015872          133 ---------NADLSKPETIPATL-------VGVHTVIDCATGRPE--EP-----------IKKVDWEGKVALIQCAKAMG  183 (399)
Q Consensus       133 ---------~~Dl~d~~~l~~~~-------~~~d~Vi~~a~~~~~--~~-----------~~~~n~~~~~~l~~aa~~~~  183 (399)
                               .+|+.+.+++.+++       .++|++||++|..+.  ..           ..++|+.+...+.+++...-
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                     23666777666554       478999999984321  11           12466667777777765541


Q ss_pred             --CcEEEEecccCCCCC-C--CCcHHHHHHHHHHHHH--------hCCCCEEEEecCccc
Q 015872          184 --IQKYVFYSIHNCDKH-P--EVPLMEIKYCTEQFLQ--------DSGLPHVIIRLCGFM  230 (399)
Q Consensus       184 --v~~~V~~Ss~~~~~~-~--~~~y~~~K~~~E~~l~--------~~g~~~~ilRp~~~~  230 (399)
                        -.++|.+||.+.... |  ...|+.+|..++.+.+        ++|+++..|.||.+-
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence              237888887765432 2  3468999999997653        369999999999774

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.07  E-value=2.9e-11  Score=102.26  Aligned_cols=81  Identities=19%  Similarity=0.235  Sum_probs=68.2

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----ccCCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RDWGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +.+++.|+|+||||+|.||..+++.|+++|++|++++|+.++.....    ...++....+|+.|.+++.+++.++|+||
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            44677899999999999999999999999999999999855432211    11256778999999999999999999999


Q ss_pred             ECCCC
Q 015872          154 DCATG  158 (399)
Q Consensus       154 ~~a~~  158 (399)
                      |++|.
T Consensus        98 n~Ag~  102 (191)
T d1luaa1          98 TAGAI  102 (191)
T ss_dssp             ECCCT
T ss_pred             ecCcc
Confidence            99984

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.76  E-value=8.6e-09  Score=81.19  Aligned_cols=95  Identities=20%  Similarity=0.280  Sum_probs=72.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~  162 (399)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++++++.....-...++.++.||.+|++.+.++ ++.+|+++-+...    
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~----   75 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK----   75 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCc----
Confidence            68999998 99999999999999999999999854333222234889999999999999877 5789999987541    


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEE
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVF  189 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~  189 (399)
                        .+.|    ..+...+++.+++++|-
T Consensus        76 --d~~N----~~~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          76 --EEVN----LMSSLLAKSYGINKTIA   96 (132)
T ss_dssp             --HHHH----HHHHHHHHHTTCCCEEE
T ss_pred             --HHHH----HHHHHHHHHcCCceEEE
Confidence              1122    23455667888887763

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.60  E-value=1.2e-07  Score=74.60  Aligned_cols=96  Identities=15%  Similarity=0.172  Sum_probs=73.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~  162 (399)
                      |++.|+|+ |.+|+++++.|.+.|++|++++.+ ++..+.+...+..++.+|.++++.+.++ +.++|+||-+.+..   
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d-~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~---   75 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN---   75 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-HHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC---
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCc-HHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCch---
Confidence            56899987 999999999999999999999997 4444455667888999999999999877 67899998877521   


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                            -.....+...++..+..+++-.
T Consensus        76 ------~~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          76 ------IQASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             ------HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             ------HHhHHHHHHHHHHcCCCcEEee
Confidence                  1222234455566677666543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.35  E-value=5.4e-07  Score=71.40  Aligned_cols=106  Identities=16%  Similarity=0.139  Sum_probs=72.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc-cccccCC-cEEEEccCCCCCcHHHHhcCCCEEEECCCC--
Q 015872           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCATG--  158 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~-~~l~~~~-v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~--  158 (399)
                      ||.|+||+|.+|++++..|..+|  .++.+++.++.+.. ..+.... ......-+ ...+..+.++++|+||.++|.  
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCCcCC
Confidence            69999999999999999999887  47888887532211 1111111 11111111 245577889999999999992  


Q ss_pred             ---CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          159 ---RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       159 ---~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                         ....+....|....+.+++.+++++.+ .++.+|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence               223455678999999999999999866 444444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=1.6e-05  Score=62.65  Aligned_cols=90  Identities=17%  Similarity=0.211  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC----CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g----~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ||+|.|+||||++|+.+++.|+++.    .+++.+.+++..... .....-.....++.+    ...+.++|+||.+++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~-~~~~~~~~~~~~~~~----~~~~~~~DivF~a~~~   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA-PSFGGTTGTLQDAFD----LEALKALDIIVTCQGG   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC-CGGGTCCCBCEETTC----HHHHHTCSEEEECSCH
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc-ccccCCceeeecccc----hhhhhcCcEEEEecCc
Confidence            4689999999999999999988763    356666665333211 111111111112222    1346899999999861


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                                 .....+...+.+.|.+-+|
T Consensus        76 -----------~~s~~~~~~~~~~g~~~~V   94 (146)
T d1t4ba1          76 -----------DYTNEIYPKLRESGWQGYW   94 (146)
T ss_dssp             -----------HHHHHHHHHHHHTTCCCEE
T ss_pred             -----------hHHHHhhHHHHhcCCCeec
Confidence                       3356677888888875333

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.07  E-value=6e-06  Score=65.35  Aligned_cols=101  Identities=9%  Similarity=0.080  Sum_probs=69.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc---ccc-----ccCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA---DFL-----RDWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~---~~l-----~~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .|||.|+|+ |++|..++..|+.+|  .+|.+++++.....   ..+     .........+|+       +.++++|+|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adiv   76 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADLV   76 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccEE
Confidence            468999996 999999999999987  68999998743211   001     111244555553       246899999


Q ss_pred             EECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       153 i~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      |.++|..     ...+....|....+.+++...+++.+-++.+-
T Consensus        77 vitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivv  120 (146)
T d1ez4a1          77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (146)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe
Confidence            9999832     23345567888899999999999876555444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.07  E-value=1.8e-06  Score=70.88  Aligned_cols=93  Identities=17%  Similarity=0.198  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcE-EEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT-VVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      .|+|+|+|| |++|.++++.|.++||+|++++|+.++........+.. ....+..+.......+...|.++.+...   
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~---   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY---   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCG---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccc---
Confidence            488999997 99999999999999999999999865544333333333 3444555566677778889999987641   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                              ......+..+.+.+. +++
T Consensus        78 --------~~~~~~~~~~~~~~~-~~~   95 (182)
T d1e5qa1          78 --------TFHATVIKSAIRQKK-HVV   95 (182)
T ss_dssp             --------GGHHHHHHHHHHHTC-EEE
T ss_pred             --------hhhhHHHHHHHhhcc-cee
Confidence                    113345566666665 444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=8e-06  Score=64.47  Aligned_cols=106  Identities=17%  Similarity=0.144  Sum_probs=69.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-C--CCcEEEEecCCCCCcc---ccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALD-E--GYDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~-~--g~~V~~~~r~~~~~~~---~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||.|+|++|.+|++++-.|.. .  +.++.+++.. +....   .+.+........-+...++. +.++++|+||.++|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~-~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~aDvvvitaG   78 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA-PVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAG   78 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSS-TTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTCSEEEECCS
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccc-ccchhHHHHHHCCccccCCcEEEcCCCc-cccCCCCEEEECCC
Confidence            6899999999999999988764 3  4789999875 32211   11111111111111222333 47899999999999


Q ss_pred             CC-----CCCcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          158 GR-----PEEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       158 ~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      ..     ...+....|....+.+.+.+.+++.+. +|.+|
T Consensus        79 ~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          79 VRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            32     234555688899999999999987654 55555

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.05  E-value=9.1e-06  Score=64.13  Aligned_cols=103  Identities=13%  Similarity=0.046  Sum_probs=69.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCC-----cccccc------CCcEEEEccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP-----ADFLRD------WGATVVNADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~-----~~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d  150 (399)
                      |||.|+||+|.+|+.++..|+.+|  .++.+++++....     ...+.+      .+++....--.|    .+.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence            589999999999999999999998  5999999863211     011111      123332221112    24678999


Q ss_pred             EEEECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       151 ~Vi~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                      +||-+||...     ..+....|..-.+.+++...+++.+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999999321     223346788888899999988876555544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=3.2e-05  Score=56.02  Aligned_cols=87  Identities=15%  Similarity=0.135  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      .+.|+|+|+|. |..|.++++.|.++|++|++.+.+...........++.++.+...     ...+.++|.||..-|..+
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-----DEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-----HHHHHHCSEEEECTTSCT
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-----hhhhccCCEEEECCCCCC
Confidence            45688999998 999999999999999999999986554333222335556555532     234578899999877433


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCC
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGI  184 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v  184 (399)
                      .           ..++..|++.|+
T Consensus        77 ~-----------~~~~~~a~~~gi   89 (93)
T d2jfga1          77 A-----------HPSLSAAADAGI   89 (93)
T ss_dssp             T-----------SHHHHHHHHTTC
T ss_pred             C-----------CHHHHHHHHcCC
Confidence            2           257788888887

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.78  E-value=0.00011  Score=57.69  Aligned_cols=94  Identities=21%  Similarity=0.211  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      +++|.|+||||++|+.+++.|.+++|   ++..+..+... -+.+....-+...-++.+     ..+.++|++|.+++. 
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~~~~~~~~~~~~~~-----~~~~~~d~vf~a~p~-   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMGFAESSLRVGDVDS-----FDFSSVGLAFFAAAA-   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEEETTEEEECEEGGG-----CCGGGCSEEEECSCH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Ccceeeccccchhccchh-----hhhccceEEEecCCc-
Confidence            47899999999999999999987654   67766544222 222222121222222211     234678999988761 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                                .....+...+.+.|+ ++|=.|+..
T Consensus        75 ----------~~s~~~~~~~~~~g~-~VID~Ss~f   98 (144)
T d2hjsa1          75 ----------EVSRAHAERARAAGC-SVIDLSGAL   98 (144)
T ss_dssp             ----------HHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             ----------chhhhhccccccCCc-eEEeechhh
Confidence                      234556666777776 677666654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=5.6e-05  Score=56.48  Aligned_cols=68  Identities=18%  Similarity=0.319  Sum_probs=56.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      ..||.|+|| |.+|+-++....+.|++|++++.++..+...+   .-+++.+|+.|.+.+.+...  ++|+|-.
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            358999996 99999999999999999999999866655433   34688999999998887764  6899854

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.77  E-value=6.1e-05  Score=59.53  Aligned_cols=101  Identities=14%  Similarity=0.203  Sum_probs=69.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCc---cccc------cCCcEEEEccCCCCCcHHHHhcCCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPA---DFLR------DWGATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~---~~l~------~~~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      .+||.|+|| |++|..++..|+.+|.  ++.+++++++...   ..+.      ...+.+..+|.       +.++++|+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDv   77 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADL   77 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcccee
Confidence            468999997 9999999999999874  8999998643211   0011      11344444443       45789999


Q ss_pred             EEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       152 Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      ||.++|..     ...+....|..-.+.+++...+++.+ .++.+|
T Consensus        78 vvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99999832     22344567888888899999888765 455544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.76  E-value=1.3e-05  Score=63.92  Aligned_cols=106  Identities=16%  Similarity=0.131  Sum_probs=69.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc---cccc----CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD----WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~---~l~~----~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .+.+||.|+|+ |.+|+.++..|...+. ++.+++.++.....   .+.+    .+...   ........+++++++|+|
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~---~~~~~~~~~~~~~~adiV   80 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNV---SVRAEYSYEAALTGADCV   80 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCC---CEEEECSHHHHHTTCSEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCee---EEeccCchhhhhcCCCeE
Confidence            34579999997 9999999988888874 88888876432211   1110    01100   000123356788999999


Q ss_pred             EECCCCC----------CCCcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          153 IDCATGR----------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       153 i~~a~~~----------~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                      +.++|..          ...+....|....+.+++.+.+++.+-++.+
T Consensus        81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivii  128 (154)
T d1pzga1          81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  128 (154)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEE
Confidence            9999821          1233445788888999999999887644443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.73  E-value=1.6e-05  Score=62.56  Aligned_cols=100  Identities=9%  Similarity=0.020  Sum_probs=65.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---ccccC-----CcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~~-----~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      +||.|+|+ |.+|..++-.|+.+|  .++.+++++.+....   .+.+.     ......+|       .+.++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            57999997 999999999999997  489999987654321   11110     11222222       34578999999


Q ss_pred             ECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       154 ~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      .+||...     ..+....|..-.+.+++.+.+++.+- ++.+|
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            9998322     12234578888888999999987653 44444

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=9.2e-06  Score=65.68  Aligned_cols=71  Identities=18%  Similarity=0.250  Sum_probs=47.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc-cCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||+|+|+ |.+|..++..|++.||+|.+++|+......... ..+.......+  .....+.+.++|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESL--TANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEE--EESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccc--ccchhhhhcccceEEEeec
Confidence            68999998 999999999999999999999998654322111 01111111000  1123355678999999875

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=7.3e-05  Score=59.43  Aligned_cols=73  Identities=11%  Similarity=0.151  Sum_probs=59.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC---ccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~---~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~  157 (399)
                      .+|+|+|. |.+|..+++.|.+.|++|++++.+++..   ...+...++.++.||.+|++.|.++ ++.+|+||-+.+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            46999998 9999999999999999999999875432   2223345899999999999988765 467999998865

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.66  E-value=0.0001  Score=56.53  Aligned_cols=72  Identities=19%  Similarity=0.206  Sum_probs=54.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |||.|.|++|..|+.+.+.+.++|+++.+..-.                    ..    .+.+.++|+||++..      
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~--------------------~~----~~~~~~~DVvIDFS~------   50 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDV--------------------NG----VEELDSPDVVIDFSS------   50 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEET--------------------TE----EEECSCCSEEEECSC------
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECC--------------------Cc----HHHhccCCEEEEecC------
Confidence            579999999999999999999999988754321                    00    112457899999964      


Q ss_pred             chhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                           -.++...++.|.++++ .+|.-+
T Consensus        51 -----p~~~~~~l~~~~~~~~-p~ViGT   72 (128)
T d1vm6a3          51 -----PEALPKTVDLCKKYRA-GLVLGT   72 (128)
T ss_dssp             -----GGGHHHHHHHHHHHTC-EEEECC
T ss_pred             -----HHHHHHHHHHHHhcCC-CEEEEc
Confidence                 2568899999999997 555333

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.65  E-value=0.00038  Score=54.43  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=59.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-C---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-Y---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      |||.|+||||++|+.+++.|++.. |   ++..+..+.... +.....+-.....+..|    ...++++|+||.|.+. 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~g-k~~~~~~~~~~~~~~~~----~~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV-PAPNFGKDAGMLHDAFD----IESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSS-BCCCSSSCCCBCEETTC----HHHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccc-cccccCCcceeeecccc----hhhhccccEEEEecCc-
Confidence            579999999999999999998753 3   555554432211 11110000000111111    2446899999999861 


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCc-EEEEecccCCCCCCCCcHH
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDKHPEVPLM  204 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~Ss~~~~~~~~~~y~  204 (399)
                                .-+..+...+.+.|.+ .+|=.|+.. --.+..+|.
T Consensus        75 ----------~~s~~~~~~l~~~g~~~~VIDlSsdf-R~~~dvpl~  109 (147)
T d1mb4a1          75 ----------SYTEKVYPALRQAGWKGYWIDAASTL-RMDKEAIIT  109 (147)
T ss_dssp             ----------HHHHHHHHHHHHTTCCSEEEESSSTT-TTCTTEEEE
T ss_pred             ----------hHHHHHhHHHHHcCCceEEEeCCccc-cccCCceEE
Confidence                      2355677788888875 355455433 223444554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.64  E-value=2.3e-05  Score=64.46  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|||+||+|.+|...++.....|.+|++++++++ ..+.++..+...+ .|..+.+..+.++     .++|+||++.|
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~-~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE-KIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHH-HHHHHHhhhhhhh-cccccccHHHHHHHHhhcCCCceeEEecC
Confidence            468999999999999999999999999999998743 4445566665554 4555555554443     36999999987

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.62  E-value=9.8e-05  Score=57.88  Aligned_cols=101  Identities=17%  Similarity=0.103  Sum_probs=66.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cc------cCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR------DWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~------~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|| |.+|+.++..|+..|  .++.++++++......   +.      ....++...+      ..++++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~------~~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN------DYADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES------CGGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC------CHHHhcCCeEE
Confidence            58999996 999999999999987  6899999875432111   10      1123333221      12457899999


Q ss_pred             EECCCCC--C---CCcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          153 IDCATGR--P---EEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       153 i~~a~~~--~---~~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      |.++|..  +   ..+....|..-.+.+++.+.+++.+- ++.+|
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999832  1   12233567777888888888887553 44443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.62  E-value=0.00029  Score=52.66  Aligned_cols=94  Identities=15%  Similarity=0.140  Sum_probs=68.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ..+.++|+|+|+ |.+|..-++.|++.|.+|++++....+....+ ...+++++..++.+     +.+.+++.|+.+.+.
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~d   82 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATDD   82 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCSC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCCC
Confidence            345789999998 99999999999999999999987644433222 33467888777654     236788999887541


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                                -.-...+.+.|++.|+  +|++.
T Consensus        83 ----------~~~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          83 ----------DTVNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             ----------HHHHHHHHHHHHHTTC--EEEET
T ss_pred             ----------HHHHHHHHHHHHHcCC--EEEeC
Confidence                      1234578889999886  67655

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.61  E-value=0.00019  Score=57.10  Aligned_cols=103  Identities=15%  Similarity=0.090  Sum_probs=69.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCc---ccccc----CC-cEE-EEccCCCCCcHHHHhcCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPA---DFLRD----WG-ATV-VNADLSKPETIPATLVGV  149 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~---~~l~~----~~-v~~-~~~Dl~d~~~l~~~~~~~  149 (399)
                      .+.+||.|+|+ |.+|..++..|+.+|.  ++.+++++.+...   ..+.+    .+ ... ..+|+       +.++++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccc
Confidence            34579999996 9999999999999985  8999998643221   11111    11 111 12222       357899


Q ss_pred             CEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          150 HTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       150 d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |+||.+||..     ...+....|....+.++....+++.+ -++.+|
T Consensus        90 diVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          90 KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999999932     22334457888888889999988765 455555

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.60  E-value=2e-05  Score=63.23  Aligned_cols=73  Identities=23%  Similarity=0.449  Sum_probs=55.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ....++|||+|+ |-+|..+++.|...|. +|.+..|+.++........+.+.+     +.+++.+.+..+|+||.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-----~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-----RFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-----CGGGHHHHHHTCSEEEECCSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-----cchhHHHHhccCCEEEEecCC
Confidence            345789999998 9999999999999997 588888875554444343344432     345688889999999999873

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.59  E-value=2.2e-05  Score=63.92  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..+|+|+||+|-+|...++.+...|.+|+++++++ +..+.+++.+.+.+. |..+...-....+++|+||++.|
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~-~~~~~~~~lGa~~~i-~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP-EKLALPLALGAEEAA-TYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG-GGSHHHHHTTCSEEE-EGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCEEEEEeccccchhhhhhhhcccccccccccccc-cccccccccccceee-ehhhhhhhhhccccccccccccc
Confidence            46899999999999999999999999999999874 444555666765432 43332222223458999999887

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.59  E-value=3.8e-05  Score=60.13  Aligned_cols=99  Identities=17%  Similarity=0.111  Sum_probs=66.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccc---cc-----cCCcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR-----DWGATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~---l~-----~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      |||.|+|+ |.+|+.++..|+.+|  .++.+++++++.....   +.     ........+|       .+.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-------YADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc-------HHHhcCCCEEE
Confidence            68999997 999999999999887  5899999864321100   00     0123333333       23578999999


Q ss_pred             ECCCCCCC-----CcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          154 DCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       154 ~~a~~~~~-----~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                      .++|....     .+....|..-.+.+++...+++.+-++.+
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence            99983221     23345678888889999999876644444

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.57  E-value=0.00011  Score=60.00  Aligned_cols=86  Identities=10%  Similarity=0.047  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCC--------cEEEEccCCCCCcHHHHhcCCCEEEEC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--------ATVVNADLSKPETIPATLVGVHTVIDC  155 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~--------v~~~~~Dl~d~~~l~~~~~~~d~Vi~~  155 (399)
                      |+|.|+|+ |.+|..++..|.++||+|.+++|++.. .+.+...+        .+..........++.++++++|+||.+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR-IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            78999998 999999999999999999999997432 22221111        122222222234578889999999998


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHc
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAM  182 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~  182 (399)
                      ...           .....+++..+.+
T Consensus        80 v~~-----------~~~~~~~~~i~~~   95 (184)
T d1bg6a2          80 VPA-----------IHHASIAANIASY   95 (184)
T ss_dssp             SCG-----------GGHHHHHHHHGGG
T ss_pred             Ech-----------hHHHHHHHHhhhc
Confidence            641           2345666666554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.57  E-value=6.1e-05  Score=58.93  Aligned_cols=100  Identities=16%  Similarity=0.053  Sum_probs=67.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCC-Cc----cccc-----cCCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPA-PA----DFLR-----DWGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~-~~----~~l~-----~~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      ||.|+||+|.+|+.++..|+.+|.  ++.+++.+..+ ..    ..+.     .....+..+|+       +.++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~-------~~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY-------EDTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG-------GGGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH-------HHhhhcCEE
Confidence            799999999999999999999974  78888863211 11    1111     11234444443       236799999


Q ss_pred             EECCCCC--CC---CcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          153 IDCATGR--PE---EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       153 i~~a~~~--~~---~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      |.+||..  +.   .+....|..-.+.+++...+++.+ .++.+|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            9999822  21   233457888888999999998765 344444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=3.2e-05  Score=61.72  Aligned_cols=103  Identities=14%  Similarity=0.138  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC----c---EEEEecCCCCCccccc-------c---CCcEEEEccCCCCCcHHHH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY----D---VRCLVRPRPAPADFLR-------D---WGATVVNADLSKPETIPAT  145 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~----~---V~~~~r~~~~~~~~l~-------~---~~v~~~~~Dl~d~~~l~~~  145 (399)
                      ++||.|+||+|++|++++..|+..+.    +   ..++.-.  .....+.       .   .....+..    .....++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   77 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVA   77 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccc--cchhhHcCchhhhhcccccccccccc----CCchhhh
Confidence            46999999999999999999998752    1   1222211  1111010       0   11222222    2346678


Q ss_pred             hcCCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCCc--EEEEec
Q 015872          146 LVGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ--KYVFYS  191 (399)
Q Consensus       146 ~~~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v~--~~V~~S  191 (399)
                      ++++|+||.++|..     ...+....|+.-.+.+.+.+.++..+  .++.+|
T Consensus        78 ~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            99999999999932     22234456888888999999886432  455555

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=3.2e-05  Score=63.01  Aligned_cols=73  Identities=21%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|||+||+|-+|...++.+...|.+|+++++++ +..+.+++.+...+ .|..+.+..+++.     +++|+||++.|
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~-~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTE-EGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCEEEEEeccccccccccccccccCcccccccccc-cccccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence            46899999999999999999999999999999864 34455556676443 3666655443332     25899999986

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.55  E-value=2.1e-05  Score=64.06  Aligned_cols=105  Identities=12%  Similarity=0.034  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---C----cEEEEecCCCCC-ccc----cccC---CcEEEEccCCCCCcHHHHhc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG---Y----DVRCLVRPRPAP-ADF----LRDW---GATVVNADLSKPETIPATLV  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g---~----~V~~~~r~~~~~-~~~----l~~~---~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .-||.|+||+|.||++++-.|++.+   .    .++.++...... .+.    +...   ....+..    .....++++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~   99 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVFE   99 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhcc
Confidence            3479999999999999999998753   1    444555432111 010    1111   1111111    234678899


Q ss_pred             CCCEEEECCCCC-----CCCcchhccHHHHHHHHHHHHHcCC--cEEEEec
Q 015872          148 GVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI--QKYVFYS  191 (399)
Q Consensus       148 ~~d~Vi~~a~~~-----~~~~~~~~n~~~~~~l~~aa~~~~v--~~~V~~S  191 (399)
                      ++|+||-++|..     ...+....|..-.+.+.+++.++..  -+++.+|
T Consensus       100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            999999999832     2234456788888999999988643  2555565

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00011  Score=58.34  Aligned_cols=56  Identities=27%  Similarity=0.332  Sum_probs=45.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..+++|.|+||.|.+|+.+++.|.+.||+|.+.+|+...                     .....+.++|.++.+..
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~---------------------~~~~~~~~~~~v~~~~~   62 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA---------------------VAESILANADVVIVSVP   62 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG---------------------GHHHHHTTCSEEEECSC
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc---------------------ccchhhhhccccccccc
Confidence            346799999999999999999999999999999986322                     23445678888888764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.53  E-value=7.9e-05  Score=58.63  Aligned_cols=100  Identities=17%  Similarity=0.132  Sum_probs=66.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc---cccc----c--CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA---DFLR----D--WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~---~~l~----~--~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|+ |++|..++..|+.+|  .++.+++++..+..   ..+.    .  .......+|.       +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            68999995 999999999999887  58999888643211   0111    1  1233333332       346899999


Q ss_pred             EECCCCC---------CCCcchhccHHHHHHHHHHHHHcCCcE-EEEec
Q 015872          153 IDCATGR---------PEEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (399)
Q Consensus       153 i~~a~~~---------~~~~~~~~n~~~~~~l~~aa~~~~v~~-~V~~S  191 (399)
                      |-+||..         ...+....|....+.+++..++++.+- ++.+|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999831         112334578888888999999887654 44444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.51  E-value=4.1e-05  Score=63.23  Aligned_cols=36  Identities=22%  Similarity=0.372  Sum_probs=33.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      |||.|+||+|.+|+.+++.|++.||+|.+.+|++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            679999999999999999999999999999998544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.51  E-value=7.5e-05  Score=60.12  Aligned_cols=80  Identities=13%  Similarity=0.078  Sum_probs=53.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |||.|+|. |.+|+.+++.|.++||+|.+++|+++.. +.....++.....|      ..++++++|+||-+..      
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~-~~a~~~~~~~~~~~------~~~~~~~~DiIilavp------   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTC-EKAVERQLVDEAGQ------DLSLLQTAKIIFLCTP------   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTSCSEEES------CGGGGTTCSEEEECSC------
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHH-HHHHHhhccceeee------ecccccccccccccCc------
Confidence            67999986 9999999999999999999999974332 22233332111111      1246789999998764      


Q ss_pred             chhccHHHHHHHHHHHHHc
Q 015872          164 IKKVDWEGKVALIQCAKAM  182 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~  182 (399)
                           ...+..+++.....
T Consensus        67 -----~~~~~~vl~~l~~~   80 (165)
T d2f1ka2          67 -----IQLILPTLEKLIPH   80 (165)
T ss_dssp             -----HHHHHHHHHHHGGG
T ss_pred             -----Hhhhhhhhhhhhhh
Confidence                 13345566655544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.00012  Score=58.27  Aligned_cols=104  Identities=15%  Similarity=0.107  Sum_probs=69.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCc---ccccc----CC-cEEE-EccCCCCCcHHHHhcC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA---DFLRD----WG-ATVV-NADLSKPETIPATLVG  148 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~---~~l~~----~~-v~~~-~~Dl~d~~~l~~~~~~  148 (399)
                      .++..||.|+|+ |.+|..++..|+.+|  .++.+++++.+...   ..+.+    .+ -..+ ..|+       +.+++
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~   87 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSAN   87 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhcc
Confidence            455678999996 999999999999997  48999998643211   11111    11 1222 2232       34689


Q ss_pred             CCEEEECCCC-----CCCCcchhccHHHHHHHHHHHHHcCCc-EEEEec
Q 015872          149 VHTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (399)
Q Consensus       149 ~d~Vi~~a~~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~-~~V~~S  191 (399)
                      +|+||.++|.     ....+..+.|....+.++....+++.+ .++.+|
T Consensus        88 adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          88 SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9999999983     233444567888888888888888765 444444

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.45  E-value=7.3e-05  Score=59.53  Aligned_cols=105  Identities=13%  Similarity=0.023  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCCCCC-cccc----cc---CCcEEEEccCCCCCcHHHHhc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAP-ADFL----RD---WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~~~~-~~~l----~~---~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      ++||.|+||+|.+|++++-.|++.+-       +++.++.+.... .+.+    ..   .....+.+    .....++++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~   78 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFK   78 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccC
Confidence            57899999999999999999987541       344444332111 0101    00   11111111    223567889


Q ss_pred             CCCEEEECCCC-----CCCCcchhccHHHHHHHHHHHHHc-CCc-EEEEec
Q 015872          148 GVHTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAM-GIQ-KYVFYS  191 (399)
Q Consensus       148 ~~d~Vi~~a~~-----~~~~~~~~~n~~~~~~l~~aa~~~-~v~-~~V~~S  191 (399)
                      ++|+||-++|.     ....+....|..-.+.+.+...++ +-. .++.+|
T Consensus        79 ~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999982     233455677888888888888775 433 344455

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.44  E-value=0.00011  Score=59.99  Aligned_cols=95  Identities=15%  Similarity=0.093  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEe-cCCCC-Cccccc-------cC-CcEEEEccCCCCCcHHHHhcCCCE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPA-PADFLR-------DW-GATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~-r~~~~-~~~~l~-------~~-~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      |++|.|+|||||+|+.|++.|.++ .++|..+. +.... .-+.+.       .. ......     .+.......++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQP-----MSDVRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEE-----ESCGGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeeccccccccccccccccccccccccccc-----chhhhhhhcccce
Confidence            578999999999999999999997 56776554 22111 111110       00 111111     1223334568999


Q ss_pred             EEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       152 Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      ||.+.+.           .....+.....+.++ ++|-.|+..
T Consensus        76 vf~alp~-----------~~s~~~~~~~~~~~~-~vIDlSadf  106 (179)
T d2g17a1          76 VFLATAH-----------EVSHDLAPQFLQAGC-VVFDLSGAF  106 (179)
T ss_dssp             EEECSCH-----------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             eeccccc-----------hhHHHHhhhhhhcCc-eeecccccc
Confidence            9999761           223456666667676 677777654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.43  E-value=4.6e-05  Score=62.48  Aligned_cols=97  Identities=20%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.+ ..+.+++.+...+ .|..+++...++.     +++|+||++.|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~-~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA-KREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH-HHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccc-ccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            468999999999999999999899999999998744 4556667776544 4555554333332     36999999987


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .           ......+++++..  .++|.++..+
T Consensus       104 ~-----------~~~~~~~~~l~~~--G~~v~~G~~~  127 (183)
T d1pqwa_         104 G-----------EAIQRGVQILAPG--GRFIELGKKD  127 (183)
T ss_dssp             T-----------HHHHHHHHTEEEE--EEEEECSCGG
T ss_pred             c-----------hHHHHHHHHhcCC--CEEEEEccCC
Confidence            2           1122344444333  3788876443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.43  E-value=0.00013  Score=56.98  Aligned_cols=100  Identities=11%  Similarity=0.018  Sum_probs=65.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---cccc----C--CcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRD----W--GATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~----~--~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |||.|+|+ |.+|..++..|+.+|  .++.+++++++....   .+.+    .  ...+...+     +. +.++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~-----d~-~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-----DY-SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES-----CG-GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC-----CH-HHhccccEE
Confidence            68999996 999999999999887  579999987433211   0110    1  12222211     12 367899999


Q ss_pred             EECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       153 i~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                      |-.+|...     ..+....|..-.+.+++.+++++.+-++.+
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV  116 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEE
Confidence            99998321     123335677778888888888876544433

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.42  E-value=0.00048  Score=53.74  Aligned_cols=99  Identities=17%  Similarity=0.184  Sum_probs=64.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCcc---ccc------cCCcEEEE-ccCCCCCcHHHHhcCCCEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD---FLR------DWGATVVN-ADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~---~l~------~~~v~~~~-~Dl~d~~~l~~~~~~~d~V  152 (399)
                      +||.|+|+ |.+|..++-.|+.++ .++.+++.+++....   .+.      .....+.. .|+       +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            68999996 999999999998887 488888886543211   111      01122221 222       246899999


Q ss_pred             EECCCC-----CCCCcchhccHHHHHHHHHHHHHcCCcEEEEe
Q 015872          153 IDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (399)
Q Consensus       153 i~~a~~-----~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~  190 (399)
                      |-+||.     ....+....|..-.+.+++...+++.+-++.+
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            999983     22334456788888899999998876544444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=9.4e-05  Score=61.73  Aligned_cols=73  Identities=14%  Similarity=0.180  Sum_probs=48.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEE-------------EEccCCCCCcHHHHhcCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATV-------------VNADLSKPETIPATLVGVH  150 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~-------------~~~Dl~d~~~l~~~~~~~d  150 (399)
                      |+|.|+|. ||+|..++..|+++||+|++++.+... .+.+......+             ....+.-..++.++++++|
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~-i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTK-IDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHH-HHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            68999975 999999999999999999999986322 11111100000             0011112345677888999


Q ss_pred             EEEECCCC
Q 015872          151 TVIDCATG  158 (399)
Q Consensus       151 ~Vi~~a~~  158 (399)
                      +++.|.+.
T Consensus        79 ~i~i~VpT   86 (202)
T d1mv8a2          79 VSFICVGT   86 (202)
T ss_dssp             EEEECCCC
T ss_pred             EEEEecCc
Confidence            99999973

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.40  E-value=0.00014  Score=56.96  Aligned_cols=101  Identities=13%  Similarity=0.132  Sum_probs=67.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCcc---cccc----C-CcEEEEccCCCCCcHHHHhcCCCEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRD----W-GATVVNADLSKPETIPATLVGVHTVI  153 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~---~l~~----~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi  153 (399)
                      .||.|+|+ |.+|.+++..|+.+|  .++.++++++.....   .+.+    . ...+...+     +. +.++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~-----~~-~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD-----DP-EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES-----CG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC-----CH-HHhhCCcEEE
Confidence            47999997 999999999999998  489999987432211   1111    1 12222222     12 3578999999


Q ss_pred             ECCCCCC-----CCcchhccHHHHHHHHHHHHHcCCcEE-EEec
Q 015872          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKY-VFYS  191 (399)
Q Consensus       154 ~~a~~~~-----~~~~~~~n~~~~~~l~~aa~~~~v~~~-V~~S  191 (399)
                      .++|...     ..+....|..-.+.++..+.+++.+-+ +.+|
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999322     123445788888889999998876544 4444

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=4.8e-05  Score=62.16  Aligned_cols=73  Identities=19%  Similarity=0.118  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.++ .+.+++.+...+ .|..+++..+++.     .++|+|+++.+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k-~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK-AQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHH-HHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            4689999999999999999999999999999998443 344555565544 4777655444332     25899999987

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.36  E-value=0.00026  Score=56.64  Aligned_cols=65  Identities=20%  Similarity=0.261  Sum_probs=50.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||.|+|- |.+|..+++.|+++||+|++.+|++.+ .+.+...+...       .++..++++++|+||-|..
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~-~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEA-IADVIAAGAET-------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcch-hHHHHHhhhhh-------cccHHHHHhCCCeEEEEcC
Confidence            57999986 999999999999999999999998443 33333444332       2457778889999999975

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.36  E-value=0.00018  Score=55.20  Aligned_cols=70  Identities=17%  Similarity=0.216  Sum_probs=56.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~  157 (399)
                      |+|+|+|. |.+|..+++.|  +|++|.+++.+ +.....+...++.++.||.+|++.|.++ +..++.||-+..
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d-~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAED-ENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESC-TTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcc-hHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            46889986 99999999998  46788888886 4444555667999999999999888765 467999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00016  Score=57.83  Aligned_cols=95  Identities=20%  Similarity=0.298  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEe-cCCCCCc-cccccC-CcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPAPA-DFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~-r~~~~~~-~~l~~~-~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      .+||+|.|++|..|+.+++.+.+. +.++.+.. |...+.. ..+... +..  ..++.-.+++..+++.+|+||++.. 
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~~~~~~~~~~DViIDFs~-   80 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTR-   80 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc--cCCceeeccHHHHhcccceEEEecc-
Confidence            468999999999999999999886 66765554 3322111 111000 000  0111112334456778999999954 


Q ss_pred             CCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       159 ~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                                -.++...+++|.++++ .+|.=+
T Consensus        81 ----------p~~~~~~~~~a~~~~~-~~ViGT  102 (162)
T d1diha1          81 ----------PEGTLNHLAFCRQHGK-GMVIGT  102 (162)
T ss_dssp             ----------HHHHHHHHHHHHHTTC-EEEECC
T ss_pred             ----------HHHHHHHHHHHHhccc-eeEEec
Confidence                      3668889999999997 556333

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.30  E-value=0.00073  Score=47.88  Aligned_cols=85  Identities=18%  Similarity=0.197  Sum_probs=62.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~  163 (399)
                      |||.++|-.|-==+.|++.|.++|++|.+.++...+..+.|...|+++..+.  +++.    +.++|.||...+..... 
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~~n-   74 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKTPAVRDDN-   74 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTS----CCCCSEEEECTTCCTTC-
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--cccc----cCCCCEEEEecCcCCCC-
Confidence            6899998744433478999999999999999987667777888898887652  3333    36789999988743222 


Q ss_pred             chhccHHHHHHHHHHHHHcCCc
Q 015872          164 IKKVDWEGKVALIQCAKAMGIQ  185 (399)
Q Consensus       164 ~~~~n~~~~~~l~~aa~~~~v~  185 (399)
                                .-+.+|++.|++
T Consensus        75 ----------pel~~A~~~gIp   86 (89)
T d1j6ua1          75 ----------PEIVRARMERVP   86 (89)
T ss_dssp             ----------HHHHHHHHTTCC
T ss_pred             ----------HHHHHHHHcCCC
Confidence                      246677887774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.27  E-value=0.00022  Score=58.21  Aligned_cols=96  Identities=18%  Similarity=0.238  Sum_probs=60.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC-Ccccccc------CCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD------WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~-~~~~l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      |+|.|+|+ |..|.+++..|.+.|++|.+..|..++ ....+..      .+......++.-.+++.++++++|.||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999997 999999999999999999999985322 1111111      111111112223466888999999999986


Q ss_pred             CCCCCCcchhccHHHHHHHHHHHHHcCC-cEEEEec
Q 015872          157 TGRPEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYS  191 (399)
Q Consensus       157 ~~~~~~~~~~~n~~~~~~l~~aa~~~~v-~~~V~~S  191 (399)
                      ..           .+...+++..+..-- +.+|.++
T Consensus        80 ps-----------~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          80 ST-----------DGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             CG-----------GGHHHHHHHHTTTCCSCEEEECC
T ss_pred             ch-----------hhhHHHHHhhccccccceecccc
Confidence            51           345566665554432 3444443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.25  E-value=0.00034  Score=55.94  Aligned_cols=113  Identities=17%  Similarity=0.149  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~  162 (399)
                      |++|.|+|- |.+|..+++.|+++||+|.+.+|+..+ .+.+...+..       ...+..+++..+|+|+-|....   
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~-~~~~~~~~~~-------~~~~~~e~~~~~diii~~v~~~---   68 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA-VDGLVAAGAS-------AARSARDAVQGADVVISMLPAS---   68 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH-HHHHHHTTCE-------ECSSHHHHHTSCSEEEECCSCH---
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhh-hhhhhhhhcc-------ccchhhhhccccCeeeecccch---
Confidence            468999985 999999999999999999999997443 2333332221       1245778889999999987521   


Q ss_pred             cchhccHHHHHHHHHH----HHHcCC-cEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 015872          163 PIKKVDWEGKVALIQC----AKAMGI-QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~a----a~~~~v-~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~i  223 (399)
                             .....++..    .....- +-+|-.||..         .......++.+++.|+.+.-
T Consensus        69 -------~~~~~v~~~~~~~~~~l~~g~iiid~st~~---------p~~~~~~~~~~~~~gi~~~d  118 (162)
T d3cuma2          69 -------QHVEGLYLDDDGLLAHIAPGTLVLECSTIA---------PTSARKIHAAARERGLAMLD  118 (162)
T ss_dssp             -------HHHHHHHHSTTCHHHHSCTTCEEEECSCCC---------HHHHHHHHHHHHHTTCEEEE
T ss_pred             -------hhHHHHHhccccccccCCCCCEEEECCCCC---------HHHHHHHHHHHHHCCCcEEe
Confidence                   122233321    122222 2355555544         23345566677788887664

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.23  E-value=9.1e-05  Score=60.77  Aligned_cols=76  Identities=20%  Similarity=0.249  Sum_probs=44.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCC-cEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~-v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .++.||.|+||||++|+.+++.|.++. .++..+.-+... -+.+.... -.....+....+.....+.++|+||.+.+
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp   80 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKA-GEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLP   80 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTT-TSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccC-CCccccccccccccccccchhhhhhhhcccceeeeccc
Confidence            345789999999999999999999874 577666533221 11111000 00000112222223344568999998875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.23  E-value=0.00069  Score=53.24  Aligned_cols=102  Identities=15%  Similarity=0.153  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccc---ccc------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~---l~~------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .+||.|+|+ |.+|+.++..|..++ .++.+++++.......   +.+      ....+...+      ..+.++++|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~------~~~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN------TYDDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC------CGGGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc------cccccCCCcEE
Confidence            358999996 999999998777776 5888888865432111   111      122233222      22457899999


Q ss_pred             EECCCCCC----------CCcchhccHHHHHHHHHHHHHcCCcEE-EEec
Q 015872          153 IDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQKY-VFYS  191 (399)
Q Consensus       153 i~~a~~~~----------~~~~~~~n~~~~~~l~~aa~~~~v~~~-V~~S  191 (399)
                      |.++|...          .......|....+.+++.+++++.+-+ +.+|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99998321          223356788888899999999886644 4444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.21  E-value=0.00022  Score=57.88  Aligned_cols=101  Identities=21%  Similarity=0.221  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCC-CcHHHHh--cCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATL--VGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~-~~l~~~~--~~~d~Vi~~a~~~  159 (399)
                      ..+|||+||+|.+|...++.+...|.+|++.++++++ .+.++..+...+. |..+. +......  +++|+||++.|..
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vgg~  109 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-HDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVGGR  109 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-HHHHHHTTCSEEE-ECC---------CCSCCEEEEEECSTTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-HHHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCCch
Confidence            3579999999999999999999999999999998554 4445556654432 33321 1121222  3799999998832


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCC
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH  198 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~  198 (399)
                      .           ....++..+..  .|+|.++..+....
T Consensus       110 ~-----------~~~~l~~l~~~--Griv~~G~~~g~~~  135 (176)
T d1xa0a2         110 T-----------LATVLSRMRYG--GAVAVSGLTGGAEV  135 (176)
T ss_dssp             T-----------HHHHHHTEEEE--EEEEECSCCSSSCC
T ss_pred             h-----------HHHHHHHhCCC--ceEEEeecccCccc
Confidence            1           12233333332  38888887654443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.00022  Score=57.42  Aligned_cols=74  Identities=14%  Similarity=0.093  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCC-CCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~-d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ..+|+|+|+ |.+|...++.+...|.+|++++++++ +.+..++.|...+. |.. +.+......+++|+|+.+.+..
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~-k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSR-KREDAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSST-THHHHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchh-HHHHhhccCCcEEe-eccchHHHHHhhhcccceEEEEecCC
Confidence            468999987 99999999988888999999999754 44445555654433 333 3344444556799999998743

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00029  Score=57.26  Aligned_cols=98  Identities=17%  Similarity=0.149  Sum_probs=63.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~~  161 (399)
                      .+|||+||+|.+|...++.+...|.+|+++++++++ .+.++..+...+. |..+.+.. +.+.  ..|.||++.+..  
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k-~~~~~~lGad~vi-~~~~~~~~-~~l~~~~~~~vvD~Vgg~--  107 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST-HEYLKSLGASRVL-PRDEFAES-RPLEKQVWAGAIDTVGDK--  107 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG-HHHHHHHTEEEEE-EGGGSSSC-CSSCCCCEEEEEESSCHH--
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH-HHHHHhhcccccc-ccccHHHH-HHHHhhcCCeeEEEcchH--
Confidence            479999999999999999999999999999998554 3445555665443 44333322 2232  468999998720  


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK  197 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~  197 (399)
                               .....++.++..  .++|.++..+...
T Consensus       108 ---------~~~~~l~~l~~~--Griv~~G~~~~~~  132 (177)
T d1o89a2         108 ---------VLAKVLAQMNYG--GCVAACGLAGGFT  132 (177)
T ss_dssp             ---------HHHHHHHTEEEE--EEEEECCCTTCSC
T ss_pred             ---------HHHHHHHHhccc--cceEeecccCCcc
Confidence                     112233332222  3888888765443

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.15  E-value=0.0025  Score=47.57  Aligned_cols=103  Identities=17%  Similarity=0.240  Sum_probs=68.2

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           84 TSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      |+|.|+|+|   +..|..+.+.|++.||+|+.+..+. +  . +  .|...       ..++.++=..+|.++-+..   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~-~--~-i--~G~~~-------y~sl~~lp~~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-D--E-I--EGLKC-------YRSVRELPKDVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-S--E-E--TTEEC-------BSSGGGSCTTCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc-c--c-c--cCccc-------cccchhccccceEEEEEeC---
Confidence            679999998   7899999999999999988764321 1  1 1  12211       2334444457899888754   


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                              -..+..+++.|.+.|++.+++-+..  ..          -..++++++.|++++
T Consensus        66 --------~~~~~~~l~~~~~~g~k~v~~~~g~--~~----------~~~~~~a~~~gi~vi  107 (116)
T d1y81a1          66 --------PKVGLQVAKEAVEAGFKKLWFQPGA--ES----------EEIRRFLEKAGVEYS  107 (116)
T ss_dssp             --------HHHHHHHHHHHHHTTCCEEEECTTS--CC----------HHHHHHHHHHTCEEE
T ss_pred             --------HHHHHHHHHHHHhcCCceEEeccch--hh----------HHHHHHHHHcCCEEE
Confidence                    2456788889999999876553321  11          145677888887543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.15  E-value=0.00016  Score=58.59  Aligned_cols=73  Identities=14%  Similarity=0.052  Sum_probs=44.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccC-CCCCcHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADL-SKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl-~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+||.|+||||++|+.+++.|.+.. .+|..+..+.... +.+....-. ...+. ....+.....+++|+||.+.+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG-~~i~~~~p~-~~~~~~~~~~~~~~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAG-KKLEEIFPS-TLENSILSEFDPEKVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT-SBHHHHCGG-GCCCCBCBCCCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCC-CcccccCch-hhccccccccCHhHhccccceEEEccc
Confidence            4689999999999999999998864 5777665432221 111100000 00111 112334555678999998876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.14  E-value=0.00075  Score=54.19  Aligned_cols=97  Identities=24%  Similarity=0.324  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcE-EEEccCCCCC--cHHHHh-----cCCCEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT-VVNADLSKPE--TIPATL-----VGVHTVID  154 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~-~~~~Dl~d~~--~l~~~~-----~~~d~Vi~  154 (399)
                      ..+|+|+| +|.+|...++.+...|.+|+++++++.+ .+..++.+.. .+..|..+.+  .+.+.+     .++|+||+
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r-~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR-LEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHH-HHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            35799997 6999999999999999999999997443 3334445543 3334433322  222222     36999999


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      ++|..          ......++.++..|  +++.++..
T Consensus       105 ~~g~~----------~~~~~a~~~~~~~G--~iv~~G~~  131 (170)
T d1e3ja2         105 CSGNE----------KCITIGINITRTGG--TLMLVGMG  131 (170)
T ss_dssp             CSCCH----------HHHHHHHHHSCTTC--EEEECSCC
T ss_pred             cCCCh----------HHHHHHHHHHhcCC--ceEEEecC
Confidence            99721          11223444444443  78888754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.11  E-value=0.003  Score=48.70  Aligned_cols=104  Identities=16%  Similarity=0.115  Sum_probs=69.6

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .++|+|+|+|   +..|..+++.|.+.||+|+.+.... .  . +  .|...       ..++.++-..+|.|+-+..  
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~-~--~-i--~G~~~-------~~sl~dlp~~iD~v~i~vp--   83 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY-E--E-V--LGRKC-------YPSVLDIPDKIEVVDLFVK--   83 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-S--E-E--TTEEC-------BSSGGGCSSCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc-c--c-c--CCCcc-------cccccccCccceEEEEEeC--
Confidence            4789999998   7899999999999999987765431 1  1 1  11111       2234444456899888754  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                               ...+..+++.|.+.|++.+++.+....            -++++.+++.|+.++
T Consensus        84 ---------~~~~~~~~~e~~~~g~k~v~~~~G~~~------------ee~~~~a~~~gi~vi  125 (139)
T d2d59a1          84 ---------PKLTMEYVEQAIKKGAKVVWFQYNTYN------------REASKKADEAGLIIV  125 (139)
T ss_dssp             ---------HHHHHHHHHHHHHHTCSEEEECTTCCC------------HHHHHHHHHTTCEEE
T ss_pred             ---------HHHHHHHHHHHHHhCCCEEEEeccccC------------HHHHHHHHHCCCEEE
Confidence                     355778899999999987665443221            145667778887544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=7.2e-05  Score=61.91  Aligned_cols=104  Identities=13%  Similarity=0.146  Sum_probs=66.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccc----------ccCCc-----------EEEEccCCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----------RDWGA-----------TVVNADLSKP  139 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l----------~~~~v-----------~~~~~Dl~d~  139 (399)
                      |+-++|.|+|| |.+|+.++..++..||+|++++++++......          ...+.           .-....+.-.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            45689999998 99999999999999999999999753211100          00010           0000112223


Q ss_pred             CcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          140 ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       140 ~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .++.++++++|.||-++.         -|+..-+.++....+.-....|+.|+.+
T Consensus        81 ~d~~~a~~~ad~ViEav~---------E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          81 TDAASVVHSTDLVVEAIV---------ENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             SCHHHHTTSCSEEEECCC---------SCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             chhHhhhcccceehhhcc---------cchhHHHHHHHHHhhhcccCceeeccCc
Confidence            457778899999999986         3345566677766665444455555433

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.03  E-value=0.0021  Score=46.16  Aligned_cols=85  Identities=20%  Similarity=0.251  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCChhH-HHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           83 PTSILVVGATGTLG-RQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        83 ~~~vlVtGatG~iG-~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      .++|.++|- |.+| +.|++.|.++||+|.+.++......+.+...++.+..++-.  +    .+.++|.||...+....
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~i~~~d~vV~S~AI~~~   80 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE--E----HIEGASVVVVSSAIKDD   80 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG--G----GGTTCSEEEECTTSCTT
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc--c----cCCCCCEEEECCCcCCC
Confidence            478999876 3344 67899999999999999998766677777789988776532  2    34688999988773322


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCc
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQ  185 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~  185 (399)
                      .           .-+.+|++.|++
T Consensus        81 n-----------pel~~A~~~gip   93 (96)
T d1p3da1          81 N-----------PELVTSKQKRIP   93 (96)
T ss_dssp             C-----------HHHHHHHHTTCC
T ss_pred             C-----------HHHHHHHHcCCC
Confidence            1           235556777763

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00015  Score=49.94  Aligned_cols=37  Identities=27%  Similarity=0.395  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      .++|+|+||+|-+|...++.+...|++|+++++++++
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            4679999999999999999989999999999997443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.02  E-value=0.0031  Score=49.64  Aligned_cols=92  Identities=18%  Similarity=0.236  Sum_probs=53.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC---cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~---~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~  161 (399)
                      +|.|+||||++|..|++.|.++.+   ++..+..+ ...-+.+....-.....+..+     ..+.+.|.++.+++.   
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~-~s~G~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~~---   73 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAGS---   73 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG-GGTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSCH---
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc-ccccccccccCCcccccccch-----hhhhhhhhhhhccCc---
Confidence            699999999999999999988864   33333322 111111211111222222222     234678999888761   


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                              ..+..+...+.+.++ ++|=.|+..
T Consensus        74 --------~~s~~~~~~~~~~~~-~VIDlSsdf   97 (154)
T d2gz1a1          74 --------STSAKYAPYAVKAGV-VVVDNTSYF   97 (154)
T ss_dssp             --------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --------cchhhHHhhhccccc-eehhcChhh
Confidence                    234455666666676 677666654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.00  E-value=0.0042  Score=47.19  Aligned_cols=91  Identities=13%  Similarity=0.101  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCC---ChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGAT---GTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGat---G~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+++|.|+|||   |..|..+.+.|.+.| ++|+.+..+...    +  .|+.. .-++.|      +=..+|.++-+..
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~----i--~G~~~-y~sl~d------lp~~vDlvvi~vp   73 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE----V--QGVKA-YKSVKD------IPDEIDLAIIVVP   73 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE----E--TTEEC-BSSTTS------CSSCCSEEEECSC
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc----c--CCeEe-ecchhh------cCCCCceEEEecC
Confidence            46789999999   999999999998766 688877544211    1  12111 123322      3346899988764


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCC
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD  196 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~  196 (399)
                                 -..+..+++.|.+.|++.++.+|+...+
T Consensus        74 -----------~~~~~~~~~~~~~~g~~~~vi~s~Gf~e  101 (129)
T d2csua1          74 -----------KRFVKDTLIQCGEKGVKGVVIITAGFGE  101 (129)
T ss_dssp             -----------HHHHHHHHHHHHHHTCCEEEECCCSSTT
T ss_pred             -----------hHHhHHHHHHHHHcCCCEEEEecccccc
Confidence                       2456788999999999988888876544

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.99  E-value=0.0006  Score=53.80  Aligned_cols=65  Identities=17%  Similarity=0.189  Sum_probs=47.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||.|+|. |.+|+.+++.|+++||+|.+.++.+.+...... .++.     +  .++..++++++|+||-|..
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~-----~--~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-RTVG-----V--TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-HHHT-----C--EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh-hccc-----c--cccHHHHHhhcCeEEEEec
Confidence            57999975 999999999999999999998887554432221 1211     1  1235677889999999875

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.97  E-value=0.0031  Score=48.30  Aligned_cols=70  Identities=19%  Similarity=0.230  Sum_probs=50.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHH-hcCCCEEEECCCCCCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vi~~a~~~~~~  162 (399)
                      ||.|+|++|..|+.+++.+.+. ++++.+..-..                    +  .+... ..++|+||++..+    
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~--------------------~--~~~~~~~~~~DvvIDFS~p----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG--------------------D--PLSLLTDGNTEVVIDFTHP----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT--------------------C--CTHHHHTTTCSEEEECCCT----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--------------------C--chhhhccccCCEEEEcccH----
Confidence            6999999999999999988775 67766544211                    1  11111 2478999999642    


Q ss_pred             cchhccHHHHHHHHHHHHHcCCcEEE
Q 015872          163 PIKKVDWEGKVALIQCAKAMGIQKYV  188 (399)
Q Consensus       163 ~~~~~n~~~~~~l~~aa~~~~v~~~V  188 (399)
                             .++...++.|.+.|+ .+|
T Consensus        55 -------~~~~~~~~~~~~~~~-~~V   72 (135)
T d1yl7a1          55 -------DVVMGNLEFLIDNGI-HAV   72 (135)
T ss_dssp             -------TTHHHHHHHHHHTTC-EEE
T ss_pred             -------HHHHHHHHHHHhcCC-CEE
Confidence                   447789999999998 455

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.00096  Score=56.14  Aligned_cols=165  Identities=11%  Similarity=0.062  Sum_probs=87.9

Q ss_pred             cCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC--CCcHHHHhcCCCEEEECCCCCCCC-----
Q 015872           90 GATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPATLVGVHTVIDCATGRPEE-----  162 (399)
Q Consensus        90 GatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~~~~~d~Vi~~a~~~~~~-----  162 (399)
                      -.||..|.+|++++..+|++|+++.-......    ..++..+...-.+  .+.+.+.+..+|++|++|+..+..     
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~  104 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVA  104 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCC
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCc----ccccccceehhhHHHHHHHHhhhccceeEeeeechhhhhhhhhh
Confidence            45899999999999999999999987533211    1245555443211  123344456899999999832210     


Q ss_pred             --c---------chhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEEecCc---
Q 015872          163 --P---------IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCG---  228 (399)
Q Consensus       163 --~---------~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~ilRp~~---  228 (399)
                        .         -..+++.-+..++....+....+.+.++-.. +...  .    ...+.+-+.+.++++++...-.   
T Consensus       105 ~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaa-Et~~--l----~~~A~~Kl~~K~~D~IvAN~v~~~~  177 (223)
T d1u7za_         105 PEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAA-ETNN--V----EEYARQKRIRKNLDLICANDVSQPT  177 (223)
T ss_dssp             SSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEE-ESSS--H----HHHHHHHHHHHTCSEEEEEECSSTT
T ss_pred             hhhcccccccccccceeeecCHHHHHHHHhhccCCceEEEEee-cccc--h----hhHHHHHHHhcCCCEEEeecccCCC
Confidence              0         0112233344466665554433323333322 2111  1    1122334666789999887522   


Q ss_pred             -ccccccccchhhhccccccccCCCCcceeceeHHHHHHHHHHHHh
Q 015872          229 -FMQGLIGQYAVPILEEKSVWGTDALTRIAYMDTQDIARLTFVALR  273 (399)
Q Consensus       229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~l~  273 (399)
                       .|+.-.+.        ..++..++...++..+-.++|+.|+..+.
T Consensus       178 ~~fgsd~n~--------v~ii~~~~~~~~~~~sK~~iA~~Il~~I~  215 (223)
T d1u7za_         178 QGFNSDNNA--------LHLFWQDGDKVLPLERKELLGQLLLDEIV  215 (223)
T ss_dssp             SSTTSSEEE--------EEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             CCcCCCceE--------EEEEECCCeEEcCCCCHHHHHHHHHHHHH
Confidence             12211111        11222222333455677899998887653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.00029  Score=56.69  Aligned_cols=73  Identities=19%  Similarity=0.281  Sum_probs=54.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ..+|+|.|+ |-+|...++.+...|.++++++++.+ ..+..++.+...+ .|..+.+......+++|+||.+.|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~-~~~~a~~lGad~~-i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEA-KREAAKALGADEV-VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchh-HHHHHhccCCcEE-EECchhhHHHHhcCCCceeeeeeec
Confidence            468999986 89999999999999999999888744 3344455565443 4665555555556789999999873

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.93  E-value=0.00019  Score=56.82  Aligned_cols=66  Identities=11%  Similarity=0.083  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |||.|+|+ |.+|+++++.|++.|++|++..|+.++..+..+..++..       ..+..++++++|+||-+.-
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~-------~~~~~~~~~~~dvIilavk   66 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGIK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECSC
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee-------echhhhhhhccceeeeecc
Confidence            67999985 999999999999999999999997544332222223322       2357778889999998863

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.92  E-value=0.0015  Score=52.69  Aligned_cols=71  Identities=18%  Similarity=0.225  Sum_probs=49.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcE--EEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT--VVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~--~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+|.|+|- |..|..+++.|++.||+|++.+|++++..+ +...+..  ...+ ....+++...+..+|.+|-+..
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~-l~~~~~~~~~~~~-a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDD-FLANEAKGTKVLG-AHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHH-HHHTTTTTSSCEE-CSSHHHHHHHBCSSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHH-HHHhccccccccc-hhhhhhhhhhhcccceEEEecC
Confidence            46999997 999999999999999999999998554333 2221110  0011 2234456677788999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.90  E-value=0.0012  Score=52.93  Aligned_cols=82  Identities=11%  Similarity=0.115  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCCCCCccccccCCc-EEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~~~~~~~l~~~~v-~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ||+|+|+|. |.+|..+++.|.+.|+  +|++.+|+.+.... ....+. ....-+.     .......+|.||.+..  
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~-a~~~~~~~~~~~~~-----~~~~~~~~dlIila~p--   71 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISK-AVDLGIIDEGTTSI-----AKVEDFSPDFVMLSSP--   71 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH-HHHTTSCSEEESCG-----GGGGGTCCSEEEECSC--
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHH-HHHhhcchhhhhhh-----hhhhccccccccccCC--
Confidence            467999985 9999999999999986  67888887433222 222222 1111111     1123347899999865  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHc
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAM  182 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~  182 (399)
                               ...+.++++.....
T Consensus        72 ---------~~~~~~vl~~l~~~   85 (171)
T d2g5ca2          72 ---------VRTFREIAKKLSYI   85 (171)
T ss_dssp             ---------HHHHHHHHHHHHHH
T ss_pred             ---------chhhhhhhhhhhcc
Confidence                     23355666655543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.88  E-value=0.00015  Score=59.72  Aligned_cols=74  Identities=9%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc--------CCcEEEEccCCCCCcHHHHhcCCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--------WGATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~--------~~v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      |.|+||.|+|| |.-|.+++..|.+.||+|++.+|+++.. +.+..        .++.. .-++.-..++.++++++|.|
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~-~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEV-RLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHH-HHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHH-HHHhhccccccccccccc-ccccccchhhhhccCCCCEE
Confidence            44568999997 9999999999999999999999974321 11110        01110 11222234588899999999


Q ss_pred             EECCC
Q 015872          153 IDCAT  157 (399)
Q Consensus       153 i~~a~  157 (399)
                      |.+..
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            99865

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0011  Score=54.04  Aligned_cols=77  Identities=16%  Similarity=0.268  Sum_probs=59.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccc-------ccCCcEEEEccCCCCCcHHHHhcCCCE
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL-------RDWGATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l-------~~~~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      ..+.++|+|+|+ |..|++++..|.+.|. +++++.|+.+...+.+       ..........|+.+.+.+...+..+|.
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            345689999998 8899999999999985 7888888755433211       112455667888888888888899999


Q ss_pred             EEECCC
Q 015872          152 VIDCAT  157 (399)
Q Consensus       152 Vi~~a~  157 (399)
                      |||+..
T Consensus        94 iIN~Tp   99 (182)
T d1vi2a1          94 LTNGTK   99 (182)
T ss_dssp             EEECSS
T ss_pred             eccccC
Confidence            999986

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.83  E-value=0.00033  Score=56.30  Aligned_cols=72  Identities=33%  Similarity=0.387  Sum_probs=50.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC--CCcHHHH-hcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPAT-LVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~-~~~~d~Vi~~a~  157 (399)
                      ..|||+||+|-+|...++.....|.+|++++++.++ .+.++..+...+. |..|  .+.+... -+++|+||++.|
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~~~~lGad~vi-~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA-ADYLKQLGASEVI-SREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST-HHHHHHHTCSEEE-EHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH-HHHHHhhcccceE-eccchhchhhhcccCCCceEEEecCc
Confidence            459999999999999999988899999999998554 4445555654432 2221  1222111 136899999987

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.80  E-value=0.00096  Score=52.57  Aligned_cols=65  Identities=14%  Similarity=0.251  Sum_probs=46.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |+|.++|+ |.+|+++++.|++.| ++|.+.+|++++.....+..++... -|   .+    .+.++|+||-+.-
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~---~~----~v~~~Div~lavk   66 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-AT---LP----ELHSDDVLILAVK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SS---CC----CCCTTSEEEECSC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cc---cc----cccccceEEEecC
Confidence            67999987 999999999999887 9999999985544333333455433 22   22    2467899998753

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.00084  Score=54.04  Aligned_cols=72  Identities=14%  Similarity=0.186  Sum_probs=47.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCC--cEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..+.|+|+|.|+ |..+++++..|.+.|.+|+++.|+.++.........  ......++.+.     ....+|.||++..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp   88 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATS   88 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeecccc
Confidence            345689999997 888999999999999999999998544332221111  11112222221     1357899999986

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.68  E-value=0.00058  Score=54.91  Aligned_cols=73  Identities=26%  Similarity=0.294  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..+|+|+|++|-+|..++..+...| .+|++.+++ ++..+.+++.+...+ .|..+.+...+..     .++|+||+++
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~-~~~~~~~~~~Ga~~~-i~~~~~~~~~~~~~~~~~~~~d~vid~~  105 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-EEAVEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDLN  105 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-HHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccc-hhhHHHHHHcCCcee-eccCCcCHHHHHHHHhhcccchhhhccc
Confidence            3579999999999999999999888 588888876 334444455565432 3444544444443     2589999998


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       106 g  106 (170)
T d1jvba2         106 N  106 (170)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.67  E-value=0.0039  Score=50.46  Aligned_cols=63  Identities=14%  Similarity=0.210  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      ...++|.|+|. |.||+.+++.|..-|.+|.+.+|...+.              +..-.+++.++++.+|+|+.+...
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~--------------~~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG--------------PWRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS--------------SSCCBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccc--------------ceeeeechhhhhhccchhhccccc
Confidence            55789999996 9999999999999999999999874321              111234688999999999987763

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.53  E-value=0.0008  Score=54.36  Aligned_cols=73  Identities=21%  Similarity=0.253  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~----~~~d~Vi~~a~  157 (399)
                      ..+|+|+|+ |.+|...+..+...|.+++++....+...+..++.+...+ .|..+.+..+++.    .++|+||.|.|
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~-i~~~~~~~~~~i~~~t~gg~D~vid~~G  105 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV-INSKTQDPVAAIKEITDGGVNFALESTG  105 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEE-EeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence            457999997 9999999999988887765554433444444455565332 3555544333222    25899999987

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.53  E-value=0.0028  Score=50.79  Aligned_cols=66  Identities=17%  Similarity=0.303  Sum_probs=43.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      |++.||.|.|. |++|+..++.|.+. +.++.++.....+...     .......     .++.....++|+|+.+.+
T Consensus         1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-----KTPVFDV-----ADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-----SSCEEEG-----GGGGGTTTTCSEEEECSC
T ss_pred             CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccccc-----ccccccc-----hhhhhhccccceEEEeCC
Confidence            45678999995 99999999999876 6787766654333221     1111111     223445568999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.0014  Score=53.24  Aligned_cols=73  Identities=16%  Similarity=0.230  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCC--cHHH-Hh-----cCCCEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE--TIPA-TL-----VGVHTVI  153 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~--~l~~-~~-----~~~d~Vi  153 (399)
                      ..+|||+|+ |-+|...++.+...|. +|+++++++. ..+..++.+...+ .|..+.+  +..+ +.     .++|+||
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~Dvvi  105 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN-RLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFIL  105 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH-HHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccc-cccccccccceEE-EeccccchHHHHHHHHHhhCCCCceEEe
Confidence            468999997 9999999999999997 7999998743 3344455565332 3444432  1212 22     2689999


Q ss_pred             ECCCC
Q 015872          154 DCATG  158 (399)
Q Consensus       154 ~~a~~  158 (399)
                      .+.|.
T Consensus       106 d~vG~  110 (182)
T d1vj0a2         106 EATGD  110 (182)
T ss_dssp             ECSSC
T ss_pred             ecCCc
Confidence            99873

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.39  E-value=0.0024  Score=51.33  Aligned_cols=74  Identities=19%  Similarity=0.185  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      ..+|+|.|+ |.+|...++.+...|..+++.+...++..+..++.+...+.-.-.+.+.+.+.+     .++|+||.+.|
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G  107 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG  107 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence            457999998 678999999999999654444443355555555666555432222334454444     37999999987

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.00057  Score=55.99  Aligned_cols=72  Identities=15%  Similarity=0.136  Sum_probs=47.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEE-ecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~-~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a~  157 (399)
                      .+|||+||+|-+|...++.+...|.++++. +++.++........+... ..|..+++ +.+.+     +++|+||++.|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~-vi~~~~~~-~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA-AVNYKTGN-VAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE-EEETTSSC-HHHHHHHHCTTCEEEEEESSC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE-Eeeccchh-HHHHHHHHhccCceEEEecCC
Confidence            579999999999999999988899765554 444333332223344432 33555443 22222     26999999987

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.33  E-value=0.0019  Score=52.63  Aligned_cols=96  Identities=17%  Similarity=0.129  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc----------cCC----------cEEEEccCCCCCcH
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWG----------ATVVNADLSKPETI  142 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~----------~~~----------v~~~~~Dl~d~~~l  142 (399)
                      -++|.|+|| |.+|+.++..++..|++|++++++.+.....+.          ..+          ...+.... +.   
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~-~~---   78 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTL-SY---   78 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEES-SS---
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccc-cc---
Confidence            367999998 999999999999999999999997432111100          000          00011111 11   


Q ss_pred             HHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       143 ~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                       +.+.++|.||-++.         -|+...+.++....+.--+..|+.|+.
T Consensus        79 -~~~~~adlViEav~---------E~l~~K~~lf~~l~~~~~~~~IiaSnT  119 (186)
T d1wdka3          79 -GDFGNVDLVVEAVV---------ENPKVKQAVLAEVENHVREDAILASNT  119 (186)
T ss_dssp             -TTGGGCSEEEECCC---------SCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred             -ccccccceeeeeec---------chHHHHHHHHHHHHhhcCCCeeEEecc
Confidence             23568899999876         344556677777776654445555543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.31  E-value=0.0039  Score=50.02  Aligned_cols=73  Identities=23%  Similarity=0.283  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC----------------------CC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK----------------------PE  140 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d----------------------~~  140 (399)
                      +-+|+|+|| |..|..-++.....|.+|.+++.+.. ..+.+++.+-.++..+..+                      .+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~-~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAA-TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCST-THHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHH-HHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            347999998 99999999999999999999999744 3344555555554433221                      12


Q ss_pred             cHHHHhcCCCEEEECCC
Q 015872          141 TIPATLVGVHTVIDCAT  157 (399)
Q Consensus       141 ~l~~~~~~~d~Vi~~a~  157 (399)
                      .+.+.+..+|.||-++-
T Consensus       107 ~l~~~l~~aDlVI~tal  123 (183)
T d1l7da1         107 AVLKELVKTDIAITTAL  123 (183)
T ss_dssp             HHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHhhhhheeeee
Confidence            35556778999998875

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.29  E-value=0.00058  Score=54.24  Aligned_cols=97  Identities=14%  Similarity=0.267  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccC---CcEEEEccCCCCCcHHHHhcCCCEEEECCC-
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW---GATVVNADLSKPETIPATLVGVHTVIDCAT-  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~---~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~-  157 (399)
                      .+-+|+|+|+ |..|..-++.+...|-+|.+++.+.+.. +.++..   .++..   ..+.+.+.+.++++|+||.++- 
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l-~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aali  105 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLV  105 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH-HHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeec
Confidence            3468999998 9999999999999999999999974432 222221   23333   3446678899999999999985 


Q ss_pred             --CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          158 --GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       158 --~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                        ...+..+       ++.+++.++.-.  -+|=++.
T Consensus       106 pG~~aP~lI-------t~~mv~~Mk~GS--VIVDvai  133 (168)
T d1pjca1         106 PGRRAPILV-------PASLVEQMRTGS--VIVDVAV  133 (168)
T ss_dssp             TTSSCCCCB-------CHHHHTTSCTTC--EEEETTC
T ss_pred             CCcccCeee-------cHHHHhhcCCCc--EEEEeec
Confidence              1222221       556666655533  3665554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.16  E-value=0.0013  Score=53.11  Aligned_cols=73  Identities=21%  Similarity=0.217  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHH---HHh--cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP---ATL--VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~---~~~--~~~d~Vi~~a  156 (399)
                      ..+|+|+|+ |-+|...++.+...|. +|+++++++ ++.+..++.|...+ .|..+.+..+   +..  .++|+||.++
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~-~r~~~a~~lGa~~~-i~~~~~~~~~~v~~~t~g~G~D~vid~~  104 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP-ICVEAAKFYGATDI-LNYKNGHIEDQVMKLTNGKGVDRVIMAG  104 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH-HHHHHHHHHTCSEE-ECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccchh-hhHHHHHhhCcccc-ccccchhHHHHHHHHhhccCcceEEEcc
Confidence            356999986 9999999999998996 788888864 33333444564332 3444433332   222  2599999999


Q ss_pred             CC
Q 015872          157 TG  158 (399)
Q Consensus       157 ~~  158 (399)
                      |.
T Consensus       105 g~  106 (174)
T d1jqba2         105 GG  106 (174)
T ss_dssp             SC
T ss_pred             CC
Confidence            83

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.12  E-value=0.0071  Score=48.61  Aligned_cols=36  Identities=22%  Similarity=0.445  Sum_probs=32.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP  120 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~  120 (399)
                      |+|-|+|- |..|..+++.|++.||+|.+.+|++++.
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            57999985 9999999999999999999999975543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.06  E-value=0.0074  Score=48.37  Aligned_cols=73  Identities=16%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..+|+|.|+ |.+|...+..+...| .+|++.+++ ++..+...+.+.....-+-...+.+.+..     .++|+||.+.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~-~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~  106 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN-KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI  106 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCc-HHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence            467999999 669999999999987 578888876 44444455556554433222233444333     3799999998


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       107 G  107 (176)
T d2jhfa2         107 G  107 (176)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0044  Score=49.52  Aligned_cols=98  Identities=19%  Similarity=0.235  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEc-cCCCCCcHHHHh-----cCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNA-DLSKPETIPATL-----VGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~-Dl~d~~~l~~~~-----~~~d~Vi~~  155 (399)
                      ..+|+|+|+ |-+|...+..+...|. +|++.++++. +.+..++.+.+.+.. +-.+.....+.+     .++|+||.+
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~-rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~  104 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT-RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC  104 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH-HHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH-HHHHHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence            357999987 9999999999999998 7999888743 333444556544332 222333333333     268999999


Q ss_pred             CCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       156 a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      .|..          ......++.++..  .++++++...
T Consensus       105 ~G~~----------~~~~~a~~~~~~g--G~iv~~G~~~  131 (171)
T d1pl8a2         105 TGAE----------ASIQAGIYATRSG--GTLVLVGLGS  131 (171)
T ss_dssp             SCCH----------HHHHHHHHHSCTT--CEEEECSCCC
T ss_pred             cCCc----------hhHHHHHHHhcCC--CEEEEEecCC
Confidence            9821          1122233443333  3788887543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.02  E-value=0.0048  Score=45.94  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++|+|+|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999998 9999999999999999999999874

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.0028  Score=43.34  Aligned_cols=52  Identities=21%  Similarity=0.277  Sum_probs=39.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK  138 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d  138 (399)
                      +|+|.|.|| |.+|+-++....+.|++|++++-+...+....   ...++..+..+
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~---a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF---QQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG---GGSEEEESSSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCccccc---ccceEEEeecc
Confidence            478999997 99999999999999999999998754443222   23455555554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.99  E-value=0.0019  Score=53.15  Aligned_cols=32  Identities=19%  Similarity=0.132  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |||.|+| .||+|..++..| ++||+|++++-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            6899997 699999998755 5799999999863

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.98  E-value=0.0061  Score=48.79  Aligned_cols=69  Identities=16%  Similarity=0.192  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccc---c-CCcEEEEccCCCCCcHHHHhcCCCEEEECC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D-WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~---~-~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      ...++|+|.|+ |..|++++..|.+.+.+|+++.|+.++......   . ..+....-|-.       .+..+|.||++.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~t   87 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINAT   87 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeecc
Confidence            45688999997 888999999999988999999998543322111   1 12333333311       246789999998


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      +
T Consensus        88 p   88 (171)
T d1p77a1          88 S   88 (171)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.95  E-value=0.0026  Score=50.86  Aligned_cols=66  Identities=14%  Similarity=0.327  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ..++|+|+|+ |..|++++..|.+.|. +|.++.|+.++........+...+. ++.        ...+|.|||+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~-~~~--------~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN-SLE--------NQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES-CCT--------TCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh-ccc--------ccchhhheeccc
Confidence            3578999997 9999999999999995 7999999854433222222333321 111        146799999876

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.94  E-value=0.013  Score=46.67  Aligned_cols=100  Identities=18%  Similarity=0.263  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCC-CccccccCCcEEEEcc-----------CCCCCcHHHHhcC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPA-PADFLRDWGATVVNAD-----------LSKPETIPATLVG  148 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~-~~~~l~~~~v~~~~~D-----------l~d~~~l~~~~~~  148 (399)
                      |++||.|-|- |.||+.+++.|.+++ .+|.++.-..+. ....+...+...+..+           +.....+..++++
T Consensus         1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence            3578999995 999999999998764 666665532222 1222223333333322           1223456667789


Q ss_pred             CCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          149 VHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       149 ~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +|+||.|.|..           -+..-++.-.++|+ +.|++|...
T Consensus        80 vDvViEcTG~f-----------~~~~~~~~hl~~G~-k~Vi~s~~~  113 (172)
T d2czca2          80 VDIIVDATPGG-----------IGAKNKPLYEKAGV-KAIFQGGEK  113 (172)
T ss_dssp             CSEEEECCSTT-----------HHHHHHHHHHHHTC-EEEECTTSC
T ss_pred             CCEEEECCCCC-----------CCHHHHHHHHHcCC-CEEEECCCC
Confidence            99999999832           13334455566787 556666543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.91  E-value=0.0058  Score=45.82  Aligned_cols=35  Identities=23%  Similarity=0.426  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .++|+|+|| |++|-.++..|.++|.+|+++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            478999997 99999999999999999999999753

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.88  E-value=0.0051  Score=50.40  Aligned_cols=66  Identities=15%  Similarity=0.097  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|.|+|- |.||+.+++.|..-|.+|++.++.......           .+....+++.++++.+|+|+.+..
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-----------~~~~~~~~l~~~l~~sDii~~~~p  105 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE-----------KKGYYVDSLDDLYKQADVISLHVP  105 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH-----------HTTCBCSCHHHHHHHCSEEEECSC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc-----------cceeeeccccccccccccccccCC
Confidence            455789999995 999999999999999999999875332111           112234568999999999887775

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.87  E-value=0.01  Score=48.43  Aligned_cols=70  Identities=17%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +.....++|.|+|. |.||+.+++.|..-|.+|.+.++........  .       .++...+++.++++.+|+|+.+..
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--~-------~~~~~~~~l~~ll~~sD~i~~~~p  113 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVER--A-------LGLQRVSTLQDLLFHSDCVTLHCG  113 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHH--H-------HTCEECSSHHHHHHHCSEEEECCC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchh--h-------hccccccchhhccccCCEEEEeec
Confidence            34566789999996 9999999999999999999999864432211  1       122234568889999998877665

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.80  E-value=0.005  Score=48.87  Aligned_cols=72  Identities=22%  Similarity=0.335  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHH---HhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA---TLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~---~~~~~d~Vi~~a~  157 (399)
                      ..+|+|.|+ |.+|...++.+...|.+|+++++++.+ .+..++.+.+.+ .|..+.+..+.   ...+.+.+|.+++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~-~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK-LELARKLGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH-HHhhhccCcccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence            467999886 999999999998999999999987433 334445555332 34544443332   2335666666654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.78  E-value=0.012  Score=47.15  Aligned_cols=73  Identities=18%  Similarity=0.180  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..+|+|+|+ |-+|...+..+...|. .|++.+++ +.+.+..++.+...+.-.....+......     .++|+||.|+
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~-~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~  106 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDIN-GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA  106 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccc-hHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence            457999986 9999999999999997 56666766 44444455566544432222222333332     3799999999


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       107 G  107 (174)
T d1e3ia2         107 G  107 (174)
T ss_dssp             C
T ss_pred             c
Confidence            8

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.76  E-value=0.006  Score=45.45  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++|+|+|| |++|-.++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478999998 9999999999999999999999964

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=95.76  E-value=0.034  Score=42.35  Aligned_cols=106  Identities=15%  Similarity=0.077  Sum_probs=68.0

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        83 ~~~vlVtGat---G~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      .++|.|+|||   +..|..+++.|.+.||++..+.-+. +...         +.+.. -..++.++-..+|.|+-+..  
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~-~~~~---------i~g~~-~~~~l~~i~~~iD~v~v~~p--   79 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF-QGEE---------LFGEE-AVASLLDLKEPVDILDVFRP--   79 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG-TTSE---------ETTEE-CBSSGGGCCSCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc-ccce---------eecee-cccchhhccCCCceEEEecc--
Confidence            4689999998   5799999999999999988765432 1111         11111 11223333346899888864  


Q ss_pred             CCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       160 ~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                               -.....+++.|.+.|++.+++-+ .. ..          .++.+..++.|++++
T Consensus        80 ---------~~~v~~~v~~~~~~g~k~i~~q~-G~-~~----------~e~~~~a~~~Gi~vV  121 (136)
T d1iuka_          80 ---------PSALMDHLPEVLALRPGLVWLQS-GI-RH----------PEFEKALKEAGIPVV  121 (136)
T ss_dssp             ---------HHHHTTTHHHHHHHCCSCEEECT-TC-CC----------HHHHHHHHHTTCCEE
T ss_pred             ---------HHHHHHHHHHHHhhCCCeEEEec-Cc-cC----------HHHHHHHHHcCCEEE
Confidence                     23355677888888997655433 22 11          145677888999876

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.74  E-value=0.012  Score=45.72  Aligned_cols=35  Identities=17%  Similarity=0.419  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r  115 (399)
                      .++.++|||+|| |.+|..-++.|++.|.+|+++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            356789999999 99999999999999999999975

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.73  E-value=0.0067  Score=45.53  Aligned_cols=34  Identities=18%  Similarity=0.303  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++++|+|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            578999998 9999999999999999999999864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.0071  Score=44.93  Aligned_cols=34  Identities=24%  Similarity=0.267  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++|+|+|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999998 9999999999999999999999974

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.64  E-value=0.012  Score=44.32  Aligned_cols=93  Identities=15%  Similarity=0.215  Sum_probs=63.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCCCCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATGRPE  161 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~-~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~~~~~  161 (399)
                      .+|+|.|| |.+|..|++.+.. .||++.++.-+.++... ..-.|+.++.     .+.+.+..+ .++.++.+..    
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G-~~I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~----   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVG-RPVRGGVIEH-----VDLLPQRVPGRIEIALLTVP----   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTT-CEETTEEEEE-----GGGHHHHSTTTCCEEEECSC----
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcC-CEECCEEEec-----HHHHHHHHhhcccEEEEeCC----
Confidence            47999997 9999999998764 47999998876444321 1112565553     344666554 4666666654    


Q ss_pred             CcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       162 ~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                             -.....+++.|.++|++.+..++...
T Consensus        73 -------~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 -------REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             -------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             -------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence                   13456799999999998888776544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.59  E-value=0.01  Score=44.48  Aligned_cols=34  Identities=18%  Similarity=0.308  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      .++|+|+|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            478999997 9999999999999999999999864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.57  E-value=0.0094  Score=44.46  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++++|+|| |+||-.++..|.+.|.+|+++.|..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            578999998 9999999999999999999999874

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.018  Score=45.34  Aligned_cols=56  Identities=16%  Similarity=0.179  Sum_probs=44.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +...|+|+|+|-+..+|..++..|.++|..|+.......                      .+.+..+.+|+||.++|
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------~l~~~~~~ADivI~a~G   89 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------NLRHHVENADLLIVAVG   89 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------CHHHHHHHCSEEEECSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------hhHHHHhhhhHhhhhcc
Confidence            556799999999999999999999999999988766432                      24445566677777766

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.53  E-value=0.008  Score=45.08  Aligned_cols=33  Identities=33%  Similarity=0.422  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      +++++|+|| |+||-.++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            467999998 999999999999999999999986

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.47  E-value=0.025  Score=45.28  Aligned_cols=96  Identities=11%  Similarity=0.184  Sum_probs=57.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEecCCCCCc-cccccCCcEEE----------EccCCCCCcHHHHhcCCCE
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPA-DFLRDWGATVV----------NADLSKPETIPATLVGVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~r~~~~~~-~~l~~~~v~~~----------~~Dl~d~~~l~~~~~~~d~  151 (399)
                      -||.|-| .|.||+.+++.|.++ +.+|.++....+... ..+...+....          ...+.-...+..++.++|+
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi   80 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI   80 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence            4799998 699999999999987 477777764322211 11111111110          0112223456777788999


Q ss_pred             EEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       152 Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      ||.|.|..           .+..-++...+.|. ++|+.++
T Consensus        81 ViecTG~f-----------~~~e~a~~hl~~G~-KvIi~~~  109 (178)
T d1b7go1          81 VVDTTPNG-----------VGAQYKPIYLQLQR-NAIFQGG  109 (178)
T ss_dssp             EEECCSTT-----------HHHHHHHHHHHTTC-EEEECTT
T ss_pred             EEECCCCc-----------CCHHHHHHHHHcCC-EEEEECC
Confidence            99999832           12334455556674 6776544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.47  E-value=0.0088  Score=44.28  Aligned_cols=34  Identities=24%  Similarity=0.360  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++++|+|| |++|-.++..|.+.|++|+++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478999997 9999999999999999999999863

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0097  Score=44.80  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++|+|+|| |++|-.++..|.+.|.+|+++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999998 9999999999999999999999974

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.37  E-value=0.0093  Score=44.68  Aligned_cols=33  Identities=21%  Similarity=0.535  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ++|+|+|| |++|-.++..|.+.|++|+++.|.+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            67999998 9999999999999999999999864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.032  Score=44.06  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCC
Q 015872           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (399)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~  119 (399)
                      .+...|+|+|+|-+..+|..++..|+++|..|.........
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            35678999999999999999999999999999988876433

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.29  E-value=0.06  Score=45.36  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~  116 (399)
                      ..+|+|+|+ |.+|++++..|+..|. ++++++.+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            468999996 8899999999999995 67777764

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.27  E-value=0.016  Score=47.25  Aligned_cols=107  Identities=15%  Similarity=0.071  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHH---Hhc--CCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA---TLV--GVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~---~~~--~~d~Vi~~a  156 (399)
                      ..+|+|+|+ |-+|...+..+...|. +|++.+++ +.+.+..+..+...+. |..+.+...+   ...  ++|++|.+.
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~-~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~v  102 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN-PARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAV  102 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-HHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc-chhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence            458999986 9999888888877776 67777776 4444555666776543 4444332222   222  689999999


Q ss_pred             CCC-CCCcchhccHHHHHHHHHHHHHc-C-CcEEEEecc
Q 015872          157 TGR-PEEPIKKVDWEGKVALIQCAKAM-G-IQKYVFYSI  192 (399)
Q Consensus       157 ~~~-~~~~~~~~n~~~~~~l~~aa~~~-~-v~~~V~~Ss  192 (399)
                      |.. ........+..+....++.+.+. + -.+++.++-
T Consensus       103 G~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~  141 (195)
T d1kola2         103 GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL  141 (195)
T ss_dssp             CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             cccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeee
Confidence            832 22222222223333344444332 1 126776664

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.21  E-value=0.013  Score=49.41  Aligned_cols=34  Identities=26%  Similarity=0.466  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      .++|+|+|| |..|..++..|.++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999998 9999999999999999999999863

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.20  E-value=0.013  Score=44.58  Aligned_cols=35  Identities=20%  Similarity=0.396  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .++|+|+|| |++|-.++..|.+.|.+|+++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            478999997 99999999999999999999999743

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.13  E-value=0.024  Score=45.88  Aligned_cols=69  Identities=16%  Similarity=0.118  Sum_probs=50.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|.|+|. |.||..+++.|..-|.+|...+|...+... ...       ..+....++.+.++.+|+|+.+..
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-~~~-------~~~~~~~~l~~~l~~sD~v~~~~p  109 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESV-EKE-------LNLTWHATREDMYPVCDVVTLNCP  109 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHH-HHH-------HTCEECSSHHHHGGGCSEEEECSC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccc-ccc-------ccccccCCHHHHHHhccchhhccc
Confidence            455788999995 999999999999999999999986433211 111       112234668889999999977665

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.13  E-value=0.018  Score=46.11  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCc-HHHH---h--cCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPAT---L--VGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~-l~~~---~--~~~d~Vi~~  155 (399)
                      ..+|+|+|+ |-+|...+..+...| .+|++++++.++ .+..++.+...+. |..+.+. ....   .  .++|+||.+
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~k-l~~Ak~~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi~~  106 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDK-FEKAMAVGATECI-SPKDSTKPISEVLSEMTGNNVGYTFEV  106 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHHTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHH-HHHHHhcCCcEEE-CccccchHHHHHHHHhccccceEEEEe
Confidence            457999986 999999999999998 579999987443 3333444554433 3333332 2222   2  379999999


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      .+
T Consensus       107 ~g  108 (176)
T d1d1ta2         107 IG  108 (176)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.08  E-value=0.023  Score=46.46  Aligned_cols=65  Identities=9%  Similarity=0.005  Sum_probs=49.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|.|+|. |.||+.+++.|..-|.+|++.++.......    ..+        +..++.++++.+|+|+.+..
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~--------~~~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----PDF--------DYVSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC----TTC--------EECCHHHHHHHCSEEEECCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchhhh----cch--------hHHHHHHHHHhcccceeeec
Confidence            455689999996 999999999999999999999986443211    111        12458888999999887765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.02  E-value=0.028  Score=45.03  Aligned_cols=36  Identities=28%  Similarity=0.343  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ..+|+|+|+|| |..|-..+..|.++||+|+++.+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            34689999998 9999999999999999999999864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.02  E-value=0.018  Score=46.76  Aligned_cols=69  Identities=14%  Similarity=0.183  Sum_probs=50.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....++|.|+|. |.||+.+++.|..-|.+|...++..........        ......+++.++++.+|+|+.+..
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~p  112 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAP  112 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCC
Confidence            455789999996 999999999999999999999886443222111        111224568899999999877665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.015  Score=45.69  Aligned_cols=68  Identities=10%  Similarity=0.013  Sum_probs=51.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      .+..|+|.|+| .|.||+.+++.|...|.+|.+..+++....+..         .|-.....+.+++...|+||-+.|
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~---------~dG~~v~~~~~a~~~adivvtaTG   88 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA---------MEGYEVTTMDEACQEGNIFVTTTG   88 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---------HTTCEECCHHHHTTTCSEEEECSS
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh---------cCceEeeehhhhhhhccEEEecCC
Confidence            34568899998 699999999999999999999998743322111         222223347788899999999887

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.94  E-value=0.042  Score=44.32  Aligned_cols=95  Identities=17%  Similarity=0.117  Sum_probs=61.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~  159 (399)
                      ....++|.|+|- |.||..+++.|..-|.+|...++.......     .       ....+++.++++.+|+|+.+....
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----~-------~~~~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG-----N-------ATQVQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----T-------CEECSCHHHHHHHCSEEEECCCSS
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh-----h-------hhhhhhHHHHHhhccceeecccCC
Confidence            345688999985 999999999999999999999986433211     1       111246889999999998877633


Q ss_pred             CC-CcchhccHHHHHHHHHHHHHcCCcEEEEecccCC
Q 015872          160 PE-EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (399)
Q Consensus       160 ~~-~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~  195 (399)
                      +. ..+      -....++.+++ + .-||.+|=...
T Consensus       108 ~~T~~l------i~~~~l~~mk~-~-a~lIN~aRG~l  136 (188)
T d1sc6a1         108 PSTKNM------MGAKEISLMKP-G-SLLINASRGTV  136 (188)
T ss_dssp             TTTTTC------BCHHHHHHSCT-T-EEEEECSCSSS
T ss_pred             cchhhh------ccHHHHhhCCC-C-CEEEEcCcHHh
Confidence            22 111      12345555543 2 25677664443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.082  Score=48.33  Aligned_cols=71  Identities=13%  Similarity=0.210  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcc----------ccc----------------cCCcEEEEcc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------FLR----------------DWGATVVNAD  135 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~----------~l~----------------~~~v~~~~~D  135 (399)
                      ..||||+|+ |.+|..+++.|+..|. ++++++.+.-....          .+.                ...+..+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            457999998 7799999999999996 78888875322110          000                0135556666


Q ss_pred             CCCCCcHHHHhcCCCEEEECC
Q 015872          136 LSKPETIPATLVGVHTVIDCA  156 (399)
Q Consensus       136 l~d~~~l~~~~~~~d~Vi~~a  156 (399)
                      +.+..  ...++++|+||.+.
T Consensus       116 i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECC
T ss_pred             ccchH--HHHHHhcchheecc
Confidence            65433  46788999999886

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.83  E-value=0.012  Score=44.11  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      +++++|+|| |++|-.++..|.+.|.+|+++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            478999998 99999999999999999999999743

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.81  E-value=0.018  Score=47.08  Aligned_cols=69  Identities=20%  Similarity=0.296  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~~  158 (399)
                      +...++|.|.| -|.+|+++++.|.+.|.+|++.+.+.... ......+.+.+        ...+++. .+|+++-||..
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~-~~~~~~g~~~~--------~~~~~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERV-AHAVALGHTAV--------ALEDVLSTPCDVFAPCAMG   93 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCEEC--------CGGGGGGCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHH-HHHHhhccccc--------Cccccccccceeeeccccc
Confidence            56778999998 59999999999999999999888753322 12222333332        1234454 79999999863

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.78  E-value=0.014  Score=47.07  Aligned_cols=34  Identities=21%  Similarity=0.337  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~  117 (399)
                      ++||+|+|| |..|-..+..|.++|+ +|+++.|++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            478999998 9999999999999998 599999863

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.71  E-value=0.032  Score=44.40  Aligned_cols=72  Identities=18%  Similarity=0.193  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCC-cHHHHh-----cCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE-TIPATL-----VGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~-~l~~~~-----~~~d~Vi~~  155 (399)
                      ..+|+|+|+ |-+|...++.+...|. +|++.+++ +++.+..+..+.+.+. |..+.+ .+.+..     .++|+||.+
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~-~~kl~~a~~lGa~~~i-~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTH-KDKFPKAIELGATECL-NPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-GGGHHHHHHTTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCCh-HHHHHHHHHcCCcEEE-cCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            467999996 9999999999999985 68888886 4444444556655442 333332 233332     379999999


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      ++
T Consensus       105 ~g  106 (174)
T d1p0fa2         105 AG  106 (174)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.67  E-value=0.02  Score=46.25  Aligned_cols=67  Identities=15%  Similarity=0.126  Sum_probs=49.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      ....+++.|+|. |.||+.+++.|..-|.+|.+.++...+...  ...++        ...++.++++.+|+|+.+..
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~~~--------~~~~l~ell~~sDiv~~~~P  107 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQLGI--------ELLSLDDLLARADFISVHLP  107 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHHTC--------EECCHHHHHHHCSEEEECCC
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHH--hhcCc--------eeccHHHHHhhCCEEEEcCC
Confidence            445688999985 999999999999999999999886432211  11122        12458889999999887766

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.61  E-value=0.014  Score=46.01  Aligned_cols=72  Identities=22%  Similarity=0.292  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCC---cHHHHhcCCCEEEECCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATLVGVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~---~l~~~~~~~d~Vi~~a~  157 (399)
                      ..+|+|.|+ |-+|...+..+...|.+|+++++++. ..+..+..++..+... .+.+   .+.+.-.+.+.+|.+++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~-r~~~~k~~Ga~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE-KLELAKELGADLVVNP-LKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH-HHHHHHHTTCSEEECT-TTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH-HhhhhhhcCcceeccc-ccchhhhhcccccCCCceEEeecC
Confidence            357999875 99999999999999999999998743 4445566676655433 3322   23333456677777665

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.57  E-value=0.018  Score=45.85  Aligned_cols=71  Identities=21%  Similarity=0.238  Sum_probs=46.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-----cCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-----~~~d~Vi~~a  156 (399)
                      ..+|+|.|+ |.+|...++.+...|. .|++.+++ +...+..++.+...+ .|.. .+.+....     .++|+||.++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~-~~k~~~~~~~ga~~~-i~~~-~~~~~~~~~~~~~~g~d~vid~~  108 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK-EEKLKLAERLGADHV-VDAR-RDPVKQVMELTRGRGVNVAMDFV  108 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS-HHHHHHHHHTTCSEE-EETT-SCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch-hHHHHHHhhccccee-ecCc-ccHHHHHHHhhCCCCceEEEEec
Confidence            357999886 9999999999888885 56666665 344444455554322 2332 23333333     2689999999


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      |
T Consensus       109 g  109 (172)
T d1h2ba2         109 G  109 (172)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.54  E-value=0.02  Score=43.02  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +++++|+|| |+||-.++..|.+.|.+|+++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478999998 9999999999999999999999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.47  E-value=0.033  Score=44.10  Aligned_cols=81  Identities=12%  Similarity=0.103  Sum_probs=53.0

Q ss_pred             CCCCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCC-cEEEEccC--CCCCcHHHHhcCCCEEEE
Q 015872           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG-ATVVNADL--SKPETIPATLVGVHTVID  154 (399)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~-v~~~~~Dl--~d~~~l~~~~~~~d~Vi~  154 (399)
                      +.+...|+|+|+|-+.-+|..++..|+++|..|.....+............ ......|+  ..++.+.+....+|+||.
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            346678999999999999999999999999999877754221100000000 01112222  123457777778999999


Q ss_pred             CCCC
Q 015872          155 CATG  158 (399)
Q Consensus       155 ~a~~  158 (399)
                      .+|.
T Consensus       104 avG~  107 (171)
T d1edza1         104 GVPS  107 (171)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            8883

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.47  E-value=0.024  Score=47.93  Aligned_cols=34  Identities=29%  Similarity=0.305  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      .+||+|+|| |..|..++..|.++|++|+++.|+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            478999998 9999999999999999999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.38  E-value=0.016  Score=46.99  Aligned_cols=98  Identities=16%  Similarity=0.278  Sum_probs=60.1

Q ss_pred             CeEEE-EcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcc---ccccCCcEEE-EccCCCCCc----HHHHh----cCCC
Q 015872           84 TSILV-VGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDWGATVV-NADLSKPET----IPATL----VGVH  150 (399)
Q Consensus        84 ~~vlV-tGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~---~l~~~~v~~~-~~Dl~d~~~----l~~~~----~~~d  150 (399)
                      .+|+| .||+|.+|...++.....|.+|++++|+.++..+   .++..+...+ .-|-.+...    +.+..    .++|
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCce
Confidence            45777 5899999999999998899999999987665432   2344454433 222112222    22221    3689


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +||++.|.           ......++.++..  .++|.++..+
T Consensus       110 vv~D~vg~-----------~~~~~~~~~l~~~--G~~v~~G~~~  140 (189)
T d1gu7a2         110 LALNCVGG-----------KSSTGIARKLNNN--GLMLTYGGMS  140 (189)
T ss_dssp             EEEESSCH-----------HHHHHHHHTSCTT--CEEEECCCCS
T ss_pred             EEEECCCc-----------chhhhhhhhhcCC--cEEEEECCcc
Confidence            99999871           1123344444333  3788877554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.36  E-value=0.022  Score=50.15  Aligned_cols=34  Identities=32%  Similarity=0.469  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +|+|+|+|| |.-|..++..|.++|++|.++.++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            589999997 9999999999999999999999863

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.19  Score=36.80  Aligned_cols=90  Identities=13%  Similarity=0.104  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCC----------hhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCC
Q 015872           83 PTSILVVGATG----------TLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG----------~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d  150 (399)
                      .++|||+|+..          |.+.+.++.|.+.|++++.+..+++...-...  -..-+-...-..+.+.++++  ++|
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E~p~   81 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIEKPK   81 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHhCCC
Confidence            57899999844          88999999999999999999887654322110  11122233334455666654  789


Q ss_pred             EEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCc
Q 015872          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ  185 (399)
Q Consensus       151 ~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~  185 (399)
                      .|+-..|.           +-..|+.....+.|++
T Consensus        82 ~ii~~~GG-----------Qtalnla~~L~~~gv~  105 (121)
T d1a9xa4          82 GVIVQYGG-----------QTPLKLARALEAAGVP  105 (121)
T ss_dssp             EEECSSST-----------HHHHTTHHHHHHTTCC
T ss_pred             EEEeehhh-----------hhHHHHHHHHHHcCCc
Confidence            88876653           2244556666777763

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.15  E-value=0.037  Score=40.96  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .++|+|+|| |++|-.++..|.+.|.+|.++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            478999997 99999999999999999999999743

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.77  E-value=0.028  Score=47.88  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=29.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|| |..|..++.+|+++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999998 9999999999999999999999863

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.59  E-value=0.063  Score=44.65  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ...++|+|+|| |..|-..+..|.++|++|+++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            35689999998 9999999999999999999998863

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.55  E-value=0.054  Score=42.95  Aligned_cols=70  Identities=14%  Similarity=0.153  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHHC----CCcEEEEecCCCCCcc---ccc----cC--CcEEEEccCCCCCcHHHHhc
Q 015872           83 PTSILVVGATGTLGRQ--IVRRALDE----GYDVRCLVRPRPAPAD---FLR----DW--GATVVNADLSKPETIPATLV  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~--lv~~L~~~----g~~V~~~~r~~~~~~~---~l~----~~--~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      .|||.|+|| |.+|+.  ++..|+..    +.++..+++++++...   .+.    ..  ..++..     ..+..++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhccc
Confidence            478999997 988875  44455543    4699999997443211   000    01  122222     234788999


Q ss_pred             CCCEEEECCCC
Q 015872          148 GVHTVIDCATG  158 (399)
Q Consensus       148 ~~d~Vi~~a~~  158 (399)
                      ++|+||..++.
T Consensus        76 dad~Vv~~~~~   86 (171)
T d1obba1          76 DADFVINTAMV   86 (171)
T ss_dssp             TCSEEEECCCT
T ss_pred             CCCeEeeeccc
Confidence            99999999873

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.55  E-value=0.031  Score=46.56  Aligned_cols=70  Identities=20%  Similarity=0.304  Sum_probs=48.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc-CCCEEEECCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATG  158 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vi~~a~~  158 (399)
                      +...++|+|-|- |.+|+++++.|.+.|.+|++.+.+...........+.+.+     +.+   +.+. .||+++-||-.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~---~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APN---AIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGG---GTTTCCCSEEEECSCS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCc---ccccccccEecccccc
Confidence            466789999995 9999999999999999999887653322222222233322     222   2333 79999999973

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.50  E-value=0.034  Score=47.65  Aligned_cols=32  Identities=22%  Similarity=0.319  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      |||+|+|| |.-|-..+..|.++|++|.++.++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            78999997 999999999999999999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.49  E-value=0.039  Score=48.03  Aligned_cols=35  Identities=26%  Similarity=0.397  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      .+++|+|+|| |..|-..+..|.++|++|.++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4679999997 9999999999999999999999863

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.32  E-value=0.079  Score=41.82  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCCccccccCCcEEEEccCCCCCc-HHHHh-----cCCCEEEEC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPATL-----VGVHTVIDC  155 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~-l~~~~-----~~~d~Vi~~  155 (399)
                      ..+|+|+|+ |-+|...+..+...| .+|++++++ +.+.+..++.+...+. |..+.+. ..+..     .++|+||.+
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~-~~rl~~a~~~GAd~~i-n~~~~~~~~~~~~~~~~~~G~d~vid~  105 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN-PDKFEKAKVFGATDFV-NPNDHSEPISQVLSKMTNGGVDFSLEC  105 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-GGGHHHHHHTTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecch-HHHHHHHHHcCCcEEE-cCCCcchhHHHHHHhhccCCcceeeee
Confidence            467999997 667777777777776 567778776 4445555666754433 4333322 22222     379999999


Q ss_pred             CC
Q 015872          156 AT  157 (399)
Q Consensus       156 a~  157 (399)
                      .|
T Consensus       106 ~G  107 (175)
T d1cdoa2         106 VG  107 (175)
T ss_dssp             SC
T ss_pred             cC
Confidence            88

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.13  Score=40.11  Aligned_cols=113  Identities=12%  Similarity=0.190  Sum_probs=63.6

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHC-CCcEEEEe-cCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQ-IVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~-lv~~L~~~-g~~V~~~~-r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~  160 (399)
                      ++|.|+|. |.+|.. .+..|... +.+|.++. ++...........++.     .  .+.+..+++++|+|+-+...  
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~--~~~~~~l~~~~D~V~I~tp~--   71 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----Y--ADSLSSLAASCDAVFVHSST--   71 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----B--CSSHHHHHTTCSEEEECSCT--
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----c--cccchhhhhhcccccccccc--
Confidence            58999995 999976 45556554 67877666 4433322222222322     2  33466667899999887641  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~i  223 (399)
                               .....++..+.++|. +++ +     +.+-..-....+... +..++.|..+.+
T Consensus        72 ---------~~h~~~~~~al~~gk-~V~-~-----EKPla~~~~e~~~l~-~~a~~~~~~~~v  117 (164)
T d1tlta1          72 ---------ASHFDVVSTLLNAGV-HVC-V-----DKPLAENLRDAERLV-ELAARKKLTLMV  117 (164)
T ss_dssp             ---------THHHHHHHHHHHTTC-EEE-E-----ESSSCSSHHHHHHHH-HHHHHTTCCEEE
T ss_pred             ---------hhccccccccccccc-eee-c-----cccccCCHHHHHHHH-HHHHHcCCcEEE
Confidence                     123456677777775 543 2     222222334444433 345667776654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.29  E-value=0.23  Score=39.00  Aligned_cols=98  Identities=21%  Similarity=0.276  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCCCC-ccccccCCcEEEEcc-----------CCCCCcHHHHhcCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNAD-----------LSKPETIPATLVGV  149 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~~~-~~~l~~~~v~~~~~D-----------l~d~~~l~~~~~~~  149 (399)
                      |++|.|-| -|.||+.+++.|..++ .+|.++.-..+.. ...+...+......+           +.-...+..++.++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            46899987 6999999999998875 5666555322221 111112222222211           11122456667899


Q ss_pred             CEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEeccc
Q 015872          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (399)
Q Consensus       150 d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~  193 (399)
                      |+||-|.|...           +..-++.-.++|+ ++|++|+.
T Consensus        80 DvViEcTG~f~-----------~~~~~~~hl~~G~-K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGI-----------GAKNLKMYKEKGI-KAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTH-----------HHHHHHHHHHTTC-EEEECTTS
T ss_pred             CEEEEccCCCC-----------CHHHHHHHHHcCC-CEEEECCC
Confidence            99999998321           2223344456687 56666654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.25  E-value=0.03  Score=40.62  Aligned_cols=38  Identities=18%  Similarity=0.087  Sum_probs=30.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      +...|+|+|+|+ |.-|.-++..|+..+-+|+.+.|...
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            445689999997 99999999999988877766666543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.23  E-value=0.035  Score=47.45  Aligned_cols=32  Identities=25%  Similarity=0.360  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      |+|+|+|| |.-|-..+..|.++|++|+++-++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            57999998 999999999999999999999986

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.20  E-value=0.084  Score=41.10  Aligned_cols=71  Identities=14%  Similarity=0.303  Sum_probs=40.4

Q ss_pred             CCeEEEEcCCChhHHHH-HHHHHHC-CCcEEEEe-cCCCCCc-cccccCCcEEEEccCCCCCcHHHH--hcCCCEEEECC
Q 015872           83 PTSILVVGATGTLGRQI-VRRALDE-GYDVRCLV-RPRPAPA-DFLRDWGATVVNADLSKPETIPAT--LVGVHTVIDCA  156 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~l-v~~L~~~-g~~V~~~~-r~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~--~~~~d~Vi~~a  156 (399)
                      +.||.|+| +|.+|+.+ .+.|.+. ..++.++. |+..... ...+..++.+...++   +++.+.  +.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~---d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGV---EGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHH---HHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccce---eeeeecccccccCEEEEcC
Confidence            35899999 89999865 4554443 45777765 5433221 222334554443322   223222  35789999975


Q ss_pred             C
Q 015872          157 T  157 (399)
Q Consensus       157 ~  157 (399)
                      .
T Consensus        80 p   80 (157)
T d1nvmb1          80 S   80 (157)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.03  E-value=0.0029  Score=51.04  Aligned_cols=69  Identities=17%  Similarity=0.288  Sum_probs=45.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCcccccc------CC--cEEEEccCCCCCcHHHHhcCCCEE
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WG--ATVVNADLSKPETIPATLVGVHTV  152 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~------~~--v~~~~~Dl~d~~~l~~~~~~~d~V  152 (399)
                      .+.|+|+|+|+ |..+++++..|.+.| +|.++.|+.++.......      ..  ..+-..|      +...+...|.|
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dli   87 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG------LDVDLDGVDII   87 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC------TTCCCTTCCEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhh------hhhccchhhhh
Confidence            45689999997 889999999998777 899999975443221110      00  0111122      22345578999


Q ss_pred             EECCC
Q 015872          153 IDCAT  157 (399)
Q Consensus       153 i~~a~  157 (399)
                      |++..
T Consensus        88 In~tp   92 (177)
T d1nvta1          88 INATP   92 (177)
T ss_dssp             EECSC
T ss_pred             ccCCc
Confidence            99976

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.01  E-value=0.079  Score=41.82  Aligned_cols=73  Identities=10%  Similarity=-0.027  Sum_probs=41.9

Q ss_pred             CeEEEEcC-CChhHHHHHHHHHHCC----CcEEEEecCCCCC-cccc--------ccCCcEEEEccCCCCCcHHHHhcCC
Q 015872           84 TSILVVGA-TGTLGRQIVRRALDEG----YDVRCLVRPRPAP-ADFL--------RDWGATVVNADLSKPETIPATLVGV  149 (399)
Q Consensus        84 ~~vlVtGa-tG~iG~~lv~~L~~~g----~~V~~~~r~~~~~-~~~l--------~~~~v~~~~~Dl~d~~~l~~~~~~~  149 (399)
                      +||.|+|| +.+.+..++..+....    -++..++.+.... .+.+        ...+..+....   ..+..++++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~---~td~~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee---cCCchhhcCCC
Confidence            68999997 3344555555555432    4888888864321 1111        11122222222   23467789999


Q ss_pred             CEEEECCCCC
Q 015872          150 HTVIDCATGR  159 (399)
Q Consensus       150 d~Vi~~a~~~  159 (399)
                      |+||.+++..
T Consensus        79 DvVv~ta~~~   88 (169)
T d1s6ya1          79 DFVTTQFRVG   88 (169)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEEccccC
Confidence            9999999843

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.78  E-value=0.059  Score=42.32  Aligned_cols=34  Identities=21%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--cEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~--~V~~~~r~~  117 (399)
                      .|||+|+|| |++|-.++..|.+.|+  +|+++.+.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            479999998 9999999999999875  678777653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=92.34  E-value=0.042  Score=43.27  Aligned_cols=114  Identities=14%  Similarity=0.154  Sum_probs=60.1

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHC-CCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHh-cCCCEEEECCCCCC
Q 015872           84 TSILVVGATGTLGRQ-IVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATGRP  160 (399)
Q Consensus        84 ~~vlVtGatG~iG~~-lv~~L~~~-g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-~~~d~Vi~~a~~~~  160 (399)
                      +||.|+|+ |.+|+. .+..|.+. +.++.++++++......-+..++..+..   |.+   +++ .++|+|+-+...  
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~---~ll~~~iD~V~I~tp~--   72 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT---DYR---DVLQYGVDAVMIHAAT--   72 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS---STT---GGGGGCCSEEEECSCG--
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc---cHH---Hhcccccceecccccc--
Confidence            58999996 888876 55666555 5677766665333222222223322222   222   233 378999887641  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~i  223 (399)
                               .....++..|.+.|. +++ +     +.+........+... +..++.+..+.+
T Consensus        73 ---------~~H~~~~~~al~~gk-~V~-~-----EKP~~~~~~e~~~l~-~~a~~~~~~~~v  118 (167)
T d1xeaa1          73 ---------DVHSTLAAFFLHLGI-PTF-V-----DKPLAASAQECENLY-ELAEKHHQPLYV  118 (167)
T ss_dssp             ---------GGHHHHHHHHHHTTC-CEE-E-----ESCSCSSHHHHHHHH-HHHHHTTCCEEE
T ss_pred             ---------ccccccccccccccc-ccc-c-----CCCCcCCHHHHHHHH-HHHHHcCCEEEE
Confidence                     123356666666775 432 2     333333334444433 345667776543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.25  E-value=0.051  Score=46.66  Aligned_cols=33  Identities=27%  Similarity=0.356  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      .+|+|+|| |-.|..++..|.+.|++|.++.|.+
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46999998 9999999999999999999999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.92  E-value=0.11  Score=40.21  Aligned_cols=34  Identities=9%  Similarity=0.200  Sum_probs=28.8

Q ss_pred             CeEEEE-cCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVV-GATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVt-GatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      +.++|+ .+.||+|..++..|.+.|++|+++.+..
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            456665 2459999999999999999999999964

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.80  E-value=0.077  Score=40.90  Aligned_cols=34  Identities=29%  Similarity=0.521  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~  116 (399)
                      +|+|.|.|+||-||....+-+.+.  .++|.+++=+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            589999999999999999998775  5888888754

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.79  E-value=0.11  Score=40.33  Aligned_cols=110  Identities=10%  Similarity=0.087  Sum_probs=60.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCCCCCCcc
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI  164 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~~~~~~~  164 (399)
                      ||.++|- |..|..+++.|++.|+.| +..|..++..+.....+..   .      ...+.+.++|.+|-+...      
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~i~~~~~------   64 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSE---A------VPLERVAEARVIFTCLPT------   64 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCE---E------CCGGGGGGCSEEEECCSS------
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCc---c------cccccccceeEEEecccc------
Confidence            5889996 999999999999999866 5667644433322221211   1      112344567877776541      


Q ss_pred             hhccHHHHHHHHHHHHHcC--CcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 015872          165 KKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVII  224 (399)
Q Consensus       165 ~~~n~~~~~~l~~aa~~~~--v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~il  224 (399)
                          ........+......  -+-+|-.||..         ........+.+++.|+++.-.
T Consensus        65 ----~~~v~~~~~~l~~~~~~~~~iid~sT~~---------p~~~~~~~~~~~~~gi~~lda  113 (156)
T d2cvza2          65 ----TREVYEVAEALYPYLREGTYWVDATSGE---------PEASRRLAERLREKGVTYLDA  113 (156)
T ss_dssp             ----HHHHHHHHHHHTTTCCTTEEEEECSCCC---------HHHHHHHHHHHHTTTEEEEEC
T ss_pred             ----hhhhhhhhccccccccccccccccccCC---------HHHHHHHHHHHHHcCCeEEec
Confidence                111222233222222  22455556544         223335567777777666543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.78  E-value=0.082  Score=45.64  Aligned_cols=32  Identities=22%  Similarity=0.580  Sum_probs=29.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~  117 (399)
                      +|+|+|| |.+|..++.+|+++|+ +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5999998 9999999999999995 799999863

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.72  E-value=0.35  Score=35.69  Aligned_cols=73  Identities=19%  Similarity=0.130  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCC----------hhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCC
Q 015872           83 PTSILVVGATG----------TLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVH  150 (399)
Q Consensus        83 ~~~vlVtGatG----------~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d  150 (399)
                      .++|||+|+..          |.+.+.++.|.+.|++++.+..+++...-...  -..-+-.+.-..+.+.++++  ++|
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lYfePlt~e~v~~Ii~~E~pd   84 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--MADATYIEPIHWEVVRKIIEKERPD   84 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEECSCCCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceeeeecCCHHHHHHHHHHhCcC
Confidence            47899999844          78999999999999999998887665322111  01223334445566777775  799


Q ss_pred             EEEECCC
Q 015872          151 TVIDCAT  157 (399)
Q Consensus       151 ~Vi~~a~  157 (399)
                      .|+-..|
T Consensus        85 ~il~~~G   91 (127)
T d1a9xa3          85 AVLPTMG   91 (127)
T ss_dssp             EEECSSS
T ss_pred             CeEEEee
Confidence            9987766

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.088  Score=40.57  Aligned_cols=34  Identities=21%  Similarity=0.380  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~  116 (399)
                      ||+|.|.|+||-||....+-+.+.  .++|.+++=+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            478999999999999999988876  4788888754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.61  E-value=0.096  Score=41.35  Aligned_cols=35  Identities=14%  Similarity=0.285  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .++|+|+|| |++|-.++..|.+.|.+|.++.+.+.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            468999997 99999999999999998887776543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.58  E-value=0.13  Score=40.77  Aligned_cols=117  Identities=16%  Similarity=0.167  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCCChhHHHH-HHHHHHCC--CcEEEEecCCCCCcccc-ccCCcEEEEccCCCCCcHHHHhc--CCCEEEE
Q 015872           81 VRPTSILVVGATGTLGRQI-VRRALDEG--YDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLV--GVHTVID  154 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l-v~~L~~~g--~~V~~~~r~~~~~~~~l-~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~  154 (399)
                      |++.+|.|+|. |.+|+.+ +..|.+.+  .+|.++.-......+.+ ...+...+.      +++.++++  ++|+|+-
T Consensus         1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHHSSCCSEEEE
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccccccccceeec
Confidence            45568999995 9999864 66666543  46776553323222222 122332222      34666775  5899998


Q ss_pred             CCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 015872          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (399)
Q Consensus       155 ~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~i  223 (399)
                      +...           .....++..+.++|. +++.      +.+...-....+. ..+..++.+..+.+
T Consensus        74 ~tp~-----------~~h~~~~~~al~~gk-~V~~------EKPl~~~~~e~~~-l~~~~~~~~~~~~v  123 (181)
T d1zh8a1          74 TLPV-----------ELNLPFIEKALRKGV-HVIC------EKPISTDVETGKK-VVELSEKSEKTVYI  123 (181)
T ss_dssp             CCCG-----------GGHHHHHHHHHHTTC-EEEE------ESSSSSSHHHHHH-HHHHHHHCSSCEEE
T ss_pred             cccc-----------cccccccccccccch-hhhc------CCCCcCCHHHHHH-HHHHHHHhCCeEEE
Confidence            7541           113356666677774 5432      2222222233332 23445666766543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.56  E-value=0.088  Score=44.81  Aligned_cols=31  Identities=23%  Similarity=0.315  Sum_probs=29.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899997 9999999999999999999999863

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.41  E-value=0.017  Score=48.22  Aligned_cols=27  Identities=22%  Similarity=0.305  Sum_probs=24.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVR  111 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~  111 (399)
                      |||+|+|| |.+|..++.+|+++|++|.
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            68999998 9999999999999998653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.38  E-value=0.08  Score=45.89  Aligned_cols=33  Identities=15%  Similarity=0.242  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ..|+|+|| |.-|..++..|++.|++|.++.++.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            46999997 9999999999999999999999863

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.1  Score=45.18  Aligned_cols=33  Identities=24%  Similarity=0.408  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      .+||+|+|| |.-|-..+..|.++|++|.++-.+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            467999998 999999999999999999999865

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.05  E-value=0.13  Score=37.71  Aligned_cols=34  Identities=21%  Similarity=0.247  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~  117 (399)
                      +++++|+|| |++|-.++..|.+   +|.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999998 9999999966554   457899999863

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.94  E-value=0.11  Score=42.76  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=28.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|| |.-|...+..|+++|++|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            899996 9999999999999999999999973

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.91  E-value=0.28  Score=39.82  Aligned_cols=101  Identities=17%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCc-EEEEecCCCCCccccccC--CcEEEEccC-------------------CCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDW--GATVVNADL-------------------SKPET  141 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~-V~~~~r~~~~~~~~l~~~--~v~~~~~Dl-------------------~d~~~  141 (399)
                      .+|.|+|- |..|..++.+|.+.|.+ |..+.-+.+..  .|...  ...+..+.-                   .+.+.
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~--~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~   92 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQ--QLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEE   92 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHH--HHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHH
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHH--HHhcCCcchhcccccccccccccccchHHHHHHHHHHHHH
Confidence            57999997 99999999999998743 55444432211  11111  111222211                   12346


Q ss_pred             HHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecc
Q 015872          142 IPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (399)
Q Consensus       142 l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss  192 (399)
                      +.+.++++|.||-+||-.....     -.++.-+.+.|++.++.-+-+++.
T Consensus        93 I~~~l~~~d~vfi~AGlGGGTG-----sgaapvia~~ake~g~lvv~ivtl  138 (209)
T d2vapa1          93 IKAAIQDSDMVFITCGLGGGTG-----TGSAPVVAEISKKIGALTVAVVTL  138 (209)
T ss_dssp             HHHHHTTCSEEEEEEETTSSHH-----HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHhccCCCEEEEEEeCCCCcc-----ccHHHHHHHHHHHcCCcEEEEEec
Confidence            7778899999999998333211     133456899999998754444443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.86  E-value=0.44  Score=39.64  Aligned_cols=36  Identities=17%  Similarity=0.222  Sum_probs=31.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      +...++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            45678999998 5999999999999999999887753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.84  E-value=0.16  Score=37.13  Aligned_cols=34  Identities=24%  Similarity=0.261  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~---~g~~V~~~~r~~  117 (399)
                      +++++|+|| |++|-.++..|.+   .|.+|+++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999998 9999999976554   488999999974

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.80  E-value=0.12  Score=45.38  Aligned_cols=34  Identities=26%  Similarity=0.316  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~  117 (399)
                      +|+|+|+|| |.-|-..+..|+++|  ++|+++.|+.
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            578999998 999999999999876  6999999974

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.76  E-value=0.12  Score=41.56  Aligned_cols=33  Identities=15%  Similarity=0.296  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~  117 (399)
                      |||+|+|| |++|-.++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999998 99999999999887  46788888763

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.61  E-value=0.15  Score=42.89  Aligned_cols=34  Identities=26%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEecCCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRP  118 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r~~~  118 (399)
                      ++|+|+|| |..|..++..|.+.| ++|.++.|.+.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            57999998 999999999999999 58999988643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.57  E-value=0.065  Score=42.58  Aligned_cols=33  Identities=24%  Similarity=0.316  Sum_probs=27.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      +.+|+|+|| |++|-.++..|.+.|++|.++.+.
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEEe
Confidence            456999997 999999999999999877666653

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.39  E-value=0.42  Score=37.33  Aligned_cols=31  Identities=26%  Similarity=0.429  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEec
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r  115 (399)
                      +||.|=| =|.||+.+.+.|.+++.+|.++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence            4688877 499999999999999999877764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.20  E-value=0.23  Score=40.76  Aligned_cols=72  Identities=13%  Similarity=0.080  Sum_probs=40.0

Q ss_pred             CCeEEEEcCCChhHH-HHHHHHHHC-CCcEEEEe-cCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC
Q 015872           83 PTSILVVGATGTLGR-QIVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        83 ~~~vlVtGatG~iG~-~lv~~L~~~-g~~V~~~~-r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~  157 (399)
                      +-+|.|+|+ |.+|. +++..+... +.+|.++. |+.++.....+..++....  +....++.++++  ++|+|+-+..
T Consensus        33 ~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~--~~~~~d~~ell~~~~iD~V~I~tp  109 (221)
T d1h6da1          33 RFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRK--IYDYSNFDKIAKDPKIDAVYIILP  109 (221)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGG--EECSSSGGGGGGCTTCCEEEECSC
T ss_pred             CEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccc--ccccCchhhhcccccceeeeeccc
Confidence            348999996 99996 566665554 67888655 4433322222222321100  011233555664  6899988765

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.17  E-value=0.35  Score=39.07  Aligned_cols=32  Identities=16%  Similarity=0.311  Sum_probs=26.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      |||+|+|. +-.|..+++.|++.|++|.++.-.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~   32 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTH   32 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcC
Confidence            67888875 557999999999999999877643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.13  E-value=0.33  Score=41.54  Aligned_cols=35  Identities=17%  Similarity=0.160  Sum_probs=31.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r  115 (399)
                      ....++|+|-|- |.+|+++++.|.+.|.+|++++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            456789999996 99999999999999999998875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.96  E-value=0.17  Score=39.27  Aligned_cols=68  Identities=15%  Similarity=0.123  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCCC
Q 015872           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (399)
Q Consensus        81 ~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~~  158 (399)
                      +..|+++|.| -|.+|+-+++.|...|-+|++..+++-...+. .-.+.++        ..+.++++..|++|-+.|.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-~mdGf~v--------~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFNV--------VTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCEE--------CCHHHHTTTCSEEEECCSS
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHH-HhcCCcc--------CchhHccccCcEEEEcCCC
Confidence            4468899998 59999999999999999999999874332211 1123333        3477899999999999883

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.92  E-value=0.14  Score=42.35  Aligned_cols=32  Identities=31%  Similarity=0.483  Sum_probs=29.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~  117 (399)
                      +|+|+|| |..|-..+..|.++|+ +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999998 9999999999999995 799999863

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.39  Score=41.18  Aligned_cols=33  Identities=27%  Similarity=0.300  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      -|++=--.||..|.+|++.|+.+|++|+.+.+.
T Consensus        37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            356666789999999999999999999999876

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.64  E-value=0.15  Score=47.96  Aligned_cols=100  Identities=11%  Similarity=0.164  Sum_probs=62.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCc----------c------------ccccC----CcEEEEcc
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA----------D------------FLRDW----GATVVNAD  135 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~----------~------------~l~~~----~v~~~~~D  135 (399)
                      ..+|+|+|+ |.+|..+++.|+..|. .+++++.+.-...          +            .+.+.    .++.+..+
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~  103 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES  103 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence            458999997 7899999999999994 6788776421110          0            11111    13333333


Q ss_pred             CCCC-CcHHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccC
Q 015872          136 LSKP-ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (399)
Q Consensus       136 l~d~-~~l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~  194 (399)
                      +.+. +...+.+.++|+||.+..          |......+-++|.+.++ .||..++.|
T Consensus       104 ~~~~~~~~~~~~~~~dvVv~~~~----------~~~~~~~l~~~c~~~~i-p~i~~~~~G  152 (529)
T d1yova1         104 PENLLDNDPSFFCRFTVVVATQL----------PESTSLRLADVLWNSQI-PLLICRTYG  152 (529)
T ss_dssp             HHHHHHSCGGGGGGCSEEEEESC----------CHHHHHHHHHHHHHHTC-CEEEEEEET
T ss_pred             chhhhhhHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence            2210 111244678999998752          34455678899999988 577777654

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.35  E-value=0.18  Score=39.05  Aligned_cols=31  Identities=19%  Similarity=0.479  Sum_probs=26.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      ||+|+|| |++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999998 999999999985 578999998753

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.08  E-value=0.38  Score=37.99  Aligned_cols=70  Identities=11%  Similarity=0.087  Sum_probs=41.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCcEEEEe-cCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~-g~~V~~~~-r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~  157 (399)
                      .||.|+|+ |.+|+..++.|... +.+|.++. ++.++........++.   .+..-.+++.++++  ++|+|+-+..
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~~iD~v~I~tp   75 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP---ESTKIHGSYESLLEDPEIDALYVPLP   75 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC---TTCEEESSHHHHHHCTTCCEEEECCC
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccc---cceeecCcHHHhhhccccceeeeccc
Confidence            57999995 89999999998876 67888664 4422221111111210   00001234666664  6899997754

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.90  E-value=0.34  Score=38.84  Aligned_cols=100  Identities=20%  Similarity=0.236  Sum_probs=59.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCcccccc--CCcEEEEcc-C------------------CCCCc
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRD--WGATVVNAD-L------------------SKPET  141 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~--~~v~~~~~D-l------------------~d~~~  141 (399)
                      +||.|+|- |..|..++.+|.+.|. .|-.+.-+.+..  .|..  ...+...+. +                  .+.+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~--~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~   77 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQ--VLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEK   77 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHH--HHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHH--HHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHH
Confidence            36899997 8999999999999873 243333332211  1111  112222221 1                  12356


Q ss_pred             HHHHhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          142 IPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       142 l~~~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      +.+.++++|.||-+||-....     --.++-.+.+.|++.++.-+-+++
T Consensus        78 I~~~l~~~d~vfi~AGlGGgT-----GtgaapviA~~ake~g~lvv~ivt  122 (194)
T d1w5fa1          78 IREVLQDTHMVFITAGFGGGT-----GTGASPVIAKIAKEMGILTVAIVT  122 (194)
T ss_dssp             HHHHTTTCSEEEEEEETTSSH-----HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHhcCCCeEEEEEecCCCc-----ccchHHHHHHHHHHcCCceEEEEe
Confidence            778888999999999833221     113455689999999874444444

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.59  E-value=0.47  Score=37.02  Aligned_cols=67  Identities=18%  Similarity=0.265  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhcCCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi~~a~  157 (399)
                      +.|+|.|+|= |-.|.+=+..|.+.|.+|++-.|...+.++.-+..|+++        -++.++.+.+|+|..+..
T Consensus        15 k~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v--------~~~~eA~~~aDiim~L~P   81 (182)
T d1np3a2          15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV--------ADVKTAVAAADVVMILTP   81 (182)
T ss_dssp             HTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE--------ECHHHHHHTCSEEEECSC
T ss_pred             CCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc--------ccHHHHhhhcCeeeeecc
Confidence            3588999995 999999999999999999999997655555444556655        347789999999999986

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.34  E-value=0.26  Score=37.06  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH----HCCCcEEEEecCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRAL----DEGYDVRCLVRPRP  118 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~----~~g~~V~~~~r~~~  118 (399)
                      .++|+|+|| |++|-.++..|.    +.|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            368999998 999999999886    35899999998643

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=87.94  E-value=2.9  Score=30.00  Aligned_cols=88  Identities=18%  Similarity=0.231  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      ..||+|-|-||..|+.-+++.++-|-+|.+-+.....-...   .++.+       .+++.++.+  ++|+=+-+..   
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~---~giPV-------f~sV~eAv~~~~~~~SvIfVP---   72 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH---LGLPV-------FNTVREAVAATGATASVIYVP---   72 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEE---TTEEE-------ESSHHHHHHHHCCCEEEECCC---
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCccc---CCCch-------hhHHHHHHHHhCCCeEEEecc---
Confidence            45899999999999999999999999999888752221111   12211       245666665  6665554443   


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      +.       .....++||+ .+|++.+|.++
T Consensus        73 p~-------~a~dA~~EAi-~agI~~iV~IT   95 (119)
T d2nu7a1          73 AP-------FCKDSILEAI-DAGIKLIITIT   95 (119)
T ss_dssp             GG-------GHHHHHHHHH-HTTCSEEEECC
T ss_pred             HH-------HHHHHHHHHH-HCCCCEEEEec
Confidence            11       1233455555 67998887776

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.17  E-value=0.69  Score=35.96  Aligned_cols=111  Identities=12%  Similarity=0.064  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g--~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~  157 (399)
                      .+.+|.|+|. |.+|...++.|.+.+  ..+.+.+....+.....  .+..        ..++.+++.  ++|+|+-+..
T Consensus         6 ~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~e~l~~~~iD~V~I~tp   74 (172)
T d1lc0a1           6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSL--DEVR--------QISLEDALRSQEIDVAYICSE   74 (172)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEE--TTEE--------BCCHHHHHHCSSEEEEEECSC
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHh--hccC--------cCCHHHHHhCCCcchhhhccc
Confidence            4568999996 999999888877542  22333333222211111  1111        113666665  6799988764


Q ss_pred             CCCCCcchhccHHHHHHHHHHHHHcCCcEEEEecccCCCCCCCCcHHHHHHHHHHHHHhCCCCEE
Q 015872          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (399)
Q Consensus       158 ~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~g~~~~  222 (399)
                      .           .....++..|.++|. +++ +     +.+...-....+... +..++.+..+.
T Consensus        75 ~-----------~~H~~~~~~al~~gk-~V~-~-----EKP~a~~~~e~~~l~-~~a~~~~~~~~  120 (172)
T d1lc0a1          75 S-----------SSHEDYIRQFLQAGK-HVL-V-----EYPMTLSFAAAQELW-ELAAQKGRVLH  120 (172)
T ss_dssp             G-----------GGHHHHHHHHHHTTC-EEE-E-----ESCSCSCHHHHHHHH-HHHHHTTCCEE
T ss_pred             c-----------cccccccccccccch-hhh-c-----CCCccccHHHHHHHH-HHHHHcCCeEE
Confidence            1           112345666666664 433 2     332223334443333 23455666543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.06  E-value=0.33  Score=41.82  Aligned_cols=33  Identities=30%  Similarity=0.386  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      -.|+|+|| |..|-..+.+|.+.|.+|+++.+..
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            46999998 9999999999999999999999863

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.03  E-value=3.3  Score=30.19  Aligned_cols=88  Identities=18%  Similarity=0.198  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      ..+|+|-|-||..|+.-+++.++-|-+|.+-+.........   .++.+       .+++.++.+  ++|+=+-+..+  
T Consensus        15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~---~giPV-------f~tV~eA~~~~~~daSvIfVPp--   82 (130)
T d1euca1          15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH---LGLPV-------FNTVKEAKEQTGATASVIYVPP--   82 (130)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TTEEE-------ESSHHHHHHHHCCCEEEECCCH--
T ss_pred             CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCccc---cCccc-------hhhHHHHHHhcCCcEEEEecCH--
Confidence            46899999999999999999999999999888752221111   12211       245666665  67766665431  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                        .      .....++||+ .+|++.+|.++
T Consensus        83 --~------~a~dAi~EAi-~agI~liV~IT  104 (130)
T d1euca1          83 --P------FAAAAINEAI-DAEVPLVVCIT  104 (130)
T ss_dssp             --H------HHHHHHHHHH-HTTCSEEEECC
T ss_pred             --H------HHHHHHHHHH-hCCCCEEEEec
Confidence              0      2233445544 46998877776

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.31  Score=42.19  Aligned_cols=31  Identities=29%  Similarity=0.426  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|| |..|-..+..|.++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789997 9999999999999999999999753

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=86.36  E-value=1.5  Score=34.07  Aligned_cols=23  Identities=30%  Similarity=0.660  Sum_probs=19.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG  107 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g  107 (399)
                      +||.|=| =|.||+.+.+.+++++
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~   24 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGG   24 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCC
Confidence            5788877 6999999999999753

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.30  E-value=4  Score=29.34  Aligned_cols=88  Identities=25%  Similarity=0.343  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccCCCCCcHHHHhc--CCCEEEECCCCCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vi~~a~~~~  160 (399)
                      ..||+|-|-||..|+.-+++.++-|-+|.+-+.....-.. +  .++.+       .+++.++.+  ++|+=+-+..+  
T Consensus         7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~-~--~giPV-------f~tV~eAv~~~~~d~SvIfVPp--   74 (121)
T d1oi7a1           7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGME-V--LGVPV-------YDTVKEAVAHHEVDASIIFVPA--   74 (121)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE-E--TTEEE-------ESSHHHHHHHSCCSEEEECCCH--
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcE-E--ECCch-------HhhHHHHHHhcCCeEEEEeeCH--
Confidence            3589999999999999999999999999988875322111 1  12211       245666664  67766665541  


Q ss_pred             CCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       161 ~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                        .      .....++||. ++|++.+|.++
T Consensus        75 --~------~a~dAi~EAi-~agI~liv~IT   96 (121)
T d1oi7a1          75 --P------AAADAALEAA-HAGIPLIVLIT   96 (121)
T ss_dssp             --H------HHHHHHHHHH-HTTCSEEEECC
T ss_pred             --H------HHHHHHHHHH-hCCCcEEEEec
Confidence              0      2233344444 56998877776

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.87  E-value=0.48  Score=40.94  Aligned_cols=53  Identities=21%  Similarity=0.410  Sum_probs=32.2

Q ss_pred             CeEEEEcC-C-Chh--HHHHHHHHHHCCCcEEEEecCCCCCccccccCCcEEEEccC
Q 015872           84 TSILVVGA-T-GTL--GRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL  136 (399)
Q Consensus        84 ~~vlVtGa-t-G~i--G~~lv~~L~~~g~~V~~~~r~~~~~~~~l~~~~v~~~~~Dl  136 (399)
                      |||+|++| | |.+  +.+|+++|.++||+|..++....-....+...+..+...+.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~   57 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRI   57 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEEC
Confidence            57888764 3 332  33488999999999998875432222334444555544443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.60  E-value=0.41  Score=39.50  Aligned_cols=33  Identities=27%  Similarity=0.401  Sum_probs=29.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      -|+|+|| |-.|...+..|.++|++|.++.++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3899998 99999999999999999999998743

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=85.58  E-value=2.5  Score=32.49  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=24.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CcEEEEec
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVR  115 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g-~~V~~~~r  115 (399)
                      +||.|-| =|.||+.+.+.++++. .+|.++.-
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd   33 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND   33 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence            5788877 5999999999999884 56665553

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.03  E-value=0.42  Score=39.00  Aligned_cols=33  Identities=24%  Similarity=0.278  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCcEEEEecCC
Q 015872           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPR  117 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~--g~~V~~~~r~~  117 (399)
                      +||+|+|| |--|...+..|.+.  |++|+++.+.+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999997 99999999999875  79999998863

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.75  E-value=0.49  Score=41.62  Aligned_cols=31  Identities=19%  Similarity=0.162  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|+ |+-|..++.+|.++|++|.++-+..
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG~   35 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMGQ   35 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecCC
Confidence            889996 9999999999999999999999863

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.66  E-value=0.43  Score=38.07  Aligned_cols=24  Identities=25%  Similarity=0.612  Sum_probs=21.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEG  107 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g  107 (399)
                      ++||.|=| =|.||+.+.+.+++++
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcC
Confidence            47899988 6999999999999875

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.10  E-value=1.2  Score=34.48  Aligned_cols=70  Identities=14%  Similarity=0.062  Sum_probs=42.6

Q ss_pred             CCeEEEEcCCChhHHH-HHHHHHHC-----CCcEEEEecCCCCCc---ccccc------CCcEEEEccCCCCCcHHHHhc
Q 015872           83 PTSILVVGATGTLGRQ-IVRRALDE-----GYDVRCLVRPRPAPA---DFLRD------WGATVVNADLSKPETIPATLV  147 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~-lv~~L~~~-----g~~V~~~~r~~~~~~---~~l~~------~~v~~~~~Dl~d~~~l~~~~~  147 (399)
                      ..||.|+|| |.+|.. ++..|+..     +.+|.+++.++++..   ..+..      ....+..     ..+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccC
Confidence            357999998 445543 45555543     248999998754321   11111      1222222     224778999


Q ss_pred             CCCEEEECCCC
Q 015872          148 GVHTVIDCATG  158 (399)
Q Consensus       148 ~~d~Vi~~a~~  158 (399)
                      ++|+||.+++.
T Consensus        77 ~AD~Vvitag~   87 (167)
T d1u8xx1          77 DVDFVMAHIRV   87 (167)
T ss_dssp             SCSEEEECCCT
T ss_pred             CCCEEEECCCc
Confidence            99999999984

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.03  E-value=0.71  Score=36.97  Aligned_cols=101  Identities=22%  Similarity=0.218  Sum_probs=59.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEc-----------c--------CCCCCcHHH
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNA-----------D--------LSKPETIPA  144 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~-----------D--------l~d~~~l~~  144 (399)
                      +|-|+|- |..|..++.+|.+.|. .|..+.-+.+...-.......++..+           |        ..+.+.+.+
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~   81 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEE   81 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHH
Confidence            3678886 7789999999999874 34444443222110000011222222           1        123466888


Q ss_pred             HhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       145 ~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      +++++|.||-+||-.....     -.++--+++.|++.++--+-+++
T Consensus        82 ~l~~~d~vfi~AGlGGgTG-----tGaaPviA~iake~g~l~v~ivt  123 (198)
T d1rq2a1          82 LLRGADMVFVTAGEGGGTG-----TGGAPVVASIARKLGALTVGVVT  123 (198)
T ss_dssp             HHTTCSEEEEEEETTSSHH-----HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HhcCCCEEEEEEecCCCCC-----cchHHHHHHHHHHcCCcEEEEEe
Confidence            8899999999998333211     13445589999999974444444

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.47  E-value=1.6  Score=33.09  Aligned_cols=35  Identities=26%  Similarity=0.285  Sum_probs=29.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCC
Q 015872           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (399)
Q Consensus        82 ~~~~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~  117 (399)
                      -.++|+|+|| |..|--.+..|++.|. .|+++.|..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3578999998 9999999999999985 477887753

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=82.38  E-value=3.8  Score=31.68  Aligned_cols=29  Identities=24%  Similarity=0.407  Sum_probs=22.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC---CcEEEE
Q 015872           84 TSILVVGATGTLGRQIVRRALDEG---YDVRCL  113 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~L~~~g---~~V~~~  113 (399)
                      +||.|-| =|.||+.+.+.++++.   .+|.++
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaI   32 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVI   32 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEE
Confidence            4788877 6999999999988763   345544

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=82.37  E-value=2.3  Score=33.86  Aligned_cols=33  Identities=15%  Similarity=0.250  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEEecC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~  116 (399)
                      +|||+++|. +..+..+.+.|++.|++|.++.-.
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~   35 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQ   35 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeC
Confidence            578999985 788999999999999998877644

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.51  E-value=1.2  Score=34.35  Aligned_cols=69  Identities=17%  Similarity=0.044  Sum_probs=41.7

Q ss_pred             CeEEEEcCCChhHHHHHHH-HHHC-----CCcEEEEecCCCCCcccc------ccCCcEEEEccCCCCCcHHHHhcCCCE
Q 015872           84 TSILVVGATGTLGRQIVRR-ALDE-----GYDVRCLVRPRPAPADFL------RDWGATVVNADLSKPETIPATLVGVHT  151 (399)
Q Consensus        84 ~~vlVtGatG~iG~~lv~~-L~~~-----g~~V~~~~r~~~~~~~~l------~~~~v~~~~~Dl~d~~~l~~~~~~~d~  151 (399)
                      |||.|+|| |-+|...+-. |+..     +.++.+++.++++.....      .........     ..+..++++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-----t~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-----SDTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-----CSSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-----ecCcccccCCCCE
Confidence            58999998 5566555533 3321     368999998754322100      111222222     1346678999999


Q ss_pred             EEECCCC
Q 015872          152 VIDCATG  158 (399)
Q Consensus       152 Vi~~a~~  158 (399)
                      ||..++.
T Consensus        75 VVita~~   81 (162)
T d1up7a1          75 VIFQFRP   81 (162)
T ss_dssp             EEECCCT
T ss_pred             EEEeccc
Confidence            9999984

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.04  E-value=0.75  Score=39.24  Aligned_cols=31  Identities=29%  Similarity=0.395  Sum_probs=29.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCcEEEEecCC
Q 015872           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~  117 (399)
                      |+|+|| |..|-..+..|.++|.+|.++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            999997 9999999999999999999999864

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.92  E-value=1.5  Score=35.03  Aligned_cols=101  Identities=19%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-cEEEEecCCCCCccccccCCcEEEEc-----------cC--------CCCCcHHH
Q 015872           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNA-----------DL--------SKPETIPA  144 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~-~V~~~~r~~~~~~~~l~~~~v~~~~~-----------Dl--------~d~~~l~~  144 (399)
                      .|.|+|- |..|..++.+|.+.|. .|..+.-+.+...-.......++..+           |.        .+.+.+.+
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            4788886 8899999999999873 24433333222110000001111111           11        13456788


Q ss_pred             HhcCCCEEEECCCCCCCCcchhccHHHHHHHHHHHHHcCCcEEEEec
Q 015872          145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (399)
Q Consensus       145 ~~~~~d~Vi~~a~~~~~~~~~~~n~~~~~~l~~aa~~~~v~~~V~~S  191 (399)
                      .++++|.||-+||-.....     -.++--+++.|++.++--+-++.
T Consensus        82 ~l~~~d~vfi~AGlGGGTG-----tgaapviA~~ake~g~lvvaivt  123 (198)
T d1ofua1          82 VLEGADMVFITTGMGGGTG-----TGAAPIIAEVAKEMGILTVAVVT  123 (198)
T ss_dssp             HHTTCSEEEEEEETTSSHH-----HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HhCCCCeEEEEecCCCCcc-----ccHHHHHHHHHHHcCCCEEEEEe
Confidence            8899999999998333211     13345589999999874333443

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.87  E-value=0.77  Score=39.72  Aligned_cols=32  Identities=28%  Similarity=0.412  Sum_probs=28.3

Q ss_pred             EEEEcCCChhHHHHHHHHH-----HCCCcEEEEecCCC
Q 015872           86 ILVVGATGTLGRQIVRRAL-----DEGYDVRCLVRPRP  118 (399)
Q Consensus        86 vlVtGatG~iG~~lv~~L~-----~~g~~V~~~~r~~~  118 (399)
                      |+|+|| |-.|..++..|+     ++|++|+++.|.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            999998 999999999997     46999999998643

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.70  E-value=0.54  Score=38.30  Aligned_cols=34  Identities=24%  Similarity=0.185  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------cEEEEecCC
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPR  117 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~-------~V~~~~r~~  117 (399)
                      +.+|+|+|| |--|-+.+.+|+++||       +|+++.+.+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            458999997 9999999999999984       799998863

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.58  E-value=0.86  Score=37.72  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=30.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCcEEEEecCCC
Q 015872           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r~~~  118 (399)
                      .|+|+|| |-.|...+..|.++|++|.++.+++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4999998 99999999999999999999999744

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=80.51  E-value=0.79  Score=38.28  Aligned_cols=35  Identities=11%  Similarity=0.208  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCcEEEEec
Q 015872           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (399)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~~r  115 (399)
                      +.+.++|+|-| .|.+|+++++.|.+.|.+|+++.-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            45678999999 599999999999999999988764

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.17  E-value=3.6  Score=31.25  Aligned_cols=31  Identities=13%  Similarity=0.197  Sum_probs=26.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCcEEEE
Q 015872           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL  113 (399)
Q Consensus        83 ~~~vlVtGatG~iG~~lv~~L~~~g~~V~~~  113 (399)
                      .++|.|++.+|..|..++..+.+.|.++--+
T Consensus         3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l   33 (163)
T d2csua3           3 GNKVAIMTNAGGPGVLTADELDKRGLKLATL   33 (163)
T ss_dssp             SSEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence            4689999999999999999999999776433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.10  E-value=2.6  Score=32.52  Aligned_cols=29  Identities=21%  Similarity=0.427  Sum_probs=22.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC---CCcEEEEe
Q 015872           85 SILVVGATGTLGRQIVRRALDE---GYDVRCLV  114 (399)
Q Consensus        85 ~vlVtGatG~iG~~lv~~L~~~---g~~V~~~~  114 (399)
                      ||.|=| =|.||+.+.+.++++   +.+|.++.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN   33 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN   33 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec
Confidence            577877 699999999999975   35666553