Citrus Sinensis ID: 015874
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 399 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XGY7 | 493 | Alcohol-forming fatty acy | N/A | no | 0.982 | 0.795 | 0.553 | 1e-128 | |
| Q93ZB9 | 493 | Fatty acyl-CoA reductase | yes | no | 0.979 | 0.793 | 0.542 | 1e-126 | |
| Q9LXN3 | 493 | Probable fatty acyl-CoA r | no | no | 0.974 | 0.789 | 0.515 | 1e-120 | |
| Q0WRB0 | 496 | Probable fatty acyl-CoA r | no | no | 0.982 | 0.790 | 0.518 | 1e-118 | |
| Q39152 | 491 | Fatty acyl-CoA reductase | no | no | 0.969 | 0.788 | 0.512 | 1e-117 | |
| Q1PEI6 | 496 | Fatty acyl-CoA reductase | no | no | 0.974 | 0.784 | 0.506 | 1e-109 | |
| Q08891 | 616 | Fatty acyl-CoA reductase | no | no | 0.934 | 0.605 | 0.402 | 7e-77 | |
| Q9FMQ9 | 409 | Putative fatty acyl-CoA r | no | no | 0.701 | 0.684 | 0.432 | 8e-70 | |
| B9TSP7 | 548 | Fatty acyl-CoA reductase | no | no | 0.864 | 0.629 | 0.373 | 5e-67 | |
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | yes | no | 0.796 | 0.508 | 0.302 | 2e-41 |
| >sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/399 (55%), Positives = 292/399 (73%), Gaps = 7/399 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E+GS++EFL+NK ILV+G TG +AK+F+EK+LR QPNVKKLYL +RA D ++AALR QNE
Sbjct: 3 EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V K++F VLK+ G SF+SEK+T VPGDI+ EDL LKD NLKEE+W E+D++VN A
Sbjct: 63 VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A F ERYDV+ INT G ++++FAKKC KLK+FVHVSTAYV+GE+ GLILE P
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G GLD + E K+++ K+NEL+ GA +K I MK++G ERA+ GWPN YVFTK
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
+GEML+ Q K ++ L IIRPT+++ T+KEPFPGWVE ++TI+ + V +G LRC++
Sbjct: 243 ALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCG 302
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPS-DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
I+D+IP DMVVNA IVAMVAHA Q + YHVGSS NP+ L ++ + YFTK
Sbjct: 303 PSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTK 362
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
PWIN PV V + ++FSS ++FH Y+ + +LLPLKV
Sbjct: 363 NPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKV 401
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NADPH-dependent alcohol-forming fatty acyl-coenzyme A reductase that catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The recombinant enzyme accepts saturated and mono-unsaturated fatty acyl-CoAs of 16 to 22 carbons. Simmondsia chinensis (taxid: 3999) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 8EC: 4 |
| >sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/398 (54%), Positives = 294/398 (73%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DV+P DMVVN+++V+M A A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
KPW NK+GK VKV I + SS+ SFH YM IRYL+ LK
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C24:0 and C26:0. May be unable to use saturated and monounsaturated C16 and C18 acyl-CoA as substrates. Involved in cuticular wax formation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/396 (51%), Positives = 285/396 (71%), Gaps = 7/396 (1%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ ++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL
Sbjct: 4 NCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLE 63
Query: 65 KDVFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA
Sbjct: 64 KDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILE------NP 177
T FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E
Sbjct: 124 TNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L+G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+M
Sbjct: 184 LNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSM 243
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 244 GEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPN 303
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
++D+IPVDMV NAM+ A HA + +YHVGSS +NP+T I D YFTK P
Sbjct: 304 SVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPL 363
Query: 358 INKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
+ + G + VSK + S++A F YM +RY LPL++
Sbjct: 364 VRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 284/401 (70%), Gaps = 9/401 (2%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + + D+IPVDMV NAMI A HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
TK P ++ G + VSK+ ++A F YM +RY LPL++
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 279/396 (70%), Gaps = 9/396 (2%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
+ V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++EV+
Sbjct: 4 NCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVME 63
Query: 65 KDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N AA
Sbjct: 64 IDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------ 177
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVFTK M
Sbjct: 184 LSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVFTKAM 241
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
GEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C + ++
Sbjct: 242 GEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSN 301
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
+ D+IP DMVVNAM+ A AH+ IYHVGSS +NPVT + D+ YF K+P
Sbjct: 302 SVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPL 361
Query: 358 INKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
I + G P+ V K + S++A F YM +RY LPL++
Sbjct: 362 IGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/397 (50%), Positives = 274/397 (69%), Gaps = 8/397 (2%)
Query: 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA 64
S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R + E
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 65 KDVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123
KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN AA
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----- 178
T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183
Query: 179 --DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYVFTK+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243
Query: 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296
MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C + +
Sbjct: 244 MGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDV 303
Query: 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ D+IP DMV NAMI A HA +Y VGSS +NP+ I + F YFTK
Sbjct: 304 NSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNS 363
Query: 357 WINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
++ G + VSK+ L ++A F YM IRY LP+++
Sbjct: 364 LRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQL 400
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 245/395 (62%), Gaps = 22/395 (5%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEVL
Sbjct: 124 IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDA 183
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA T
Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTT 242
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-------- 177
F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 243 FNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIA 302
Query: 178 ----LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +TYV
Sbjct: 303 TENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYV 358
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 359 FTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGF 418
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA----NIYHVGSSLRNPVTLVSILDYG 348
+ + K ++DV+P DMVVNA + A+ H SD N+Y + SS NP+ + +
Sbjct: 419 LVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELL 478
Query: 349 FVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYM 383
+ ++ P ++ +G P+ V + LF+S+ F ++
Sbjct: 479 YNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHL 513
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (675), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 184/287 (64%), Gaps = 7/287 (2%)
Query: 113 ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 ILE------NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226
I+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+G
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 227 WPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ 286
WPNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
G L+C + + K + D+IPVDMVVNAMI H +YHVGSS +NPV I +
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYE 279
Query: 347 YGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
YF K P + + G + V K+ S++A F Y +RY LP+++
Sbjct: 280 MMSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQI 325
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+V FLE K+ LV+G TGF+AKV IEK+LR + K++L +R+ D +SA R +E+++
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
D+F +LK+ G+ +F+ K+ V GDI ++LG+K S + + E+D++++ T
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTT 195
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----DGA 181
FD+RYD A +N LG L++F K C KLK+F+H STAYV G+R G +LE PL +
Sbjct: 196 FDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENIT 255
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
S L+ +E+K+ + + + + + +K +K LG ERA+ +GW N+Y FTK +GE +
Sbjct: 256 SDLNIKSELKLASEAVRKFRGREEIKK-----LKELGFERAQHYGWENSYTFTKAIGEAV 310
Query: 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301
+ + NL +VIIRP+++ +Y EPFPGW++ + + + +A A+G + + + +MD
Sbjct: 311 IHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMD 370
Query: 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTKKP 356
+IPVDMV NA I AM H + +Y++ SS NP+ ++D + P
Sbjct: 371 IIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFP 426
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. May be involved in the generation of C30 primary alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 179/360 (49%), Gaps = 42/360 (11%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ +F +++ ++G TGF+ KV +EK+LR P ++ +YL +R + R E+L
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL-TELLNA 177
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGL--KDSNLKEELWNELDIMVNSAAI 123
+F L+++ L+ K+ + GDI+SE+LG+ KD NL L + ++ +SAA
Sbjct: 178 PLFESLRQEKPKELS-----KVIPISGDITSEELGISEKDQNL---LCRNVSVVFHSAAT 229
Query: 124 TKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL------ILENP 177
KFDE+ ++ IN LG LV + + L +HVSTAY +RT + NP
Sbjct: 230 VKFDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNP 289
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237
D S +++ E ++DQ L K PNTY FTK +
Sbjct: 290 DDIISLINWLPE-DILDQLTPRLIGKR-----------------------PNTYTFTKAL 325
Query: 238 GEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297
E ++ + NL + I+RP++V+ + EPF GWV++ L A A+G R ++ E
Sbjct: 326 AEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKN 385
Query: 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDA-NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ D++PVD+V+N MI A A + S+ IY+ + RNP+ + + K P
Sbjct: 386 YVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRKHP 445
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 399 | ||||||
| 225436689 | 490 | PREDICTED: fatty acyl-CoA reductase 3 [V | 0.982 | 0.8 | 0.619 | 1e-146 | |
| 356550111 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.979 | 0.797 | 0.620 | 1e-144 | |
| 356543580 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.979 | 0.797 | 0.608 | 1e-143 | |
| 356543578 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.979 | 0.797 | 0.608 | 1e-142 | |
| 356550115 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.979 | 0.797 | 0.608 | 1e-142 | |
| 356542728 | 493 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.982 | 0.795 | 0.61 | 1e-141 | |
| 388500498 | 492 | unknown [Medicago truncatula] | 0.979 | 0.794 | 0.591 | 1e-140 | |
| 359500474 | 489 | fatty acyl-CoA reductase 3 [Populus tome | 0.979 | 0.799 | 0.600 | 1e-140 | |
| 225436687 | 490 | PREDICTED: fatty acyl-CoA reductase 3 is | 0.957 | 0.779 | 0.601 | 1e-139 | |
| 356541412 | 523 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.982 | 0.749 | 0.602 | 1e-139 |
| >gi|225436689|ref|XP_002263184.1| PREDICTED: fatty acyl-CoA reductase 3 [Vitis vinifera] gi|296084945|emb|CBI28354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/399 (61%), Positives = 316/399 (79%), Gaps = 7/399 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+EKILR+QPNVKKL+L +RAAD SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EVL K++F VLK+KWG+ LNSFISEK+T +PGDIS E+LG+ + NL+EE+W E+D+++N
Sbjct: 61 EVLGKELFRVLKDKWGSNLNSFISEKVTPIPGDISCENLGVTNLNLREEIWREVDVILNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG H++NF+KKCVKLK+ +HVSTAYV+GER GLILE+P
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+GASGLD D E K++++ LNEL A ++ I+L MK LG +RA ++GWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ Q KENL LVI+RPT+++ TY EPF GW+E ++TI+ + +G L CL+
Sbjct: 241 KAMGEMLLGQFKENLPLVILRPTIITSTYMEPFSGWIEGIRTIDNVLAGYCKGKLTCLLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+D IP DMVVN MIVAMVAHA QP + IY VGSSL+NP+ L+ + D+ F YF +
Sbjct: 301 DPECILDAIPGDMVVNCMIVAMVAHANQPCEI-IYQVGSSLKNPLKLLDLHDFFFKYFHE 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
PWINK GK VKVSK+ILFS+ FHGY+ +RY+LPLKV
Sbjct: 360 NPWINKDGKAVKVSKLILFSTTFVFHGYLAVRYMLPLKV 398
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550111|ref|XP_003543433.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/398 (62%), Positives = 310/398 (77%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FLE+KTIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLEDKTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGLKDS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A G+N GV H++NFAK+C KLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALGLNIFGVKHVMNFAKQCTKLKVVLHVSTAYVCGERGGLILEEPYNF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD DAE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIDAERTIVCDKLDELREQGATEREIKIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K LS+VI+RPT+V+ T +EPFPGWVE ++TI++L V +G L C +G
Sbjct: 241 KAVGEMLVEQLKGRLSVVIMRPTIVTSTLREPFPGWVEGVRTIDSLAVTYGKGKLTCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++D +P DMVVNAM+VAMVAHA QPSD IYHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDAVPADMVVNAMLVAMVAHANQPSDI-IYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
KPWINK G PVKV ++ + + + SF YM IRYLLPLK
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLK 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543580|ref|XP_003540238.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/398 (60%), Positives = 313/398 (78%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+GSV+ FL+++TIL+ G TGF+AK+F+EKILRVQPNVKKL+L +RA+D SA R QN
Sbjct: 1 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++AKD+F VLKEK G SFISEK+T VPGDIS EDLGL DS L+EE+ N+ D++VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYD+A G+N GV H++ FAK+C KLK+ +HVSTAYV GER GLILE+P
Sbjct: 121 AATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G SGLD +AE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K +GEML++Q K +LS+VI+RPT+V+ T +EPFPGW E ++TI++L V +G L+C +G
Sbjct: 241 KAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++DV+P DMVVNAM+VAMVAHAKQPSD +YHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDVVPADMVVNAMLVAMVAHAKQPSDI-VYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
KPWINK G PVKV ++ + + + SF YM IRYLLPLK
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLK 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543578|ref|XP_003540237.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/398 (60%), Positives = 309/398 (77%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++KTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA D +SA R
Sbjct: 1 MELGSIMHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHT 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F +LKEK GTR NSF+SEK+ VPGDIS EDL L+D L EE++N+ D++VN
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSFVSEKLAVVPGDISQEDLNLEDPILGEEIFNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A INTLGV+H+++FAKKCVKLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALSINTLGVLHVLSFAKKCVKLKVLIHVSTAYVCGEREGLILEAPHHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G G D D E K ++ KLN+L+ +GA + +I L MK+LGT+RA ++GWPNTYVFT
Sbjct: 181 GVSLNGVPGPDIDMEKKKVEDKLNQLREEGAIEHDIELAMKDLGTQRATMYGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ +K N+++VI+RPT+V+ TYKEPFPGW+E L+TI+++ VA +G L C +
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTYKEPFPGWIEGLRTIDSIVVAYGKGKLVCFLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DVIP DMVVNAM+VAMVAHA QPSD IYHVGSS+ NPV +++ DY YFT+
Sbjct: 301 NLEAVFDVIPADMVVNAMLVAMVAHANQPSDI-IYHVGSSVVNPVMYLNLRDYSVRYFTE 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
KPWIN+ GKPVKV K + ++ SF YM IRYLLPLK
Sbjct: 360 KPWINRDGKPVKVGKFTILRNMDSFRKYMYIRYLLPLK 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550115|ref|XP_003543435.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/398 (60%), Positives = 311/398 (78%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++KTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA D +SA R
Sbjct: 1 MELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHA 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F +LKEK GTR NS++SEK+T VPGDIS EDL LKD L EE++N+ D++VN
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSYVSEKLTVVPGDISQEDLNLKDPILGEEIFNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GINTLGV+H+++FAKKCVKLKV +HVSTAYV GE+ GLILE+P
Sbjct: 121 AATTNFDERYDVALGINTLGVMHVLSFAKKCVKLKVLIHVSTAYVCGEKEGLILEDPHHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G GLD D E K ++QKL +L+ +GA + +I L MK+LG+ERAK++GW NTYVFT
Sbjct: 181 GVSLNGVPGLDIDMEKKNVEQKLIQLREEGATEHDIELAMKDLGSERAKMYGWANTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ +K N+++VI+RPT+V+ T+ EPFPGW+E L+TI+++ VA +G L C +
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTHTEPFPGWIEGLRTIDSIVVAYGKGKLACFLA 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
K + DVIP DMVVN M+VAMVAHA QPSD IYH+GSS+ NPV +++ DY YF +
Sbjct: 301 NLKAVFDVIPADMVVNTMLVAMVAHANQPSDI-IYHLGSSVVNPVKYLNLRDYSVRYFME 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
PWINK GKPVKV K+ + S++ SF YM IRYLLPLK
Sbjct: 360 NPWINKDGKPVKVGKVTILSNMDSFRKYMYIRYLLPLK 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542728|ref|XP_003539817.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/400 (61%), Positives = 309/400 (77%), Gaps = 8/400 (2%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K IL++G TGF+AKV +EKILRVQPNVKKLYL +RAAD SA R N
Sbjct: 1 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 61 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KL+V VHVSTAYV GE R GLILE P
Sbjct: 121 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPY 180
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 181 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 240
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+V IRPT+V+ T+KEPFPGW E ++TI++L VA +G L C
Sbjct: 241 FTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 300
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA PSD IYHVGSS+R P+ ++ +YGF YF
Sbjct: 301 LGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYF 360
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
T KP INK G+PVKV K+ + S++ SF YM IRYLL LK
Sbjct: 361 TAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLK 400
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500498|gb|AFK38315.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/397 (59%), Positives = 301/397 (75%), Gaps = 6/397 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
+ GS+ FLE+K +LV G GF+AK+F+EKILRVQPNVKKLYL +RA D +SA R NE
Sbjct: 3 QFGSIAHFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESATRRMHNE 62
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
+L KD+F +LKE G + NSFISEK+T VPGDIS E+ LKDSNL +EL+N+ D++VN A
Sbjct: 63 ILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLA 122
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA G+NT G H++NFAK C+ L+V VHVSTAYV GER GLI+E+P
Sbjct: 123 ATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G GLD D E +V+++KLN L+ +GA +K+ + MK+LG ERAKL+GWPNTYVFTK
Sbjct: 183 VSLNGVQGLDIDEEKRVVEEKLNMLQQEGATEKDTRIAMKDLGMERAKLYGWPNTYVFTK 242
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
MGEML+ KE LS+VI+RPT+++ TYKEPFPGWVE ++TI++L VA +G L C + +
Sbjct: 243 AMGEMLVGTMKEKLSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLAD 302
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
+ + DVIP DMVVNAM+VAMV+HA QP D +IYHVGSS+ NPV S+ DY F YFT K
Sbjct: 303 LEAVFDVIPADMVVNAMLVAMVSHANQPCDDSIYHVGSSVGNPVRYESLRDYCFRYFTAK 362
Query: 356 PWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
P +K+GK +KV K+ + ++ SF YM IRYLLPLK
Sbjct: 363 PCFDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLK 399
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359500474|gb|AEV53412.1| fatty acyl-CoA reductase 3 [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/398 (60%), Positives = 310/398 (77%), Gaps = 7/398 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+++FL+NKTILV+G TG++AK+F+EKILRVQPNVKK YL +RAAD SA R ++
Sbjct: 1 MELGSILQFLDNKTILVTGATGYLAKIFVEKILRVQPNVKKFYLLLRAADAKSATERLRD 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EV+AKD+F VL+EK G L+SFISEK+T VPGDIS EDLG+KDS+LK+E+W E+D+M+N
Sbjct: 61 EVIAKDLFRVLREKHGAGLHSFISEKVTPVPGDISHEDLGVKDSSLKDEMWREIDVMLNF 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLD- 179
AA T FDERYDVA GINTLG +H++NFAKKCVK+K+ VHVSTAYV GE GLILE P
Sbjct: 121 AATTNFDERYDVALGINTLGALHVLNFAKKCVKIKMLVHVSTAYVCGEDAGLILEQPYHM 180
Query: 180 -----GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
G +D + E +++ +KLNELK + P+K+IT MK+ G ERA+L GWPNTYVFT
Sbjct: 181 GMAKKGDEKIDINFEKRMVQEKLNELKLENVPEKQITSAMKDFGIERARLFGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ K+ L LVIIRPT+V+ TYKEPFPGW+E ++TI+++ V +G + C +
Sbjct: 241 KAMGEMLLVNFKDGLPLVIIRPTMVASTYKEPFPGWIEGVRTIDSIIVGYGKGRVTCFIS 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ +DVIP DMVVNA+IVAMVA AKQ S+ IYH+GSS RNPV ++ D+ F YF++
Sbjct: 301 GPRSTLDVIPADMVVNAIIVAMVARAKQHSEI-IYHLGSSFRNPVNFSNLHDFSFRYFSE 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
PWINK+G+ VK+ K I+ SS++ F+ YM IR+LLPLK
Sbjct: 360 HPWINKEGESVKIGKGIVLSSMSKFYTYMAIRFLLPLK 397
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436687|ref|XP_002263127.1| PREDICTED: fatty acyl-CoA reductase 3 isoform 1 [Vitis vinifera] gi|296084944|emb|CBI28353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/389 (60%), Positives = 305/389 (78%), Gaps = 7/389 (1%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS+VEFLENK+ILV+G TGF+AK+F+E+ILR QPNVKKL+L +RA D SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
EV+ K++F VL+EKW + NSF+S+K+T VPGDIS +DLG+ DSNL+EE+W E+DI+VN
Sbjct: 61 EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GIN LG H+++FAKKCVK+K+ +HVSTAYVAGE++GLILE P
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G GLD + E K+++++L+EL+++GA ++ +TL MK+ G +RAK+HGWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEML+ KENL L I+RPT+VS TYKEPFPGWVE ++TI++ V +G L +G
Sbjct: 241 KAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEGIRTIDSFAVGYGKGRLTFFLG 300
Query: 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+DVIP DMVVN+MIVAM AHA QP + IY VGSS++NPV ++ D+G YFTK
Sbjct: 301 DIEAIVDVIPADMVVNSMIVAMAAHANQPCEV-IYQVGSSVKNPVRYSNLQDFGLRYFTK 359
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYM 383
PWINK GK VKV K+ + S++ SFH YM
Sbjct: 360 NPWINKDGKAVKVGKVTVLSTMDSFHRYM 388
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541412|ref|XP_003539171.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/400 (60%), Positives = 308/400 (77%), Gaps = 8/400 (2%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MELGS++ FL++K+IL++G TGF+AKV +EKILRVQPNVKKLYL +R D SA R N
Sbjct: 31 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRTEDAKSATHRLHN 90
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E++ KD+F VLKEK G NSF+S+K+T VPGDIS EDLGL+DS L+EE++++ D+++N
Sbjct: 91 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 150
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT GV +++NFAKKC KLKV VHVSTAYV GE R GLILE P
Sbjct: 151 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGREGLILEKPY 210
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAKL+GWPNTYV
Sbjct: 211 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 270
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK MGEML++Q K NLS+VIIRP++V+ T KEPFPGW E ++TI++L VA +G L C
Sbjct: 271 FTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 330
Query: 293 VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA +PSD IYH+GSS+R P+ + +YGF YF
Sbjct: 331 LGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSVRRPLRYGKLQEYGFRYF 390
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
T KP I+K G+PVKV K+ + S++ SF YM IRYLL LK
Sbjct: 391 TAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLK 430
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 399 | ||||||
| TAIR|locus:2134278 | 493 | CER4 "ECERIFERUM 4" [Arabidops | 0.979 | 0.793 | 0.515 | 8.3e-106 | |
| TAIR|locus:2076028 | 493 | FAR4 "fatty acid reductase 4" | 0.969 | 0.784 | 0.489 | 2.1e-100 | |
| TAIR|locus:2076023 | 496 | FAR5 "fatty acid reductase 5" | 0.982 | 0.790 | 0.491 | 3.1e-99 | |
| TAIR|locus:2171107 | 491 | FAR1 "fatty acid reductase 1" | 0.977 | 0.794 | 0.482 | 5.2e-97 | |
| TAIR|locus:2076038 | 496 | FAR8 "fatty acid reductase 8" | 0.982 | 0.790 | 0.478 | 2.9e-96 | |
| TAIR|locus:2176407 | 409 | FAR7 "fatty acid reductase 7" | 0.699 | 0.682 | 0.391 | 1.4e-72 | |
| TAIR|locus:2088664 | 616 | MS2 "MALE STERILITY 2" [Arabid | 0.939 | 0.608 | 0.379 | 1.5e-67 | |
| DICTYBASE|DDB_G0289081 | 1279 | DDB_G0289081 "phospholipid/gly | 0.446 | 0.139 | 0.314 | 3e-35 | |
| UNIPROTKB|Q96K12 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.288 | 0.223 | 0.327 | 4.2e-30 | |
| UNIPROTKB|Q0P5J1 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.380 | 0.295 | 0.290 | 6.2e-30 |
| TAIR|locus:2134278 CER4 "ECERIFERUM 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 205/398 (51%), Positives = 277/398 (69%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME+ SV+++L+NK+ILV G GF+A +F+EKILRV PNVKKLYL +RA+ SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNS 120
E+L KD+F VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLG ++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294
K MGEM++ +ENLSLV++RP++++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLK 392
KPW NK+GK VKV I + SS+ SFH YM IRYL+ LK
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401
|
|
| TAIR|locus:2076028 FAR4 "fatty acid reductase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 193/394 (48%), Positives = 269/394 (68%)
Query: 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
++FL +KTILV+GV GF+AKVF+EKILR+QP VKKL+L +RAAD +SA RF +EVL KD
Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65
Query: 67 VFNVLKEKWGTR-LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+F VLK G L +FI+EK+ +PGDIS ++LG+K S+L + +WNE+DI+VN AA T
Sbjct: 66 LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTN 125
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------LD 179
FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E L+
Sbjct: 126 FDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLN 185
Query: 180 GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239
G L + EM+++ QKL EL+ + ++EI+ MK+LG RAKLHGWPNTYVFTK+MGE
Sbjct: 186 GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGE 245
Query: 240 MLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKXX 299
ML+ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L+C + +
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305
Query: 300 XXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
HA + +YHVGSS +NP+T I D YFTK P +
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVR 365
Query: 360 KQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
+ G + VSK + S++A F YM +RY LPL++
Sbjct: 366 RDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399
|
|
| TAIR|locus:2076023 FAR5 "fatty acid reductase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 197/401 (49%), Positives = 272/401 (67%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
MEL + V+FL NKTILV+G TGF+AKVF+EKILRVQPNVKKLYL VRA+D ++A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV K++F VL++ G +LN+ + EK+ VPGDI+++ LG+ DS+L+E + E+DI+VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYDV GINT G ++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 178 ---LDGASGL--DFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ +GL D + E +++ Q+L EL + +++ITL MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
TK P ++ G + VSK+ ++A F YM +RY LPL++
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400
|
|
| TAIR|locus:2171107 FAR1 "fatty acid reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 193/400 (48%), Positives = 266/400 (66%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME + V+FL NKTIL++G GF+AKV +EKILR+QPNVKK+YL +RA D SA R ++
Sbjct: 1 ME-SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
EV+ D+F VL+ G LN+ + EKI VPGDIS ++LGLKD++L + +W+E+DI++N
Sbjct: 60 EVMEIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIIN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 120 IAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFK 179
Query: 178 ----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233
L G LD + E ++ QKL EL+ +EI+ MK+ G RAKLHGWPNTYVF
Sbjct: 180 MGETLSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVF 237
Query: 234 TKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293
TK MGEMLM + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L+C +
Sbjct: 238 TKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFL 297
Query: 294 GETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353
++ H+ IYHVGSS +NPVT + D+ YF
Sbjct: 298 ADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFA 357
Query: 354 KKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
K+P I + G P+ V K + S++A F YM +RY LPL++
Sbjct: 358 KRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397
|
|
| TAIR|locus:2076038 FAR8 "fatty acid reductase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 192/401 (47%), Positives = 263/401 (65%)
Query: 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQN 60
ME S V FL+NKTILV+G TGF+AKVF+EKILRVQPNV KLYL VRA+D ++A R +
Sbjct: 1 MEF-SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 59
Query: 61 EVLAKDVFNVLKEKWGT-RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
E KD+F VL++ G +LN+ +SEK+ V GDI+ + LG+KDSNL+E + E+DI+VN
Sbjct: 60 EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYD+ GINT G ++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 120 VAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFV 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAKLHGWPNTYV
Sbjct: 180 MEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL 292
FTK+MGEML+ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L+C
Sbjct: 240 FTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + HA +Y VGSS +NP+ I + F YF
Sbjct: 300 LVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYF 359
Query: 353 TKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
TK ++ G + VSK+ L ++A F YM IRY LP+++
Sbjct: 360 TKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQL 400
|
|
| TAIR|locus:2176407 FAR7 "fatty acid reductase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 112/286 (39%), Positives = 170/286 (59%)
Query: 114 LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173
L ++V ++ ++RYDVA GINT G I+++NFAKKCVK K+ +HVST YV GER G I
Sbjct: 41 LYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGHI 100
Query: 174 LEN------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+L+GW
Sbjct: 101 VEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGW 160
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
PNTYVFTK MGEML+ +E + +VIIRPT+++ T+ +PFPGW+E LKT++++ + +G
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 288 NLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDY 347
L+C + + K H +YHVGSS +NPV I +
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEM 280
Query: 348 GFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
YF K P + + G + V K+ S++A F Y +RY LP+++
Sbjct: 281 MSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQI 325
|
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| TAIR|locus:2088664 MS2 "MALE STERILITY 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 151/398 (37%), Positives = 232/398 (58%)
Query: 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV 62
LG ++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YL ++A ++A R +NEV
Sbjct: 122 LG-IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEV 180
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA 122
L ++FN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+D+++NSAA
Sbjct: 181 LDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAA 239
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP----- 177
T F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 240 NTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGD 299
Query: 178 -------LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +
Sbjct: 300 CIATENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQD 355
Query: 230 TYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289
TYVFTK MGEM++ ++ ++ +VIIRP+V+ TYK+PFPGW+E + ++ + + +G L
Sbjct: 356 TYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQL 415
Query: 290 RCLVGETKXXXXXXXXXXXXXXXXXXXXXHAKQPSDA----NIYHVGSSLRNPVTLVSIL 345
+ + K H SD N+Y + SS NP+ +
Sbjct: 416 TGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLA 475
Query: 346 DYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYM 383
+ + ++ P ++ +G P+ V + LF+S+ F ++
Sbjct: 476 ELLYNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHL 513
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| DICTYBASE|DDB_G0289081 DDB_G0289081 "phospholipid/glycerol acyltransferase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 60/191 (31%), Positives = 110/191 (57%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ F KT+L++G TGFV KV +EK++R P+++K+Y+ +R +A RF+ ++L
Sbjct: 4 LANFYAGKTVLITGATGFVGKVLLEKMVRDLPDIEKIYIIIRG----NAKERFEEDILQS 59
Query: 66 DVFNVLKEKWG-TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124
+++ K K G N+ I K+ + GD+S E LGL + + + ++++++++ AA
Sbjct: 60 RIWDTCKAKMGEAAFNAHIHNKVVAIGGDLSKEGLGLSSEDYQTVV-DQVNVIIHCAASI 118
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN-PLDGASG 183
F ER D A N +++++ +K+ + +VH STAYV R G + E P+
Sbjct: 119 DFRERLDKAISSNLYASLNMLDLSKRLKNVVAYVHCSTAYVNSNREGWLDEELPV----- 173
Query: 184 LDFDAEMKVID 194
LDF+ E +++D
Sbjct: 174 LDFNPE-EMVD 183
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| UNIPROTKB|Q96K12 FAR2 "Fatty acyl-CoA reductase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 203 (76.5 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 224 LHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA 283
+ WPN Y +TK +GEM++QQ NL++ IIRP++V T++EPFPGWV+++ N + +A
Sbjct: 197 IRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIA 256
Query: 284 SAQGNLRCLVGETKXXXXXXXXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNP 338
+ +G LR + A +P +YH+ S NP
Sbjct: 257 TGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNP 312
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| UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 206 (77.6 bits), Expect = 6.2e-30, Sum P(2) = 6.2e-30
Identities = 48/165 (29%), Positives = 85/165 (51%)
Query: 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV 62
+ + F K+IL++G TGF+ KV +EK+ R P++K +Y+ VR Q +
Sbjct: 1 MSMIAAFYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPK---------QGQT 51
Query: 63 LAKDVFNVLKEKWGTRLNSF---ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVN 119
L + VF +L K ++ + EKI + D++ D + ++KE L + +I+ +
Sbjct: 52 LQQRVFQILDSKLFEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKE-LLSHTNIIFH 110
Query: 120 SAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164
AA +FD+ A +N L+ A + KL+ F+H+STA+
Sbjct: 111 CAATVRFDDHLRHAVQLNVTATQQLLLMASQMPKLEAFIHISTAF 155
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q93ZB9 | FACR3_ARATH | 1, ., 2, ., 1, ., n, 2 | 0.5427 | 0.9799 | 0.7931 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.2.1.n2 | 0.914 |
| 3rd Layer | 1.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00011407001 | SubName- Full=Chromosome chr6 scaffold_305, whole genome shotgun sequence; (490 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 399 | |||
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.0 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-119 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-104 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 7e-80 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 3e-24 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 7e-20 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 5e-18 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-12 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 3e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-09 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 1e-08 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 4e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-05 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 8e-05 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 9e-05 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 2e-04 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 3e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 8e-04 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.002 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 0.004 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 247/398 (62%), Positives = 307/398 (77%), Gaps = 6/398 (1%)
Query: 2 ELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNE 61
E GS V+FLENKTILV+G TGF+AK+F+EKILRVQPNVKKLYL +RA+D SA R +E
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 62 VLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
V+ KD+F VL+EK G LNS ISEK+T VPGDIS +DLG+KDSNL+EE+W E+DI+VN A
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 122 AITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA GINTLG ++++NFAKKCVK+K+ +HVSTAYV GE++GLILE P
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMG 180
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235
L+G LD + E K++ +KL EL + A ++EIT MK+LG ERAKLHGWPNTYVFTK
Sbjct: 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240
Query: 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295
MGEML+ KENL LVIIRPT+++ TYKEPFPGW+E L+TI+++ V +G L C + +
Sbjct: 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLAD 300
Query: 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++DVIP DMVVNAMIVAM AHA IYHVGSSL+NPV ++ D+ + YF+K
Sbjct: 301 PNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360
Query: 356 PWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKV 393
PWINK+G PVKV K + S++ASF YM IRYLLPLK
Sbjct: 361 PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKA 398
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Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-119
Identities = 159/397 (40%), Positives = 245/397 (61%), Gaps = 25/397 (6%)
Query: 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
+ EFL K L++G TGF+AKV IEKILR P+V K+YL ++A D ++A R +NEV+
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
++F L+E G SF+ K+ V G++ +LGL + +L +E+ E+D+++NSAA T
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGL-EPDLADEIAKEVDVIINSAANTT 231
Query: 126 FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL------- 178
FDERYDVA INT G HL++FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIA 291
Query: 179 ----------DGASGLDFDAEMKV-IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227
LD +AE+K+ +D K + ++ QK MK+LG ERAKL+GW
Sbjct: 292 RELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQK-----MKDLGLERAKLYGW 346
Query: 228 PNTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
+TYVFTK MGEM++ + ++ +VIIRP+V+ T+K+PFPGW+E + ++ + + +G
Sbjct: 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKG 406
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSSLRNPVTLVSILD 346
L + + ++DV+P DMVVNA + AM H + N+Y + SS+ NP+ +
Sbjct: 407 QLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLAR 466
Query: 347 YGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYM 383
+ ++ P+++ +G+P+ V + LFSS+ F ++
Sbjct: 467 LLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHL 503
|
Length = 605 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-104
Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 26/345 (7%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K++L++G TGF+ KV +EK+LR P++ K+YL +R SA R + + K
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKL------ 54
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
G LN KI + GD+S +LGL D +L + L E++I+++ AA FDER D
Sbjct: 55 FDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDL-QTLIEEVNIIIHCAATVTFDERLDE 113
Query: 133 AFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKV 192
A IN LG + L+ AK+C KLK FVHVSTAYV G+R LI E D ++
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQ-LIEEKVY--PPPAD-PEKLID 169
Query: 193 IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252
I + +++L+ + A K L G PNTY FTK + E L+ + + NL LV
Sbjct: 170 ILELMDDLELERATPK--------------LLGGHPNTYTFTKALAERLVLKERGNLPLV 215
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I+RP++V T KEPFPGW+++ + LF+A +G LR + + + D+IPVD+V NA+
Sbjct: 216 IVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANAL 275
Query: 313 IVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ A ++P + +YH GSS NP T + Y K P
Sbjct: 276 LAAAAYSGVRKPRELEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 7e-80
Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 53/297 (17%)
Query: 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWG 76
++G TGF+ KV +EK+LR P VK +Y VRA D +SA R + E+L +F+ LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGI 136
E+I V GD+S +LGL D + +EL E+D+++++AA F E Y
Sbjct: 56 ------ALERIIPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRAT 108
Query: 137 NTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQK 196
N LG ++ AK+ K F HVSTAYV GER GL+ E P
Sbjct: 109 NVLGTREVLRLAKQM-KKLPFHHVSTAYVNGERGGLLEEKP------------------- 148
Query: 197 LNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVIIRP 256
K E A L G PN Y +K + E L++++ L +VI RP
Sbjct: 149 -----------------YKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRP 191
Query: 257 TVVSGTYKEPFPGWVEDLKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAM 312
++++G E GW+ + A G L ++G+ +D++PVD V NA+
Sbjct: 192 SIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-24
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 76/333 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+ V+G TGF+ + ++++L N K+ + VR+ + E
Sbjct: 1 VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSES--LGEAHERIEEA----------- 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++++ + GD++ +LGL + +E ++D +++ AA F + A+
Sbjct: 45 ------GLEADRVRVLEGDLTQPNLGLSAAASRELA-GKVDHVIHCAASYDFQAPNEDAW 97
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G H++ A + ++ F +VSTAYVAG R G I E L+
Sbjct: 98 RTNIDGTEHVLELAARL-DIQRFHYVSTAYVAGNREGNIRETELNPGQNF---------- 146
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254
N Y +K E L++ + + L +
Sbjct: 147 ---------------------------------KNPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMI 313
RP++V G K G +E + + L A G + G ++++PVD V +A I
Sbjct: 174 RPSIVVGDSKT---GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA-I 229
Query: 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
V + + I+H+ P TL I D
Sbjct: 230 VYLSKKPEANGQ--IFHLTD--PTPQTLREIAD 258
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 7e-20
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ + ++L+ + NV K+Y VRA D ++A R + LKE
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLID---------NLKE 50
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
+ +I V GD+S +LGL D + +EL E+D+++++ A + Y+
Sbjct: 51 YGLNLWDELELSRIKVVVGDLSKPNLGLSDDD-YQELAEEVDVIIHNGANVNWVYPYEEL 109
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG--ERTGL-------ILENPLDGASG 183
N LG L+ A KLK VST V E L +LE+ +G
Sbjct: 110 KPANVLGTKELLKLAAT-GKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNG 167
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 5e-18
Identities = 75/364 (20%), Positives = 135/364 (37%), Gaps = 88/364 (24%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
T+L++G TGF+ +E++LR K + VRAA + A R + + + +
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRSYRL------ 53
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
W E+I V GD+S LGL D+ E L +D +V++ A+ + Y
Sbjct: 54 -WHE---DLARERIEVVAGDLSEPRLGLSDAEW-ERLAENVDTIVHNGALVNWVYPYSEL 108
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV--AGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A + K +VST V A + + + ++
Sbjct: 109 RGANVLGTREVLRLAAS-GRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPP-------- 159
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
G Y +K + E+L++++ + L
Sbjct: 160 ----------------------------------GLAGGYAQSKWVAELLVREASDRGLP 185
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKT--INT----LFVASAQGNLRCLVGETKVIMDVIP 304
+ I+RP + G + T IN+ + L ++ D+ P
Sbjct: 186 VTIVRPGRILG-----------NSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDLTP 234
Query: 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKP 364
VD V A IV + + + ++HV + PV+L LD W+ + G
Sbjct: 235 VDFVARA-IVVLSSRPAASAGGPVFHVVN--PEPVSLDEFLD----------WLERAGYN 281
Query: 365 VKVS 368
+++
Sbjct: 282 LRLV 285
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 65/339 (19%), Positives = 131/339 (38%), Gaps = 65/339 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
+ +L++G TGF+ + ++L K+ VRA ++A R + D++
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEK---TFDLYRHWD 55
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E ++++ V GD++ DLGL + +EL +D+++++AA+ Y
Sbjct: 56 ELS--------ADRVEVVAGDLAEPDLGLSERTW-QELAENVDLIIHNAALVNHVFPYSE 106
Query: 133 AFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A K K +VS+ V + +F +
Sbjct: 107 LRGANVLGTAEVLRLA--ATGKPKPLHYVSSISV------------GETEYYSNFTVDFD 152
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN-LS 250
I N G Y +K + E L++++ + L
Sbjct: 153 EISPTRN------------------------VGQGLAGGYGRSKWVAEKLVREAGDRGLP 188
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310
+ I RP ++G + G + + L + Q L +++ +D++PVD V
Sbjct: 189 VTIFRPGYITGDSRT---GALNTRDFLTRLVLGLLQ--LGIA-PDSEYSLDMLPVDHVAR 242
Query: 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349
A++ + Q ++A I +G+ + +L +
Sbjct: 243 AVVAP----SVQVAEA-IAALGAHSDIRFNQLHMLTHPD 276
|
Length = 382 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 79/351 (22%), Positives = 137/351 (39%), Gaps = 68/351 (19%)
Query: 11 ENKTILVSGVTGFVAKVFIEKIL--RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVF 68
T+ ++G TGF+ + +L R N K ++ VRA ++ R + ++
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFK-VFAHVRAKSEEAGLERLRKTGTTYGIW 1028
Query: 69 NVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
E+W + +I V GD+S E GL D +L NE+D+++++ A+ +
Sbjct: 1029 ---DEEW--------ASRIEVVLGDLSKEKFGLSDEKWS-DLTNEVDVIIHNGALVHWVY 1076
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
Y N +G I+++N + K K F VS+ S LD +
Sbjct: 1077 PYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSS------------------TSALDTEY 1117
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKE 247
+ + D+ + G P+ + +L L Y +K + E + + K
Sbjct: 1118 YVNLSDELVQAGG-AGIPESD------DLMGSSKGLG---TGYGQSKWVAEYIIREAGKR 1167
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINT------LFVASAQGNLRCLVGETKVIMD 301
L I+RP V+G K NT + Q L + T V M
Sbjct: 1168 GLRGCIVRPGYVTGDSKT---------GATNTDDFLLRMLKGCIQLGLIPNINNT-VNM- 1216
Query: 302 VIPVDMVVNAMIVAMVA-HAKQPSDANIYHVGS--SLRNPVTLVSILDYGF 349
+PVD V A +V A + + S+ + HV +R L ++ YG+
Sbjct: 1217 -VPVDHV--ARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTYGY 1264
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 44/192 (22%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
V+G TGF+ + + ++L + +++ VR + R + L
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQSLS----RLEA----------LAA 46
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVA 133
WG +++ + GD++ LGL ++++ E ++D +V+ AAI YD+
Sbjct: 47 YWGA-------DRVVPLVGDLTEPGLGLSEADIAE--LGDIDHVVHLAAI------YDLT 91
Query: 134 FG------INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLD-- 185
N G ++V A++ ++ F HVS+ VAG+ G+ E+ D GL
Sbjct: 92 ADEEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTP 150
Query: 186 -----FDAEMKV 192
F+AE V
Sbjct: 151 YHRTKFEAEKLV 162
|
Length = 657 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 61/225 (27%)
Query: 114 LDIMVNSAAITKFDERYD---VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170
LD++V+ AA+ +D F N +G ++L+ A+K +K FV+ S+A V G
Sbjct: 31 LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPE 89
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230
GL P++E T P +
Sbjct: 90 GL---------------------------------PEEEETPPR-------------PLS 103
Query: 231 -YVFTKTMGEMLMQ--QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG 287
Y +K E L++ L +VI+R V G P D +N + +G
Sbjct: 104 PYGVSKLAAEHLLRSYGESYGLPVVILRLANVYG----PGQRPRLDGV-VNDFIRRALEG 158
Query: 288 NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332
+ G D I VD VV A++ A+ +Y++G
Sbjct: 159 KPLTVFGGGNQTRDFIHVDDVVRAILHAL---ENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 108 EELWNEL--DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161
E+ E D+++N+AA T D ++AF +N G +L A + +L VH+S
Sbjct: 43 LEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARL---VHIS 99
Query: 162 TAYV-AGERTGLILE----NPLD--GAS 182
T YV GE+ G E NPL+ G S
Sbjct: 100 TDYVFDGEKGGPYKETDTPNPLNVYGRS 127
|
Length = 281 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 3e-05
Identities = 58/341 (17%), Positives = 105/341 (30%), Gaps = 98/341 (28%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ +E++L +V R D L
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPLL---------------- 41
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DE 128
+ FV D++ DL + E D +++ AA +
Sbjct: 42 ------------SGVEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 129 RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
+N G ++L+ A+ +K FV S+ V
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYG-------------------- 122
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SK 246
P E + L N Y +K E L++
Sbjct: 123 ------------DPPPLPIDEDLGPPRPL-----------NPYGVSKLAAEQLLRAYARL 159
Query: 247 ENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305
L +VI+RP V G +P V + + + G+ D + V
Sbjct: 160 YGLPVVILRPFNVYGPGDKPDLSSGV----VSAFIRQLLKGEPIIVIGGDGSQTRDFVYV 215
Query: 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
D V +A+++A+ + D ++++GS +T+ + +
Sbjct: 216 DDVADALLLAL-----ENPDGGVFNIGSG-TAEITVRELAE 250
|
Length = 314 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 50/228 (21%), Positives = 77/228 (33%), Gaps = 73/228 (32%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYVAGERT 170
D++VN+AA T D E ++A+ +N LG +L A+ C +H+ST YV
Sbjct: 51 DVVVNAAAYTAVDKAESEPELAYAVNALGPGNL---AEACAARGAPLIHISTDYV----- 102
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKE--ITLFMKNLGTERAKLHGWP 228
FD KG P +E T P
Sbjct: 103 ---------------FDG-------------AKGGPYREDDPTG---------------P 119
Query: 229 -NTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDL-KTINTLFVASAQ 286
N Y TK GE + + +I+R V G Y F + L + L V Q
Sbjct: 120 LNVYGRTKLAGEQAVLAANPR--HLILRTAWVYGEYGNNFVKTMLRLAAERDELRVVDDQ 177
Query: 287 GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334
+ + +A++ + + P+ A YH+ S
Sbjct: 178 ------------LGSPTSARDLADALLALIRKRLRGPALAGTYHLAGS 213
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 9e-05
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 39/163 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
ILV+G GF+ F+ +L P+ K + N+ K
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYK--------------------------IINLDK 34
Query: 73 EKWGTRLNSF----ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE 128
+ L + S + FV GDI +L + L EE ++D +++ AA + D
Sbjct: 35 LTYAGNLENLEDVSSSPRYRFVKGDICDAELVDR---LFEE--EKIDAVIHFAAESHVDR 89
Query: 129 RYDVAFG---INTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
N LG L+ A+K +K FVH+ST V G+
Sbjct: 90 SISDPEPFIRTNVLGTYTLLEAARKY-GVKRFVHISTDEVYGD 131
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 115 DIMVNSAAITKFD--ERY-DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGERT 170
D +VN+AA T D E + AF +N L +L A + VH+ST YV GE
Sbjct: 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGK 109
Query: 171 GLILE----NPL 178
E NPL
Sbjct: 110 RPYREDDATNPL 121
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 44/175 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L K LV+G + +A+ + RV V A R E A+
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARV----------V-------VAARRSEEEAAE 45
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAA 122
+ +KE G + V D+S ++ ++ L E +DI+VN+A
Sbjct: 46 ALAAAIKEAGG--------GRAAAVAADVSDDEESVEA--LVAAAEEEFGRIDILVNNAG 95
Query: 123 ITKF--------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
I +E +D +N LG L A +K + V++S+ VAG
Sbjct: 96 IAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISS--VAGLG 148
|
Length = 251 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73
ILV+G GF+ F+ IL P+ + + L D + A +N L +
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVL-----DKLTYAGNLEN----------LAD 45
Query: 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD-- 131
+ + FV GDI D L E ++ D +V+ AA + D
Sbjct: 46 LED-------NPRYRFVKGDIG--DRELVSRLFTE---HQPDAVVHFAAESHVDRSISGP 93
Query: 132 VAF-GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167
AF N +G L+ +K F H+ST V G
Sbjct: 94 AAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 115 DIMVNSAAITKFDER---YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165
D+++N AA T+ D+ ++A+ +N L +L AK+ +H+ST YV
Sbjct: 57 DVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGAR--LIHISTDYV 108
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVF 68
L+ KTIL++G G + ++ IL V AADID AL E L K+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVI-------AADIDKEALNELLESLGKE-- 51
Query: 69 NVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121
F S+K++ V DI+ ++ + + E + ++D VN A
Sbjct: 52 -------------FKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91
|
Length = 256 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 399 | |||
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.98 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.98 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.98 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.97 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.97 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.97 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.96 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.96 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.96 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.96 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.96 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.96 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.96 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.96 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.96 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.96 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.96 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.95 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.95 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.95 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.95 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.95 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.95 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.94 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.94 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.93 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.93 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.93 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.93 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.93 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.93 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.92 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.91 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.91 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.88 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.84 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.84 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.84 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.84 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.83 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.82 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.82 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.82 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.81 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.81 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.8 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.8 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.8 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.79 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.79 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.77 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.77 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.77 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.76 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.75 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.75 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.75 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.74 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.74 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.74 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.74 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.73 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.73 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.72 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.72 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.72 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.71 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.71 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.7 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.7 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.69 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.69 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.68 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.68 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.68 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.68 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.68 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.68 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.67 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.67 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.66 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.66 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.66 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.66 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.66 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.66 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.65 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.65 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.65 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.64 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.64 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.64 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.64 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.63 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.63 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.63 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.63 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.62 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.61 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.61 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.61 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.61 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.6 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.6 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.6 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.6 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.6 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.59 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.57 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.55 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.55 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.54 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.53 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.53 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.5 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.49 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.49 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.48 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.48 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.47 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.45 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.45 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.45 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.42 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.42 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.41 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.41 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.41 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.4 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.38 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.38 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.35 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.29 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.29 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.28 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.26 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.23 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.23 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.21 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.19 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.17 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.14 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.11 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.11 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.1 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.09 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.09 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.06 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.05 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.04 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.01 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.97 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.96 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.76 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.7 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.69 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.6 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.54 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.52 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.44 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.42 | |
| PLN00106 | 323 | malate dehydrogenase | 98.36 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.26 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.22 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.17 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.02 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.97 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.81 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.77 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.67 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.67 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.59 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.58 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.57 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.48 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.26 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.17 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.15 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.14 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.07 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.98 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.95 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.94 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.88 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.69 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.6 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.58 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.57 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.56 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.56 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.54 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.49 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.43 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.39 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.34 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.28 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.21 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.18 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.03 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.02 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.0 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.89 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.87 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.7 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 95.66 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.48 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.41 | |
| PLN02602 | 350 | lactate dehydrogenase | 95.39 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 95.35 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.34 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.3 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.29 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.24 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.21 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 95.18 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.17 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.16 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.12 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.11 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.1 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.08 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.91 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 94.79 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 94.76 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 94.72 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 94.71 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 94.7 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.69 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.67 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.64 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 94.61 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 94.57 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.46 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 94.44 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.39 | |
| PRK08223 | 287 | hypothetical protein; Validated | 94.33 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 94.32 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 94.26 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 94.11 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 94.09 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 94.0 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 93.95 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 93.95 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 93.89 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 93.87 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 93.87 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 93.84 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 93.78 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 93.76 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 93.63 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.6 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 93.6 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 93.47 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.44 | |
| PRK07411 | 390 | hypothetical protein; Validated | 93.43 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 93.4 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 93.37 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 93.36 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 93.29 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 93.21 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 93.21 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 93.2 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 93.2 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.91 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 92.87 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 92.75 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 92.75 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 92.56 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 92.54 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 92.54 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 92.29 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 92.21 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 92.07 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 92.07 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 92.06 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 92.02 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 91.88 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 91.66 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 91.64 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 91.54 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.42 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 91.28 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.13 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 91.1 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 91.09 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 90.98 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 90.98 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 90.86 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 90.84 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 90.58 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 90.52 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 90.36 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 90.33 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 90.23 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 90.14 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 90.1 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 90.03 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 90.03 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 89.96 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 89.8 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 89.78 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 89.72 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 89.7 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 89.62 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 89.6 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 89.6 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 89.45 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 89.37 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 89.34 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 89.33 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 89.17 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 89.09 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 89.06 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 89.04 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 88.99 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 88.93 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 88.92 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 88.7 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 88.64 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 88.63 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 88.51 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 88.27 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 88.2 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 88.19 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 88.17 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 88.08 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.89 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 87.77 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 87.69 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 87.58 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 87.5 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 87.49 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 87.44 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 87.35 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 87.14 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 87.06 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 87.06 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 86.97 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 86.89 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 86.75 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 86.68 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 86.61 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.6 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 86.54 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 86.47 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 86.26 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 85.9 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 85.73 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 85.64 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 85.58 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 85.51 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 85.36 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 85.15 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.07 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 85.01 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 84.99 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 84.96 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 84.85 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 84.71 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 84.7 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 84.63 |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-50 Score=413.97 Aligned_cols=392 Identities=62% Similarity=1.035 Sum_probs=342.8
Q ss_pred cccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 015874 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 3 ~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
.+.+.++++||+|||||||||||++|+++|++.+++|.+|+|++|..+.....+|+..++.+.++|+.+++..+..+.+.
T Consensus 2 ~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~ 81 (491)
T PLN02996 2 EGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSL 81 (491)
T ss_pred cccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhh
Confidence 45788999999999999999999999999999899999999999999888888998888889999999998888766666
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
...+++++.||++++++|+++.+....+.+++|+|||+||.+++..++....++|+.|+.+++++|+++.++++|||+||
T Consensus 82 ~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 82 ISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred hhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 66899999999999999999888766778899999999999988888889999999999999999998657889999999
Q ss_pred ceeecCcCCccccccCCCCC------CCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 163 AYVAGERTGLILENPLDGAS------GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
.+|||...+.+.|.++++.. +.+++++.+.++.+...+...+.+++.++.-++.|++++.....+++.|+.||+
T Consensus 162 ~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~ 241 (491)
T PLN02996 162 AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA 241 (491)
T ss_pred eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence 99999877778888776322 236676666665556666666778888888899999999888899999999999
Q ss_pred HHHHHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 237 MGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 237 ~~E~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++|+++..+..+++++++||++|+|+.++|+++|+++......++.....|....+++++++.+|++||||||++++.++
T Consensus 242 ~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 242 MGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 99999988766899999999999999999999999988777788888888888888899999999999999999999998
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhhhHhhhhhccchhhh
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKVC 394 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
.........+.+||++++..+++|+.++++.+.+.++..|+..+.|+.+|.|.+.+..+.+.|+..+.+.+.+|...+
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~ 399 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKAL 399 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHH
Confidence 753211112579999987667899999999999999999999888899999999999999999999999999994443
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-44 Score=374.52 Aligned_cols=372 Identities=42% Similarity=0.760 Sum_probs=312.9
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+.++++||+|||||||||||++|+++|++.+++|.+|++++|.++...+.+|+.+++.+..+|+.+++..|....++...
T Consensus 113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 46899999999999999999999999999999999999999999888889999888999999999999988766666678
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++.++.||++++++|+++.+.. .+.+++|+|||+|+.+++..+++...++|+.++.+++++|+++.++++|||+||++|
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~-~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLAD-EIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHH-HHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 9999999999999999766554 667789999999999998888999999999999999999998756789999999999
Q ss_pred ecCcCCccccccCCCC-----------------CCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 015874 166 AGERTGLILENPLDGA-----------------SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
||...+.+.|..++.. .+.++++..++...++++ ...+......|+.++++++...++|
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~----~~~~~~~~~~l~~~g~~~~~~~~~p 347 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH----GFQSNSFAQKMKDLGLERAKLYGWQ 347 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhc----ccchHHHHHHhhhcccchhhhCCCC
Confidence 9998888999988632 234666665554333222 1234466777799999999999999
Q ss_pred chhhHhHHHHHHHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 229 NTYVFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+.|..+|+++|++++++..+++++|+||++|.+...+|++||.++.......+.....|..+.++++++...|+||||.|
T Consensus 348 NtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~v 427 (605)
T PLN02503 348 DTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMV 427 (605)
T ss_pred ChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHH
Confidence 99999999999999987668999999999999999999999999865544545445677777788999999999999999
Q ss_pred HHHHHHHHHhccCC-CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhhhH
Q 015874 309 VNAMIVAMVAHAKQ-PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGY 382 (399)
Q Consensus 309 a~~i~~~~~~~~~~-~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (399)
+++++.++...... ...+.+||++++..+|++|.++.+.+.+++...|+....+++++++.+.+......|...
T Consensus 428 vna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~h 502 (605)
T PLN02503 428 VNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSH 502 (605)
T ss_pred HHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcceeccCceehhhHHHHHHH
Confidence 99999996643322 123789999988889999999999999999998888777777777777776655544433
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=351.57 Aligned_cols=369 Identities=41% Similarity=0.650 Sum_probs=320.3
Q ss_pred CCcccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 1 ~~~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
|+.++..++++||+|||||||||+|+.++++|++..++|.+++.+.|.++...+.+|++..+.. ++|+.+++..|+.
T Consensus 1 ~~~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~-~lF~~l~~~~p~~-- 77 (467)
T KOG1221|consen 1 MEISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD-PLFEVLKEKKPEA-- 77 (467)
T ss_pred CCcccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh-hHHHHHHhhCccc--
Confidence 5666789999999999999999999999999999999999999999999999899999976655 9999999998884
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
.+++..+.||++++++|+++.+.. .+..++|+|||+||.+.|.+.++....+|..|+.+++++|+++.+.+-++|+
T Consensus 78 ---l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 78 ---LEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred ---eecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 589999999999999999999987 8889999999999999999999999999999999999999999889999999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||+++. ...+.+.|.++.+....+++....+.... +++-+... .+.--..+|+.|..+|+++|+
T Consensus 154 STAy~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~---------~~~~ld~~------~~~l~~~~PNTYtfTKal~E~ 217 (467)
T KOG1221|consen 154 STAYSN-CNVGHIEEKPYPMPETCNPEKILKLDENL---------SDELLDQK------APKLLGGWPNTYTFTKALAEM 217 (467)
T ss_pred ehhhee-cccccccccccCccccCCHHHHHhhhccc---------hHHHHHHh------hHHhcCCCCCceeehHhhHHH
Confidence 999998 55668999988766544555432222111 11111111 112223789999999999999
Q ss_pred HHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 241 ~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
++.+...+++++|+||++|.+...+|++||+++.+....++.....|.++.+..+.+...|+|++|.|+++++.+..+..
T Consensus 218 ~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~ 297 (467)
T KOG1221|consen 218 VIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHA 297 (467)
T ss_pred HHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHh
Confidence 99998888999999999999999999999999999988888899999999999999999999999999999998876544
Q ss_pred CCCC--CCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhhhHhhhhhccchhhhcc
Q 015874 321 KQPS--DANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKVCSK 396 (399)
Q Consensus 321 ~~~~--~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
.... .-.+||++++..++++|.++.+...+.+.+.|+.. .+|+|...+.++.+.|+..+.+.+.||..++|.
T Consensus 298 ~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~~----~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~ 371 (467)
T KOG1221|consen 298 GNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLEK----MIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDL 371 (467)
T ss_pred ccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCccc----ceeccCceeeecHhHHHHHHHHHHHhhHHHHHH
Confidence 3322 25699999999999999999999999988777774 699999999999999999999999999988763
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=272.42 Aligned_cols=293 Identities=22% Similarity=0.249 Sum_probs=221.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+||||||.+.+|++.|++|..+..++.... ....+ ....|++|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~--~~v~~---------------------------~~~~f~~g 51 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK--IALLK---------------------------LQFKFYEG 51 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH--HHhhh---------------------------ccCceEEe
Confidence 68999999999999999999999977644444433321 11110 11689999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|+. |.+.+.++++ ++|.|||+||..... +.+-++++.|+.||.+|++++++. ++++|||.||++|||
T Consensus 52 Di~-------D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG 123 (329)
T COG1087 52 DLL-------DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYG 123 (329)
T ss_pred ccc-------cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcC
Confidence 999 6667767775 699999999987643 567888999999999999999997 899999999999999
Q ss_pred CcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
.... +++|+ . +..|.|+||.||++.|++++.+
T Consensus 124 ~p~~~PI~E~-----~-----------------------------------------~~~p~NPYG~sKlm~E~iL~d~~ 157 (329)
T COG1087 124 EPTTSPISET-----S-----------------------------------------PLAPINPYGRSKLMSEEILRDAA 157 (329)
T ss_pred CCCCcccCCC-----C-----------------------------------------CCCCCCcchhHHHHHHHHHHHHH
Confidence 8753 34444 2 2356789999999999999988
Q ss_pred -hCCCcEEEEecCceecCCCC-CCCCcccCcchHHHHHHHhhcCccccc--c------CCCccccCeeeHHHHHHHHHHH
Q 015874 246 -KENLSLVIIRPTVVSGTYKE-PFPGWVEDLKTINTLFVASAQGNLRCL--V------GETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
..+++.+++|..++-|.... .+..+..+...+..++.....|....+ + .+|...||+|||.|+|++++.+
T Consensus 158 ~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~A 237 (329)
T COG1087 158 KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLA 237 (329)
T ss_pred HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHH
Confidence 66899999999999997752 233344455555666666666655432 2 4567899999999999999999
Q ss_pred HHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCC-CCCCccccccccccccchhhhhHhhhhh-ccch
Q 015874 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN-KQGKPVKVSKIILFSSIASFHGYMQIRY-LLPL 391 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 391 (399)
++.-.. .+...+||+|++ +..|+.|+++.++++.|.+.... .+.++-..+.....+.+....+.+...| .|..
T Consensus 238 l~~L~~-~g~~~~~NLG~G--~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ 312 (329)
T COG1087 238 LKYLKE-GGSNNIFNLGSG--NGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLED 312 (329)
T ss_pred HHHHHh-CCceeEEEccCC--CceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHH
Confidence 986433 332479999999 77999999999999999653333 3445556666666666667777777666 4443
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=266.25 Aligned_cols=258 Identities=22% Similarity=0.275 Sum_probs=210.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|++|||||.||||+++++.+++++++ ..|.++..=.-.. ..+..+. ..+++.|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~~~l~~~~-----------------------~~~~~~fv 56 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNLENLADVE-----------------------DSPRYRFV 56 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCHHHHHhhh-----------------------cCCCceEE
Confidence 68999999999999999999998876 3455553322111 1111111 13689999
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++|+. |.+.+.+++. ++|+|+|.||.++.+ ..+..++++|+.||.+||++++++....+|+|+||..|
T Consensus 57 ~~DI~-------D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEV 129 (340)
T COG1088 57 QGDIC-------DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEV 129 (340)
T ss_pred ecccc-------CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccc
Confidence 99999 6677778887 599999999998754 56788899999999999999999733469999999999
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
||+... .+..++|.+| ..|.++|+.||+.++.+++.+
T Consensus 130 YG~l~~--~~~~FtE~tp-----------------------------------------~~PsSPYSASKAasD~lVray 166 (340)
T COG1088 130 YGDLGL--DDDAFTETTP-----------------------------------------YNPSSPYSASKAASDLLVRAY 166 (340)
T ss_pred cccccC--CCCCcccCCC-----------------------------------------CCCCCCcchhhhhHHHHHHHH
Confidence 997642 1224555443 466789999999999999999
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
-.|++++|.|+++-|||++.| .+.+..++.+++.|++..++|+|.+.|||+||+|-|+++..++.+...
T Consensus 167 ~~TYglp~~ItrcSNNYGPyqfp-------EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-- 237 (340)
T COG1088 167 VRTYGLPATITRCSNNYGPYQFP-------EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-- 237 (340)
T ss_pred HHHcCCceEEecCCCCcCCCcCc-------hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC--
Confidence 679999999999999999954 255667788999999999999999999999999999999999975332
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
|++|||+++ +..+-.|+++.+++.+|+...
T Consensus 238 --GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 238 --GETYNIGGG--NERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred --CceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence 789999999 789999999999999997654
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=276.56 Aligned_cols=266 Identities=15% Similarity=0.179 Sum_probs=196.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+|||||||||||++|+++|+++| ++|+++.|...... ...... ...+ .....++.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~ 72 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQHNLDDVR-------------TSVS----EEQWSRFI 72 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcchhhhhhhh-------------hccc----cccCCceE
Confidence 456899999999999999999999999 45688887643221 111110 0000 00124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++.+|+.+ .+.+..+++++|+|||+|+..+.. +++....++|+.|+.+++++|++. ++++|||+||.++
T Consensus 73 ~~~~Di~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~v 144 (348)
T PRK15181 73 FIQGDIRK-------FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSST 144 (348)
T ss_pred EEEccCCC-------HHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHh
Confidence 99999994 445557778999999999976432 455677999999999999999996 8899999999999
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
||.... .+..|+. +..+.+.|+.+|.++|++++.+
T Consensus 145 yg~~~~----~~~~e~~-----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~ 179 (348)
T PRK15181 145 YGDHPD----LPKIEER-----------------------------------------IGRPLSPYAVTKYVNELYADVF 179 (348)
T ss_pred hCCCCC----CCCCCCC-----------------------------------------CCCCCChhhHHHHHHHHHHHHH
Confidence 996432 1111111 1134568999999999999877
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||++|||+++.+.... ...+..++.++..+....+.+++.+.+||+|++|+|++++.++......
T Consensus 180 ~~~~~~~~~~lR~~~vyGp~~~~~~~~---~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~- 255 (348)
T PRK15181 180 ARSYEFNAIGLRYFNVFGRRQNPNGAY---SAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA- 255 (348)
T ss_pred HHHhCCCEEEEEecceeCcCCCCCCcc---ccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccc-
Confidence 5689999999999999987432111 1234456666677776677788899999999999999999877532111
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
..+++||++++ .++|+.|+++.+.+.++.
T Consensus 256 ~~~~~yni~~g--~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 256 SKNKVYNVAVG--DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CCCCEEEecCC--CcEeHHHHHHHHHHHhCc
Confidence 12679999998 779999999999998863
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=267.71 Aligned_cols=246 Identities=32% Similarity=0.532 Sum_probs=159.4
Q ss_pred EecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCCC
Q 015874 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (399)
Q Consensus 17 VTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 96 (399)
|||||||+|++|+++|++.++.+ +|+|++|..+...+.+|+.+.+.+...+....+ ...++++++.||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~--------~~~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK--------EALSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H--------HHTTTEEEEE--TTS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh--------hhhccEEEEeccccc
Confidence 79999999999999999998765 899999999887788888877666555544321 124799999999999
Q ss_pred CCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCccccc
Q 015874 97 EDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN 176 (399)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~~~e~ 176 (399)
+.+||++.++. .+.+++|+|||+||.+++..+++.+.+.|+.|+.+++++|.+. +.++|+|+||+.+.+...+.+.|.
T Consensus 72 ~~lGL~~~~~~-~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 72 PNLGLSDEDYQ-ELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp GGGG--HHHHH-HHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SS
T ss_pred cccCCChHHhh-ccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccc
Confidence 99999877765 7888999999999999999999999999999999999999975 556999999977766655444333
Q ss_pred cCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-h-CCCcEEEE
Q 015874 177 PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K-ENLSLVII 254 (399)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~-~~~~~~i~ 254 (399)
.+.+.. .........+++|..|||.+|+++.++ + .|++++|+
T Consensus 150 ~~~~~~------------------------------------~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~ 193 (249)
T PF07993_consen 150 VYPEEE------------------------------------DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIY 193 (249)
T ss_dssp S-HHH--------------------------------------EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEE
T ss_pred cccccc------------------------------------ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 221000 001122356789999999999999988 3 49999999
Q ss_pred ecCceecCCCCCCCCcccCcchHHHHH-HHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 255 RPTVVSGTYKEPFPGWVEDLKTINTLF-VASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 255 Rp~~V~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
|||.|+|. +.+|+.........++ .....|..+..++..+..+|+++||.+|++|
T Consensus 194 Rp~~i~g~---~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 194 RPGIIVGD---SRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EE-EEE-S---SSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ecCccccc---CCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 99999994 3467777666344444 4455666666667777789999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=257.10 Aligned_cols=257 Identities=19% Similarity=0.239 Sum_probs=191.3
Q ss_pred EEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCC
Q 015874 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (399)
Q Consensus 16 lVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~ 95 (399)
|||||+||||++|+++|+++|+ ++.|.++.|........ ... ......++.+|++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------------~~~~~~~~~~Di~ 55 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------------KSGVKEYIQGDIT 55 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------------cccceeEEEeccc
Confidence 6999999999999999999996 46778888776543111 100 0123349999999
Q ss_pred CCCCCCCchhhHHHHhcCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC--
Q 015874 96 SEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG-- 171 (399)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~--~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~-- 171 (399)
+.+.+...++++|+|||+|+..... ...+.+.+.|+.||.+++++|++. ++++|||+||.++++....
T Consensus 56 -------d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~ 127 (280)
T PF01073_consen 56 -------DPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGD 127 (280)
T ss_pred -------cHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCC
Confidence 5666778899999999999987654 467778999999999999999996 8999999999999986221
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-h----
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K---- 246 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~---- 246 (399)
.+.. -+|..+. +..+.+.|+.||+++|++++++ .
T Consensus 128 ~~~~--~dE~~~~---------------------------------------~~~~~~~Y~~SK~~AE~~V~~a~~~~~~ 166 (280)
T PF01073_consen 128 PIIN--GDEDTPY---------------------------------------PSSPLDPYAESKALAEKAVLEANGSELK 166 (280)
T ss_pred Cccc--CCcCCcc---------------------------------------cccccCchHHHHHHHHHHHHhhcccccc
Confidence 1110 0111111 1124568999999999999987 3
Q ss_pred --CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC---
Q 015874 247 --ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK--- 321 (399)
Q Consensus 247 --~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~--- 321 (399)
..+.++++||+.|||+++.. +.. .+......|......+++....+++||+|||.+++.++++-..
T Consensus 167 ~g~~l~t~~lRP~~IyGp~d~~---~~~------~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~ 237 (280)
T PF01073_consen 167 NGGRLRTCALRPAGIYGPGDQR---LVP------RLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGK 237 (280)
T ss_pred cccceeEEEEeccEEeCccccc---ccc------hhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccc
Confidence 24899999999999998732 111 2233334454555667778899999999999999998764211
Q ss_pred -CCCCCcEEEecCCCCCccc-HHHHHHHHHHhhccCCC
Q 015874 322 -QPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKPW 357 (399)
Q Consensus 322 -~~~~~~~yni~~~~~~~~s-~~el~~~l~~~~~~~~~ 357 (399)
..-.|+.|+++++ .|+. ++++...+.+.+|.++.
T Consensus 238 ~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 238 PERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred cccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCCC
Confidence 1123899999999 7898 99999999999997653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=266.35 Aligned_cols=294 Identities=13% Similarity=0.093 Sum_probs=192.7
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe---cCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR---AADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R---~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
...+++|+|||||||||||++|++.|+++|++ |.++.| +..... ...+..........+..+.. .
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~ 110 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYE---VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE--------V 110 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeccccccccccccccccccccchHHHHHHHHH--------h
Confidence 45577899999999999999999999999955 466543 221100 00000000000000000000 0
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc------ccHHHHHHHhHHHHHHHHHHHHhccCC
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKL 154 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~------~~~~~~~~~n~~~~~~ll~~a~~~~~~ 154 (399)
...+++++.+|++ +.+.+..+++ ++|+|||+|+..... ......+++|+.|+.++++++++. ++
T Consensus 111 ~~~~v~~v~~Dl~-------d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv 182 (442)
T PLN02572 111 SGKEIELYVGDIC-------DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-AP 182 (442)
T ss_pred hCCcceEEECCCC-------CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CC
Confidence 1246889999999 4455555555 589999999875422 123455789999999999999986 66
Q ss_pred c-eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 155 K-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 155 ~-~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
+ +||++||.++||.....++|...+++.....+ .+..+..+.+.|+.
T Consensus 183 ~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~--------------------------------~~~~~~~P~s~Yg~ 230 (442)
T PLN02572 183 DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTD--------------------------------TLPYPKQASSFYHL 230 (442)
T ss_pred CccEEEEecceecCCCCCCCcccccccccccccc--------------------------------cccCCCCCCCcchh
Confidence 4 89999999999964333344322211000000 00012244578999
Q ss_pred hHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCC---CCcccC-------cchHHHHHHHhhcCccccccCCCccccC
Q 015874 234 TKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF---PGWVED-------LKTINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 234 sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
+|.++|.+++.+ ..+++++++||++|||+++.+. +..+.. ...+..++.+...|....+.+++.+.+|
T Consensus 231 SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rd 310 (442)
T PLN02572 231 SKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRG 310 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEEC
Confidence 999999999887 5699999999999999986321 111100 0234455666677766667788889999
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHh---hccC
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY---FTKK 355 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~---~~~~ 355 (399)
|+||+|+|++++.+++... ..+...+||+++ ..+|+.|+++.+++. +|.+
T Consensus 311 fi~V~Dva~a~~~al~~~~-~~g~~~i~Nigs---~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 311 FLDIRDTVRCIEIAIANPA-KPGEFRVFNQFT---EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred eEEHHHHHHHHHHHHhChh-hcCceeEEEeCC---CceeHHHHHHHHHHHHHhhCCC
Confidence 9999999999999987321 122236899976 359999999999998 7744
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=261.20 Aligned_cols=286 Identities=20% Similarity=0.251 Sum_probs=192.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
...+.|+|||||||||||++|+++|+++|. ++|.++.|+.... .++.. . + ......++
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g--~~V~~l~r~~~~~---~~l~~-------------~-~---~~~~~~~~ 67 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETP--HKVLALDVYNDKI---KHLLE-------------P-D---TVPWSGRI 67 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCC--CEEEEEecCchhh---hhhhc-------------c-c---cccCCCCe
Confidence 345668999999999999999999999831 4568887764321 11100 0 0 00012468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++.+|+++ .+.+..+++++|+|||+|+.... .......+..|+.++.+++++|++. + ++|||+||.+
T Consensus 68 ~~~~~Dl~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~ 138 (386)
T PLN02427 68 QFHRINIKH-------DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCE 138 (386)
T ss_pred EEEEcCCCC-------hHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeee
Confidence 999999994 45555777889999999997542 2344556778999999999999885 4 7999999999
Q ss_pred eecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc---ccCCCCchhhHhHHHHHH
Q 015874 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA---KLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 165 v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Y~~sK~~~E~ 240 (399)
+||...+ .++|. .|...+.....+ .++ ..+. ....+.+.|+.+|.++|+
T Consensus 139 vYg~~~~~~~~e~-----~p~~~~~~~~~~-----------~e~-----------~~~~~~~~~~~~~~~Y~~sK~~~E~ 191 (386)
T PLN02427 139 VYGKTIGSFLPKD-----HPLRQDPAFYVL-----------KED-----------ESPCIFGSIEKQRWSYACAKQLIER 191 (386)
T ss_pred eeCCCcCCCCCcc-----cccccccccccc-----------ccc-----------ccccccCCCCccccchHHHHHHHHH
Confidence 9996432 22221 111100000000 000 0000 001234679999999999
Q ss_pred HHHHh--hCCCcEEEEecCceecCCCCCCCCcc---cCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWV---EDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
++..+ ..+++++++||++|||+.....++.. ... ..+..++..+..+....+.+++.+.++|+||+|+|++++.
T Consensus 192 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~ 271 (386)
T PLN02427 192 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLL 271 (386)
T ss_pred HHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHH
Confidence 99876 56899999999999999863322211 011 2233344556666666666777888999999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+++...... +++||++++. .++|+.|+++.+.+.+|.
T Consensus 272 al~~~~~~~--g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 272 MIENPARAN--GHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred HHhCccccc--CceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 987422112 5799999861 369999999999999985
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=256.86 Aligned_cols=266 Identities=18% Similarity=0.199 Sum_probs=192.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||++|+++|+++ | +.|+++.|+.... .++. ...+++++.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~---~~V~~~~r~~~~~---~~~~-----------------------~~~~~~~~~ 52 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD---WEVYGMDMQTDRL---GDLV-----------------------NHPRMHFFE 52 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC---CeEEEEeCcHHHH---HHhc-----------------------cCCCeEEEe
Confidence 68999999999999999999986 5 4568887754321 1110 024688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+|+++ +.+.+..+.+++|+|||+|+.... ..++...+++|+.++.+++++|++. + ++|||+||.++||.
T Consensus 53 ~Dl~~------~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~ 124 (347)
T PRK11908 53 GDITI------NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGM 124 (347)
T ss_pred CCCCC------CHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeecc
Confidence 99973 333444667789999999997542 3556777899999999999999985 5 79999999999996
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
..+ .+.|+.. +.+. .+...+.+.|+.+|.++|+++..+
T Consensus 125 ~~~~~~~ee~~----~~~~-----------------------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~ 165 (347)
T PRK11908 125 CPDEEFDPEAS----PLVY-----------------------------------GPINKPRWIYACSKQLMDRVIWAYGM 165 (347)
T ss_pred CCCcCcCcccc----cccc-----------------------------------CcCCCccchHHHHHHHHHHHHHHHHH
Confidence 432 1222210 0000 000134467999999999999887
Q ss_pred hCCCcEEEEecCceecCCCCCCCCccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||+...+...... ....+..++.++..+....+.+++.+.++|||++|+|++++.++.......
T Consensus 166 ~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~- 244 (347)
T PRK11908 166 EEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVA- 244 (347)
T ss_pred HcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccC-
Confidence 578999999999999998643211111 113345566677777665666777889999999999999999987432111
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.+++||++++. +.+|+.|+++.+++.++..+
T Consensus 245 ~g~~yni~~~~-~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 245 SGKIYNIGNPK-NNHSVRELANKMLELAAEYP 275 (347)
T ss_pred CCCeEEeCCCC-CCcCHHHHHHHHHHHhcCcc
Confidence 15799999861 36999999999999998543
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=244.97 Aligned_cols=268 Identities=19% Similarity=0.190 Sum_probs=201.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+++|+|||||||||+||+++||.+| +.|++.+|+.++....+++++ + +...++...+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~k~~~~L~~-l------------------~~a~~~l~l~ 62 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDEKKTEHLRK-L------------------EGAKERLKLF 62 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchhhhHHHHHh-c------------------ccCcccceEE
Confidence 67899999999999999999999999 667999999987555444443 1 1234678999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccc--cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE--RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~--~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
.+|+. +.+.+...+++||.|||.|..+.+.. ...++++..+.|+.|++++|++.+.++|||++||+++...
T Consensus 63 ~aDL~-------d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 63 KADLL-------DEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred ecccc-------ccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 99999 66777788999999999999987643 2457899999999999999999866999999999877765
Q ss_pred cCCcc-ccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
..... +...++|.++.+.+... ....-|..||..+|+..+++
T Consensus 136 ~~~~~~~~~vvdE~~wsd~~~~~-----------------------------------~~~~~Y~~sK~lAEkaAw~fa~ 180 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWSDLDFCR-----------------------------------CKKLWYALSKTLAEKAAWEFAK 180 (327)
T ss_pred CCcCCCCCcccccccCCcHHHHH-----------------------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 42111 12233444433332221 01145999999999999988
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
+.+++++++.|+.|+||.-.+ ..+.....+.....|.....++ ....++||+|||++++.++++...
T Consensus 181 e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~n---~~~~~VdVrDVA~AHv~a~E~~~a---- 247 (327)
T KOG1502|consen 181 ENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYPN---FWLAFVDVRDVALAHVLALEKPSA---- 247 (327)
T ss_pred hCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCCC---CceeeEeHHHHHHHHHHHHcCccc----
Confidence 678999999999999988744 1223334556666765444433 345599999999999999985433
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
.+.|.+.+. ..++.|+++++.+.+...+..
T Consensus 248 ~GRyic~~~---~~~~~ei~~~l~~~~P~~~ip 277 (327)
T KOG1502|consen 248 KGRYICVGE---VVSIKEIADILRELFPDYPIP 277 (327)
T ss_pred CceEEEecC---cccHHHHHHHHHHhCCCCCCC
Confidence 356888884 366999999999999876633
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=262.04 Aligned_cols=254 Identities=15% Similarity=0.175 Sum_probs=189.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.|+|||||||||||++|+++|+++|+ +|+++.|...... ..... + ....+++++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~---~V~~ldr~~~~~~--~~~~~----------~----------~~~~~~~~~ 173 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGD---EVIVIDNFFTGRK--ENLVH----------L----------FGNPRFELI 173 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCccH--hHhhh----------h----------ccCCceEEE
Confidence 348999999999999999999999994 5577777532110 11000 0 001467888
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
.+|+.+. ...++|+|||+|+.... ..+....+++|+.++.+++++|++. ++ +||++||.+|||
T Consensus 174 ~~Di~~~------------~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg 239 (436)
T PLN02166 174 RHDVVEP------------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYG 239 (436)
T ss_pred ECccccc------------cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhC
Confidence 8888742 13479999999997542 3456788999999999999999986 54 899999999999
Q ss_pred CcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
...+ ..+|+.+.+.. +..+.+.|+.+|..+|++++.+
T Consensus 240 ~~~~~p~~E~~~~~~~-----------------------------------------p~~p~s~Yg~SK~~aE~~~~~y~ 278 (436)
T PLN02166 240 DPLEHPQKETYWGNVN-----------------------------------------PIGERSCYDEGKRTAETLAMDYH 278 (436)
T ss_pred CCCCCCCCccccccCC-----------------------------------------CCCCCCchHHHHHHHHHHHHHHH
Confidence 6532 33343221111 1234567999999999999987
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||++|||+..... .-..+..++.++..+....+++++.+.++|+|++|+|++++.+++. ..
T Consensus 279 ~~~~l~~~ilR~~~vYGp~~~~~-----~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~-~~--- 349 (436)
T PLN02166 279 RGAGVEVRIARIFNTYGPRMCLD-----DGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG-EH--- 349 (436)
T ss_pred HHhCCCeEEEEEccccCCCCCCC-----ccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc-CC---
Confidence 5689999999999999876321 1123445677777777777778888999999999999999998863 21
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.++||++++ +++|+.|+++.+++.+|...
T Consensus 350 -~giyNIgs~--~~~Si~ela~~I~~~~g~~~ 378 (436)
T PLN02166 350 -VGPFNLGNP--GEFTMLELAEVVKETIDSSA 378 (436)
T ss_pred -CceEEeCCC--CcEeHHHHHHHHHHHhCCCC
Confidence 358999998 77999999999999998643
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=253.59 Aligned_cols=256 Identities=18% Similarity=0.245 Sum_probs=186.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||+++++.|+++|++| +.+..|..... ....+.+ + ....++.++.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~--v~~~~~~~~~~-~~~~~~~-~-------------------~~~~~~~~~~~ 58 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDA--VVVVDKLTYAG-NLMSLAP-V-------------------AQSERFAFEKV 58 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCE--EEEEecCcccc-chhhhhh-c-------------------ccCCceEEEEC
Confidence 689999999999999999999999653 33333332211 1111110 0 01236788999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhc--------cCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~--------~~~~~~v~ 159 (399)
|+++ .+.+..+++ ++|+|||+||..... ..+...+++|+.++.++++++++. .++++||+
T Consensus 59 Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 59 DICD-------RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred CCcC-------hHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 9995 344445555 499999999986542 356778999999999999999863 24679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.++|+...+. ..+.+|+.+ ..+.+.|+.||.++|
T Consensus 132 ~SS~~vyg~~~~~--~~~~~E~~~-----------------------------------------~~p~s~Y~~sK~~~e 168 (355)
T PRK10217 132 ISTDEVYGDLHST--DDFFTETTP-----------------------------------------YAPSSPYSASKASSD 168 (355)
T ss_pred ecchhhcCCCCCC--CCCcCCCCC-----------------------------------------CCCCChhHHHHHHHH
Confidence 9999999864210 111222211 234568999999999
Q ss_pred HHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 240 ~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
.+++.+ +.+++++++||+.|||++..+ . ..+..++.+...+....+++++++.++|+|++|+|++++.++.
T Consensus 169 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~ 241 (355)
T PRK10217 169 HLVRAWLRTYGLPTLITNCSNNYGPYHFP-E------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT 241 (355)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCc-c------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh
Confidence 999877 568999999999999988632 1 2333455566666655566888899999999999999999987
Q ss_pred hccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
.. .. +++||++++ +++|+.|+++.+++.++.
T Consensus 242 ~~--~~--~~~yni~~~--~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 242 TG--KV--GETYNIGGH--NERKNLDVVETICELLEE 272 (355)
T ss_pred cC--CC--CCeEEeCCC--CcccHHHHHHHHHHHhcc
Confidence 42 12 579999999 779999999999999875
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=255.53 Aligned_cols=259 Identities=16% Similarity=0.088 Sum_probs=187.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|||||||||||+++++.|+++| +.|.++.|........ ....++++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~~~~---------------------------~~~~~~~~ 69 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEHMSE---------------------------DMFCHEFH 69 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEecccccccc---------------------------ccccceEE
Confidence 56899999999999999999999999 5568888764321000 00135678
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccC---c-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---F-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
.+|+++ .+.+.....++|+|||+|+..+ + ..........|+.++.+++++|++. ++++|||+||.++|
T Consensus 70 ~~Dl~d-------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vY 141 (370)
T PLN02695 70 LVDLRV-------MENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIY 141 (370)
T ss_pred ECCCCC-------HHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhc
Confidence 899994 4444466678999999998753 1 2344556788999999999999986 78999999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
+.......+..+.|+.+ .+..+.+.|+.+|.++|++++.+
T Consensus 142 g~~~~~~~~~~~~E~~~---------------------------------------~p~~p~s~Yg~sK~~~E~~~~~~~ 182 (370)
T PLN02695 142 PEFKQLETNVSLKESDA---------------------------------------WPAEPQDAYGLEKLATEELCKHYT 182 (370)
T ss_pred CCccccCcCCCcCcccC---------------------------------------CCCCCCCHHHHHHHHHHHHHHHHH
Confidence 96432111111222110 12244578999999999999887
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhc-CccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ-GNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||+.|||++..... ........++.++.. +....+++++.+.++|+|++|++++++.++... .
T Consensus 183 ~~~g~~~~ilR~~~vyGp~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~-- 256 (370)
T PLN02695 183 KDFGIECRIGRFHNIYGPFGTWKG---GREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-F-- 256 (370)
T ss_pred HHhCCCEEEEEECCccCCCCCccc---cccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-C--
Confidence 56899999999999998752211 011123344544443 344456688889999999999999999887632 1
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ .++|+.|+++.+.+..|.+.
T Consensus 257 --~~~~nv~~~--~~~s~~el~~~i~~~~g~~~ 285 (370)
T PLN02695 257 --REPVNIGSD--EMVSMNEMAEIALSFENKKL 285 (370)
T ss_pred --CCceEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 468999998 77999999999999888643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=257.79 Aligned_cols=255 Identities=14% Similarity=0.149 Sum_probs=188.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
-.++|+|||||||||||++|++.|+++|+ +|.++.|..... .+.... .....+++
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~---~V~~ld~~~~~~--~~~~~~--------------------~~~~~~~~ 170 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGD---SVIVVDNFFTGR--KENVMH--------------------HFSNPNFE 170 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcC---EEEEEeCCCccc--hhhhhh--------------------hccCCceE
Confidence 34679999999999999999999999995 457776643211 011100 00124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++.+|+.++ ...++|+|||+|+.... ..+....+++|+.++.+++++|++. ++ +|||+||..+
T Consensus 171 ~i~~D~~~~------------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~V 236 (442)
T PLN02206 171 LIRHDVVEP------------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEV 236 (442)
T ss_pred EEECCccCh------------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHH
Confidence 888998742 23479999999997542 3456788999999999999999986 54 8999999999
Q ss_pred ecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
|+.... ...|+.+.+.. +..+.+.|+.+|.++|+++..
T Consensus 237 Yg~~~~~p~~E~~~~~~~-----------------------------------------P~~~~s~Y~~SK~~aE~~~~~ 275 (442)
T PLN02206 237 YGDPLQHPQVETYWGNVN-----------------------------------------PIGVRSCYDEGKRTAETLTMD 275 (442)
T ss_pred hCCCCCCCCCccccccCC-----------------------------------------CCCccchHHHHHHHHHHHHHH
Confidence 986432 23333221111 113346799999999999987
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ ..+++++++||++|||+...... -..+..++.+...+....+++++++.++|+|++|+|++++.+++.. .
T Consensus 276 y~~~~g~~~~ilR~~~vyGp~~~~~~-----~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~--~ 348 (442)
T PLN02206 276 YHRGANVEVRIARIFNTYGPRMCIDD-----GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE--H 348 (442)
T ss_pred HHHHhCCCeEEEEeccccCCCCCccc-----cchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC--C
Confidence 7 46899999999999998752211 1223455666666666667788889999999999999999988632 1
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.++||++++ +++|+.|+++.+++.++..
T Consensus 349 ---~g~yNIgs~--~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 349 ---VGPFNLGNP--GEFTMLELAKVVQETIDPN 376 (442)
T ss_pred ---CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 358999998 7799999999999999754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=269.45 Aligned_cols=270 Identities=20% Similarity=0.245 Sum_probs=196.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+-++|+|||||||||||++|+++|+++ | ++|++++|..... .+.. ...+
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~---~~~~-----------------------~~~~ 361 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAI---SRFL-----------------------GHPR 361 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhh---hhhc-----------------------CCCc
Confidence 4567899999999999999999999985 6 5668888865321 1100 0246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++++.+|+++ ....+..+++++|+|||+||..+. ..+....+++|+.++.+++++|++. + ++|||+||.
T Consensus 362 ~~~~~gDl~d------~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~ 433 (660)
T PRK08125 362 FHFVEGDISI------HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTS 433 (660)
T ss_pred eEEEeccccC------cHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcch
Confidence 8899999995 233344566799999999997653 3456677899999999999999986 5 799999999
Q ss_pred eeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 164 ~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
++||...+ .++|+ .+..+ ..+...+.+.|+.||.++|+++
T Consensus 434 ~vyg~~~~~~~~E~-----~~~~~----------------------------------~~p~~~p~s~Yg~sK~~~E~~~ 474 (660)
T PRK08125 434 EVYGMCTDKYFDED-----TSNLI----------------------------------VGPINKQRWIYSVSKQLLDRVI 474 (660)
T ss_pred hhcCCCCCCCcCcc-----ccccc----------------------------------cCCCCCCccchHHHHHHHHHHH
Confidence 99996432 23333 11000 0000123457999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCc-ccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
+.+ ..+++++++||++|||+++...... ......+..++.++..+....+.+++.+.++|+|++|+|++++.+++..
T Consensus 475 ~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~ 554 (660)
T PRK08125 475 WAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENK 554 (660)
T ss_pred HHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhcc
Confidence 887 5689999999999999976321110 0111334556667776766666788889999999999999999998743
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
... ..+++||++++. +.+|+.|+++.+.+.+|..
T Consensus 555 ~~~-~~g~iyni~~~~-~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 555 DNR-CDGQIINIGNPD-NEASIRELAEMLLASFEKH 588 (660)
T ss_pred ccc-cCCeEEEcCCCC-CceeHHHHHHHHHHHhccC
Confidence 211 126799999872 2599999999999999854
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=269.62 Aligned_cols=265 Identities=24% Similarity=0.280 Sum_probs=194.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+++++|+|||||||||||++|+++|+++|+. ++|.++.|..... ....+.. .....++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~-~~~~l~~--------------------~~~~~~v 59 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCS-NLKNLNP--------------------SKSSPNF 59 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccc-hhhhhhh--------------------cccCCCe
Confidence 4677899999999999999999999998644 4677777643111 1111100 0012478
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
+++.+|+++ .+....++ .++|+|||+|+..... .....+.+.|+.++.++++++++...+++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 60 KFVKGDIAS-------ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred EEEECCCCC-------hHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 899999995 33333333 5799999999987643 23456789999999999999998644899999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++||....... ....|+ .+..+.+.|+.+|..+|+++
T Consensus 133 ~~vyg~~~~~~~-~~~~E~-----------------------------------------~~~~p~~~Y~~sK~~aE~~v 170 (668)
T PLN02260 133 DEVYGETDEDAD-VGNHEA-----------------------------------------SQLLPTNPYSATKAGAEMLV 170 (668)
T ss_pred hHHhCCCccccc-cCcccc-----------------------------------------CCCCCCCCcHHHHHHHHHHH
Confidence 999996532100 000111 11234578999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
..+ ..+++++++||++|||+.+.+ . ..+..++.....+....+++++.+.++|+|++|+|+++..++....
T Consensus 171 ~~~~~~~~l~~vilR~~~VyGp~~~~-----~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~ 243 (668)
T PLN02260 171 MAYGRSYGLPVITTRGNNVYGPNQFP-----E--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243 (668)
T ss_pred HHHHHHcCCCEEEECcccccCcCCCc-----c--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 877 568999999999999988632 1 2233455555666666667888889999999999999999886321
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
. +++||++++ +++|+.|+++.+++.+|..+
T Consensus 244 --~--~~vyni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 244 --V--GHVYNIGTK--KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred --C--CCEEEECCC--CeeEHHHHHHHHHHHhCCCC
Confidence 1 579999998 77999999999999998653
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=245.34 Aligned_cols=260 Identities=17% Similarity=0.201 Sum_probs=183.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|||||||||||++++++|+++| ++|.+++|+.+..... ... .+ . . ...++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~-~~~-~~---------~--------~-~~~~~~~ 64 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKNT-HLR-EL---------E--------G-GKERLIL 64 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhHH-HHH-Hh---------h--------C-CCCcEEE
Confidence 567899999999999999999999999 5568888875432110 000 00 0 0 1136888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc-eeecC
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVAGE 168 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~-~v~~~ 168 (399)
+.+|+++ .+.+..+++++|+|||+|+.. ...+...++.|+.++.+++++|++. ++++|||+||. ++|+.
T Consensus 65 ~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~--~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~ 134 (342)
T PLN02214 65 CKADLQD-------YEALKAAIDGCDGVFHTASPV--TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMD 134 (342)
T ss_pred EecCcCC-------hHHHHHHHhcCCEEEEecCCC--CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeecc
Confidence 9999994 445556778899999999975 3456778999999999999999986 78899999996 68875
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
.... ....++|+.+.+.+ .+..+.+.|+.+|.++|++++.+ .
T Consensus 135 ~~~~-~~~~~~E~~~~~~~-----------------------------------~~~~p~~~Y~~sK~~aE~~~~~~~~~ 178 (342)
T PLN02214 135 PNRD-PEAVVDESCWSDLD-----------------------------------FCKNTKNWYCYGKMVAEQAAWETAKE 178 (342)
T ss_pred CCCC-CCcccCcccCCChh-----------------------------------hccccccHHHHHHHHHHHHHHHHHHH
Confidence 3210 01112222211100 01134568999999999999887 5
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||++|||+...+. .. ..... +.....|..... + ...++||||+|+|++++.+++... . +
T Consensus 179 ~g~~~v~lRp~~vyGp~~~~~--~~---~~~~~-~~~~~~g~~~~~-~--~~~~~~i~V~Dva~a~~~al~~~~-~---~ 245 (342)
T PLN02214 179 KGVDLVVLNPVLVLGPPLQPT--IN---ASLYH-VLKYLTGSAKTY-A--NLTQAYVDVRDVALAHVLVYEAPS-A---S 245 (342)
T ss_pred cCCcEEEEeCCceECCCCCCC--CC---chHHH-HHHHHcCCcccC-C--CCCcCeeEHHHHHHHHHHHHhCcc-c---C
Confidence 689999999999999986431 11 11112 223344443332 2 457899999999999999997422 1 3
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+.||+++ .+.++.|+++.+.+.++.
T Consensus 246 g~yn~~~---~~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 246 GRYLLAE---SARHRGEVVEILAKLFPE 270 (342)
T ss_pred CcEEEec---CCCCHHHHHHHHHHHCCC
Confidence 5799987 348999999999999864
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=241.60 Aligned_cols=264 Identities=17% Similarity=0.166 Sum_probs=183.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..|++|||||||||||++++++|+++| ++|.+.+|+...........+ . .....++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~------~~~~~~~~~ 60 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDRKKTEHLLA-------------L------DGAKERLKL 60 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcchHHHHHHHh-------------c------cCCCCceEE
Confidence 457899999999999999999999999 556888887654322211110 0 001246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~--~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
+.+|+++ .+.+..+++++|+|||+|+..... ......++.|+.++.++++++++..++++||++||.++|.
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~ 133 (322)
T PLN02986 61 FKADLLE-------ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVL 133 (322)
T ss_pred EecCCCC-------cchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhee
Confidence 9999995 444557778899999999975432 2334568999999999999998853688999999987653
Q ss_pred CcCCcc-ccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 168 ERTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
...... .+..++|+.+..+.. ...+.+.|+.+|.++|.+++.+
T Consensus 134 ~~~~~~~~~~~~~E~~~~~p~~-----------------------------------~~~~~~~Y~~sK~~aE~~~~~~~ 178 (322)
T PLN02986 134 FRQPPIEANDVVDETFFSDPSL-----------------------------------CRETKNWYPLSKILAENAAWEFA 178 (322)
T ss_pred cCCccCCCCCCcCcccCCChHH-----------------------------------hhccccchHHHHHHHHHHHHHHH
Confidence 221111 111223322211100 0123467999999999999887
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
+.+++++++||+.|||+...+...+ ...++.....+... .+ .+.++|+|++|+|++++.++... ..
T Consensus 179 ~~~~~~~~~lrp~~v~Gp~~~~~~~~------~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~~~-~~-- 245 (322)
T PLN02986 179 KDNGIDMVVLNPGFICGPLLQPTLNF------SVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALETP-SA-- 245 (322)
T ss_pred HHhCCeEEEEcccceeCCCCCCCCCc------cHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhcCc-cc--
Confidence 5689999999999999976432111 11334444555432 22 45689999999999999999743 22
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.||+++ .++|+.|+++++.+.++.
T Consensus 246 -~~~yni~~---~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 246 -NGRYIIDG---PIMSVNDIIDILRELFPD 271 (322)
T ss_pred -CCcEEEec---CCCCHHHHHHHHHHHCCC
Confidence 34799954 569999999999999874
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=238.07 Aligned_cols=293 Identities=17% Similarity=0.178 Sum_probs=217.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
..+++|+||||.|||||||+.+|+.+||+| .++.--.+.. ..+++ +....+++
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~V---Ia~Dn~ftg~k~n~~~-----------------------~~~~~~fe 78 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEV---IALDNYFTGRKENLEH-----------------------WIGHPNFE 78 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeE---EEEecccccchhhcch-----------------------hccCccee
Confidence 456899999999999999999999999554 5543222111 01110 11123444
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC---ccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---FDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
.+--|+. +.++.++|.|+|+|+..+ +..++...+.+|+.++.+++-+|++. -+||++.||+.|
T Consensus 79 l~~hdv~------------~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv--~aR~l~aSTseV 144 (350)
T KOG1429|consen 79 LIRHDVV------------EPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV--GARFLLASTSEV 144 (350)
T ss_pred EEEeech------------hHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh--CceEEEeecccc
Confidence 4444444 457789999999999865 45677777889999999999999995 389999999999
Q ss_pred ecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
||+... ...|+.+ .++ .+.++.+-|...|..+|.++..
T Consensus 145 Ygdp~~hpq~e~yw-----g~v------------------------------------npigpr~cydegKr~aE~L~~~ 183 (350)
T KOG1429|consen 145 YGDPLVHPQVETYW-----GNV------------------------------------NPIGPRSCYDEGKRVAETLCYA 183 (350)
T ss_pred cCCcccCCCccccc-----ccc------------------------------------CcCCchhhhhHHHHHHHHHHHH
Confidence 998532 2222222 111 2335667899999999999998
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ +.|+.+.|.|+.++|||...-.+ + +.+..++.+.+++++..++++|.++|.|++|+|++++++++++....
T Consensus 184 y~k~~giE~rIaRifNtyGPrm~~~d----g-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~- 257 (350)
T KOG1429|consen 184 YHKQEGIEVRIARIFNTYGPRMHMDD----G-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR- 257 (350)
T ss_pred hhcccCcEEEEEeeecccCCccccCC----C-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc-
Confidence 8 78999999999999999874322 2 55567778889999999999999999999999999999999985443
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCC-----CCCCccccccccccccchhhhhHhhhhhccchhhhc
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN-----KQGKPVKVSKIILFSSIASFHGYMQIRYLLPLKVCS 395 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
..+|+|++ +.+|+.|+++++.+..+....+. +.+..-+.|++....-...++....+...||.++-.
T Consensus 258 ----~pvNiGnp--~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~ 329 (350)
T KOG1429|consen 258 ----GPVNIGNP--GEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTY 329 (350)
T ss_pred ----CCcccCCc--cceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHH
Confidence 34999999 78999999999999996433322 122224566666666666777777777777776643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-30 Score=245.66 Aligned_cols=279 Identities=22% Similarity=0.326 Sum_probs=204.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++||+||||||+|.+|+..|+.+-+ .+|+|++|.++.+.+..|+++.+..-.. |.+...++++.+.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~-----------~~e~~~~ri~vv~g 67 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRH-----------WDELSADRVEVVAG 67 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhh-----------hhhhhcceEEEEec
Confidence 5799999999999999999998654 6899999999998899998876642222 33445789999999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|+..+++|++..++. .+.+.+|.|||+||.+++-.+|++....|+.||..++++|... ++|.++|+||++|+......
T Consensus 68 Dl~e~~lGL~~~~~~-~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 68 DLAEPDLGLSERTWQ-ELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred ccccccCCCCHHHHH-HHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC
Confidence 999999999877765 8888999999999999999999999999999999999999995 89999999999999865421
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-hCCCcE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~~~~~ 251 (399)
-.+...++..+.-. ....+.++|++|||.+|.+++++ +.|+++
T Consensus 146 ~~~~~~~~~~~~~~------------------------------------~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv 189 (382)
T COG3320 146 NFTVDFDEISPTRN------------------------------------VGQGLAGGYGRSKWVAEKLVREAGDRGLPV 189 (382)
T ss_pred CCcccccccccccc------------------------------------ccCccCCCcchhHHHHHHHHHHHhhcCCCe
Confidence 11111111111000 11256789999999999999999 779999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc--------CCC
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA--------KQP 323 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~--------~~~ 323 (399)
+|+|||.|.|... +|......++.+++..+..- ..+| +....++.+++|++++++........ .+.
T Consensus 190 ~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~l--g~~P-~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~ 263 (382)
T COG3320 190 TIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQL--GIAP-DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSD 263 (382)
T ss_pred EEEecCeeeccCc---cCccccchHHHHHHHHHHHh--CCCC-CcccchhhCccceeeEEeehhhhhHHHHHHHhccCcc
Confidence 9999999999887 55555555556666654331 1222 22345666666666655543222110 111
Q ss_pred CCCcEEE-ecCCCCCcccHHHHHHHHHH
Q 015874 324 SDANIYH-VGSSLRNPVTLVSILDYGFV 350 (399)
Q Consensus 324 ~~~~~yn-i~~~~~~~~s~~el~~~l~~ 350 (399)
...+.|+ ..-+ ..+.+.++.+.+.+
T Consensus 264 ~~f~~~~~~~~~--~~i~l~~~~~w~~~ 289 (382)
T COG3320 264 IRFNQLHMLTHP--DEIGLDEYVDWLIS 289 (382)
T ss_pred chhhheecccCC--CccchhHHHHhHhh
Confidence 1134454 2224 66899999988887
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=244.38 Aligned_cols=263 Identities=15% Similarity=0.155 Sum_probs=188.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
|++||+|||||||||||+++++.|+++| ++|.++.|+........+... ...++.
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~----------------------~~~~~~ 55 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSPNLFELLN----------------------LAKKIE 55 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccchhHHHHHh----------------------hcCCce
Confidence 4678999999999999999999999999 456788887653321111000 013577
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++.+|+++ .+.+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++++...+++||++||.
T Consensus 56 ~~~~Dl~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~ 128 (349)
T TIGR02622 56 DHFGDIRD-------AAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD 128 (349)
T ss_pred EEEccCCC-------HHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 88999995 444445555 47999999996533 2456778999999999999999875337899999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
.+|+.... ...++|+. +..+.++|+.+|.++|.+++
T Consensus 129 ~vyg~~~~---~~~~~e~~-----------------------------------------~~~p~~~Y~~sK~~~e~~~~ 164 (349)
T TIGR02622 129 KCYRNDEW---VWGYRETD-----------------------------------------PLGGHDPYSSSKACAELVIA 164 (349)
T ss_pred hhhCCCCC---CCCCccCC-----------------------------------------CCCCCCcchhHHHHHHHHHH
Confidence 99986421 01111111 12345789999999999998
Q ss_pred Hh--h-------CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 244 QS--K-------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 244 ~~--~-------~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+ . .+++++++||+.|||++... . -..+..++.....|....+ +++++++||+|++|+|++++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~-----~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 165 SYRSSFFGVANFHGIKIASARAGNVIGGGDWA-E-----DRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHhhcccccCCCcEEEEccCcccCCCcch-h-----hhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHH
Confidence 76 1 38999999999999986511 1 1233455666666655444 567889999999999999998
Q ss_pred HHHhccCCC-CCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 315 AMVAHAKQP-SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 315 ~~~~~~~~~-~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.+....+ ..+++||++++...++|+.++++.+.+..+.
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 886421111 1146999997422579999999999987764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=240.20 Aligned_cols=263 Identities=15% Similarity=0.144 Sum_probs=183.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+||||||+||||++++++|+++|+ .|.+.+|+............ . .....+++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~-------------~------~~~~~~~~~~ 61 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY---TINATVRDPKDRKKTDHLLA-------------L------DGAKERLKLF 61 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCCcchhhHHHHHh-------------c------cCCCCceEEE
Confidence 468999999999999999999999994 56777777654322111100 0 0012468899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
.+|+++ .+....+++++|+|||+||.... ...+...+++|+.++.++++++.+..+.++||++||.++|+
T Consensus 62 ~~D~~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 62 KADLLD-------EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred eCCCCC-------chHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 999995 44455677889999999997542 23456778999999999999998853568999999998776
Q ss_pred CcCCc-cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 168 ERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
..... -.+...+|+.+..+.. ...+.+.|+.+|..+|++++.+
T Consensus 135 ~~~~~~~~~~~~~E~~~~~p~~-----------------------------------~~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 135 APETKLGPNDVVDETFFTNPSF-----------------------------------AEERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred cCCccCCCCCccCcCCCCchhH-----------------------------------hcccccchHHHHHHHHHHHHHHH
Confidence 43210 0111233333222110 0122367999999999999877
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||++|||+...+..+ ....++..+..+..+. + .+.++|+|++|+|++++.++.... .
T Consensus 180 ~~~~~~~~ilR~~~vyGp~~~~~~~------~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~~~~-~-- 246 (325)
T PLN02989 180 KDNEIDLIVLNPGLVTGPILQPTLN------FSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALETPS-A-- 246 (325)
T ss_pred HHcCCeEEEEcCCceeCCCCCCCCC------chHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhcCcc-c--
Confidence 468999999999999998743211 1223444555554332 2 346899999999999999987432 1
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.||+++ .++|+.|+++.+.+.++.
T Consensus 247 -~~~~ni~~---~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 247 -NGRYIIDG---PVVTIKDIENVLREFFPD 272 (325)
T ss_pred -CceEEEec---CCCCHHHHHHHHHHHCCC
Confidence 35799954 469999999999999974
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=242.21 Aligned_cols=265 Identities=16% Similarity=0.188 Sum_probs=179.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+||||||+||||++|+++|+++| ++|.+++|+............ + .. ..++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-~-----------------~~--~~~~~~ 63 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQKKIAHLRA-L-----------------QE--LGDLKI 63 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCHHHHHHHHh-c-----------------CC--CCceEE
Confidence 347899999999999999999999999 456788887543211111000 0 00 136889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-cc-HHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ER-YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~-~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
+.+|+++ .+.+...++++|+|||+|+..... .. ....+++|+.++.++++++.+..++++||++||.++|+
T Consensus 64 ~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 64 FGADLTD-------EESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEcCCCC-------hHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 9999994 444556778899999999975432 22 34567999999999999998854588999999999998
Q ss_pred CcC-----CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 168 ERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 168 ~~~-----~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
... ..+.|..++... . + ..+..+.++|+.||.++|.++
T Consensus 137 ~~~~~~~~~~~~E~~~~~~~-----~----~----------------------------~~~~~p~~~Y~~sK~~~E~~~ 179 (338)
T PLN00198 137 INKLSGTGLVMNEKNWTDVE-----F----L----------------------------TSEKPPTWGYPASKTLAEKAA 179 (338)
T ss_pred ccCCCCCCceeccccCCchh-----h----h----------------------------hhcCCccchhHHHHHHHHHHH
Confidence 532 123333221000 0 0 001134567999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccC-CCc----cccCeeeHHHHHHHHHHH
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG-ETK----VIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~v~Dva~~i~~~ 315 (399)
+.+ ..+++++++||++|||++.... ... .+ .++.....+....+.+ .+. ..+||+||+|+|++++.+
T Consensus 180 ~~~~~~~~~~~~~~R~~~vyGp~~~~~---~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~ 253 (338)
T PLN00198 180 WKFAEENNIDLITVIPTLMAGPSLTSD---IPS--SL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFL 253 (338)
T ss_pred HHHHHhcCceEEEEeCCceECCCccCC---CCC--cH-HHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHH
Confidence 987 4689999999999999986321 111 11 1233344444333322 222 247999999999999999
Q ss_pred HHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+.... . .+.|+ +++ .+.|+.|+++.+.+.++.
T Consensus 254 ~~~~~-~---~~~~~-~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 254 AEKES-A---SGRYI-CCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred hhCcC-c---CCcEE-Eec--CCCCHHHHHHHHHHHCCC
Confidence 87422 1 23575 444 558999999999988764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=238.55 Aligned_cols=262 Identities=16% Similarity=0.154 Sum_probs=179.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|||||||||||++|+++|+++| ++|.+++|+.........+.. + .....+++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~------------------~-~~~~~~~~~~ 60 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDPKKTEHLLA------------------L-DGAKERLHLF 60 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCchhhHHHHHh------------------c-cCCCCceEEE
Confidence 46899999999999999999999999 556888887643221111110 0 0012478899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccH-HHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee--e
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERY-DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV--A 166 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~-~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v--~ 166 (399)
.+|+++ .+.+..+++++|+|||+|+..... ... ...+++|+.++.++++++.+..++++||++||+++ |
T Consensus 61 ~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y 133 (322)
T PLN02662 61 KANLLE-------EGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAY 133 (322)
T ss_pred eccccC-------cchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcC
Confidence 999995 344456778999999999975432 223 36789999999999999987546889999999864 5
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
+.... ..+...+|+.+..+. ......+.|+.+|.++|++++.+
T Consensus 134 ~~~~~-~~~~~~~E~~~~~p~-----------------------------------~~~~~~~~Y~~sK~~~E~~~~~~~ 177 (322)
T PLN02662 134 NGKPL-TPDVVVDETWFSDPA-----------------------------------FCEESKLWYVLSKTLAEEAAWKFA 177 (322)
T ss_pred CCcCC-CCCCcCCcccCCChh-----------------------------------HhhcccchHHHHHHHHHHHHHHHH
Confidence 43210 011122222211110 00112357999999999999876
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||+...+... .....+.....|.. .. +.+.++|+|++|+|++++.++.... .
T Consensus 178 ~~~~~~~~~lRp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~-~~---~~~~~~~i~v~Dva~a~~~~~~~~~-~-- 244 (322)
T PLN02662 178 KENGIDMVTINPAMVIGPLLQPTLN------TSAEAILNLINGAQ-TF---PNASYRWVDVRDVANAHIQAFEIPS-A-- 244 (322)
T ss_pred HHcCCcEEEEeCCcccCCCCCCCCC------chHHHHHHHhcCCc-cC---CCCCcCeEEHHHHHHHHHHHhcCcC-c--
Confidence 568999999999999987633211 11233444444432 12 2357999999999999999997422 1
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
.+.||+++ .++|+.|+++.+.+.++.
T Consensus 245 -~~~~~~~g---~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 245 -SGRYCLVE---RVVHYSEVVKILHELYPT 270 (322)
T ss_pred -CCcEEEeC---CCCCHHHHHHHHHHHCCC
Confidence 24688874 569999999999998764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=242.12 Aligned_cols=259 Identities=16% Similarity=0.168 Sum_probs=186.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||++|+++|+++| ++|.++.|+.... .....+.+.. ......+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 60 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFNTQRIEHIYEDP-----------------HNVNKARMKLH 60 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccchhhhhhhhhcc-----------------ccccccceeEE
Confidence 689999999999999999999999 5568888875421 1111110000 00012468899
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEec
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVST 162 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~---~~~v~~SS 162 (399)
.+|++ +.+.+..+++ ++|+|||+|+..+.. ......+++|+.++.+++++|.+. ++ ++|||+||
T Consensus 61 ~~Dl~-------d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS 132 (343)
T TIGR01472 61 YGDLT-------DSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQAST 132 (343)
T ss_pred EeccC-------CHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEecc
Confidence 99999 4555556665 479999999986532 334566788999999999999985 43 48999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++||.... .+.+|+. +..+.+.|+.||.++|.++
T Consensus 133 ~~vyg~~~~----~~~~E~~-----------------------------------------~~~p~~~Y~~sK~~~e~~~ 167 (343)
T TIGR01472 133 SELYGKVQE----IPQNETT-----------------------------------------PFYPRSPYAAAKLYAHWIT 167 (343)
T ss_pred HHhhCCCCC----CCCCCCC-----------------------------------------CCCCCChhHHHHHHHHHHH
Confidence 999996421 1122222 1234578999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc-ccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
+.+ ..+++++..|+.++||+.... .+.. ..+..++..+..|.. ..+.+++++.+||+||+|+|++++.++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~ 243 (343)
T TIGR01472 168 VNYREAYGLFAVNGILFNHESPRRGE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD 243 (343)
T ss_pred HHHHHHhCCceEEEeecccCCCCCCc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC
Confidence 887 468899999999999986421 1111 223344555555543 344588889999999999999999988632
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
. .++||++++ +++|+.|+++.+++.+|..
T Consensus 244 -~----~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 244 -K----PDDYVIATG--ETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred -C----CccEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 1 257999999 7799999999999999854
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-28 Score=240.18 Aligned_cols=280 Identities=23% Similarity=0.341 Sum_probs=196.7
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|||||||||||++|+++|+++|+. .+|+|++|+.+.....+++.+.+..... ........+++++.+|
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~v~~~~~D 69 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRL----------WQEDLARERIEVVAGD 69 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCC----------CCchhhhCCEEEEeCC
Confidence 5899999999999999999999854 4689999987655455555433211000 0000011579999999
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCcc
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~~ 173 (399)
++++.+|+...+.. .+.+++|+|||+|+...+...+....+.|+.++.++++++.+. +.++|+++||.++|+.....
T Consensus 70 ~~~~~~gl~~~~~~-~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~- 146 (367)
T TIGR01746 70 LSEPRLGLSDAEWE-RLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLS- 146 (367)
T ss_pred cCcccCCcCHHHHH-HHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCC-
Confidence 99999998665554 6678899999999998877778888899999999999999985 77889999999999864321
Q ss_pred ccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-hCCCcEE
Q 015874 174 LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSLV 252 (399)
Q Consensus 174 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~~~~~~ 252 (399)
...++.+... ....+.++|+.+|+.+|.++..+ ..+++++
T Consensus 147 ---~~~~~~~~~~------------------------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ 187 (367)
T TIGR01746 147 ---TVTEDDAIVT------------------------------------PPPGLAGGYAQSKWVAELLVREASDRGLPVT 187 (367)
T ss_pred ---Cccccccccc------------------------------------cccccCCChHHHHHHHHHHHHHHHhcCCCEE
Confidence 0111110000 01123468999999999999887 5599999
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
++|||.|+|+.. ++.......+..++....... .++.......+++|++|+|++++.++........ +++||++
T Consensus 188 i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~-~~~~~v~ 261 (367)
T TIGR01746 188 IVRPGRILGNSY---TGAINSSDILWRMVKGCLALG--AYPDSPELTEDLTPVDYVARAIVALSSQPAASAG-GPVFHVV 261 (367)
T ss_pred EECCCceeecCC---CCCCCchhHHHHHHHHHHHhC--CCCCCCccccCcccHHHHHHHHHHHHhCCCcccC-CceEEec
Confidence 999999999744 222222122233333322211 2222222467899999999999998864322111 5799999
Q ss_pred CCCCCcccHHHHHHHHHHhhccC
Q 015874 333 SSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
++ +++++.|+++.+.+ .|..
T Consensus 262 ~~--~~~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 262 NP--EPVSLDEFLEWLER-AGYN 281 (367)
T ss_pred CC--CCCCHHHHHHHHHH-cCCC
Confidence 98 77999999999998 6653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=240.63 Aligned_cols=258 Identities=17% Similarity=0.202 Sum_probs=183.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++|+++ |.+..|..... ......+ + ....+++++.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~--v~~~~~~~~~~-~~~~~~~-~-------------------~~~~~~~~~~~ 57 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDS--VVNVDKLTYAG-NLESLAD-V-------------------SDSERYVFEHA 57 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCe--EEEecCCCccc-hHHHHHh-c-------------------ccCCceEEEEe
Confidence 589999999999999999999998642 34333322111 1111110 0 00245788999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhc--------cCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC--------VKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~--------~~~~~~v~ 159 (399)
|+++ .+.+..+++ ++|+|||+|+.... .......+++|+.++.+++++|++. .++++|||
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~ 130 (352)
T PRK10084 58 DICD-------RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHH 130 (352)
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEE
Confidence 9995 444445554 58999999997643 2346778999999999999999873 13568999
Q ss_pred EecceeecCcCC--cccc-c---cCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 160 VSTAYVAGERTG--LILE-N---PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 160 ~SS~~v~~~~~~--~~~e-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
+||.++|+.... .+.+ . .++|+ .+..+.+.|+.
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~~~E~-----------------------------------------~~~~p~~~Y~~ 169 (352)
T PRK10084 131 ISTDEVYGDLPHPDEVENSEELPLFTET-----------------------------------------TAYAPSSPYSA 169 (352)
T ss_pred ecchhhcCCCCccccccccccCCCcccc-----------------------------------------CCCCCCChhHH
Confidence 999999986321 0000 0 11221 12345678999
Q ss_pred hHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 234 TKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 234 sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+|.++|++++.+ ..+++++++|++.|||++..+ . ..+..++..+..+....+.+++++.++++|++|+|++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a 242 (352)
T PRK10084 170 SKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARA 242 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-c------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999876 568999999999999988522 1 1233445555555555566778899999999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.++.... . +++||++++ +++|+.|+++.+++.++.
T Consensus 243 ~~~~l~~~~--~--~~~yni~~~--~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 243 LYKVVTEGK--A--GETYNIGGH--NEKKNLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHhcCC--C--CceEEeCCC--CcCcHHHHHHHHHHHhcc
Confidence 998887321 1 579999998 779999999999999985
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=228.43 Aligned_cols=258 Identities=23% Similarity=0.289 Sum_probs=198.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc--ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI--DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.++|+||||.||||++.+..+...-++- +..++..=..- .+.++.++ ..++..
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~~~~l~~~~-----------------------n~p~yk 60 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSNLKNLEPVR-----------------------NSPNYK 60 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccccchhhhhc-----------------------cCCCce
Confidence 34899999999999999999999877663 33333211110 11222111 247899
Q ss_pred EEeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~~~---~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
|+++|+.+ ...+..++ +++|.|+|.|+..+... +.-+..+.|+.++..|++.++...++++|||+||.
T Consensus 61 fv~~di~~-------~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd 133 (331)
T KOG0747|consen 61 FVEGDIAD-------ADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD 133 (331)
T ss_pred Eeeccccc-------hHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc
Confidence 99999995 44443444 36999999999986542 33445778999999999999998789999999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
.|||++.+...++ |. ....|.++|+.+|+++|++++
T Consensus 134 eVYGds~~~~~~~---E~-----------------------------------------s~~nPtnpyAasKaAaE~~v~ 169 (331)
T KOG0747|consen 134 EVYGDSDEDAVVG---EA-----------------------------------------SLLNPTNPYAASKAAAEMLVR 169 (331)
T ss_pred ceecCcccccccc---cc-----------------------------------------ccCCCCCchHHHHHHHHHHHH
Confidence 9999886422211 11 123567899999999999999
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
.+ +.+++++++|.++||||.+-+ ...+..|+.....+..-.+.+++.+.+.++||+|+++++..++.+ +
T Consensus 170 Sy~~sy~lpvv~~R~nnVYGP~q~~-------~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K--g 240 (331)
T KOG0747|consen 170 SYGRSYGLPVVTTRMNNVYGPNQYP-------EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK--G 240 (331)
T ss_pred HHhhccCCcEEEEeccCccCCCcCh-------HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc--C
Confidence 99 789999999999999999833 355556777566667677789999999999999999999999985 2
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+. ++|||||++ .+.+..|+++.+++.+.+..
T Consensus 241 ~~--geIYNIgtd--~e~~~~~l~k~i~eli~~~~ 271 (331)
T KOG0747|consen 241 EL--GEIYNIGTD--DEMRVIDLAKDICELFEKRL 271 (331)
T ss_pred Cc--cceeeccCc--chhhHHHHHHHHHHHHHHhc
Confidence 22 789999999 78999999999999998743
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=237.08 Aligned_cols=245 Identities=17% Similarity=0.176 Sum_probs=171.7
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|||||||||||++|+++|+++|++ +.+++|+........ .+..+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~---~v~~~~~~~~~~~~~-------------------------------~~~~~~~ 47 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTKFV-------------------------------NLVDLDI 47 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc---eEEEecCCCcchHHH-------------------------------hhhhhhh
Confidence 899999999999999999999953 456666543221100 0122344
Q ss_pred CCCCCCCCchhhHHHHh-----cCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 95 SSEDLGLKDSNLKEELW-----NELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-----~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
.+... ..+.....+ .++|+|||+||..+.. ......++.|+.++.+++++|++. ++ +|||+||.++|+.
T Consensus 48 ~d~~~---~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~ 122 (308)
T PRK11150 48 ADYMD---KEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 122 (308)
T ss_pred hhhhh---HHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence 42110 122232333 2699999999865432 234567899999999999999986 55 6999999999996
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
..+ .+.|+ . +..+.+.|+.+|+++|++++.+
T Consensus 123 ~~~~~~~E~-----~-----------------------------------------~~~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 123 RTDDFIEER-----E-----------------------------------------YEKPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred CCCCCCccC-----C-----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 432 22222 1 1234578999999999999887
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc-CCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||++..+ .+... .....+..++..|..+.+. ++++..++++|++|+|++++.+++.. .
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~-~--- 229 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGH-KGSMA--SVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG-V--- 229 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCC-CCccc--hhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-C---
Confidence 568999999999999988633 11111 1122333456666554443 55677899999999999999888642 1
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+++||++++ .++|+.|+++.+.+.++.
T Consensus 230 -~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 230 -SGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred -CCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 359999998 779999999999999874
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=239.76 Aligned_cols=259 Identities=15% Similarity=0.100 Sum_probs=187.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.++|+|||||||||||++|+++|+++| ++|+++.|+.... ...+.+.+ . ......++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~-------------~-----~~~~~~~~ 62 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNTQRLDHIYI-------------D-----PHPNKARM 62 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccccchhhhcc-------------c-----cccccCce
Confidence 357899999999999999999999999 5568888865421 11111110 0 00012468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCc-----eE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLK-----VF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~-----~~ 157 (399)
.++.+|+++ .+.+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++.+. .++ +|
T Consensus 63 ~~~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~ 134 (340)
T PLN02653 63 KLHYGDLSD-------ASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKY 134 (340)
T ss_pred EEEEecCCC-------HHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeE
Confidence 899999994 444445554 47999999997543 2445667889999999999999986 443 89
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||.++||.....+ +|+.+ ..+.+.|+.||.+
T Consensus 135 v~~Ss~~vyg~~~~~~-----~E~~~-----------------------------------------~~p~~~Y~~sK~~ 168 (340)
T PLN02653 135 YQAGSSEMYGSTPPPQ-----SETTP-----------------------------------------FHPRSPYAVAKVA 168 (340)
T ss_pred EEeccHHHhCCCCCCC-----CCCCC-----------------------------------------CCCCChhHHHHHH
Confidence 9999999999754322 22221 2345789999999
Q ss_pred HHHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc-cCCCccccCeeeHHHHHHHHHH
Q 015874 238 GEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 238 ~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+|.+++.+ ..++.++..|+.++||+.... .+.. ..+..++.++..+....+ .+++++.+||+|++|+|++++.
T Consensus 169 ~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~ 244 (340)
T PLN02653 169 AHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWL 244 (340)
T ss_pred HHHHHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHH
Confidence 99999877 567888889999999986421 1111 222334445555554433 4888899999999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++... . .+.||++++ +++|+.|+++.+.+..|.
T Consensus 245 ~~~~~-~----~~~yni~~g--~~~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 245 MLQQE-K----PDDYVVATE--ESHTVEEFLEEAFGYVGL 277 (340)
T ss_pred HHhcC-C----CCcEEecCC--CceeHHHHHHHHHHHcCC
Confidence 99732 1 357999999 779999999999999985
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=238.53 Aligned_cols=263 Identities=16% Similarity=0.174 Sum_probs=176.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..|+|||||||||||++|+++|+++| ++|.+++|+............ . .....+++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~------~~~~~~~~~v 61 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANVKKVKHLLD-------------L------PGATTRLTLW 61 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchhHHHHHHHh-------------c------cCCCCceEEE
Confidence 35789999999999999999999999 566888887543222111000 0 0001368899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~--~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
.+|+++ .+.+..+++++|+|||+|+..... ......+++|+.++.++++++.+...+++|||+||.++|+.
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 62 KADLAV-------EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred EecCCC-------hhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 999994 444556777899999999976432 22346789999999999999998634789999999988764
Q ss_pred cCC---ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 169 RTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 169 ~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
... .++|+.+. +.+.. ..+..+.+.|+.||.++|.+++.+
T Consensus 135 ~~~~~~~~~E~~~~-----~~~~~--------------------------------~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (351)
T PLN02650 135 EEHQKPVYDEDCWS-----DLDFC--------------------------------RRKKMTGWMYFVSKTLAEKAAWKY 177 (351)
T ss_pred CCCCCCccCcccCC-----chhhh--------------------------------hccccccchHHHHHHHHHHHHHHH
Confidence 321 12233211 00000 001123357999999999999887
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||++|||+..... .... +...+ ....+.... .+.. ..++|+||+|+|++++.++.... .
T Consensus 178 ~~~~gi~~~ilRp~~v~Gp~~~~~--~~~~---~~~~~-~~~~~~~~~-~~~~-~~r~~v~V~Dva~a~~~~l~~~~-~- 247 (351)
T PLN02650 178 AAENGLDFISIIPTLVVGPFISTS--MPPS---LITAL-SLITGNEAH-YSII-KQGQFVHLDDLCNAHIFLFEHPA-A- 247 (351)
T ss_pred HHHcCCeEEEECCCceECCCCCCC--CCcc---HHHHH-HHhcCCccc-cCcC-CCcceeeHHHHHHHHHHHhcCcC-c-
Confidence 5699999999999999976431 1111 11111 112222221 2222 35899999999999999997422 1
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.| ++++ .++|+.|+++.+.+.++.
T Consensus 248 --~~~~-i~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 248 --EGRY-ICSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred --CceE-EecC--CCcCHHHHHHHHHHhCcc
Confidence 2468 4555 569999999999998764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-28 Score=233.49 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=186.4
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|+|||||||||++++++|++.|+. .+|.++.|..... ..++..+ + . ...++.++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~-~~~~~~~-~---------~----------~~~~~~~~~~D 58 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAG-NLENLAD-L---------E----------DNPRYRFVKGD 58 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcch-hhhhhhh-h---------c----------cCCCcEEEEcC
Confidence 5899999999999999999998744 3566666532111 0111110 0 0 01367889999
Q ss_pred CCCCCCCCCchhhHHHHhcC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+++ .+.+..++++ +|+|||+|+..... .....+++.|+.++.++++++.+.....++|++||.++||.
T Consensus 59 l~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 59 IGD-------RELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred CcC-------HHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 994 4444455655 99999999976432 45667789999999999999988522348999999999996
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
.... ..++|+.+ ..+.+.|+.+|+.+|++++.+ +
T Consensus 132 ~~~~---~~~~e~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~~~ 167 (317)
T TIGR01181 132 LEKG---DAFTETTP-----------------------------------------LAPSSPYSASKAASDHLVRAYHRT 167 (317)
T ss_pred CCCC---CCcCCCCC-----------------------------------------CCCCCchHHHHHHHHHHHHHHHHH
Confidence 4321 11222211 133467999999999999876 5
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.|||+...+ ...+..++.....+....+.+++++.++++|++|+|+++..++... .. +
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~--~~--~ 236 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFP-------EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG--RV--G 236 (317)
T ss_pred hCCCeEEEEeccccCCCCCc-------ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC--CC--C
Confidence 68999999999999987532 1233455666666665556677888999999999999999998632 22 5
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
++||++++ .++|+.|+++.+.+.++..
T Consensus 237 ~~~~~~~~--~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 237 ETYNIGGG--NERTNLEVVETILELLGKD 263 (317)
T ss_pred ceEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 79999998 7799999999999999864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=225.47 Aligned_cols=228 Identities=25% Similarity=0.406 Sum_probs=178.1
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|||||||||||++++++|+++|+ .|+.+.|+......... ..++.++.+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~---~v~~~~~~~~~~~~~~~--------------------------~~~~~~~~~dl 51 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH---EVIVLSRSSNSESFEEK--------------------------KLNVEFVIGDL 51 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT---EEEEEESCSTGGHHHHH--------------------------HTTEEEEESET
T ss_pred EEEEccCCHHHHHHHHHHHHcCC---ccccccccccccccccc--------------------------cceEEEEEeec
Confidence 79999999999999999999994 45788888765422111 13789999999
Q ss_pred CCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 95 SSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
. +.+...++++ ++|+|||+|+.... .......++.|+.++.++++++++. ++++||++||..+|+..
T Consensus 52 ~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 52 T-------DKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp T-------SHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSS
T ss_pred c-------ccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9 4555556665 46999999998632 2566778899999999999999996 77999999999999987
Q ss_pred CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 170 ~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
.. .++|+.. ..+.+.|+.+|..+|++++.+ .
T Consensus 124 ~~~~~~e~~~----------------------------------------------~~~~~~Y~~~K~~~e~~~~~~~~~ 157 (236)
T PF01370_consen 124 DGEPIDEDSP----------------------------------------------INPLSPYGASKRAAEELLRDYAKK 157 (236)
T ss_dssp SSSSBETTSG----------------------------------------------CCHSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccc----------------------------------------------cccccccccccccccccccccccc
Confidence 32 3333322 133567999999999999988 4
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.|||+.. + .. .....+..++..+..++...+++++++.++++|++|+|++++.++.... .. +
T Consensus 158 ~~~~~~~~R~~~vyG~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~--~ 230 (236)
T PF01370_consen 158 YGLRVTILRPPNVYGPGN-P-NN--NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK-AA--G 230 (236)
T ss_dssp HTSEEEEEEESEEESTTS-S-SS--STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC-TT--T
T ss_pred cccccccccccccccccc-c-cc--ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC-CC--C
Confidence 589999999999999981 1 11 1224455677788888877778889999999999999999999998654 22 6
Q ss_pred cEEEec
Q 015874 327 NIYHVG 332 (399)
Q Consensus 327 ~~yni~ 332 (399)
++||++
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 899986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=233.94 Aligned_cols=271 Identities=17% Similarity=0.170 Sum_probs=187.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.+|+|+|||||||||++|+++|+++| +.|.+++|...... ...+..+. . .....++.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~~~-------------~-----~~~~~~~~ 61 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVKEL-------------A-----GDLGDNLV 61 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHHHh-------------h-----cccCccce
Confidence 567899999999999999999999999 45678776543211 11111110 0 00124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++.+|+++ .+.+..+++ ++|+|||+|+.... ...+...++.|+.++.++++++.+. ++++||++||+
T Consensus 62 ~~~~D~~~-------~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (352)
T PLN02240 62 FHKVDLRD-------KEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA 133 (352)
T ss_pred EEecCcCC-------HHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH
Confidence 89999995 444445444 68999999997542 2456778999999999999999885 78899999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
++|+...+ .+++|+.+ ..+.+.|+.+|.++|++++
T Consensus 134 ~vyg~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 134 TVYGQPEE----VPCTEEFP-----------------------------------------LSATNPYGRTKLFIEEICR 168 (352)
T ss_pred HHhCCCCC----CCCCCCCC-----------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99985432 12223222 2345789999999999998
Q ss_pred Hh---hCCCcEEEEecCceecCCCCCCCCcc--cCcchHHHHHHHhhcCcccc--cc------CCCccccCeeeHHHHHH
Q 015874 244 QS---KENLSLVIIRPTVVSGTYKEPFPGWV--EDLKTINTLFVASAQGNLRC--LV------GETKVIMDVIPVDMVVN 310 (399)
Q Consensus 244 ~~---~~~~~~~i~Rp~~V~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~i~v~Dva~ 310 (399)
.+ ..+++++++|++++||++....-+.. .....+..++..+..+..+. +. +++.+.++|+|++|+|+
T Consensus 169 ~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~ 248 (352)
T PLN02240 169 DIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD 248 (352)
T ss_pred HHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence 76 24689999999999997642111100 00112223444444443222 22 25688999999999999
Q ss_pred HHHHHHHhccCC-CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 311 AMIVAMVAHAKQ-PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 311 ~i~~~~~~~~~~-~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++.++...... ...+++||++++ +++|+.|+++.+.+.+|.+.
T Consensus 249 a~~~a~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 293 (352)
T PLN02240 249 GHIAALRKLFTDPDIGCEAYNLGTG--KGTSVLEMVAAFEKASGKKI 293 (352)
T ss_pred HHHHHHhhhhhccCCCCceEEccCC--CcEeHHHHHHHHHHHhCCCC
Confidence 999888642111 111579999998 77999999999999998643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=254.46 Aligned_cols=268 Identities=23% Similarity=0.350 Sum_probs=190.2
Q ss_pred cEEEEecCcchhHHHHHHHHHH--hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~--~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||++|+++|++ .| ++|++++|+.... ....+. ..+ ...+++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~~-~~~~~~-------------~~~-------~~~~v~~~ 56 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSLS-RLEALA-------------AYW-------GADRVVPL 56 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchHH-HHHHHH-------------Hhc-------CCCcEEEE
Confidence 5899999999999999999994 56 6779999964321 111111 011 11578999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|+++++.++..... ..+ .++|+|||+||..+.........+.|+.++.++++++.+. ++++|||+||.++||...
T Consensus 57 ~~Dl~~~~~~~~~~~~-~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~ 133 (657)
T PRK07201 57 VGDLTEPGLGLSEADI-AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE 133 (657)
T ss_pred ecccCCccCCcCHHHH-HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc
Confidence 9999988776643433 344 8899999999988776677778899999999999999986 789999999999998654
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
+...|....+ +..+.++|+.+|+.+|+++++. .+++
T Consensus 134 ~~~~e~~~~~-------------------------------------------~~~~~~~Y~~sK~~~E~~~~~~-~g~~ 169 (657)
T PRK07201 134 GVFREDDFDE-------------------------------------------GQGLPTPYHRTKFEAEKLVREE-CGLP 169 (657)
T ss_pred Cccccccchh-------------------------------------------hcCCCCchHHHHHHHHHHHHHc-CCCc
Confidence 4333332211 1133467999999999999853 5899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcC-ccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
++++||+.|||+.......-......+..++...... ....+.+.+...++++|++|+|+++..++.. .... +++|
T Consensus 170 ~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~-~~~~--g~~~ 246 (657)
T PRK07201 170 WRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK-DGRD--GQTF 246 (657)
T ss_pred EEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC-cCCC--CCEE
Confidence 9999999999986521100001111122223332111 1112234445678999999999999998863 2222 6799
Q ss_pred EecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
|++++ +++|+.|+++.+.+.+|.+.
T Consensus 247 ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 247 HLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred EeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 99998 77999999999999998765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=229.32 Aligned_cols=250 Identities=22% Similarity=0.271 Sum_probs=188.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++| +.|+.+.|........ ...+.++.+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~----------------------------~~~~~~~~~ 49 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDPL----------------------------LSGVEFVVL 49 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCcccccc----------------------------ccccceeee
Confidence 459999999999999999999999 5568888876543211 035778899
Q ss_pred cCCCCCCCCCchhhHHHHhcCc-cEEEEcccccCccc----cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWNEL-DIMVNSAAITKFDE----RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~-D~Vih~Aa~~~~~~----~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|+++ .+........+ |+|||+|+...... ++...++.|+.++.+++++|++ .++++|||.||.++|+
T Consensus 50 d~~~-------~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~ 121 (314)
T COG0451 50 DLTD-------RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVY 121 (314)
T ss_pred cccc-------hHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceEC
Confidence 9994 35554556666 99999999876532 2456899999999999999999 4899999999888888
Q ss_pred Cc-CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 168 ER-TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 168 ~~-~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
.. .+ .++|+. .+ ..+.+.|+.+|+++|+++..+
T Consensus 122 ~~~~~~~~~E~~----~~-----------------------------------------~~p~~~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 122 GDPPPLPIDEDL----GP-----------------------------------------PRPLNPYGVSKLAAEQLLRAY 156 (314)
T ss_pred CCCCCCCccccc----CC-----------------------------------------CCCCCHHHHHHHHHHHHHHHH
Confidence 54 11 233332 11 122337999999999999988
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc-ccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++++||+.|||+...+. +.. .....++.....+.. ..+.+++...++++|++|+|++++.+++....
T Consensus 157 ~~~~~~~~~ilR~~~vyGp~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~- 231 (314)
T COG0451 157 ARLYGLPVVILRPFNVYGPGDKPD--LSS--GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG- 231 (314)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCCC--CCc--CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC-
Confidence 3589999999999999997432 111 122233444555554 45556777889999999999999999984332
Q ss_pred CCCCcEEEecCCCCC-cccHHHHHHHHHHhhccCCC
Q 015874 323 PSDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 323 ~~~~~~yni~~~~~~-~~s~~el~~~l~~~~~~~~~ 357 (399)
. .||++++ . +.++.|+++.+.+.++..+.
T Consensus 232 ---~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 232 ---G-VFNIGSG--TAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred ---c-EEEeCCC--CCcEEHHHHHHHHHHHhCCCCc
Confidence 3 8999998 5 79999999999999997654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=227.13 Aligned_cols=298 Identities=18% Similarity=0.173 Sum_probs=219.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++||||||.||||+|.+.+|+++|+.|..|..++|+-. .++.|.+..+ ++ ..++.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~--~sl~r~~~l~-------------~~------~~~v~f~~ 60 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYL--ESLKRVRQLL-------------GE------GKSVFFVE 60 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccch--hHHHHHHHhc-------------CC------CCceEEEE
Confidence 579999999999999999999999999988888888763 3455554322 11 47899999
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|+. |...++++++ ++|.|+|.|+.... -+.+..+...|+.|+.++++.+++. +++.+|+.||+.||
T Consensus 61 ~Dl~-------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvY 132 (343)
T KOG1371|consen 61 GDLN-------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVY 132 (343)
T ss_pred eccC-------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeee
Confidence 9999 6777778776 58999999998654 2556777888999999999999997 69999999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
|.... -+++|..+. ..|.++|+.+|.+.|.++...
T Consensus 133 G~p~~----ip~te~~~t----------------------------------------~~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 133 GLPTK----VPITEEDPT----------------------------------------DQPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred cCcce----eeccCcCCC----------------------------------------CCCCCcchhhhHHHHHHHHhhh
Confidence 98653 233332221 136788999999999999987
Q ss_pred -hCCCcEEEEecCceec--CCCCC---CCCcccCcchHHHHHHHhhcCccccc--------cCCCccccCeeeHHHHHHH
Q 015874 246 -KENLSLVIIRPTVVSG--TYKEP---FPGWVEDLKTINTLFVASAQGNLRCL--------VGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~v~Dva~~ 311 (399)
..++.++.+|..+++| +...+ ..+...+ +...+...+.+..+.+ ..++...+|.||+-|.|++
T Consensus 169 ~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nn---l~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~ 245 (343)
T KOG1371|consen 169 KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNN---LLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADG 245 (343)
T ss_pred ccccceEEEEEeccccCccccCccCCCCccCccc---ccccccchhhcccccceeecCcccccCCCeeecceeeEehHHH
Confidence 4568999999999999 33321 1222111 1112223322222211 1445789999999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCCC-CCCccccccccccccchhhhhHhhhhhc
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINK-QGKPVKVSKIILFSSIASFHGYMQIRYL 388 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
++.++.+...... .++||++++ .+.++.+++..+++..|.+..... ..++-.++......+...-++.++..+.
T Consensus 246 h~~al~k~~~~~~-~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~ 320 (343)
T KOG1371|consen 246 HVAALGKLRGAAE-FGVYNLGTG--KGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYG 320 (343)
T ss_pred HHHHhhccccchh-eeeEeecCC--CCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCCccccC
Confidence 9999986544222 569999999 779999999999999997644432 2255566666666666666666655555
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-27 Score=233.42 Aligned_cols=268 Identities=15% Similarity=0.199 Sum_probs=175.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..+|+||||||+||||++++++|+++| ++|+++.|+.... .++...+ . ...++++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~-----------------~--~~~~~~~ 62 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAKS---LHLLSKW-----------------K--EGDRLRL 62 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHhh-----------------c--cCCeEEE
Confidence 456899999999999999999999999 4567777764322 1111110 0 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-----ccHH-----HHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYD-----VAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-----~~~~-----~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
+.+|+++ .+....++.++|+|||+|+..... .++. ..++.|+.++.+++++|.+..++++||+
T Consensus 63 ~~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~ 135 (353)
T PLN02896 63 FRADLQE-------EGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVF 135 (353)
T ss_pred EECCCCC-------HHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 9999994 444556777899999999976432 1233 3345567999999999988634789999
Q ss_pred EecceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||.++||.... .-...+.+|+.+...+.. ..+..+.++|+.||+++
T Consensus 136 ~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~--------------------------------~~~~~~~~~Y~~sK~~~ 183 (353)
T PLN02896 136 TSSISTLTAKDSNGRWRAVVDETCQTPIDHV--------------------------------WNTKASGWVYVLSKLLT 183 (353)
T ss_pred EechhhccccccCCCCCCccCcccCCcHHHh--------------------------------hccCCCCccHHHHHHHH
Confidence 999999985321 000011222111000000 00112335799999999
Q ss_pred HHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc--cCCC---ccccCeeeHHHHHHH
Q 015874 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL--VGET---KVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~v~Dva~~ 311 (399)
|++++.+ ..+++++++||++|||++..+. .. ..+.. +.....|....+ .+.. ...+||||++|+|++
T Consensus 184 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~---~~--~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a 257 (353)
T PLN02896 184 EEAAFKYAKENGIDLVSVITTTVAGPFLTPS---VP--SSIQV-LLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDA 257 (353)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcccCCCcCCC---CC--chHHH-HHHHhcCCccccccccccccccCceeEEeHHHHHHH
Confidence 9999987 5689999999999999976321 11 11111 222223332211 1111 124699999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.++.... . +..|+++ + .++|+.|+++.+.+.++.
T Consensus 258 ~~~~l~~~~-~---~~~~~~~-~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 258 HIFLMEQTK-A---EGRYICC-V--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred HHHHHhCCC-c---CccEEec-C--CCCCHHHHHHHHHHhCCC
Confidence 999997422 1 3468654 4 569999999999999874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=230.09 Aligned_cols=228 Identities=22% Similarity=0.185 Sum_probs=168.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+||||++++++|+++| + |.++.|... .+.+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~~--------------------------------------~~~~ 38 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHST--------------------------------------DYCG 38 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEeccccc--------------------------------------cccC
Confidence 689999999999999999999988 4 456655321 2468
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+.+.++++ ++|+|||+|+..... .+++...+.|+.++.+++++|++. + .+|||+||.+||+
T Consensus 39 Dl~-------d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g-~~~v~~Ss~~Vy~ 109 (299)
T PRK09987 39 DFS-------NPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-G-AWVVHYSTDYVFP 109 (299)
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEccceEEC
Confidence 998 4555555555 589999999987543 355677889999999999999986 5 4799999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+ .+++|+.+ ..|.+.|+.+|..+|++++.+
T Consensus 110 ~~~~----~p~~E~~~-----------------------------------------~~P~~~Yg~sK~~~E~~~~~~-- 142 (299)
T PRK09987 110 GTGD----IPWQETDA-----------------------------------------TAPLNVYGETKLAGEKALQEH-- 142 (299)
T ss_pred CCCC----CCcCCCCC-----------------------------------------CCCCCHHHHHHHHHHHHHHHh--
Confidence 6432 23333322 244578999999999999875
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCC--CccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE--TKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
..+.+++|+++|||+... ..+..++.....+....+.++ +.+.+++.++||++.++..++... . .
T Consensus 143 ~~~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~-~-~-- 209 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKP-E-V-- 209 (299)
T ss_pred CCCEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccC-C-C--
Confidence 346799999999998641 123345555555665566665 455556667778888888776422 1 1
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
.++||++++ +++|+.|+++.+.+.++
T Consensus 210 ~giyni~~~--~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 210 AGLYHLVAS--GTTTWHDYAALVFEEAR 235 (299)
T ss_pred CCeEEeeCC--CCccHHHHHHHHHHHHH
Confidence 359999998 77999999999988654
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=230.18 Aligned_cols=240 Identities=16% Similarity=0.123 Sum_probs=170.8
Q ss_pred EEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCC
Q 015874 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (399)
Q Consensus 16 lVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~ 95 (399)
||||||||||++|+++|++.|++| .+..+. ..+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v---~~~~~~-----------------------------------------~~~Dl~ 36 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTN---LVLRTH-----------------------------------------KELDLT 36 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcE---EEeecc-----------------------------------------ccCCCC
Confidence 699999999999999999999654 333211 147888
Q ss_pred CCCCCCCchhhHHHHhc--CccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 96 SEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 96 ~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+ .+.+..+++ ++|+|||+|+..+. .......++.|+.++.+++++|++. ++++||++||.+||+..
T Consensus 37 ~-------~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 37 R-------QADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKF 108 (306)
T ss_pred C-------HHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCC
Confidence 4 444445544 58999999997542 2345667899999999999999996 78999999999999954
Q ss_pred CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hhhHhHHHHHHHHHHh--
Q 015874 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 170 ~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~~~-- 245 (399)
.+ .++|+.... .+..+.+ .|+.+|.++|++++.+
T Consensus 109 ~~~~~~E~~~~~------------------------------------------~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 109 APQPIPETALLT------------------------------------------GPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred CCCCCCHHHhcc------------------------------------------CCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 22 233332100 0112223 4999999999988776
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccC-c-chHHHHHHHhhcCccccc-cCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVED-L-KTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++++||+.|||+... +.+-... + ..+..++.+...+....+ ++++.+.++++|++|+|++++.+++....
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~- 224 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDN-FHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG- 224 (306)
T ss_pred HhCCCEEEEEecceeCCCCC-CCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc-
Confidence 56899999999999999752 1110000 0 111222233344444444 67788899999999999999999874221
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.+.||++++ .++|+.|+++.+++.++.+.
T Consensus 225 ---~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 253 (306)
T PLN02725 225 ---AEHVNVGSG--DEVTIKELAELVKEVVGFEG 253 (306)
T ss_pred ---CcceEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 357899998 77999999999999998543
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-26 Score=228.40 Aligned_cols=265 Identities=17% Similarity=0.209 Sum_probs=181.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|+|||||||||++++++|+++|+ +|.++.|...... ....+.. ....++.++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 56 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNLCNSKRSVLPVIER---------------------LGGKHPTFVE 56 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCCchHhHHHHHHH---------------------hcCCCceEEE
Confidence 6899999999999999999999995 4566665432211 1111100 0123567889
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|+++ .+.+..++. ++|+|||+|+.... .......++.|+.++.++++++++. ++++||++||+++|
T Consensus 57 ~Dl~d-------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~y 128 (338)
T PRK10675 57 GDIRN-------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVY 128 (338)
T ss_pred ccCCC-------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhh
Confidence 99994 444444444 69999999987643 2345677899999999999999986 78899999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
+.... .+++|+.+. ..+.+.|+.+|.++|++++.+
T Consensus 129 g~~~~----~~~~E~~~~----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~ 164 (338)
T PRK10675 129 GDQPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_pred CCCCC----CccccccCC----------------------------------------CCCCChhHHHHHHHHHHHHHHH
Confidence 85431 222222211 123568999999999999877
Q ss_pred -h-CCCcEEEEecCceecCCCCCCCCccc-C-cchHHHHHHHhhcCcc--cccc------CCCccccCeeeHHHHHHHHH
Q 015874 246 -K-ENLSLVIIRPTVVSGTYKEPFPGWVE-D-LKTINTLFVASAQGNL--RCLV------GETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 246 -~-~~~~~~i~Rp~~V~G~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~v~Dva~~i~ 313 (399)
. .+++++++|++.+||+.....-+... . ...+..++.++..+.. ..+. .++.+.++|+|++|+|++++
T Consensus 165 ~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~ 244 (338)
T PRK10675 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_pred HhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHH
Confidence 2 37899999999999975311111000 0 0112233444443322 1122 25678899999999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.++.......+ +++||++++ +++|+.|+++.+.+.+|.+.
T Consensus 245 ~~~~~~~~~~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 284 (338)
T PRK10675 245 AAMEKLANKPG-VHIYNLGAG--VGSSVLDVVNAFSKACGKPV 284 (338)
T ss_pred HHHHhhhccCC-CceEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 99874211111 579999998 77999999999999998643
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-27 Score=226.30 Aligned_cols=248 Identities=15% Similarity=0.163 Sum_probs=177.3
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|||||||||||+++++.|+++|+. .|.++.|..... .... .....+.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~-~~~~---------------------------~~~~~~~~d~ 50 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH-KFLN---------------------------LADLVIADYI 50 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch-hhhh---------------------------hhheeeeccC
Confidence 699999999999999999999952 456666544321 1100 0112456777
Q ss_pred CCCCCCCCchhhHHHHh----cCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 95 SSEDLGLKDSNLKEELW----NELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~----~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
.+ .+..+.+. .++|+|||+|+.... ..+....+++|+.++.+++++|.+. ++ +||++||.++|+..
T Consensus 51 ~~-------~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 51 DK-------EDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDG 121 (314)
T ss_pred cc-------hhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCC
Confidence 73 34443433 479999999997543 2456777899999999999999985 54 79999999999865
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh----
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---- 245 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~---- 245 (399)
.....|+.. +..+.+.|+.+|..+|.+++++
T Consensus 122 ~~~~~e~~~---------------------------------------------~~~p~~~Y~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 122 EAGFREGRE---------------------------------------------LERPLNVYGYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred CCCcccccC---------------------------------------------cCCCCCHHHHHHHHHHHHHHHHhHhh
Confidence 332222211 1124568999999999999864
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc------CCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV------GETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
..+++++++|++.|||+...+..+. ...+..++.+...+....+. +++++.++++|++|+|++++.++..
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~- 232 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGKM---ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN- 232 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCCc---ccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence 2357899999999999886321111 12233455555555544332 4577889999999999999999974
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
. . +++||++++ .++|+.|+++.+++.+|.++
T Consensus 233 ~--~--~~~yni~~~--~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 233 G--V--SGIFNLGTG--RARSFNDLADAVFKALGKDE 263 (314)
T ss_pred c--c--CceEEcCCC--CCccHHHHHHHHHHHhCCCC
Confidence 2 1 569999999 77999999999999998654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=229.56 Aligned_cols=265 Identities=14% Similarity=0.114 Sum_probs=179.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
...++|+||||||+||||++++++|+++| ++|.+++|+.... +.+.. + . ..+.. .....++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~~---~~l~~-l---------~-~~~~~--~~~~~~~ 109 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQEDK---EKLRE-M---------E-MFGEM--GRSNDGI 109 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-H---------h-hhccc--cccCCce
Confidence 35678999999999999999999999999 4557777764321 11110 0 0 00000 0001357
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccc---cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc-
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDE---RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA- 163 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~---~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~- 163 (399)
.++.+|+++ .+.+.++++++|+|||+|+...... ......+.|+.++.++++++++..++++|||+||.
T Consensus 110 ~~v~~Dl~d-------~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~ 182 (367)
T PLN02686 110 WTVMANLTE-------PESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLL 182 (367)
T ss_pred EEEEcCCCC-------HHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 889999994 4555577788999999999764321 22455678999999999999885468999999996
Q ss_pred -eeecCc--C---CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 164 -YVAGER--T---GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 164 -~v~~~~--~---~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
.+|+.. . ..++|..+ .+.+ .+..+.+.|+.+|.+
T Consensus 183 ~~vyg~~~~~~~~~~i~E~~~-----~~~~-----------------------------------~~~~p~~~Y~~sK~~ 222 (367)
T PLN02686 183 ACVWRQNYPHDLPPVIDEESW-----SDES-----------------------------------FCRDNKLWYALGKLK 222 (367)
T ss_pred HhcccccCCCCCCcccCCCCC-----CChh-----------------------------------hcccccchHHHHHHH
Confidence 477642 1 11333321 1100 011334679999999
Q ss_pred HHHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 238 GEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 238 ~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+|++++.+ ..+++++++||+.|||+...... . ..+.....+.. .+.+++ .++++||+|+|++++.+
T Consensus 223 ~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~---~------~~~~~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~a 290 (367)
T PLN02686 223 AEKAAWRAARGKGLKLATICPALVTGPGFFRRN---S------TATIAYLKGAQ-EMLADG--LLATADVERLAEAHVCV 290 (367)
T ss_pred HHHHHHHHHHhcCceEEEEcCCceECCCCCCCC---C------hhHHHHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHH
Confidence 99999876 56899999999999999752210 0 01223334443 334444 35799999999999999
Q ss_pred HHhc-cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 316 MVAH-AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 316 ~~~~-~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
++.. .... +++| ++++ .++++.|+++.+.+.+|.+
T Consensus 291 l~~~~~~~~--~~~y-i~~g--~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 291 YEAMGNKTA--FGRY-ICFD--HVVSREDEAEELARQIGLP 326 (367)
T ss_pred HhccCCCCC--CCcE-EEeC--CCccHHHHHHHHHHHcCCC
Confidence 9742 1112 4578 7777 6799999999999999864
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=222.91 Aligned_cols=248 Identities=20% Similarity=0.260 Sum_probs=180.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+||||+++++.|+++| +.|.++.|+....... ...+++++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------------~~~~~~~~~~ 50 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRRNL---------------------------EGLDVEIVEG 50 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCcccccc---------------------------ccCCceEEEe
Confidence 579999999999999999999999 5678888876432110 0136888999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
|++ +.+.+..+++++|+|||+|+.... ...+...++.|+.++.++++++.+. ++++||++||.++|+....
T Consensus 51 D~~-------~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 51 DLR-------DPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD 122 (328)
T ss_pred eCC-------CHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC
Confidence 999 445555777899999999986543 3456778999999999999999985 7889999999999985321
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCCC
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~ 249 (399)
+.+++|+.+.. +....+.|+.+|.++|++++.+ ..++
T Consensus 123 ---~~~~~e~~~~~--------------------------------------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~ 161 (328)
T TIGR03466 123 ---GTPADETTPSS--------------------------------------LDDMIGHYKRSKFLAEQAALEMAAEKGL 161 (328)
T ss_pred ---CCCcCccCCCC--------------------------------------cccccChHHHHHHHHHHHHHHHHHhcCC
Confidence 11222222111 1122357999999999999987 4589
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.+||++.... .....++.....+..+...+ ...+++|++|+|++++.++... . . +..|
T Consensus 162 ~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~D~a~a~~~~~~~~-~-~--~~~~ 227 (328)
T TIGR03466 162 PVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYVD---TGLNLVHVDDVAEGHLLALERG-R-I--GERY 227 (328)
T ss_pred CEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceeeC---CCcceEEHHHHHHHHHHHHhCC-C-C--CceE
Confidence 999999999999876211 11112333333333332222 3468999999999999998742 2 2 5678
Q ss_pred EecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++ + .++|+.|+++.+++.+|.+.
T Consensus 228 ~~~-~--~~~s~~e~~~~i~~~~g~~~ 251 (328)
T TIGR03466 228 ILG-G--ENLTLKQILDKLAEITGRPA 251 (328)
T ss_pred Eec-C--CCcCHHHHHHHHHHHhCCCC
Confidence 886 4 56999999999999999754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=222.72 Aligned_cols=236 Identities=19% Similarity=0.217 Sum_probs=173.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.||+||||||+||||++++++|+++|.. +.|.++.|+.... ..+.+.+ ...++.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~~---~~~~~~~--------------------~~~~~~~ 57 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQ---WEMQQKF--------------------PAPCLRF 57 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhHH---HHHHHHh--------------------CCCcEEE
Confidence 46899999999999999999999998622 4567777764321 1111100 0146889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+.+|++ +.+.+...++++|+|||+||.... ..++...+++|+.++.++++++.+. ++++||++||...+
T Consensus 58 v~~Dl~-------d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 58 FIGDVR-------DKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA 129 (324)
T ss_pred EEccCC-------CHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC
Confidence 999999 455555777889999999997542 2345678999999999999999986 78899999986321
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
.+.++|+.+|+++|++++.+
T Consensus 130 -----------------------------------------------------------~p~~~Y~~sK~~~E~l~~~~~ 150 (324)
T TIGR03589 130 -----------------------------------------------------------NPINLYGATKLASDKLFVAAN 150 (324)
T ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 12367999999999998763
Q ss_pred ----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 246 ----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 246 ----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
..+++++++||++|||+... .+..+......+..+....++.+.++|+|++|+|++++.+++...
T Consensus 151 ~~~~~~gi~~~~lR~g~v~G~~~~----------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~- 219 (324)
T TIGR03589 151 NISGSKGTRFSVVRYGNVVGSRGS----------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERML- 219 (324)
T ss_pred hhccccCcEEEEEeecceeCCCCC----------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCC-
Confidence 46899999999999997641 222333344444312222456778999999999999999997421
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
. +++|+ +++ ..+++.|+++.+.+...
T Consensus 220 -~--~~~~~-~~~--~~~sv~el~~~i~~~~~ 245 (324)
T TIGR03589 220 -G--GEIFV-PKI--PSMKITDLAEAMAPECP 245 (324)
T ss_pred -C--CCEEc-cCC--CcEEHHHHHHHHHhhCC
Confidence 1 46784 555 55899999999998754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=217.48 Aligned_cols=261 Identities=11% Similarity=0.054 Sum_probs=175.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++++|+|||||||||++++++|+++| ++|++++|+.........+. .+ . ....+++++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~-~l-----------------~-~~~~~~~~~ 62 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIR-GL-----------------S-CEEERLKVF 62 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHH-hc-----------------c-cCCCceEEE
Confidence 35799999999999999999999999 55688888643221111111 00 0 012468889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
.+|+++ .+.+...+.++|.|+|.++.... ....+..+++|+.++.++++++.+..++++||++||.+++...
T Consensus 63 ~~Dl~d-------~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~ 135 (297)
T PLN02583 63 DVDPLD-------YHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR 135 (297)
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence 999994 44455778899999998765432 2345678999999999999999885357899999998765421
Q ss_pred -CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 170 -TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 170 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
........++|+.+.++... ......|+.||.++|++++.+ .
T Consensus 136 ~~~~~~~~~~~E~~~~~~~~~-----------------------------------~~~~~~Y~~sK~~aE~~~~~~~~~ 180 (297)
T PLN02583 136 DDNISTQKDVDERSWSDQNFC-----------------------------------RKFKLWHALAKTLSEKTAWALAMD 180 (297)
T ss_pred cccCCCCCCCCcccCCCHHHH-----------------------------------hhcccHHHHHHHHHHHHHHHHHHH
Confidence 11111223333332221100 011236999999999999876 4
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.|||+...+.. . ...+.... ..+ ..+.+|||+|+|++++.+++. +.. +
T Consensus 181 ~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~~-~~~--~~~~~v~V~Dva~a~~~al~~-~~~---~ 239 (297)
T PLN02583 181 RGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQM-YEN--GVLVTVDVNFLVDAHIRAFED-VSS---Y 239 (297)
T ss_pred hCCcEEEEcCCcccCCCCCCch----------h----hhcCCccc-Ccc--cCcceEEHHHHHHHHHHHhcC-ccc---C
Confidence 6899999999999998763210 0 11122111 122 346799999999999999973 222 3
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+.|+++++ ....+.++++++.+.+...+..
T Consensus 240 ~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 240 GRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred CcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 46989886 4345688999999998766554
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=224.75 Aligned_cols=227 Identities=14% Similarity=0.097 Sum_probs=169.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||+++++.|+++| ++|.+++|+..... ... ..+++++.+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~~---~l~------------------------~~~v~~v~~ 50 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKAS---FLK------------------------EWGAELVYG 50 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHhh---hHh------------------------hcCCEEEEC
Confidence 689999999999999999999999 56799999753221 111 146889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|++ +.+.+...++++|+|||+++.. ..+.....+.|+.++.+++++|++. ++++|||+||.++...
T Consensus 51 Dl~-------d~~~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~---- 116 (317)
T CHL00194 51 DLS-------LPETLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQY---- 116 (317)
T ss_pred CCC-------CHHHHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccccc----
Confidence 999 4555557788999999987642 2233456778999999999999996 8999999998643211
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~ 252 (399)
+..+|..+|..+|..++. .+++++
T Consensus 117 ------------------------------------------------------~~~~~~~~K~~~e~~l~~--~~l~~t 140 (317)
T CHL00194 117 ------------------------------------------------------PYIPLMKLKSDIEQKLKK--SGIPYT 140 (317)
T ss_pred ------------------------------------------------------CCChHHHHHHHHHHHHHH--cCCCeE
Confidence 124588999999999876 689999
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
++||+.+|+... . .+......+....+ .++.+.+++||++|+|+++..++..... . +++||++
T Consensus 141 ilRp~~~~~~~~-------~------~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~--~~~~ni~ 203 (317)
T CHL00194 141 IFRLAGFFQGLI-------S------QYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPET-K--NKTFPLV 203 (317)
T ss_pred EEeecHHhhhhh-------h------hhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccc-c--CcEEEec
Confidence 999998875321 0 11111222232233 4445678999999999999999863222 2 6899999
Q ss_pred CCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 333 SSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
++ +++|+.|+++.+++..|++...
T Consensus 204 g~--~~~s~~el~~~~~~~~g~~~~~ 227 (317)
T CHL00194 204 GP--KSWNSSEIISLCEQLSGQKAKI 227 (317)
T ss_pred CC--CccCHHHHHHHHHHHhCCCCeE
Confidence 98 7799999999999999976433
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-25 Score=215.56 Aligned_cols=227 Identities=20% Similarity=0.255 Sum_probs=168.5
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|||||||||||+++++.|+++|+ +|++++|. .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~---~v~~~~r~------------------------------------------~~d 35 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR---VVVALTSS------------------------------------------QLD 35 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEeCCc------------------------------------------ccC
Confidence 489999999999999999999994 55777663 256
Q ss_pred CCCCCCCCCchhhHHHHhcC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 94 ISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+. +.+.+...+++ +|+|||+|+..... ......+++|+.++.++++++++. + .+||++||.++|+.
T Consensus 36 ~~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 36 LT-------DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-G-ARLVHISTDYVFDG 106 (287)
T ss_pred CC-------CHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEeeeeeecC
Confidence 66 34444455554 69999999976432 345677899999999999999885 4 38999999999985
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCC
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~ 248 (399)
... .+++|+.+ ..+.+.|+.+|..+|++++.+ +
T Consensus 107 ~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~~K~~~E~~~~~~--~ 139 (287)
T TIGR01214 107 EGK----RPYREDDA-----------------------------------------TNPLNVYGQSKLAGEQAIRAA--G 139 (287)
T ss_pred CCC----CCCCCCCC-----------------------------------------CCCcchhhHHHHHHHHHHHHh--C
Confidence 421 22222221 133467999999999999885 6
Q ss_pred CcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcE
Q 015874 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 249 ~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
.+++++||+.|||+.... .....++.....+....+.+ ...++++|++|+|+++..++...... +++
T Consensus 140 ~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~---~~~ 206 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGGR--------NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARA---RGV 206 (287)
T ss_pred CCeEEEEeeecccCCCCC--------CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCC---CCe
Confidence 799999999999987510 12233444444443333333 35789999999999999999743111 579
Q ss_pred EEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 329 yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
||++++ +++|+.|+++.+++.+|...
T Consensus 207 ~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 207 YHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred EEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 999998 77999999999999999764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-25 Score=220.24 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=202.1
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+.+.+.||+|+||||+|.||+.+|+++++.++ .++..+.|++.+....++ + +...++ .
T Consensus 243 ~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~---e---------l~~~~~-------~ 301 (588)
T COG1086 243 LIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDM---E---------LREKFP-------E 301 (588)
T ss_pred HHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHH---H---------HHhhCC-------C
Confidence 356889999999999999999999999999876 679999998865422222 1 112222 3
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.++.++.||+. |.+..+.++.+ +|+|+|.||.-+. ..++.+++.+|+.||.|++++|.++ ++++||.
T Consensus 302 ~~~~~~igdVr-------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~ 373 (588)
T COG1086 302 LKLRFYIGDVR-------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVL 373 (588)
T ss_pred cceEEEecccc-------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEE
Confidence 68899999999 77888788887 9999999998765 4789999999999999999999997 9999999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||..+. .|.|.||.||.++|
T Consensus 374 iSTDKAV-----------------------------------------------------------~PtNvmGaTKr~aE 394 (588)
T COG1086 374 ISTDKAV-----------------------------------------------------------NPTNVMGATKRLAE 394 (588)
T ss_pred EecCccc-----------------------------------------------------------CCchHhhHHHHHHH
Confidence 9987532 44688999999999
Q ss_pred HHHHHhhC-----CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQSKE-----NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~~~-----~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
++++.+.. +.+.+++|+|+|.|+.. +.+.-|..++.+|.+..+ .+++-+|=|+.+.|.++.++.
T Consensus 395 ~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----------SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlq 463 (588)
T COG1086 395 KLFQAANRNVSGTGTRFCVVRFGNVLGSRG----------SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQ 463 (588)
T ss_pred HHHHHHhhccCCCCcEEEEEEecceecCCC----------CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHH
Confidence 99998822 48899999999999876 333345667788866554 777889999999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.....+ |.+|-+.-| .|+++.|+++.|.+.+|..|
T Consensus 464 A~a~~~g----GeifvldMG--epvkI~dLAk~mi~l~g~~~ 499 (588)
T COG1086 464 AGAIAKG----GEIFVLDMG--EPVKIIDLAKAMIELAGQTP 499 (588)
T ss_pred HHhhcCC----CcEEEEcCC--CCeEHHHHHHHHHHHhCCCC
Confidence 8873222 789999988 78999999999999998433
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=211.33 Aligned_cols=261 Identities=19% Similarity=0.258 Sum_probs=178.3
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+||||||||+||+++++.|+++|++ |.++.|...... .+... + .. ..+++++.+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~---V~~~~~~~~~~~--~~~~~-~-----------------~~--~~~~~~~~~D 55 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE---VVVLDNLSNGSP--EALKR-G-----------------ER--ITRVTFVEGD 55 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe---EEEEeCCCccch--hhhhh-h-----------------cc--ccceEEEECC
Confidence 5899999999999999999999954 465544322211 11000 0 00 0157788999
Q ss_pred CCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+++ .+....++. ++|+|||+|+..... ......++.|+.++.++++++.+. ++++||++||.++|+.
T Consensus 56 ~~~-------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 56 LRD-------RELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred CCC-------HHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCC
Confidence 995 444445443 699999999976432 345567889999999999999886 6789999999999985
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
... .++|+ .+ ..+.+.|+.+|..+|++++.+
T Consensus 128 ~~~~~~~e~-----~~-----------------------------------------~~~~~~y~~sK~~~e~~~~~~~~ 161 (328)
T TIGR01179 128 PSSIPISED-----SP-----------------------------------------LGPINPYGRSKLMSERILRDLSK 161 (328)
T ss_pred CCCCCcccc-----CC-----------------------------------------CCCCCchHHHHHHHHHHHHHHHH
Confidence 432 22222 11 134567999999999999877
Q ss_pred h-CCCcEEEEecCceecCCCCCCCCcc-cCc-chHHHHHHHhh-cCccccc------cCCCccccCeeeHHHHHHHHHHH
Q 015874 246 K-ENLSLVIIRPTVVSGTYKEPFPGWV-EDL-KTINTLFVASA-QGNLRCL------VGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 246 ~-~~~~~~i~Rp~~V~G~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
. .+++++++||+.|||+......++. ... ..+..++.... ......+ ..++.+.++|+|++|+|+++..+
T Consensus 162 ~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~ 241 (328)
T TIGR01179 162 ADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAA 241 (328)
T ss_pred hccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHH
Confidence 3 6899999999999998653221111 111 12222222222 1111111 13456778999999999999999
Q ss_pred HHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+....... .+++||++++ .++|+.|+++.+++.+|.+.
T Consensus 242 ~~~~~~~~-~~~~~n~~~~--~~~s~~ei~~~~~~~~g~~~ 279 (328)
T TIGR01179 242 LEYLLNGG-ESHVYNLGYG--QGFSVLEVIEAFKKVSGVDF 279 (328)
T ss_pred HhhhhcCC-CcceEEcCCC--CcccHHHHHHHHHHHhCCCc
Confidence 87422211 2579999998 77999999999999998754
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=218.09 Aligned_cols=235 Identities=16% Similarity=0.186 Sum_probs=174.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH---HHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA---ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+|+|+|||||||||++++++|+++| +.|++++|+...... ...... ...+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~----------------------~~~~ 112 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKEDTKK----------------------ELPG 112 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhhHHhh----------------------hcCC
Confidence 567899999999999999999999999 566899998643211 010000 0247
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc----CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~----~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
++++.+|+++ .+.+..+++ ++|+|||+++.... .....+++|+.++.++++++++. ++++||++||
T Consensus 113 v~~v~~Dl~d-------~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS 182 (390)
T PLN02657 113 AEVVFGDVTD-------ADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSA 182 (390)
T ss_pred ceEEEeeCCC-------HHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEee
Confidence 8899999995 444445554 69999999885321 11234678999999999999986 7899999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++++. ...|..+|...|+.+
T Consensus 183 ~~v~~p-----------------------------------------------------------~~~~~~sK~~~E~~l 203 (390)
T PLN02657 183 ICVQKP-----------------------------------------------------------LLEFQRAKLKFEAEL 203 (390)
T ss_pred ccccCc-----------------------------------------------------------chHHHHHHHHHHHHH
Confidence 977542 135888999999988
Q ss_pred HHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcccc-CeeeHHHHHHHHHHHHHhccC
Q 015874 243 QQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 243 ~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~i~~~~~~~~~ 321 (399)
.....+++++++||+.+||... .++.....|.+..+.++++..+ ++||++|+|+++..++....
T Consensus 204 ~~~~~gl~~tIlRp~~~~~~~~--------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~- 268 (390)
T PLN02657 204 QALDSDFTYSIVRPTAFFKSLG--------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES- 268 (390)
T ss_pred HhccCCCCEEEEccHHHhcccH--------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-
Confidence 7644689999999999997422 1233444556555667776544 68999999999999886322
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.. +++||++++. ..+|+.|+++++++.+|+++
T Consensus 269 ~~--~~~~~Iggp~-~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 269 KI--NKVLPIGGPG-KALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred cc--CCEEEcCCCC-cccCHHHHHHHHHHHhCCCC
Confidence 22 5799998851 36999999999999999754
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=248.15 Aligned_cols=282 Identities=22% Similarity=0.337 Sum_probs=197.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.++|+|||||||||++++++|++++ ..+.+|+|++|........+++.+.+... +. +......+++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~----------~~-~~~~~~~~i~~~ 1039 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTY----------GI-WDEEWASRIEVV 1039 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHh----------CC-CchhhhcceEEE
Confidence 5899999999999999999999877 23468999999876655555554432111 11 112223579999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|++++.+|+....+ ..+..++|+|||+|+.+++...+......|+.|+.++++++.+. ++++|+|+||.++|+...
T Consensus 1040 ~gDl~~~~lgl~~~~~-~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443 1040 LGDLSKEKFGLSDEKW-SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred eccCCCccCCcCHHHH-HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCccc
Confidence 9999999999966554 36778899999999999887777777778999999999999986 788999999999997421
Q ss_pred C-cccc-------ccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 171 G-LILE-------NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 171 ~-~~~e-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
. ...+ ..+++..+.. .....+.++|+.||+.+|+++
T Consensus 1118 ~~~~~~~~~~~~~~~~~e~~~~~------------------------------------~~~~~~~~~Y~~sK~~aE~l~ 1161 (1389)
T TIGR03443 1118 YVNLSDELVQAGGAGIPESDDLM------------------------------------GSSKGLGTGYGQSKWVAEYII 1161 (1389)
T ss_pred ccchhhhhhhccCCCCCcccccc------------------------------------cccccCCCChHHHHHHHHHHH
Confidence 0 0000 0011110000 011234578999999999999
Q ss_pred HHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 243 QQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 243 ~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
..+ ..|++++++||+.|||+.... .......+..++..... ...+ .+....+++++|||+|++++.++.....
T Consensus 1162 ~~~~~~g~~~~i~Rpg~v~G~~~~g---~~~~~~~~~~~~~~~~~--~~~~-p~~~~~~~~~~Vddva~ai~~~~~~~~~ 1235 (1389)
T TIGR03443 1162 REAGKRGLRGCIVRPGYVTGDSKTG---ATNTDDFLLRMLKGCIQ--LGLI-PNINNTVNMVPVDHVARVVVAAALNPPK 1235 (1389)
T ss_pred HHHHhCCCCEEEECCCccccCCCcC---CCCchhHHHHHHHHHHH--hCCc-CCCCCccccccHHHHHHHHHHHHhCCcc
Confidence 887 568999999999999987522 11111222223322211 1122 2344579999999999999998863321
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHh
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~ 351 (399)
...+.+||++++ ..+++.++++.+.+.
T Consensus 1236 -~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1236 -ESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred -cCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 112568999988 679999999999764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=209.94 Aligned_cols=262 Identities=19% Similarity=0.268 Sum_probs=193.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++.+++||||+||+|.||+.+|++++.. .+|.++........-... .. .....+++++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e----------------~~-----~~~~~~v~~~ 60 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAE----------------LT-----GFRSGRVTVI 60 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-cEEEEeccCccccccchh----------------hh-----cccCCceeEE
Confidence 4578999999999999999999999853 455555444321100000 00 0024789999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccC--cc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--FD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~--~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
++|+. +...+...++++ .|+|+|+... +. .+.+.+.++|+.||.+++++|.+. +++++||+||.+|..
T Consensus 61 ~~D~~-------~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 61 LGDLL-------DANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVF 131 (361)
T ss_pred ecchh-------hhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEe
Confidence 99999 455555778888 8888887653 33 357888999999999999999997 999999999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh-
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK- 246 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~- 246 (399)
.... .-..+|+.|. +..+.+.|+.||..+|+++++++
T Consensus 132 ~g~~---~~n~~E~~p~---------------------------------------p~~~~d~Y~~sKa~aE~~Vl~an~ 169 (361)
T KOG1430|consen 132 GGEP---IINGDESLPY---------------------------------------PLKHIDPYGESKALAEKLVLEANG 169 (361)
T ss_pred CCee---cccCCCCCCC---------------------------------------ccccccccchHHHHHHHHHHHhcC
Confidence 6542 1111222211 12455789999999999999983
Q ss_pred -CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc-CCC-
Q 015874 247 -ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA-KQP- 323 (399)
Q Consensus 247 -~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~-~~~- 323 (399)
.++.++.+||+.|||+++. ..+...+..+..|......++++..-|+++++.||.+++.+..+-. ..+
T Consensus 170 ~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~ 240 (361)
T KOG1430|consen 170 SDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS 240 (361)
T ss_pred CCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence 5689999999999999982 2222445555667777777888899999999999999998776422 111
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
-.|++|+|.++ +++...+++..+.+.+|...
T Consensus 241 ~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~ 271 (361)
T KOG1430|consen 241 VNGQFYFITDD--TPVRFFDFLSPLVKALGYCL 271 (361)
T ss_pred cCceEEEEeCC--CcchhhHHHHHHHHhcCCCC
Confidence 13899999999 78888888889999998654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=209.91 Aligned_cols=230 Identities=20% Similarity=0.249 Sum_probs=158.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+|+||++|++.|.++| +.|....|. ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------------------------------~~ 35 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------------------------------DL 35 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------------------------------CS
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------------------------------hc
Confidence 799999999999999999999888 445665332 45
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+.+..++. ++|+|||+||..+. ..+++....+|+.++.+|.++|... ..++||+||..||+
T Consensus 36 dl~-------d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~STd~VFd 106 (286)
T PF04321_consen 36 DLT-------DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER--GARLIHISTDYVFD 106 (286)
T ss_dssp -TT-------SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEEEGGGS-
T ss_pred CCC-------CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEeeccEEEc
Confidence 666 4444445544 68999999998764 3578889999999999999999984 45899999999997
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+ .+++|+++ ..|.+.||++|+.+|+.+++.
T Consensus 107 G~~~----~~y~E~d~-----------------------------------------~~P~~~YG~~K~~~E~~v~~~-- 139 (286)
T PF04321_consen 107 GDKG----GPYTEDDP-----------------------------------------PNPLNVYGRSKLEGEQAVRAA-- 139 (286)
T ss_dssp SSTS----SSB-TTS---------------------------------------------SSHHHHHHHHHHHHHHHH--
T ss_pred CCcc----cccccCCC-----------------------------------------CCCCCHHHHHHHHHHHHHHHh--
Confidence 5532 22333221 245688999999999999984
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
.-...|+|++.+||+.. . +.+..++....+++...+.. +..+..++++|+|++++.++++........+
T Consensus 140 ~~~~~IlR~~~~~g~~~---~------~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~G 208 (286)
T PF04321_consen 140 CPNALILRTSWVYGPSG---R------NFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWG 208 (286)
T ss_dssp -SSEEEEEE-SEESSSS---S------SHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-E
T ss_pred cCCEEEEecceecccCC---C------chhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccce
Confidence 23889999999999843 1 33345556666666655555 4688999999999999999986543222257
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+||++++ +.+|+.|+++.+++.+|...
T Consensus 209 iyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 209 IYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp EEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred eEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 9999999 77999999999999999765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=208.85 Aligned_cols=241 Identities=21% Similarity=0.285 Sum_probs=171.2
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
||||||+|.||+.|+++|++.++ .+++++.|++.....+++ ++ .+..+. +.....+.++.||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~---~l---------~~~~~~---~~v~~~~~~vigDv 63 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELER---EL---------RSRFPD---PKVRFEIVPVIGDV 63 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHH---HC---------HHHC-----TTCEEEEE--CTSC
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHH---HH---------hhcccc---cCcccccCceeecc
Confidence 79999999999999999999876 678999888755432222 11 000000 00111234568999
Q ss_pred CCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 95 SSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
. +.+.+..+++ ++|+|||.||.-+. ..++.+++++|+.|+.|++++|.++ ++++||++||..+.
T Consensus 64 r-------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv--- 132 (293)
T PF02719_consen 64 R-------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAV--- 132 (293)
T ss_dssp C-------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCS---
T ss_pred c-------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccC---
Confidence 9 7888878888 89999999998654 4688999999999999999999997 89999999988543
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh---
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK--- 246 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~--- 246 (399)
.|.+.||.||..+|+++..++
T Consensus 133 --------------------------------------------------------~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 133 --------------------------------------------------------NPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp --------------------------------------------------------S--SHHHHHHHHHHHHHHHHCCTS
T ss_pred --------------------------------------------------------CCCcHHHHHHHHHHHHHHHHhhhC
Confidence 345789999999999999882
Q ss_pred --CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 247 --ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 247 --~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
.+.+++++|+|+|.|+.. +.+..|..++..|.+..+ .+++..|=|+.+++.++.++.+.....+
T Consensus 157 ~~~~t~f~~VRFGNVlgS~G----------SVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~~--- 222 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGSRG----------SVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAKG--- 222 (293)
T ss_dssp SSS--EEEEEEE-EETTGTT----------SCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--T---
T ss_pred CCCCcEEEEEEecceecCCC----------cHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCCC---
Confidence 257899999999999776 344566778888766555 6667889999999999999998874332
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++|-+--+ .++++.|+++.+.+.+|..+
T Consensus 223 -geifvl~mg--~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 223 -GEIFVLDMG--EPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp -TEEEEE-----TCEECCCHHHHHHHHTT-EE
T ss_pred -CcEEEecCC--CCcCHHHHHHHHHhhccccc
Confidence 689999888 77999999999999998644
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=215.32 Aligned_cols=242 Identities=16% Similarity=0.178 Sum_probs=170.9
Q ss_pred cCCcEEEEe----cCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 10 LENKTILVS----GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 10 ~~~~~IlVT----GatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
...|+|||| |||||||++|++.|+++| ++|++++|+......... ..+... ......
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~~~~~~--------~~~~~~--------~~l~~~ 110 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPSQKMKK--------EPFSRF--------SELSSA 110 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcchhhhcc--------Cchhhh--------hHhhhc
Confidence 345789999 999999999999999999 567999998653211100 000000 000013
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
+++++.+|+.+ .+.. ....++|+|||+++. +..++.++++++++. ++++|||+||.++
T Consensus 111 ~v~~v~~D~~d-------~~~~-~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~v 168 (378)
T PLN00016 111 GVKTVWGDPAD-------VKSK-VAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGV 168 (378)
T ss_pred CceEEEecHHH-------HHhh-hccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhh
Confidence 58899999883 1111 112479999999763 234678899999986 8999999999999
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
|+.... .+..|+.+ ..++. +|..+|.+++.
T Consensus 169 yg~~~~----~p~~E~~~--------------------------------------------~~p~~-sK~~~E~~l~~- 198 (378)
T PLN00016 169 YKKSDE----PPHVEGDA--------------------------------------------VKPKA-GHLEVEAYLQK- 198 (378)
T ss_pred cCCCCC----CCCCCCCc--------------------------------------------CCCcc-hHHHHHHHHHH-
Confidence 986432 11221111 11122 89999998876
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
.+++++++||+.+||+.... .....++.++..+....+++++.+.++++|++|+|++++.++.... ..
T Consensus 199 -~~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~-- 266 (378)
T PLN00016 199 -LGVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK-AA-- 266 (378)
T ss_pred -cCCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc-cc--
Confidence 58999999999999987521 1122344556666655666778889999999999999999997422 22
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ ..+|+.|+++.+.+.+|.+.
T Consensus 267 ~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 267 GQIFNIVSD--RAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred CCEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 579999998 67999999999999999754
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=200.19 Aligned_cols=233 Identities=15% Similarity=0.142 Sum_probs=159.3
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|||||||||||+++++.|+++| ++|++++|+........ ... ..|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~---------------------------~~~----~~~~ 46 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANTK---------------------------WEG----YKPW 46 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCccc---------------------------cee----eecc
Confidence 6999999999999999999999 56799999875431100 000 1122
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCcc-----ccHHHHHHHhHHHHHHHHHHHHhccCC--ceEEEEecceeec
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKCVKL--KVFVHVSTAYVAG 167 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-----~~~~~~~~~n~~~~~~ll~~a~~~~~~--~~~v~~SS~~v~~ 167 (399)
. . ......+.++|+|||+|+..... ...+.++++|+.++.++++++++. ++ .+|++.||.++|+
T Consensus 47 ~-------~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 47 A-------P-LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYG 117 (292)
T ss_pred c-------c-cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeC
Confidence 1 1 11124456899999999975421 234567889999999999999986 44 4677788888998
Q ss_pred CcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
...+ .++|+ .+. .+.+.|+..+...|..+..+
T Consensus 118 ~~~~~~~~E~-----~~~-----------------------------------------~~~~~~~~~~~~~e~~~~~~~ 151 (292)
T TIGR01777 118 TSEDRVFTEE-----DSP-----------------------------------------AGDDFLAELCRDWEEAAQAAE 151 (292)
T ss_pred CCCCCCcCcc-----cCC-----------------------------------------CCCChHHHHHHHHHHHhhhch
Confidence 6432 22222 110 11223555566667666544
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHH--HhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV--ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
+.+++++++||+.|||+... +. ..+.. ....+ ...++++..++++|++|+|+++..++.... .
T Consensus 152 ~~~~~~~ilR~~~v~G~~~~----~~------~~~~~~~~~~~~---~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~-~- 216 (292)
T TIGR01777 152 DLGTRVVLLRTGIVLGPKGG----AL------AKMLPPFRLGLG---GPLGSGRQWFSWIHIEDLVQLILFALENAS-I- 216 (292)
T ss_pred hcCCceEEEeeeeEECCCcc----hh------HHHHHHHhcCcc---cccCCCCcccccEeHHHHHHHHHHHhcCcc-c-
Confidence 45899999999999998641 11 11111 11111 124667889999999999999999996322 2
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.++||++++ .++|+.|+++.+++.+|.+
T Consensus 217 --~g~~~~~~~--~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 217 --SGPVNATAP--EPVRNKEFAKALARALHRP 244 (292)
T ss_pred --CCceEecCC--CccCHHHHHHHHHHHhCCC
Confidence 458999998 7799999999999999864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-23 Score=200.42 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=151.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|+||||||+||||++|++.|+++|++| ....
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V---~~~~--------------------------------------------- 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDF---HYGS--------------------------------------------- 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEE---EEec---------------------------------------------
Confidence 3799999999999999999999999654 3221
Q ss_pred ccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 92 GDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
+|+. +.+.+...+ .++|+|||+||..+. ..++..++++|+.++.+++++|++. +++ ++++||.
T Consensus 41 ~~~~-------~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~ 111 (298)
T PLN02778 41 GRLE-------NRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATG 111 (298)
T ss_pred CccC-------CHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecc
Confidence 1222 111111222 268999999998642 2456778999999999999999986 665 6677888
Q ss_pred eeecCcCC-ccc-cccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 164 YVAGERTG-LIL-ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 164 ~v~~~~~~-~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
++|+.... ... ...++|++ .+..+.+.|+.+|.++|.+
T Consensus 112 ~vy~~~~~~p~~~~~~~~Ee~----------------------------------------~p~~~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 112 CIFEYDDAHPLGSGIGFKEED----------------------------------------TPNFTGSFYSKTKAMVEEL 151 (298)
T ss_pred eEeCCCCCCCcccCCCCCcCC----------------------------------------CCCCCCCchHHHHHHHHHH
Confidence 88875321 000 01122211 1112347899999999999
Q ss_pred HHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 242 MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 242 l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
+..+. +..++|++.++|.... . ...++..+..+...... ..+++|++|++++++.++...
T Consensus 152 ~~~y~---~~~~lr~~~~~~~~~~----~------~~~fi~~~~~~~~~~~~-----~~s~~yv~D~v~al~~~l~~~-- 211 (298)
T PLN02778 152 LKNYE---NVCTLRVRMPISSDLS----N------PRNFITKITRYEKVVNI-----PNSMTILDELLPISIEMAKRN-- 211 (298)
T ss_pred HHHhh---ccEEeeecccCCcccc----c------HHHHHHHHHcCCCeeEc-----CCCCEEHHHHHHHHHHHHhCC--
Confidence 98762 4678898777775421 0 11234455554332221 137999999999999998632
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
. .++||++++ .++|+.|+++.+++.++..
T Consensus 212 ~---~g~yNigs~--~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 212 L---TGIYNFTNP--GVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred C---CCeEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 1 359999998 7799999999999999853
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=192.75 Aligned_cols=237 Identities=16% Similarity=0.170 Sum_probs=165.0
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|||||||||++|+..|.+.| +.|++++|+..+..... +..+....+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~~---------------------------~~~v~~~~~-- 48 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQNL---------------------------HPNVTLWEG-- 48 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhhc---------------------------Cccccccch--
Confidence 6899999999999999999999 56699999986542210 111111111
Q ss_pred CCCCCCCCchhhHHHHhc-CccEEEEcccccCc----c-ccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeec
Q 015874 95 SSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF----D-ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAG 167 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-~~D~Vih~Aa~~~~----~-~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~ 167 (399)
.. .... ++|+|||+||..-+ . +.-+...+..+..|..|++++.++ .+++.+|.-|.++.||
T Consensus 49 --------~~----~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 49 --------LA----DALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred --------hh----hcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 11 1122 79999999998633 2 334556788899999999999865 4678899999999999
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-h
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~ 246 (399)
+.. +..++|+.+...+....++. .=|...+.+ .
T Consensus 117 ~~~----~~~~tE~~~~g~~Fla~lc~------------------------------------------~WE~~a~~a~~ 150 (297)
T COG1090 117 HSG----DRVVTEESPPGDDFLAQLCQ------------------------------------------DWEEEALQAQQ 150 (297)
T ss_pred CCC----ceeeecCCCCCCChHHHHHH------------------------------------------HHHHHHhhhhh
Confidence 874 44455544433333333331 113333333 4
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.|.+++.+|.|+|.++..+..+.+... + +...| .-.|+|+++++|||++|++++|..+++. ..- .
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~~~-------f-k~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~-~~l---s 215 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKMLPL-------F-KLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLEN-EQL---S 215 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhcch-------h-hhccC---CccCCCCceeeeeeHHHHHHHHHHHHhC-cCC---C
Confidence 589999999999999776433222211 1 11111 2248899999999999999999999984 332 3
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+.||++++ +|++..++...+.+.++++.+.
T Consensus 216 Gp~N~taP--~PV~~~~F~~al~r~l~RP~~~ 245 (297)
T COG1090 216 GPFNLTAP--NPVRNKEFAHALGRALHRPAIL 245 (297)
T ss_pred CcccccCC--CcCcHHHHHHHHHHHhCCCccc
Confidence 57999999 9999999999999999876655
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=191.73 Aligned_cols=225 Identities=21% Similarity=0.268 Sum_probs=171.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||++|.+|++|+++|. .+ ..|.++.|. ..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~------------------------------------------~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE---FEVIATDRA------------------------------------------EL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC---ceEEeccCc------------------------------------------cc
Confidence 459999999999999999987 34 445666443 26
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+...+++. ++|+|||+|+++..+ ..++.++.+|..+..++.++|.+. --++||+||.+|+.
T Consensus 35 Dit-------d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFD 105 (281)
T COG1091 35 DIT-------DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFD 105 (281)
T ss_pred ccc-------ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEec
Confidence 888 4555556665 689999999998754 457888999999999999999985 45799999999997
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+ .+|.|+++ ..|-+.||.||+++|..++++
T Consensus 106 G~~~----~~Y~E~D~-----------------------------------------~~P~nvYG~sKl~GE~~v~~~-- 138 (281)
T COG1091 106 GEKG----GPYKETDT-----------------------------------------PNPLNVYGRSKLAGEEAVRAA-- 138 (281)
T ss_pred CCCC----CCCCCCCC-----------------------------------------CCChhhhhHHHHHHHHHHHHh--
Confidence 6542 23333321 255678999999999999984
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
+-+..|+|.+.|||...+ +....++.....|....+.. ++....+++.|+|+++..++..... ++
T Consensus 139 ~~~~~I~Rtswv~g~~g~---------nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~----~~ 203 (281)
T COG1091 139 GPRHLILRTSWVYGEYGN---------NFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE----GG 203 (281)
T ss_pred CCCEEEEEeeeeecCCCC---------CHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc----Cc
Confidence 567899999999997752 22223444444444444433 4788899999999999999874332 35
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+||+++. ...||.|+++.+.+.++...
T Consensus 204 ~yH~~~~--g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 204 VYHLVNS--GECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred EEEEeCC--CcccHHHHHHHHHHHhCCCc
Confidence 9999998 66999999999999998544
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=207.76 Aligned_cols=202 Identities=14% Similarity=0.135 Sum_probs=153.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||++++++|+++| +.|.+++|+.... ...++.++.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~------------------------------~~~~v~~v~g 47 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS------------------------------WPSSADFIAA 47 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh------------------------------cccCceEEEe
Confidence 589999999999999999999999 4568888764211 0135788999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|++ +.+.+..+++++|+|||+|+.... ..++|+.++.++++++++. ++++||++||..
T Consensus 48 DL~-------D~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------- 105 (854)
T PRK05865 48 DIR-------DATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------- 105 (854)
T ss_pred eCC-------CHHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------
Confidence 999 455555777889999999986432 4688999999999999986 788999999641
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~ 252 (399)
|..+|+++.+ .+++++
T Consensus 106 --------------------------------------------------------------K~aaE~ll~~--~gl~~v 121 (854)
T PRK05865 106 --------------------------------------------------------------QPRVEQMLAD--CGLEWV 121 (854)
T ss_pred --------------------------------------------------------------HHHHHHHHHH--cCCCEE
Confidence 6778888865 589999
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
++||++|||+.. . .++..... ......+++...++|+|++|+|++++.++..... . +++||++
T Consensus 122 ILRp~~VYGP~~---~----------~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~-~--ggvyNIg 184 (854)
T PRK05865 122 AVRCALIFGRNV---D----------NWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI-D--SGPVNLA 184 (854)
T ss_pred EEEeceEeCCCh---H----------HHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc-C--CCeEEEE
Confidence 999999999763 1 11222221 1112224455677999999999999999863221 1 4689999
Q ss_pred CCCCCcccHHHHHHHHHHhh
Q 015874 333 SSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~~ 352 (399)
++ +++|+.|+++.+.+..
T Consensus 185 sg--~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 185 AP--GELTFRRIAAALGRPM 202 (854)
T ss_pred CC--CcccHHHHHHHHhhhh
Confidence 98 7799999999988753
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-20 Score=175.52 Aligned_cols=242 Identities=15% Similarity=0.096 Sum_probs=156.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+|+||++++++|+++| ++|.++.|+... .+.+.+. ...++.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~~~---~~~~~~~---------------------~~~~~~~~~~ 55 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG---DRVAATVRRPDA---LDDLKAR---------------------YGDRLWVLQL 55 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHh---------------------ccCceEEEEc
Confidence 689999999999999999999999 556888887532 1221110 1247889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.++||++||
T Consensus 56 D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS 135 (276)
T PRK06482 56 DVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS 135 (276)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 9996542111111111123468999999997642 2346678899999999999997432 25678999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.+..... ...+.|+.+|+..|.++
T Consensus 136 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 159 (276)
T PRK06482 136 EGGQIAY--------------------------------------------------------PGFSLYHATKWGIEGFV 159 (276)
T ss_pred cccccCC--------------------------------------------------------CCCchhHHHHHHHHHHH
Confidence 7532210 12357999999999998
Q ss_pred HHh-----hCCCcEEEEecCce---ecCCCCCCCCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVV---SGTYKEPFPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V---~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+ ..+++++++|||.+ +|+.... ....... ......+.+.... +. ..-+.+++|++++++
T Consensus 160 ~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~d~~~~~~a~~ 229 (276)
T PRK06482 160 EAVAQEVAPFGIEFTIVEPGPARTNFGAGLDR-GAPLDAYDDTPVGDLRRALAD--------GS-FAIPGDPQKMVQAMI 229 (276)
T ss_pred HHHHHHhhccCcEEEEEeCCccccCCcccccc-cCCCccccchhhHHHHHHHhh--------cc-CCCCCCHHHHHHHHH
Confidence 866 25899999999988 4433211 0000000 0001111111111 11 111357899999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
.++..... ...||++++ +..+..++++.+.+..+
T Consensus 230 ~~~~~~~~----~~~~~~g~~--~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 230 ASADQTPA----PRRLTLGSD--AYASIRAALSERLAALE 263 (276)
T ss_pred HHHcCCCC----CeEEecChH--HHHHHHHHHHHHHHHHH
Confidence 99863221 356999998 66788888887777765
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-20 Score=169.97 Aligned_cols=259 Identities=15% Similarity=0.142 Sum_probs=192.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|++||||-||+-|++|++.|++.| +.|+.+.|+....... -++.+ .......+++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~~ri~L~~------------------~~~~~~~~l~l~ 60 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNTPRIHLYE------------------DPHLNDPRLHLH 60 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCcccceecc------------------ccccCCceeEEE
Confidence 5899999999999999999999999 5568888874332110 02111 011123568899
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecce
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAY 164 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~ 164 (399)
.||++| ...+..+.+ ++|-|+|+||+.... +.+....+++..|+.+||++++...+ ..+|...||+.
T Consensus 61 ~gDLtD-------~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE 133 (345)
T COG1089 61 YGDLTD-------SSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE 133 (345)
T ss_pred eccccc-------hHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH
Confidence 999995 444445554 689999999987542 45566788899999999999998643 57899999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
.||.. .|.+.+|..| .-|.++|+.+|..+-.+..+
T Consensus 134 ~fG~v----~~~pq~E~TP-----------------------------------------FyPrSPYAvAKlYa~W~tvN 168 (345)
T COG1089 134 LYGLV----QEIPQKETTP-----------------------------------------FYPRSPYAVAKLYAYWITVN 168 (345)
T ss_pred hhcCc----ccCccccCCC-----------------------------------------CCCCCHHHHHHHHHHheeee
Confidence 99954 3555554433 45678999999999999988
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc-CCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
| ..|+-.+. |+.|-... |..|-..-.+.+...+.++..|....+. |+.++.|||-|..|-+++++.++++..+
T Consensus 169 YResYgl~Acn---GILFNHES-P~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~P 244 (345)
T COG1089 169 YRESYGLFACN---GILFNHES-PLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEP 244 (345)
T ss_pred hHhhcCceeec---ceeecCCC-CCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCC
Confidence 8 44543332 55555443 4444333335667777788888777764 8889999999999999999999986443
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
..|.+.++ ...|++|++++.++..|.
T Consensus 245 -----ddyViATg--~t~sVrefv~~Af~~~g~ 270 (345)
T COG1089 245 -----DDYVIATG--ETHSVREFVELAFEMVGI 270 (345)
T ss_pred -----CceEEecC--ceeeHHHHHHHHHHHcCc
Confidence 35999999 669999999999999984
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.9e-20 Score=164.73 Aligned_cols=244 Identities=16% Similarity=0.138 Sum_probs=181.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||++|.+|++|.+.+-+.|.+- .-.++.-+ -.+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~-e~wvf~~s-----------------------------------------kd~ 39 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDD-ENWVFIGS-----------------------------------------KDA 39 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCC-cceEEecc-----------------------------------------ccc
Confidence 789999999999999999998877521 11222111 146
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
|+++ ....+.+++ ++..|||+||.++. ....-..++.|+.-.-|++..|-+. ++++++.+.|.++|
T Consensus 40 DLt~-------~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIf 111 (315)
T KOG1431|consen 40 DLTN-------LADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIF 111 (315)
T ss_pred cccc-------hHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeec
Confidence 7885 233335554 68999999998753 2334556888999999999999996 89999999999999
Q ss_pred cCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
.+... +|+|+.....+| .+....|+.+|.+..-..+.|
T Consensus 112 Pdkt~yPIdEtmvh~gpp-----------------------------------------hpsN~gYsyAKr~idv~n~aY 150 (315)
T KOG1431|consen 112 PDKTSYPIDETMVHNGPP-----------------------------------------HPSNFGYSYAKRMIDVQNQAY 150 (315)
T ss_pred CCCCCCCCCHHHhccCCC-----------------------------------------CCCchHHHHHHHHHHHHHHHH
Confidence 87753 677776643322 233457999998888777777
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHH----HhhcCc-cccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV----ASAQGN-LRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
++|...+.+-|.+||||.++-.+ +....+..+++ +...|. ...++|.|...|.|+|++|+|+++++++..
T Consensus 151 ~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~ 227 (315)
T KOG1431|consen 151 RQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE 227 (315)
T ss_pred HHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh
Confidence 78999999999999999984322 22233334443 334444 456789999999999999999999999986
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
... .+..+++.++...+|++|+++.+.++++-
T Consensus 228 Y~~----vEpiils~ge~~EVtI~e~aeaV~ea~~F 259 (315)
T KOG1431|consen 228 YEG----VEPIILSVGESDEVTIREAAEAVVEAVDF 259 (315)
T ss_pred hcC----ccceEeccCccceeEHHHHHHHHHHHhCC
Confidence 544 35688888866689999999999999874
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=190.80 Aligned_cols=202 Identities=18% Similarity=0.252 Sum_probs=144.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||++|++.|+++| +.|.+++|..... ...+++++.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------------------------------~~~~ve~v~~ 47 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------------------------------LDPRVDYVCA 47 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------------------------------ccCCceEEEc
Confidence 589999999999999999999999 5568888754211 0146789999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|+++ .. ...++.++|+|||+|+.... .....|+.++.|++++|++. ++ ++||+||. +|..
T Consensus 48 Dl~d-------~~-l~~al~~~D~VIHLAa~~~~-----~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~--~G~~--- 107 (699)
T PRK12320 48 SLRN-------PV-LQELAGEADAVIHLAPVDTS-----APGGVGITGLAHVANAAARA-GA-RLLFVSQA--AGRP--- 107 (699)
T ss_pred cCCC-------HH-HHHHhcCCCEEEEcCccCcc-----chhhHHHHHHHHHHHHHHHc-CC-eEEEEECC--CCCC---
Confidence 9995 33 33666789999999986321 12357999999999999986 55 69999986 3321
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~ 252 (399)
..|. .+|.++.. .+++++
T Consensus 108 --------------------------------------------------------~~~~----~aE~ll~~--~~~p~~ 125 (699)
T PRK12320 108 --------------------------------------------------------ELYR----QAETLVST--GWAPSL 125 (699)
T ss_pred --------------------------------------------------------cccc----HHHHHHHh--cCCCEE
Confidence 1121 36766665 468999
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
++|+++|||+.... .....+..++.....+ ..+.+||++|++++++.++... . .++||++
T Consensus 126 ILR~~nVYGp~~~~-----~~~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~-~----~GiyNIG 185 (699)
T PRK12320 126 VIRIAPPVGRQLDW-----MVCRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTD-R----NGVVDLA 185 (699)
T ss_pred EEeCceecCCCCcc-----cHhHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCC-C----CCEEEEe
Confidence 99999999986421 0012222223222111 2344699999999999988631 1 3499999
Q ss_pred CCCCCcccHHHHHHHHHHh
Q 015874 333 SSLRNPVTLVSILDYGFVY 351 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~ 351 (399)
++ +.+|+.|+++++...
T Consensus 186 ~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 186 TP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred CC--CeeEHHHHHHHHHHh
Confidence 99 779999999888776
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=171.40 Aligned_cols=238 Identities=17% Similarity=0.224 Sum_probs=157.6
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..+...+|+|+||||||+||++++++|+++| ++|++++|+.+..... . . ...
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~---~--------------------~--~~~ 62 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDKAKTS---L--------------------P--QDP 62 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHHHHHh---c--------------------c--cCC
Confidence 3466778999999999999999999999999 5568888876432110 0 0 024
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++++++|+++. .+.+...+ .++|+|||+++...... ....++.|..++.++++++.+. ++++||++||++
T Consensus 63 ~~~~~~~Dl~d~------~~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~ 134 (251)
T PLN00141 63 SLQIVRADVTEG------SDKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSIL 134 (251)
T ss_pred ceEEEEeeCCCC------HHHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEEcccc
Confidence 688999999952 22233445 58999999988642211 1223467888999999999885 789999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+|+...+......+ .. ......|..+|..+|++++.
T Consensus 135 v~g~~~~~~~~~~~--------~~------------------------------------~~~~~~~~~~k~~~e~~l~~ 170 (251)
T PLN00141 135 VNGAAMGQILNPAY--------IF------------------------------------LNLFGLTLVAKLQAEKYIRK 170 (251)
T ss_pred ccCCCcccccCcch--------hH------------------------------------HHHHHHHHHHHHHHHHHHHh
Confidence 99854221000000 00 00012345678888888776
Q ss_pred hhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 245 SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 245 ~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
.+++++++||+.+++... .+ ........ .....+|+.+|+|+++..++..... .
T Consensus 171 --~gi~~~iirpg~~~~~~~---~~------------------~~~~~~~~-~~~~~~i~~~dvA~~~~~~~~~~~~-~- 224 (251)
T PLN00141 171 --SGINYTIVRPGGLTNDPP---TG------------------NIVMEPED-TLYEGSISRDQVAEVAVEALLCPES-S- 224 (251)
T ss_pred --cCCcEEEEECCCccCCCC---Cc------------------eEEECCCC-ccccCcccHHHHHHHHHHHhcChhh-c-
Confidence 689999999999987532 00 10000111 1123579999999999999874332 2
Q ss_pred CCcEEEecCCCCC-cccHHHHHHHHHH
Q 015874 325 DANIYHVGSSLRN-PVTLVSILDYGFV 350 (399)
Q Consensus 325 ~~~~yni~~~~~~-~~s~~el~~~l~~ 350 (399)
+.++.+.+...+ ..++.+++..+++
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 225 -YKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred -CcEEEEecCCCCCchhHHHHHHHhhc
Confidence 467777763223 3889999888765
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.6e-20 Score=173.27 Aligned_cols=236 Identities=17% Similarity=0.133 Sum_probs=149.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++||||||+|+||+++++.|+++|+ .|.+..|+....... .+.+ .. .+.++.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~---~v~~~~r~~~~~~~~---~~~~---------~~---------~~~~~~ 59 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGA---AVAIADLNQDGANAV---ADEI---------NK---------AGGKAI 59 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHH---HHHH---------Hh---------cCceEE
Confidence 46789999999999999999999999995 457778876432111 1111 00 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHH----HHHHHHHH-HhccCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLG----VIHLVNFA-KKCVKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~----~~~ll~~a-~~~~~~~~ 156 (399)
++++|+++++......+.......++|+|||+|+.... .+.++..+++|+.+ +.++++++ +. .+.++
T Consensus 60 ~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~~~ 138 (262)
T PRK13394 60 GVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-DRGGV 138 (262)
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCCcE
Confidence 89999996432111111111122458999999997532 24466778899999 55555555 44 36789
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 139 iv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~ 162 (262)
T PRK13394 139 VIYMGSVHSHEAS--------------------------------------------------------PLKSAYVTAKH 162 (262)
T ss_pred EEEEcchhhcCCC--------------------------------------------------------CCCcccHHHHH
Confidence 9999997433211 12356999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCC-CCCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
..+.+++.+ ..+++++++||+.++++.... .+...... ........ .+...+....++++++|++
T Consensus 163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~dva 234 (262)
T PRK13394 163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK--------KVMLGKTVDGVFTTVEDVA 234 (262)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH--------HHHhcCCCCCCCCCHHHHH
Confidence 999888766 358999999999999875311 00000000 00001111 1122334567899999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++....... .+..|+++++
T Consensus 235 ~a~~~l~~~~~~~~-~g~~~~~~~g 258 (262)
T PRK13394 235 QTVLFLSSFPSAAL-TGQSFVVSHG 258 (262)
T ss_pred HHHHHHcCccccCC-cCCEEeeCCc
Confidence 99999986432211 2678888876
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.4e-19 Score=158.04 Aligned_cols=182 Identities=22% Similarity=0.308 Sum_probs=141.2
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|+||||++|+.++++|+++| ++|++++|+..+... ..+++++.+|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSKAED-----------------------------SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGHHH-----------------------------CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchhccc-----------------------------ccccccceeee
Confidence 7999999999999999999999 678999999764311 27999999999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCccc
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~~~ 174 (399)
. +.+.+...+.++|+|||+++.... +...+.++++++++. ++++++++||.++|....+...
T Consensus 49 ~-------d~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~ 110 (183)
T PF13460_consen 49 F-------DPDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFS 110 (183)
T ss_dssp T-------CHHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEE
T ss_pred h-------hhhhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcccc
Confidence 9 566666888899999999976333 167788999999996 8999999999999986543211
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEEEE
Q 015874 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254 (399)
Q Consensus 175 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~i~ 254 (399)
... ......|...|..+|+.++. .+++++++
T Consensus 111 ~~~-----------------------------------------------~~~~~~~~~~~~~~e~~~~~--~~~~~~iv 141 (183)
T PF13460_consen 111 DED-----------------------------------------------KPIFPEYARDKREAEEALRE--SGLNWTIV 141 (183)
T ss_dssp GGT-----------------------------------------------CGGGHHHHHHHHHHHHHHHH--STSEEEEE
T ss_pred ccc-----------------------------------------------ccchhhhHHHHHHHHHHHHh--cCCCEEEE
Confidence 100 01124688999999999876 69999999
Q ss_pred ecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 255 Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
||+.+||...+.. . .....+.....+|+.+|+|++++.++.
T Consensus 142 rp~~~~~~~~~~~-~---------------------~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 142 RPGWIYGNPSRSY-R---------------------LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EESEEEBTTSSSE-E---------------------EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ECcEeEeCCCcce-e---------------------EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 9999999875210 0 111133456699999999999999885
|
... |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-19 Score=188.61 Aligned_cols=221 Identities=13% Similarity=0.075 Sum_probs=148.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..|+||||||+||||++|++.|.++|++| .. .
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v---~~---------------------------------------------~ 410 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY---EY---------------------------------------------G 410 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE---Ee---------------------------------------------e
Confidence 45899999999999999999999988543 11 1
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
.+|+++ .+.+...+. ++|+|||+||..+. ..++..++++|+.++.+|+++|++. +++ ++++||
T Consensus 411 ~~~l~d-------~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss 481 (668)
T PLN02260 411 KGRLED-------RSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFAT 481 (668)
T ss_pred cccccc-------HHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcc
Confidence 234442 233333333 78999999998742 2356788999999999999999996 664 678888
Q ss_pred ceeecCcCC-c-cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 163 AYVAGERTG-L-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 163 ~~v~~~~~~-~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
.+||+.... . -...+++|+++ +..+.+.|+.+|.++|+
T Consensus 482 ~~v~~~~~~~~~~~~~p~~E~~~----------------------------------------~~~~~~~Yg~sK~~~E~ 521 (668)
T PLN02260 482 GCIFEYDAKHPEGSGIGFKEEDK----------------------------------------PNFTGSFYSKTKAMVEE 521 (668)
T ss_pred cceecCCcccccccCCCCCcCCC----------------------------------------CCCCCChhhHHHHHHHH
Confidence 899874210 0 00112332211 11223789999999999
Q ss_pred HHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 241 LMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 241 ~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
+++.+ -+..++|+..+||..... . . .++..+......... ..+..+++|++.+++.++.. .
T Consensus 522 ~~~~~---~~~~~~r~~~~~~~~~~~------~-~---nfv~~~~~~~~~~~v-----p~~~~~~~~~~~~~~~l~~~-~ 582 (668)
T PLN02260 522 LLREY---DNVCTLRVRMPISSDLSN------P-R---NFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKR-N 582 (668)
T ss_pred HHHhh---hhheEEEEEEecccCCCC------c-c---HHHHHHhccceeecc-----CCCceehhhHHHHHHHHHHh-C
Confidence 99875 256788888888743210 0 1 223333332221111 13467788999888888762 1
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
. +++||++++ ..+||.|+++.+++.++
T Consensus 583 ~----~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 583 L----RGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred C----CceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 1 479999998 77999999999999874
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-19 Score=172.13 Aligned_cols=210 Identities=14% Similarity=0.142 Sum_probs=146.1
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|+||||||+||++++++|++.| +.|.+++|+.+... ..+++.+.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~------------------------------~~~~~~~~~d 47 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSA------------------------------GPNEKHVKFD 47 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCcccc------------------------------CCCCcccccc
Confidence 48999999999999999999999 45699999876431 1356667899
Q ss_pred CCCCCCCCCchhhHHHHh------cC-ccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 94 ISSEDLGLKDSNLKEELW------NE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~------~~-~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+.+ .+.+...+ .+ +|.|+|+++.... ....+.+++++|++. ++++||++||.+++
T Consensus 48 ~~d-------~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~----------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 48 WLD-------EDTWDNPFSSDDGMEPEISAVYLVAPPIPD----------LAPPMIKFIDFARSK-GVRRFVLLSASIIE 109 (285)
T ss_pred CCC-------HHHHHHHHhcccCcCCceeEEEEeCCCCCC----------hhHHHHHHHHHHHHc-CCCEEEEeeccccC
Confidence 984 44444555 56 9999999874321 123456889999986 89999999987543
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
... ..+...|..+++.
T Consensus 110 ~~~---------------------------------------------------------------~~~~~~~~~l~~~- 125 (285)
T TIGR03649 110 KGG---------------------------------------------------------------PAMGQVHAHLDSL- 125 (285)
T ss_pred CCC---------------------------------------------------------------chHHHHHHHHHhc-
Confidence 210 0112234444331
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.+++....+. + ...+.. ....+.+.++..+++++++|+|+++..++..... . +
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~--~----------~~~~~~-~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~-~--~ 189 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEF--H----------VEAIRK-ENKIYSATGDGKIPFVSADDIARVAYRALTDKVA-P--N 189 (285)
T ss_pred cCCCEEEEeccHHhhhhcccc--c----------cccccc-CCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc-C--C
Confidence 489999999998886432110 0 011111 1122334466789999999999999999874222 1 5
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.|+++++ ..+|+.|+++.+.+.+|++.
T Consensus 190 ~~~~l~g~--~~~s~~eia~~l~~~~g~~v 217 (285)
T TIGR03649 190 TDYVVLGP--ELLTYDDVAEILSRVLGRKI 217 (285)
T ss_pred CeEEeeCC--ccCCHHHHHHHHHHHhCCce
Confidence 78999998 77999999999999999754
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.3e-19 Score=164.60 Aligned_cols=234 Identities=14% Similarity=0.096 Sum_probs=150.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++||||||+|+||++++++|+++| ++|.++.|+..... ++.+.+ . ..+.++.++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~~~---~~~~~~---------~---------~~~~~~~~~~ 56 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAGAE---AAAKVA---------T---------DAGGSVIYLV 56 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------H---------hcCCceEEEE
Confidence 4789999999999999999999999 45788888754322 222111 0 0124688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+|+++++......+...+...++|+|||+|+.... .+.++..++.|+.++..+++.+.+. .+.++||++|
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~s 136 (255)
T TIGR01963 57 ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIA 136 (255)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 99996432111111222334568999999987532 2345667889999988888877431 2567999999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|.+.+... .....|+.+|...+.+
T Consensus 137 s~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 137 SAHGLVAS--------------------------------------------------------PFKSAYVAAKHGLIGL 160 (255)
T ss_pred chhhcCCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 97554421 1125699999999988
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCC-CCCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
++.+ ..+++++++||+.++++.... .+...... ......+. .....+...+++++++|+|++++.
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~d~a~~~~~ 232 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIR--------EVMLPGQPTKRFVTVDEVAETALF 232 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHH--------HHHHccCccccCcCHHHHHHHHHH
Confidence 8765 248999999999999864310 00000000 00000000 001123456789999999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... ..++.|+++++
T Consensus 233 ~~~~~~~~-~~g~~~~~~~g 251 (255)
T TIGR01963 233 LASDAAAG-ITGQAIVLDGG 251 (255)
T ss_pred HcCccccC-ccceEEEEcCc
Confidence 99742221 12678999876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=166.75 Aligned_cols=245 Identities=12% Similarity=0.107 Sum_probs=159.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||+|+||++++++|+++| ++|.+++|+.... +.+.+. ...++.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~---~~~~~~---------------------~~~~~~~~ 54 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTATL---ADLAEK---------------------YGDRLLPL 54 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHh---------------------ccCCeeEE
Confidence 46899999999999999999999999 5668888875432 111110 12467888
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
++|+++++......+...+...++|+|||+||.... .+.++..+++|+.++..+++.+.+. .+.+++|++
T Consensus 55 ~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~v 134 (275)
T PRK08263 55 ALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQI 134 (275)
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999997543111111111223468999999997642 2567888999999998888876431 256789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.+.+.... ....|+.+|+..+.
T Consensus 135 sS~~~~~~~~--------------------------------------------------------~~~~Y~~sKaa~~~ 158 (275)
T PRK08263 135 SSIGGISAFP--------------------------------------------------------MSGIYHASKWALEG 158 (275)
T ss_pred cChhhcCCCC--------------------------------------------------------CccHHHHHHHHHHH
Confidence 9986654321 12469999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCe-eeHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV-IPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~~i~~ 314 (399)
+.+.. ..|++++++|||.+.++...+.................. .+......+ +..+|+|++++.
T Consensus 159 ~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 159 MSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREEL---------AEQWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHH---------HHHHHhccCCCCHHHHHHHHHH
Confidence 88765 368999999999988755421111111111111111110 000112334 789999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhh
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~ 352 (399)
++..... + ++.|+..++ ..+++.++.+.+.++-
T Consensus 230 l~~~~~~-~--~~~~~~~~~--~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 230 LVDAENP-P--LRLFLGSGV--LDLAKADYERRLATWE 262 (275)
T ss_pred HHcCCCC-C--eEEEeCchH--HHHHHHHHHHHHHHHH
Confidence 9974322 2 344444444 5688999999998873
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=164.06 Aligned_cols=236 Identities=15% Similarity=0.106 Sum_probs=150.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||++++++|+++| ++|.++.|+....... .+++ .. .+.++++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~~~~---~~~~---------~~---------~~~~~~~ 57 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAAAAA---AEAL---------QK---------AGGKAIG 57 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHHHHH---HHHH---------Hh---------cCCcEEE
Confidence 467899999999999999999999999 5668888876543221 1111 00 1357888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+........+|+|||+|+.... .+.++..++.|+.++.++++.+... .+.++||+
T Consensus 58 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 137 (258)
T PRK12429 58 VAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIIN 137 (258)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEE
Confidence 9999996542211112222223468999999986532 2345667888999977766665432 36789999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... ...+.|+.+|.+.+
T Consensus 138 iss~~~~~~~--------------------------------------------------------~~~~~y~~~k~a~~ 161 (258)
T PRK12429 138 MASVHGLVGS--------------------------------------------------------AGKAAYVSAKHGLI 161 (258)
T ss_pred EcchhhccCC--------------------------------------------------------CCcchhHHHHHHHH
Confidence 9998554321 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+ ..+++++++|||.+.++..... ....... ......+. ...........+++++|+|+++
T Consensus 162 ~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~d~a~~~ 233 (258)
T PRK12429 162 GLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLE--------DVLLPLVPQKRFTTVEEIADYA 233 (258)
T ss_pred HHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHH--------HHHhccCCccccCCHHHHHHHH
Confidence 888755 3579999999999998654110 0000000 00000000 0111222346799999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++....... .++.|+++++
T Consensus 234 ~~l~~~~~~~~-~g~~~~~~~g 254 (258)
T PRK12429 234 LFLASFAAKGV-TGQAWVVDGG 254 (258)
T ss_pred HHHcCccccCc-cCCeEEeCCC
Confidence 98886432221 2678988876
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-19 Score=166.66 Aligned_cols=233 Identities=18% Similarity=0.208 Sum_probs=152.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||.++++.|+++| ++|.+..|+.... ++..+.+ ..++.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------------------~~~~~~ 56 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPARA---RLAALEI---------------------GPAAIA 56 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHHHh---------------------CCceEE
Confidence 668999999999999999999999999 5568887765432 2211111 245788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--c--CCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V--KLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~--~~~~~v 158 (399)
+.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++.++++++.+. . ...+||
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 136 (257)
T PRK07067 57 VSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKII 136 (257)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999996543221122222223468999999997532 2457778999999999999998653 1 125799
Q ss_pred EEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 159 HVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 159 ~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
++||... ++. .+...|+.+|..
T Consensus 137 ~~sS~~~~~~~---------------------------------------------------------~~~~~Y~~sK~a 159 (257)
T PRK07067 137 NMASQAGRRGE---------------------------------------------------------ALVSHYCATKAA 159 (257)
T ss_pred EeCCHHhCCCC---------------------------------------------------------CCCchhhhhHHH
Confidence 9998632 221 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.. ..++++++++||.|+++........... . .....+......+.......+++.+|+|+++
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 232 (257)
T PRK07067 160 VISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFAR------Y-ENRPPGEKKRLVGEAVPLGRMGVPDDLTGMA 232 (257)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhh------c-cCCCHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence 99888765 4689999999999998653111000000 0 0000000011122233456799999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+.+|++.++
T Consensus 233 ~~l~s~~~~-~~~g~~~~v~gg 253 (257)
T PRK07067 233 LFLASADAD-YIVAQTYNVDGG 253 (257)
T ss_pred HHHhCcccc-cccCcEEeecCC
Confidence 998874322 123689999887
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-18 Score=161.76 Aligned_cols=235 Identities=12% Similarity=0.108 Sum_probs=147.4
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+++|+++||||+|+||++++++|+++|+ +|.++.|+... ....+++ .. .+.+
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~~~----~~~~~~~---------~~---------~~~~ 57 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSELV----HEVAAEL---------RA---------AGGE 57 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCchHH----HHHHHHH---------Hh---------cCCe
Confidence 3457889999999999999999999999994 56777776421 1111111 00 1246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
+.++.+|+++++......+...+...++|++||+||.... .+.++..+++|+.++..+++.+.+. .+..
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g 137 (260)
T PRK12823 58 ALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG 137 (260)
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 7889999997543111111111223468999999985321 2456777889999988777766542 2456
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...++. ....|+.+|
T Consensus 138 ~iv~~sS~~~~~~----------------------------------------------------------~~~~Y~~sK 159 (260)
T PRK12823 138 AIVNVSSIATRGI----------------------------------------------------------NRVPYSAAK 159 (260)
T ss_pred eEEEEcCccccCC----------------------------------------------------------CCCccHHHH
Confidence 8999999876541 124699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCC---ccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
++.+.+++.+ ..++++++++||.|+++....... ... .......++.....+.+ ..-+.+.+
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 230 (260)
T PRK12823 160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKRYGTID 230 (260)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------cccCCCHH
Confidence 9999998876 348999999999999963210000 000 00111122222222111 11234689
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|++++.++.... ..-.+.+|++.++
T Consensus 231 dva~~~~~l~s~~~-~~~~g~~~~v~gg 257 (260)
T PRK12823 231 EQVAAILFLASDEA-SYITGTVLPVGGG 257 (260)
T ss_pred HHHHHHHHHcCccc-ccccCcEEeecCC
Confidence 99999998886322 1112678888776
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-18 Score=159.16 Aligned_cols=228 Identities=13% Similarity=0.086 Sum_probs=141.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++||||||+|+||++++++|+++| .+|+++.|+... ..+.+.+.+ . ......+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~--~~~~~~~~~---------~--------~~~~~~~~~ 61 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAA--EADALAAEL---------N--------ALRPGSAAA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHH---------H--------hhcCCceEE
Confidence 456899999999999999999999999 556888876432 111111111 0 001235788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
+.+|+++.+......+.....+.++|+|||+||.... .+.++..++.|+.++.++++++.+. .....++++
T Consensus 62 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~ 141 (249)
T PRK09135 62 LQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI 141 (249)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE
Confidence 9999996332111111111112368999999996421 2346778899999999999998753 122345555
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
|+.. +.. +..+.+.|+.+|..+|.
T Consensus 142 ~~~~--~~~------------------------------------------------------~~~~~~~Y~~sK~~~~~ 165 (249)
T PRK09135 142 TDIH--AER------------------------------------------------------PLKGYPVYCAAKAALEM 165 (249)
T ss_pred eChh--hcC------------------------------------------------------CCCCchhHHHHHHHHHH
Confidence 5422 110 11234679999999999
Q ss_pred HHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 241 LMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 241 ~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
+++.+ ..+++++++||+.++|+.... .+. ...........+ ...+.+++|+|+++..++
T Consensus 166 ~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~~-------~~~~~~~~~~~~--------~~~~~~~~d~a~~~~~~~ 228 (249)
T PRK09135 166 LTRSLALELAPEVRVNAVAPGAILWPEDGN--SFD-------EEARQAILARTP--------LKRIGTPEDIAEAVRFLL 228 (249)
T ss_pred HHHHHHHHHCCCCeEEEEEeccccCccccc--cCC-------HHHHHHHHhcCC--------cCCCcCHHHHHHHHHHHc
Confidence 99876 236999999999999987521 111 111111111111 111234899999997766
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
...... .+.+||++++
T Consensus 229 ~~~~~~--~g~~~~i~~g 244 (249)
T PRK09135 229 ADASFI--TGQILAVDGG 244 (249)
T ss_pred Cccccc--cCcEEEECCC
Confidence 532212 2789999998
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=160.57 Aligned_cols=228 Identities=15% Similarity=0.101 Sum_probs=150.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||.+++++|+++| ++|.+++|+..+.... .+.+ .. ...++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~---~~~l---------~~---------~~~~~~~ 59 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDDAAAT---AELV---------EA---------AGGKARA 59 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH---HHHH---------Hh---------cCCeEEE
Confidence 567899999999999999999999999 5678898875432211 1111 00 1245888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|+|||+|+.... .+.+...++.|+.++.++++++.+. .+.++|++
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 139 (251)
T PRK12826 60 RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVL 139 (251)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 9999996432111111111122368999999987643 2456778999999999999987532 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...++.. ......|+.+|...+
T Consensus 140 ~ss~~~~~~~-------------------------------------------------------~~~~~~y~~sK~a~~ 164 (251)
T PRK12826 140 TSSVAGPRVG-------------------------------------------------------YPGLAHYAASKAGLV 164 (251)
T ss_pred EechHhhccC-------------------------------------------------------CCCccHHHHHHHHHH
Confidence 9998655110 012356999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++||+.++|+...+.. . . .+...... . .....+++++|+|+++..
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---~--~---~~~~~~~~-~--------~~~~~~~~~~dva~~~~~ 227 (251)
T PRK12826 165 GFTRALALELAARNITVNSVHPGGVDTPMAGNLG---D--A---QWAEAIAA-A--------IPLGRLGEPEDIAAAVLF 227 (251)
T ss_pred HHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC---c--h---HHHHHHHh-c--------CCCCCCcCHHHHHHHHHH
Confidence 998876 34899999999999997652211 0 0 00111111 0 111257899999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+++|++.++
T Consensus 228 l~~~~~~-~~~g~~~~~~~g 246 (251)
T PRK12826 228 LASDEAR-YITGQTLPVDGG 246 (251)
T ss_pred HhCcccc-CcCCcEEEECCC
Confidence 7753221 112789999876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.1e-18 Score=157.83 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=150.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+||||||||+||++++++|+++|+ .|.++.|+.... .+.+.+.+ . ....++.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~---~v~~~~~~~~~~--~~~~~~~~---------~---------~~~~~~~~ 60 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA---DVVVHYRSDEEA--AEELVEAV---------E---------ALGRRAQA 60 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCCHHH--HHHHHHHH---------H---------hcCCceEE
Confidence 5578999999999999999999999995 456666665432 11111111 0 01356889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++...+..+.......++|+|||+||.... .+.+...+++|+.+..++++.+.+. .+.++||+
T Consensus 61 ~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~ 140 (249)
T PRK12825 61 VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVN 140 (249)
T ss_pred EECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996432111111111122468999999996532 2345777899999999999887431 25789999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 141 ~SS~~~~~~~--------------------------------------------------------~~~~~y~~sK~~~~ 164 (249)
T PRK12825 141 ISSVAGLPGW--------------------------------------------------------PGRSNYAAAKAGLV 164 (249)
T ss_pred ECccccCCCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 9998766421 11356999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++||+.++|+...... .. ..... . +.. ....+++.+|+|+++..
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---~~-----~~~~~----~-~~~-----~~~~~~~~~dva~~~~~ 226 (249)
T PRK12825 165 GLTKALARELAEYGITVNMVAPGDIDTDMKEATI---EE-----AREAK----D-AET-----PLGRSGTPEDIARAVAF 226 (249)
T ss_pred HHHHHHHHHHhhcCeEEEEEEECCccCCcccccc---ch-----hHHhh----h-ccC-----CCCCCcCHHHHHHHHHH
Confidence 888765 35899999999999997652210 00 00100 0 011 12338999999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++... .....+++|+++++
T Consensus 227 ~~~~~-~~~~~g~~~~i~~g 245 (249)
T PRK12825 227 LCSDA-SDYITGQVIEVTGG 245 (249)
T ss_pred HhCcc-ccCcCCCEEEeCCC
Confidence 88632 22223789999987
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=163.10 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=160.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||+++++.|+++| ++|.++.|+.... +...+++ ... + ...++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-~------~~~~~~~ 62 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDKL---AAAAEEI---------EAL-K------GAGAVRY 62 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHH---------Hhc-c------CCCceEE
Confidence 678999999999999999999999999 4568888875432 1111111 000 0 0246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.+...+++|+.++.++++++.+. .+..+|+
T Consensus 63 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (276)
T PRK05875 63 EPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV 142 (276)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999996432111111111112378999999986421 2346677899999999999877553 2345899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... ++.+.|+.+|.+.
T Consensus 143 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 166 (276)
T PRK05875 143 GISSIAASNTH--------------------------------------------------------RWFGAYGVTKSAV 166 (276)
T ss_pred EEechhhcCCC--------------------------------------------------------CCCcchHHHHHHH
Confidence 99998764421 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
|.+++.+ ..+++++++|||.+.++.... .... ......... ......+++++|+|+++.
T Consensus 167 ~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~---~~~~----~~~~~~~~~---------~~~~~~~~~~~dva~~~~ 230 (276)
T PRK05875 167 DHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP---ITES----PELSADYRA---------CTPLPRVGEVEDVANLAM 230 (276)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCccCCccccc---cccC----HHHHHHHHc---------CCCCCCCcCHHHHHHHHH
Confidence 9999876 357999999999987654311 0000 011111111 011234677999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcc----cHHHHHHHHHHhhc
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPV----TLVSILDYGFVYFT 353 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~----s~~el~~~l~~~~~ 353 (399)
.++..... .-.+.+|+++++ ..+ +..|+++.+.+..+
T Consensus 231 ~l~~~~~~-~~~g~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 231 FLLSDAAS-WITGQVINVDGG--HMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred HHcCchhc-CcCCCEEEECCC--eeccCCccHHHHHHHHhhHHH
Confidence 99874322 112678999887 334 78888887776544
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-18 Score=159.79 Aligned_cols=228 Identities=16% Similarity=0.155 Sum_probs=145.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++++|+||||+|+||++++++|+++|+ +|.++ .|+.+.. +...+.+ .. .+.+++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~---~v~i~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 59 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRNKQAA---DETIREI---------ES---------NGGKAF 59 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 6679999999999999999999999995 44554 4544221 1111111 00 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
++.+|+++++......+.....+ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 60 ~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 139 (254)
T PRK12746 60 LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE 139 (254)
T ss_pred EEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence 89999996432111111110111 258999999997532 1335667889999999999998763 344
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||..++... .....|+.+
T Consensus 140 ~~~v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 163 (254)
T PRK12746 140 GRVINISSAEVRLGF--------------------------------------------------------TGSIAYGLS 163 (254)
T ss_pred CEEEEECCHHhcCCC--------------------------------------------------------CCCcchHhh
Confidence 689999998765422 123569999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.|.+++.+ ..++++++++||.+.++..... ... ..+...... ......+++++|+|
T Consensus 164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~-----~~~~~~~~~--------~~~~~~~~~~~dva 227 (254)
T PRK12746 164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL---LDD-----PEIRNFATN--------SSVFGRIGQVEDIA 227 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh---ccC-----hhHHHHHHh--------cCCcCCCCCHHHHH
Confidence 99999987665 3579999999999988654211 000 001111110 11123567899999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++.... ..-.+.+|+++++
T Consensus 228 ~~~~~l~~~~~-~~~~g~~~~i~~~ 251 (254)
T PRK12746 228 DAVAFLASSDS-RWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHcCccc-CCcCCCEEEeCCC
Confidence 99988876322 2112678999875
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=161.81 Aligned_cols=229 Identities=15% Similarity=0.093 Sum_probs=150.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||++++++|+++| ++|.+..|+..+.. ...+.+ .. .+.++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~~~---~~~~~i---------~~---------~~~~~~ 62 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAKLA---AAAESL---------KG---------QGLSAH 62 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHH---HHHHHH---------Hh---------cCceEE
Confidence 3689999999999999999999999999 45678888754321 111111 10 124578
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+........+|+|||+||.... .+.++..+++|+.++.++++++.+. ++..++|
T Consensus 63 ~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (255)
T PRK07523 63 ALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKII 142 (255)
T ss_pred EEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence 89999996442111111111223468999999997532 2456777889999999999988753 2457899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 143 ~iss~~~~~~~--------------------------------------------------------~~~~~y~~sK~a~ 166 (255)
T PRK07523 143 NIASVQSALAR--------------------------------------------------------PGIAPYTATKGAV 166 (255)
T ss_pred EEccchhccCC--------------------------------------------------------CCCccHHHHHHHH
Confidence 99987533211 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..|++++++|||.+.++..... ... ......... . .....+...+|+|++++
T Consensus 167 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~---~~~----~~~~~~~~~-~--------~~~~~~~~~~dva~~~~ 230 (255)
T PRK07523 167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL---VAD----PEFSAWLEK-R--------TPAGRWGKVEELVGACV 230 (255)
T ss_pred HHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh---ccC----HHHHHHHHh-c--------CCCCCCcCHHHHHHHHH
Confidence 9998866 4589999999999988754111 000 011111111 1 11234678999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 231 ~l~~~~~~-~~~G~~i~~~gg 250 (255)
T PRK07523 231 FLASDASS-FVNGHVLYVDGG 250 (255)
T ss_pred HHcCchhc-CccCcEEEECCC
Confidence 98863222 112678888887
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=160.20 Aligned_cols=228 Identities=16% Similarity=0.157 Sum_probs=146.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEE-EEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYL-FVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~-~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
|.+++|+||||+|+||+++++.|+++|++| .+ ..|+.... +...+++ .. .+.++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v---~~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 57 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDI---AVNYARSRKAA---EETAEEI---------EA---------LGRKAL 57 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE---EEEcCCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 467899999999999999999999999543 44 45654322 1111111 00 135688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+........+|+|||+||.... .+.+...+++|+.++.++++++.+. .+.++||
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 137 (250)
T PRK08063 58 AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137 (250)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 89999996542111111111223468999999986432 1345556889999999999888753 2456999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|++.
T Consensus 138 ~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK~a~ 161 (250)
T PRK08063 138 SLSSLGSIRYL--------------------------------------------------------ENYTTVGVSKAAL 161 (250)
T ss_pred EEcchhhccCC--------------------------------------------------------CCccHHHHHHHHH
Confidence 99997543311 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
|.+++.+ ..++++++++||.+.++....++.. ..+.... ... .....+++.+|+|++++
T Consensus 162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~-~~~--------~~~~~~~~~~dva~~~~ 225 (250)
T PRK08063 162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDA-RAK--------TPAGRMVEPEDVANAVL 225 (250)
T ss_pred HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHH-hcC--------CCCCCCcCHHHHHHHHH
Confidence 9999876 3689999999999977553211111 0111111 111 01224688999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... ...++.+++.++
T Consensus 226 ~~~~~~~~-~~~g~~~~~~gg 245 (250)
T PRK08063 226 FLCSPEAD-MIRGQTIIVDGG 245 (250)
T ss_pred HHcCchhc-CccCCEEEECCC
Confidence 98863222 112678888876
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=162.92 Aligned_cols=235 Identities=14% Similarity=0.087 Sum_probs=148.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+++|+||||+|+||+++++.|+++| ++|.+.+|+.+........... .....++++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~~ 58 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQENLLSQATQ-------------------LNLQQNIKV 58 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh-------------------cCCCCceeE
Confidence 357899999999999999999999999 5568888876443222111100 001247889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++.... .+.....+.++|+|||+||.... .+.++..++.|+.++.++++.+.+. .+..+||+
T Consensus 59 ~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 137 (280)
T PRK06914 59 QQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIIN 137 (280)
T ss_pred EecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999997543211 11111223568999999987542 1456677889999999998886431 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..... .....|+.+|...+
T Consensus 138 vsS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~ 161 (280)
T PRK06914 138 ISSISGRVGF--------------------------------------------------------PGLSPYVSSKYALE 161 (280)
T ss_pred ECcccccCCC--------------------------------------------------------CCCchhHHhHHHHH
Confidence 9986432211 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCccc----CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE----DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+++.+ ..+++++++|||.+.++.......... .-......+..... .+ . .....+++++|+|+
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~--~~~~~~~~~~dva~ 234 (280)
T PRK06914 162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK----HI-N--SGSDTFGNPIDVAN 234 (280)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH----HH-h--hhhhccCCHHHHHH
Confidence 988765 458999999999998874321100000 00000011111110 00 1 12345788999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... ...|+++++
T Consensus 235 ~~~~~~~~~~~----~~~~~~~~~ 254 (280)
T PRK06914 235 LIVEIAESKRP----KLRYPIGKG 254 (280)
T ss_pred HHHHHHcCCCC----CcccccCCc
Confidence 99999974322 246888876
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=160.69 Aligned_cols=244 Identities=14% Similarity=0.028 Sum_probs=152.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||+|+||+++++.|+++|+ +|.+..|+.... +...+++ .. .+.++.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~~~l---~~~~~~l---------~~---------~~~~~~ 58 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKPGL---RQAVNHL---------RA---------EGFDVH 58 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 36789999999999999999999999994 557777765322 2222111 00 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~ 157 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++... ++ ..++
T Consensus 59 ~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~i 138 (275)
T PRK05876 59 GVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHV 138 (275)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 89999996543211111111223468999999997431 2456777899999999999987642 12 4689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .+...|+.+|..
T Consensus 139 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a 162 (275)
T PRK05876 139 VFTASFAGLVPN--------------------------------------------------------AGLGAYGVAKYG 162 (275)
T ss_pred EEeCChhhccCC--------------------------------------------------------CCCchHHHHHHH
Confidence 999998655421 223579999997
Q ss_pred HHHHHHH----h-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQ----S-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~----~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+. + ..++++++++||.+.++.......... ............+.....+++++++|+|+++
T Consensus 163 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 233 (275)
T PRK05876 163 VVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG---------AACAQSSTTGSPGPLPLQDDNLGVDDIAQLT 233 (275)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC---------ccccccccccccccccccccCCCHHHHHHHH
Confidence 5555543 3 468999999999988764311000000 0000000111123333457889999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhh
Q 015874 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~ 352 (399)
+.++.+. +.|.+.+. .....+.+...+..
T Consensus 234 ~~ai~~~-------~~~~~~~~----~~~~~~~~~~~~~~ 262 (275)
T PRK05876 234 ADAILAN-------RLYVLPHA----ASRASIRRRFERID 262 (275)
T ss_pred HHHHHcC-------CeEEecCh----hhHHHHHHHHHHHH
Confidence 9999732 34555433 34555555554443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=160.08 Aligned_cols=229 Identities=14% Similarity=0.145 Sum_probs=147.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+++||||+|+||++++++|+++| .+|.+.+|+.... .+..+.+ .. .+.++.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 62 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEKC---EELVDKI---------RA---------DGGEAV 62 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 3667899999999999999999999999 4567777764322 1111111 00 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+.......++|+|||+||.... .+.++..+++|+.++.++++.+.+. .+..+||
T Consensus 63 ~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv 142 (274)
T PRK07775 63 AFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLI 142 (274)
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEE
Confidence 88999996543211111111223468999999997532 1345667899999999999887542 2456799
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|++.
T Consensus 143 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 166 (274)
T PRK07775 143 FVGSDVALRQR--------------------------------------------------------PHMGAYGAAKAGL 166 (274)
T ss_pred EECChHhcCCC--------------------------------------------------------CCcchHHHHHHHH
Confidence 99998665421 1134699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
|.+++.+ ..+++++++|||.+.+....... . .....++..... .+ +.....+++++|+|++++
T Consensus 167 ~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~---~--~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~ 234 (274)
T PRK07775 167 EAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLP---A--EVIGPMLEDWAK------WG-QARHDYFLRASDLARAIT 234 (274)
T ss_pred HHHHHHHHHHhcccCeEEEEEeCCcccCcccccCC---h--hhhhHHHHHHHH------hc-ccccccccCHHHHHHHHH
Confidence 9999876 24899999999987654321100 0 001111111111 01 122456899999999999
Q ss_pred HHHHhccCCCCCCcEEEecC
Q 015874 314 VAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~ 333 (399)
.++... . + +.+||+.-
T Consensus 235 ~~~~~~-~--~-~~~~~~~~ 250 (274)
T PRK07775 235 FVAETP-R--G-AHVVNMEV 250 (274)
T ss_pred HHhcCC-C--C-CCeeEEee
Confidence 988732 2 1 46788754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=155.89 Aligned_cols=224 Identities=17% Similarity=0.145 Sum_probs=148.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||++++++|+++| ++|.++.|+.... +++.+++ .. ...++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 59 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGA---ERVAKQI---------VA---------DGGTAIA 59 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 578999999999999999999999999 5568888875432 2222111 00 0235678
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.+|+++.+......+...+....+|+|||+||.... .+.++..+++|+.++.++++++.+. .+.++
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (250)
T PRK07774 60 VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA 139 (250)
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence 8999996432111111111223468999999997421 1345667899999999999988764 23568
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||.+.+.. .+.|+.+|+
T Consensus 140 iv~~sS~~~~~~-----------------------------------------------------------~~~Y~~sK~ 160 (250)
T PRK07774 140 IVNQSSTAAWLY-----------------------------------------------------------SNFYGLAKV 160 (250)
T ss_pred EEEEecccccCC-----------------------------------------------------------ccccHHHHH
Confidence 999999876542 246999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.|.+++.. ..++++++++||.+.++..... .. ..+......+.. ..-+.+++|+|++
T Consensus 161 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~-----~~~~~~~~~~~~---------~~~~~~~~d~a~~ 223 (250)
T PRK07774 161 GLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV---TP-----KEFVADMVKGIP---------LSRMGTPEDLVGM 223 (250)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc---CC-----HHHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence 999998876 3479999999998877654211 11 011222222111 1124568999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... ...+++||+.++
T Consensus 224 ~~~~~~~~~~-~~~g~~~~v~~g 245 (250)
T PRK07774 224 CLFLLSDEAS-WITGQIFNVDGG 245 (250)
T ss_pred HHHHhChhhh-CcCCCEEEECCC
Confidence 9988864221 112689999887
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.8e-18 Score=156.09 Aligned_cols=216 Identities=12% Similarity=0.129 Sum_probs=147.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++++||||||+|+||+++++.|+++| ++|.++.|+..+... ...+. ....
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~~~~~~~~~~------------------------~~~~ 56 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAPLSQTLPGVP------------------------ADAL 56 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHhHHHHHHHHh------------------------hcCc
Confidence 3678999999999999999999999999 557888887643211 11111 1356
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++.+......+...+.+.++|+|||+|+.... .+.+...++.|+.++.++++++.+. .+.++|
T Consensus 57 ~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 136 (239)
T PRK12828 57 RIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRI 136 (239)
T ss_pred eEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEE
Confidence 778899996432111111111223468999999986432 2345667889999999998887542 357899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...++... ....|+.+|.+
T Consensus 137 v~~sS~~~~~~~~--------------------------------------------------------~~~~y~~sk~a 160 (239)
T PRK12828 137 VNIGAGAALKAGP--------------------------------------------------------GMGAYAAAKAG 160 (239)
T ss_pred EEECchHhccCCC--------------------------------------------------------CcchhHHHHHH
Confidence 9999997665321 12469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.. ..++++.++|||.++++.... . .+. .....+++++|+|+++
T Consensus 161 ~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~---------------------~---~~~--~~~~~~~~~~dva~~~ 214 (239)
T PRK12828 161 VARLTEALAAELLDRGITVNAVLPSIIDTPPNRA---------------------D---MPD--ADFSRWVTPEQIAAVI 214 (239)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh---------------------c---CCc--hhhhcCCCHHHHHHHH
Confidence 88888755 358999999999999864310 0 000 1122379999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++...... -.+..+++.++
T Consensus 215 ~~~l~~~~~~-~~g~~~~~~g~ 235 (239)
T PRK12828 215 AFLLSDEAQA-ITGASIPVDGG 235 (239)
T ss_pred HHHhCccccc-ccceEEEecCC
Confidence 9888642211 12678888776
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-18 Score=159.02 Aligned_cols=232 Identities=16% Similarity=0.111 Sum_probs=146.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||++++++|+++|+ +|.+++|+... ..+.+.+.+ .. .+.++.+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~---~V~~~~r~~~~--~~~~~~~~l---------~~---------~~~~~~~ 60 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGA---HVVVNYRQKAP--RANKVVAEI---------EA---------AGGRASA 60 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCchH--hHHHHHHHH---------Hh---------cCCceEE
Confidence 6789999999999999999999999994 56777886432 112222111 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAG 167 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~ 167 (399)
+.+|+++++......+.....+.++|+|||+|+.... ...+...+++|+.++.++++++.+. ....++|++||.....
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 140 (248)
T PRK07806 61 VGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHF 140 (248)
T ss_pred EEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhc
Confidence 9999996542111111111222468999999986432 2235566788999999999999874 2345899999864321
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
.... + +......|+.+|...|.+++.+
T Consensus 141 ~~~~---~------------------------------------------------~~~~~~~Y~~sK~a~e~~~~~l~~ 169 (248)
T PRK07806 141 IPTV---K------------------------------------------------TMPEYEPVARSKRAGEDALRALRP 169 (248)
T ss_pred Cccc---c------------------------------------------------CCccccHHHHHHHHHHHHHHHHHH
Confidence 1000 0 0011357999999999999876
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..++++++++|+.+-++.... . ..+...+ .+.........+++++|+|++++.++... ..
T Consensus 170 ~~~~~~i~v~~v~pg~~~~~~~~~---~----------~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~ 232 (248)
T PRK07806 170 ELAEKGIGFVVVSGDMIEGTVTAT---L----------LNRLNPG---AIEARREAAGKLYTVSEFAAEVARAVTAP-VP 232 (248)
T ss_pred HhhccCeEEEEeCCccccCchhhh---h----------hccCCHH---HHHHHHhhhcccCCHHHHHHHHHHHhhcc-cc
Confidence 357999999988776543210 0 0000000 00000011236899999999999999732 22
Q ss_pred CCCCcEEEecCC
Q 015874 323 PSDANIYHVGSS 334 (399)
Q Consensus 323 ~~~~~~yni~~~ 334 (399)
. +.+|+++++
T Consensus 233 ~--g~~~~i~~~ 242 (248)
T PRK07806 233 S--GHIEYVGGA 242 (248)
T ss_pred C--ccEEEecCc
Confidence 2 789999997
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=153.69 Aligned_cols=226 Identities=17% Similarity=0.170 Sum_probs=148.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++| +.|.++.|+..... ...+.+ . ..+.++.+
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~~---~~~~~~---------~---------~~~~~~~~ 58 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAAE---ALAAEL---------R---------AAGGEARV 58 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHHH---HHHHHH---------H---------hcCCceEE
Confidence 456899999999999999999999999 45688888764332 111111 0 01357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+..+|+|||+||.... .+.+...++.|+.+..++++.+.+. .+.++||+
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~ 138 (246)
T PRK05653 59 LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN 138 (246)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999996432111111111123457999999987543 1345677899999999999888542 25679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 139 ~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~~~~ 162 (246)
T PRK05653 139 ISSVSGVTGN--------------------------------------------------------PGQTNYSAAKAGVI 162 (246)
T ss_pred ECcHHhccCC--------------------------------------------------------CCCcHhHhHHHHHH
Confidence 9987432210 22356999999998
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++||+.++++.... +.......... .+ ....+++.+|+|+++..
T Consensus 163 ~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----------~~~~~~~~~~~---~~-----~~~~~~~~~dva~~~~~ 224 (246)
T PRK05653 163 GFTKALALELASRGITVNAVAPGFIDTDMTEG----------LPEEVKAEILK---EI-----PLGRLGQPEEVANAVAF 224 (246)
T ss_pred HHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----------hhHHHHHHHHh---cC-----CCCCCcCHHHHHHHHHH
Confidence 888765 348999999999998865421 00111111100 11 12557889999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+++|+++++
T Consensus 225 ~~~~~~~-~~~g~~~~~~gg 243 (246)
T PRK05653 225 LASDAAS-YITGQVIPVNGG 243 (246)
T ss_pred HcCchhc-CccCCEEEeCCC
Confidence 8863222 112688999886
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=162.54 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=152.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||++++++|+++|++ |.+..|+.+.. ..+...+.+ .. .+.++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~i~~~~~~~~-~~~~~~~~~---------~~---------~~~~~~ 109 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGAD---IALNYLPEEEQ-DAAEVVQLI---------QA---------EGRKAV 109 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCE---EEEEeCCcchH-HHHHHHHHH---------HH---------cCCeEE
Confidence 367899999999999999999999999954 45555543321 111111111 00 134678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ....+||+
T Consensus 110 ~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~ 189 (300)
T PRK06128 110 ALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN 189 (300)
T ss_pred EEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence 89999997543222222222234579999999996421 2467888999999999999998763 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+.... ....|+.+|.+.+
T Consensus 190 ~sS~~~~~~~~--------------------------------------------------------~~~~Y~asK~a~~ 213 (300)
T PRK06128 190 TGSIQSYQPSP--------------------------------------------------------TLLDYASTKAAIV 213 (300)
T ss_pred ECCccccCCCC--------------------------------------------------------CchhHHHHHHHHH
Confidence 99988765321 1246999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..|+++++++||.|.++..... +. . ...+..... ......+...+|+|.+++.
T Consensus 214 ~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~-~-----~~~~~~~~~---------~~p~~r~~~p~dva~~~~~ 277 (300)
T PRK06128 214 AFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQ-P-----PEKIPDFGS---------ETPMKRPGQPVEMAPLYVL 277 (300)
T ss_pred HHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CC-C-----HHHHHHHhc---------CCCCCCCcCHHHHHHHHHH
Confidence 998876 3589999999999998754110 00 0 011111111 1112346688999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... --.+.+|++.++
T Consensus 278 l~s~~~~-~~~G~~~~v~gg 296 (300)
T PRK06128 278 LASQESS-YVTGEVFGVTGG 296 (300)
T ss_pred HhCcccc-CccCcEEeeCCC
Confidence 8763222 112678999887
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=156.38 Aligned_cols=226 Identities=18% Similarity=0.183 Sum_probs=148.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| .+|.++.|+.... .....+.+ .. ...++.++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~--~~~~~~~~---------~~---------~~~~~~~~~ 58 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEE--LAATQQEL---------RA---------LGVEVIFFP 58 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhH--HHHHHHHH---------Hh---------cCCceEEEE
Confidence 3789999999999999999999999 4567777764321 11111110 00 124688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc----cC-----
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC----VK----- 153 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~----~~----- 153 (399)
+|+++++...+..+...+....+|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 59 ADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 99997543222222222223578999999987431 2556778999999999999887552 11
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 139 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 162 (256)
T PRK12745 139 HRSIVFVSSVNAIMVS--------------------------------------------------------PNRGEYCI 162 (256)
T ss_pred CcEEEEECChhhccCC--------------------------------------------------------CCCcccHH
Confidence 4579999997654321 12357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|.+.|.+++.+ ..+++++++|||.+.++.... +.. .+......+. .....+.+.+|+
T Consensus 163 sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~~------~~~~~~~~~~--------~~~~~~~~~~d~ 225 (256)
T PRK12745 163 SKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP---VTA------KYDALIAKGL--------VPMPRWGEPEDV 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc---cch------hHHhhhhhcC--------CCcCCCcCHHHH
Confidence 999999998876 368999999999998865421 111 1111111110 113457799999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+++..++... .....+.+|++.++
T Consensus 226 a~~i~~l~~~~-~~~~~G~~~~i~gg 250 (256)
T PRK12745 226 ARAVAALASGD-LPYSTGQAIHVDGG 250 (256)
T ss_pred HHHHHHHhCCc-ccccCCCEEEECCC
Confidence 99999887532 22223689999886
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=169.33 Aligned_cols=246 Identities=16% Similarity=0.133 Sum_probs=158.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+...|++||||||+|+||++++++|+++| ++|.+++|+.++...+ .+++.+.. +... + .....++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl~~l---~~~l~~~~----L~~~-G----a~~~~~v 140 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRAESL---VQSVKQMK----LDVE-G----TQPVEKL 140 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHH---HHHhhhhc----cccc-c----ccccCce
Confidence 44678999999999999999999999999 5568888886543221 11110000 0000 0 0012468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+++.+|++ +.+.+...++++|+|||+||..... ..+...+++|+.++.++++++++. ++++||++||++++
T Consensus 141 ~iV~gDLt-------D~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~ 212 (576)
T PLN03209 141 EIVECDLE-------KPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTN 212 (576)
T ss_pred EEEEecCC-------CHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhc
Confidence 89999999 4455557788999999999875321 235566889999999999999986 78999999998763
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
.... ....+ .....|...|..+|..+..
T Consensus 213 ~~g~---p~~~~-----------------------------------------------~sk~~~~~~KraaE~~L~~-- 240 (576)
T PLN03209 213 KVGF---PAAIL-----------------------------------------------NLFWGVLCWKRKAEEALIA-- 240 (576)
T ss_pred ccCc---cccch-----------------------------------------------hhHHHHHHHHHHHHHHHHH--
Confidence 2110 00000 1123577888888988876
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.|++++++|||.+.++..+.. .. +.......+ ......+.-+|||++++.++....... +
T Consensus 241 sGIrvTIVRPG~L~tp~d~~~----~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~as~--~ 300 (576)
T PLN03209 241 SGLPYTIVRPGGMERPTDAYK----ET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRLSY--C 300 (576)
T ss_pred cCCCEEEEECCeecCCccccc----cc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCchhcc--c
Confidence 699999999999987644210 00 000000111 111234788999999999886333222 6
Q ss_pred cEEEecCCCCCc-ccHHHHHHHH
Q 015874 327 NIYHVGSSLRNP-VTLVSILDYG 348 (399)
Q Consensus 327 ~~yni~~~~~~~-~s~~el~~~l 348 (399)
++|.+.++...+ ..+.++++.+
T Consensus 301 kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 301 KVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred eEEEEEeCCCCCCCCHHHHHHhc
Confidence 889998863222 3455555443
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=158.20 Aligned_cols=219 Identities=13% Similarity=0.066 Sum_probs=139.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||+|+||++++++|+++| ++|.+++|+.+.. +.+.+ . ...++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~l~~-------------~--------~~~~~~~~ 55 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEAAR---ADFEA-------------L--------HPDRALAR 55 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHHHH---HHHHh-------------h--------cCCCeeEE
Confidence 46889999999999999999999999 5678888875432 11111 0 12467889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||++
T Consensus 56 ~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 135 (277)
T PRK06180 56 LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI 135 (277)
T ss_pred EccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 999996543111111111222468999999997532 1346677999999999999986542 245689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.+.+... .+...|+.+|...|.
T Consensus 136 SS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 159 (277)
T PRK06180 136 TSMGGLITM--------------------------------------------------------PGIGYYCGSKFALEG 159 (277)
T ss_pred ecccccCCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 997654321 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+++.+ ..+++++++|||.+.++..... .............+...... .... ....+...+|+|++++.
T Consensus 160 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~dva~~~~~ 233 (277)
T PRK06180 160 ISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQA---REAK---SGKQPGDPAKAAQAILA 233 (277)
T ss_pred HHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHH---HHhh---ccCCCCCHHHHHHHHHH
Confidence 88765 2489999999999987643211 00000101001111111000 0001 12235678999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
++..
T Consensus 234 ~l~~ 237 (277)
T PRK06180 234 AVES 237 (277)
T ss_pred HHcC
Confidence 9874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=157.20 Aligned_cols=238 Identities=13% Similarity=0.069 Sum_probs=155.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++++||||||+||+++++.|+++| .+|.++.|+.... +.+.+.+ ...++.++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~~~---~~~~~~~--------------------~~~~~~~~~ 55 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAAAL---AAFADAL--------------------GDARFVPVA 55 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh--------------------cCCceEEEE
Confidence 5789999999999999999999999 5568888865432 1111111 124688899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+|+.+++......+.....+.++|+|||+||.... .+.+...+++|+.+..++++++... .+..+|+++|
T Consensus 56 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (257)
T PRK07074 56 CDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIG 135 (257)
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 99996432111111111112358999999987532 1334556788999999999887432 2457899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....... . ...|+.+|++.+.+
T Consensus 136 S~~~~~~~--------------------------------------------------------~-~~~y~~sK~a~~~~ 158 (257)
T PRK07074 136 SVNGMAAL--------------------------------------------------------G-HPAYSAAKAGLIHY 158 (257)
T ss_pred chhhcCCC--------------------------------------------------------C-CcccHHHHHHHHHH
Confidence 86432210 0 13599999999998
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++.+ ..+++++++|||.+.++...... .....+...... .....++++++|++++++.++
T Consensus 159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARV------AANPQVFEELKK---------WYPLQDFATPDDVANAVLFLA 223 (257)
T ss_pred HHHHHHHHhHhCeEEEEEEeCcCCcchhhccc------ccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHc
Confidence 8876 34799999999999876431100 000011111111 112468999999999999999
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHH
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFV 350 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~ 350 (399)
.... ....+.++++.++ ...+..|+.+.+.+
T Consensus 224 ~~~~-~~~~g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 224 SPAA-RAITGVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred Cchh-cCcCCcEEEeCCC--cCcCChhhhhhhcc
Confidence 6322 2222678889888 66889999887754
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=156.10 Aligned_cols=229 Identities=14% Similarity=0.082 Sum_probs=146.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||++++++|+++|+ +|.+.+|+.... ..... ..++. .+.++.+
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~---~v~~~~~~~~~~--~~~~~---------~~~~~---------~~~~~~~ 60 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS---LVVVNAKKRAEE--MNETL---------KMVKE---------NGGEGIG 60 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCChHH--HHHHH---------HHHHH---------cCCeeEE
Confidence 4578999999999999999999999995 445556543211 11100 00110 0235678
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.+..++++++.+. ....+||++|
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 140 (252)
T PRK06077 61 VLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA 140 (252)
T ss_pred EEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence 8999996542111111111223478999999996432 1234667899999999999988764 2346899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .+.+.|+.+|...|.+
T Consensus 141 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 164 (252)
T PRK06077 141 SVAGIRPA--------------------------------------------------------YGLSIYGAMKAAVINL 164 (252)
T ss_pred chhccCCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 98765421 2235799999999999
Q ss_pred HHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 242 MQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 242 l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
++.+ ..++.+.+++||.|.++.......+... ...... ........+++++|+|++++.++.
T Consensus 165 ~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~~~~dva~~~~~~~~ 230 (252)
T PRK06077 165 TKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGM------SEKEFA--------EKFTLMGKILDPEEVAEFVAAILK 230 (252)
T ss_pred HHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccc------cHHHHH--------HhcCcCCCCCCHHHHHHHHHHHhC
Confidence 9876 2379999999999987643111100000 000000 001123468999999999999996
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
.. .. .++.|++.++
T Consensus 231 ~~-~~--~g~~~~i~~g 244 (252)
T PRK06077 231 IE-SI--TGQVFVLDSG 244 (252)
T ss_pred cc-cc--CCCeEEecCC
Confidence 32 22 2678999887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-17 Score=154.64 Aligned_cols=232 Identities=15% Similarity=0.158 Sum_probs=148.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||++++++|+++| ..|.++.|+.+... +..+++ .. .+.++.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~~~---~~~~~~---------~~---------~~~~~~~ 56 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREAAE---KVAADI---------RA---------KGGNAQA 56 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHHHH---HHHHHH---------Hh---------cCCcEEE
Confidence 468999999999999999999999999 45678877754322 111111 00 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.......++|+|||+|+.... .+.++..+++|+.+..++++++.+. .+.+++++
T Consensus 57 ~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 136 (250)
T TIGR03206 57 FACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVN 136 (250)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9999996432111111111122468999999986431 2345667999999999998887532 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+.+.... ....|+.+|++.+
T Consensus 137 iss~~~~~~~~--------------------------------------------------------~~~~Y~~sK~a~~ 160 (250)
T TIGR03206 137 IASDAARVGSS--------------------------------------------------------GEAVYAACKGGLV 160 (250)
T ss_pred ECchhhccCCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99987665321 1346999999998
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++|||.++++......+.... ...+...... .. ....+...+|+|+++..
T Consensus 161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~--------~~~~~~~~~dva~~~~~ 228 (250)
T TIGR03206 161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAEN---PEKLREAFTR-AI--------PLGRLGQPDDLPGAILF 228 (250)
T ss_pred HHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCC---hHHHHHHHHh-cC--------CccCCcCHHHHHHHHHH
Confidence 888766 3489999999999988653211111100 0011111111 11 11234567899999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+.++++.++
T Consensus 229 l~~~~~~-~~~g~~~~~~~g 247 (250)
T TIGR03206 229 FSSDDAS-FITGQVLSVSGG 247 (250)
T ss_pred HcCcccC-CCcCcEEEeCCC
Confidence 8863322 212678888765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.7e-18 Score=158.22 Aligned_cols=236 Identities=17% Similarity=0.191 Sum_probs=149.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
++.+|+||||||+|+||+++++.|+++|+ +|.++.|+.... +...+++. . .+.++.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~~~~---------~---------~~~~~~ 57 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAERL---DEVAAEID---------D---------LGRRAL 57 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHHHH---HHHHHHHH---------H---------hCCceE
Confidence 57789999999999999999999999994 568888865332 22222110 0 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+|+.... .+.++..++.|+.++..+++++.+. +...+||
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii 137 (258)
T PRK07890 58 AVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIV 137 (258)
T ss_pred EEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEE
Confidence 99999996442111111111223578999999986421 2556778999999999999998753 2335899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 138 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 161 (258)
T PRK07890 138 MINSMVLRHSQ--------------------------------------------------------PKYGAYKMAKGAL 161 (258)
T ss_pred EEechhhccCC--------------------------------------------------------CCcchhHHHHHHH
Confidence 99998643321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+++.+ ..+++++++|||.++++..... ....... .....+...... ......+.+++|+|++
T Consensus 162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~a 232 (258)
T PRK07890 162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA---------NSDLKRLPTDDEVASA 232 (258)
T ss_pred HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh---------cCCccccCCHHHHHHH
Confidence 9998876 3489999999999999754211 0000000 000011111110 0112346788999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.++++.+.++
T Consensus 233 ~~~l~~~~~~-~~~G~~i~~~gg 254 (258)
T PRK07890 233 VLFLASDLAR-AITGQTLDVNCG 254 (258)
T ss_pred HHHHcCHhhh-CccCcEEEeCCc
Confidence 9888863221 111556666554
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=155.54 Aligned_cols=226 Identities=14% Similarity=0.111 Sum_probs=146.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||++++++|+++|++ |.+..|+... ..+.+.+.+ +. .+.++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~~l---------~~---------~~~~~~~ 60 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAK---VVINYNSSKE--AAENLVNEL---------GK---------EGHDVYA 60 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEcCCcHH--HHHHHHHHH---------Hh---------cCCeEEE
Confidence 56899999999999999999999999954 4554443221 111221111 10 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+..+|+|||+|+.... .+.++..+++|+.++..+++++.+. .+..++|+
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (247)
T PRK12935 61 VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS 140 (247)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 9999996432111111111122458999999997532 2567778999999999999988753 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|.+.+
T Consensus 141 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 164 (247)
T PRK12935 141 ISSIIGQAGG--------------------------------------------------------FGQTNYSAAKAGML 164 (247)
T ss_pred EcchhhcCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9996443211 11357999999998
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..++++++++||.|.++..... .. ........ ......+++++|++++++.
T Consensus 165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~------~~~~~~~~---------~~~~~~~~~~edva~~~~~ 226 (247)
T PRK12935 165 GFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PE------EVRQKIVA---------KIPKKRFGQADEIAKGVVY 226 (247)
T ss_pred HHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cH------HHHHHHHH---------hCCCCCCcCHHHHHHHHHH
Confidence 887665 3589999999999876432110 00 01111111 1123568999999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... .++.||+.++
T Consensus 227 ~~~~~~~~--~g~~~~i~~g 244 (247)
T PRK12935 227 LCRDGAYI--TGQQLNINGG 244 (247)
T ss_pred HcCcccCc--cCCEEEeCCC
Confidence 88632112 2689999886
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=156.85 Aligned_cols=238 Identities=14% Similarity=0.110 Sum_probs=149.4
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|...+++++||||||+|+||++++++|+++| ++|.++.|+.... +.+.+.. + ..
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~~---~~~~~~~-------------~-------~~ 58 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAAL---AATAARL-------------P-------GA 58 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH-------------h-------cC
Confidence 5566889999999999999999999999999 4568888865432 1111111 0 12
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
++.++.+|+++++......+.....+.++|+|||+||.... .+.+...+++|+.++.++++++.+. .+.
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 138 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH 138 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 56889999996442111111121223579999999997511 2456778999999999999887442 233
Q ss_pred -ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 155 -KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 155 -~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
++|+++||....... +....|+.
T Consensus 139 ~~~vv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 162 (264)
T PRK12829 139 GGVIIALSSVAGRLGY--------------------------------------------------------PGRTPYAA 162 (264)
T ss_pred CeEEEEecccccccCC--------------------------------------------------------CCCchhHH
Confidence 567887775432110 11246999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCc-ccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
+|...|.+++.. ..+++++++|||.++|+........ ...... .......+ .+ .......+++++|
T Consensus 163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~--~~~~~~~~~~~~d 234 (264)
T PRK12829 163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGI---GLDEMEQE---YL--EKISLGRMVEPED 234 (264)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCC---ChhHHHHH---HH--hcCCCCCCCCHHH
Confidence 999999998776 3489999999999998764211000 000000 00000000 00 0012345899999
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+++..++.... ....+..|+++++
T Consensus 235 ~a~~~~~l~~~~~-~~~~g~~~~i~~g 260 (264)
T PRK12829 235 IAATALFLASPAA-RYITGQAISVDGN 260 (264)
T ss_pred HHHHHHHHcCccc-cCccCcEEEeCCC
Confidence 9999988875321 1112678999887
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=153.87 Aligned_cols=231 Identities=14% Similarity=0.169 Sum_probs=147.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||++++++|+++| ++|.++.|+.+... ...+++ . .+.++.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~~---~~~~~~---------~----------~~~~~~~ 57 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAEAAE---RVAAAI---------A----------AGGRAFA 57 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHHHHH---HHHHHH---------h----------cCCeEEE
Confidence 568999999999999999999999999 45688888754321 111111 0 1356889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+++|+++++......+...+.+.++|+|||+|+.... .+.++..+++|+.++.++.+.+.+. .+.++|++
T Consensus 58 ~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 137 (252)
T PRK06138 58 RQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVN 137 (252)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEE
Confidence 9999996443111111111123479999999997532 2446667899999998887766431 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..... .....|+.+|.+.+
T Consensus 138 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 161 (252)
T PRK06138 138 TASQLALAGG--------------------------------------------------------RGRAAYVASKGAIA 161 (252)
T ss_pred ECChhhccCC--------------------------------------------------------CCccHHHHHHHHHH
Confidence 9997543211 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++|||.++++........... ...+..... .......+++.+|+|++++.
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~----~~~~~~~~~--------~~~~~~~~~~~~d~a~~~~~ 229 (252)
T PRK06138 162 SLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD----PEALREALR--------ARHPMNRFGTAEEVAQAALF 229 (252)
T ss_pred HHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC----hHHHHHHHH--------hcCCCCCCcCHHHHHHHHHH
Confidence 998876 3489999999999988754211110000 000111110 01112247889999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... ...+..+.+.++
T Consensus 230 l~~~~~~-~~~g~~~~~~~g 248 (252)
T PRK06138 230 LASDESS-FATGTTLVVDGG 248 (252)
T ss_pred HcCchhc-CccCCEEEECCC
Confidence 8864332 212566777654
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=153.37 Aligned_cols=239 Identities=18% Similarity=0.241 Sum_probs=175.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+..|-.+-|.|||||+|+.++.+|.+.| ..|.+--|..+..-...++.-+ ...+
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~r~lkvmGd----------------------LGQv 111 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDPRHLKVMGD----------------------LGQV 111 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccchhheeeccc----------------------ccce
Confidence 45667788999999999999999999999 5667777765443222222111 2577
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
-++.-|+. |++.+.+..+...+|||+.|---...+++ +.+.|+.+...|...|++. ++.+|||+|+.++.-
T Consensus 112 l~~~fd~~-------DedSIr~vvk~sNVVINLIGrd~eTknf~-f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv 182 (391)
T KOG2865|consen 112 LFMKFDLR-------DEDSIRAVVKHSNVVINLIGRDYETKNFS-FEDVNVHIAERLARICKEA-GVERFIHVSCLGANV 182 (391)
T ss_pred eeeccCCC-------CHHHHHHHHHhCcEEEEeeccccccCCcc-cccccchHHHHHHHHHHhh-Chhheeehhhccccc
Confidence 88889988 77888888899999999988532223322 2567999999999999997 999999999886221
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
..++-|-.+|+++|..++....
T Consensus 183 ----------------------------------------------------------~s~Sr~LrsK~~gE~aVrdafP 204 (391)
T KOG2865|consen 183 ----------------------------------------------------------KSPSRMLRSKAAGEEAVRDAFP 204 (391)
T ss_pred ----------------------------------------------------------cChHHHHHhhhhhHHHHHhhCC
Confidence 2246689999999999998632
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh-cCccccccCCC-ccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGET-KVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
..+|+||+.|||..++ .++.+...+. -|-+ .+++.| +..-..++|.|||.+|+.++.++ .+.
T Consensus 205 --eAtIirPa~iyG~eDr----------fln~ya~~~rk~~~~-pL~~~GekT~K~PVyV~DVaa~IvnAvkDp-~s~-- 268 (391)
T KOG2865|consen 205 --EATIIRPADIYGTEDR----------FLNYYASFWRKFGFL-PLIGKGEKTVKQPVYVVDVAAAIVNAVKDP-DSM-- 268 (391)
T ss_pred --cceeechhhhcccchh----------HHHHHHHHHHhcCce-eeecCCcceeeccEEEehHHHHHHHhccCc-ccc--
Confidence 4699999999998872 1222222222 2222 333333 56778999999999999999843 333
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++|..+++ ....+.|+++.+-+...+-+
T Consensus 269 Gktye~vGP--~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 269 GKTYEFVGP--DRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred CceeeecCC--chhhHHHHHHHHHHHHhhcc
Confidence 799999999 66899999999988876533
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-17 Score=153.35 Aligned_cols=233 Identities=13% Similarity=0.186 Sum_probs=148.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++|++|+||||+|+||++++++|++.|. +|.+++|+.......+.+.+ .+.++.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~----------------------~~~~~~ 58 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGA---IPVIFGRSAPDDEFAEELRA----------------------LQPRAE 58 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCC---cEEEEcCChhhHHHHHHHHh----------------------cCCceE
Confidence 37889999999999999999999999994 45777787643311111110 125688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
++.+|+++++......+.....+..+|+|||+||.... .+.++..++.|+.+..++.+.+.+. ....+|+++
T Consensus 59 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (258)
T PRK08628 59 FVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI 138 (258)
T ss_pred EEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence 99999996542111111111122468999999996421 1456778999999999999887652 234689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||....... .....|+.+|...+.
T Consensus 139 ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 162 (258)
T PRK08628 139 SSKTALTGQ--------------------------------------------------------GGTSGYAAAKGAQLA 162 (258)
T ss_pred CCHHhccCC--------------------------------------------------------CCCchhHHHHHHHHH
Confidence 987544311 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.. ..+++++.++||.|+++.... +................ .++. ...++..+|+|++++.+
T Consensus 163 ~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~dva~~~~~l 231 (258)
T PRK08628 163 LTREWAVALAKDGVRVNAVIPAEVMTPLYEN---WIATFDDPEAKLAAITA----KIPL----GHRMTTAEEIADTAVFL 231 (258)
T ss_pred HHHHHHHHHhhcCeEEEEEecCccCCHHHHH---HhhhccCHHHHHHHHHh----cCCc----cccCCCHHHHHHHHHHH
Confidence 99876 358999999999999864311 11110000001111110 0110 12467889999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+...... ..+..+.+.++
T Consensus 232 ~~~~~~~-~~g~~~~~~gg 249 (258)
T PRK08628 232 LSERSSH-TTGQWLFVDGG 249 (258)
T ss_pred hChhhcc-ccCceEEecCC
Confidence 8743222 12567777654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-17 Score=156.56 Aligned_cols=174 Identities=16% Similarity=0.094 Sum_probs=116.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++||||||+|+||++++++|+++| ++|.++.|+.+.. ++..+++. . .+.++.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~---------~---------~~~~~~ 58 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDAL---DRAVAELR---------A---------QGAEVL 58 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHHHH---------h---------cCCeEE
Confidence 3568999999999999999999999999 4567777764322 22221110 0 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC----
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL---- 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~---- 154 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ...
T Consensus 59 ~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~ 138 (287)
T PRK06194 59 GVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPA 138 (287)
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCC
Confidence 89999996432111111111122368999999998642 2456677899999999988875432 122
Q ss_pred --ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 155 --KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 155 --~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
.++|++||.+.+... .....|+
T Consensus 139 ~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 162 (287)
T PRK06194 139 YEGHIVNTASMAGLLAP--------------------------------------------------------PAMGIYN 162 (287)
T ss_pred CCeEEEEeCChhhccCC--------------------------------------------------------CCCcchH
Confidence 589999998665432 1135699
Q ss_pred HhHHHHHHHHHHh--h-----CCCcEEEEecCceecC
Q 015874 233 FTKTMGEMLMQQS--K-----ENLSLVIIRPTVVSGT 262 (399)
Q Consensus 233 ~sK~~~E~~l~~~--~-----~~~~~~i~Rp~~V~G~ 262 (399)
.+|.+.+.+++.+ + .++++..+.||.|...
T Consensus 163 ~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~ 199 (287)
T PRK06194 163 VSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG 199 (287)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence 9999999998865 1 2466777777766443
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-17 Score=153.67 Aligned_cols=235 Identities=12% Similarity=0.070 Sum_probs=148.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+||||+|+||+++++.|+++| ++|.++.|+..... ...+.+ .... ...+++++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~~~---~~~~~~---------~~~~-------~~~~~~~~~ 59 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEKAA---NVAQEI---------NAEY-------GEGMAYGFG 59 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHH---------HHhc-------CCceeEEEE
Confidence 5789999999999999999999999 45677777654321 111111 1110 013688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~v~~ 160 (399)
+|+++++......+.....+..+|+|||+||.... .+.++..+++|+.++..+++++.+. ++ ..++|++
T Consensus 60 ~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ 139 (259)
T PRK12384 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI 139 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 99996432111111111223568999999986532 2456778899999999888877652 23 3589999
Q ss_pred ecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 161 STAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 161 SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
||.. .++. .....|+.+|++.+
T Consensus 140 ss~~~~~~~---------------------------------------------------------~~~~~Y~~sKaa~~ 162 (259)
T PRK12384 140 NSKSGKVGS---------------------------------------------------------KHNSGYSAAKFGGV 162 (259)
T ss_pred cCcccccCC---------------------------------------------------------CCCchhHHHHHHHH
Confidence 8864 2221 11246999999998
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh--cCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA--QGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+++.+ ..|+++.++|||.++++.... .. +..+..... .+.......+......+++.+|+++++
T Consensus 163 ~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~ 234 (259)
T PRK12384 163 GLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SL------LPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNML 234 (259)
T ss_pred HHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hh------hHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence 888765 468999999999987654310 00 011111100 001111112223456789999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... ..-.+..|++.++
T Consensus 235 ~~l~~~~~-~~~~G~~~~v~~g 255 (259)
T PRK12384 235 LFYASPKA-SYCTGQSINVTGG 255 (259)
T ss_pred HHHcCccc-ccccCceEEEcCC
Confidence 98876322 2123678999887
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-17 Score=151.17 Aligned_cols=229 Identities=17% Similarity=0.137 Sum_probs=148.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||++++++|+++| ++|.+++|+....... .+.+ . . +.++.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~~~~~---~~~~---------~--------~--~~~~~~ 57 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEAAERV---AAEI---------L--------A--GGRAIA 57 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH---HHHH---------h--------c--CCeEEE
Confidence 578899999999999999999999999 5578889986432211 1111 0 0 246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+.......++|+|||+|+.... .+.++..+++|+.++.++++.+.+. .+.++||
T Consensus 58 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 137 (251)
T PRK07231 58 VAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIV 137 (251)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999996432111111111122468999999987421 2456778999999998888877652 3567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+.... ....|+.+|...
T Consensus 138 ~~sS~~~~~~~~--------------------------------------------------------~~~~y~~sk~~~ 161 (251)
T PRK07231 138 NVASTAGLRPRP--------------------------------------------------------GLGWYNASKGAV 161 (251)
T ss_pred EEcChhhcCCCC--------------------------------------------------------CchHHHHHHHHH
Confidence 999987665321 135699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++.++||.+.++..... ... .. ......... ......+++++|+|.+++
T Consensus 162 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~-~~-~~~~~~~~~---------~~~~~~~~~~~dva~~~~ 227 (251)
T PRK07231 162 ITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF---MGE-PT-PENRAKFLA---------TIPLGRLGTPEDIANAAL 227 (251)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh---hcc-cC-hHHHHHHhc---------CCCCCCCcCHHHHHHHHH
Confidence 9888766 3389999999999966543110 000 00 000111111 112335789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++....... .+..+.+.++
T Consensus 228 ~l~~~~~~~~-~g~~~~~~gg 247 (251)
T PRK07231 228 FLASDEASWI-TGVTLVVDGG 247 (251)
T ss_pred HHhCccccCC-CCCeEEECCC
Confidence 9886332211 2566777665
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.3e-17 Score=154.97 Aligned_cols=236 Identities=18% Similarity=0.208 Sum_probs=146.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+++||||+|+||++++++|+++| ++|.++.|+.... ++..+++ + ...++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~~---~~~~~~~-------------~------~~~~~ 68 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDLG---QNVCDSL-------------G------GEPNV 68 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHh-------------c------CCCce
Confidence 45778999999999999999999999999 4567777754321 1111111 0 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
.++++|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ++..
T Consensus 69 ~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 148 (280)
T PLN02253 69 CFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG 148 (280)
T ss_pred EEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc
Confidence 899999996543211112222223479999999997531 2456788999999999999877642 1345
Q ss_pred eEEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 156 VFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 156 ~~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
+++++||... ++. .....|+.+
T Consensus 149 ~ii~isS~~~~~~~---------------------------------------------------------~~~~~Y~~s 171 (280)
T PLN02253 149 SIVSLCSVASAIGG---------------------------------------------------------LGPHAYTGS 171 (280)
T ss_pred eEEEecChhhcccC---------------------------------------------------------CCCcccHHH
Confidence 7888877643 221 113469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCC-CCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
|.+.|.+++.+ ..++++..++||.|.++.... .+. . ......+..... ............++.+|+
T Consensus 172 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~l~~~~~~~~dv 243 (280)
T PLN02253 172 KHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRA----FAGKNANLKGVELTVDDV 243 (280)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccc---c-cchhhhhhhhHH----HhhcCCCCcCCCCCHHHH
Confidence 99999999876 358999999999998764311 010 0 000001100000 000000001234689999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+..+++.++
T Consensus 244 a~~~~~l~s~~~~-~i~G~~i~vdgG 268 (280)
T PLN02253 244 ANAVLFLASDEAR-YISGLNLMIDGG 268 (280)
T ss_pred HHHHHhhcCcccc-cccCcEEEECCc
Confidence 9999998863221 112577888776
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=152.96 Aligned_cols=234 Identities=15% Similarity=0.135 Sum_probs=143.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|..+.|+.+... ...+.+ .... ....+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~~---~~~~~l---------~~~~-------~~~~~~~ 59 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEALN---ELLESL---------GKEF-------KSKKLSL 59 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHHHH---HHHHHH---------Hhhc-------CCCceeE
Confidence 578999999999999999999999999 45677777754321 111111 0000 1235677
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.+|+++++......+.....+..+|+|||+|+.... .+.+...+++|+.+...+++++.+. .+..+
T Consensus 60 ~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T PRK09186 60 VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN 139 (256)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence 8999997543211112111222458999999975321 1346677888998888877766542 24579
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||.+.+........+. .+...+..|+.+|.
T Consensus 140 iv~~sS~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~Y~~sK~ 173 (256)
T PRK09186 140 LVNISSIYGVVAPKFEIYEG----------------------------------------------TSMTSPVEYAAIKA 173 (256)
T ss_pred EEEEechhhhccccchhccc----------------------------------------------cccCCcchhHHHHH
Confidence 99999976443211100000 00122346999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.. ..++++++++||.+++... . .+...... . . ....+++.+|+|++
T Consensus 174 a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~------~~~~~~~~-~---~-----~~~~~~~~~dva~~ 231 (256)
T PRK09186 174 GIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------E------AFLNAYKK-C---C-----NGKGMLDPDDICGT 231 (256)
T ss_pred HHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------H------HHHHHHHh-c---C-----CccCCCCHHHhhhh
Confidence 999998755 3579999999998875321 0 11111111 0 0 12346899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... ...+..+.+.++
T Consensus 232 ~~~l~~~~~~-~~~g~~~~~~~g 253 (256)
T PRK09186 232 LVFLLSDQSK-YITGQNIIVDDG 253 (256)
T ss_pred Hhheeccccc-cccCceEEecCC
Confidence 9999863322 112567777665
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=149.61 Aligned_cols=216 Identities=15% Similarity=0.158 Sum_probs=147.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++++||||+|+||+++++.|+++| ++|.++.|+.++. +.+.+. .+..+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~~~---~~~~~~-----------------------~~~~~ 57 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAAAL---DRLAGE-----------------------TGCEP 57 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH-----------------------hCCeE
Confidence 678999999999999999999999999 4568888875322 111110 13567
Q ss_pred EeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--c--CCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V--KLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~--~~~ 155 (399)
+.+|++++ +.+...+ .++|+|||+|+.... .+.++..++.|+.++.++++++.+. + ...
T Consensus 58 ~~~D~~~~-------~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 58 LRLDVGDD-------AAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEecCCCH-------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 88999953 2222333 358999999997532 2456677889999999999988763 1 136
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 131 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 154 (245)
T PRK07060 131 SIVNVSSQAALVGL--------------------------------------------------------PDHLAYCASK 154 (245)
T ss_pred EEEEEccHHHcCCC--------------------------------------------------------CCCcHhHHHH
Confidence 89999998655421 1135799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...|.+++.+ ..+++++.+|||.+.++.... .|... ........ . .....+++.+|+|+
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~-----~~~~~~~~----~-----~~~~~~~~~~d~a~ 218 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE--AWSDP-----QKSGPMLA----A-----IPLGRFAEVDDVAA 218 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh--hccCH-----HHHHHHHh----c-----CCCCCCCCHHHHHH
Confidence 9999988766 347999999999998875411 01110 00111111 0 11345889999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++.... ....+.++++.++
T Consensus 219 ~~~~l~~~~~-~~~~G~~~~~~~g 241 (245)
T PRK07060 219 PILFLLSDAA-SMVSGVSLPVDGG 241 (245)
T ss_pred HHHHHcCccc-CCccCcEEeECCC
Confidence 9999886432 2223678888775
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.9e-17 Score=153.83 Aligned_cols=230 Identities=16% Similarity=0.118 Sum_probs=141.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||++++++|+++| ++|.++.|+.+.. +... ..++++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~l---~~~~------------------------~~~~~~ 50 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRVDKM---EDLA------------------------SLGVHP 50 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH------------------------hCCCeE
Confidence 357899999999999999999999999 5568888875432 1111 135788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+...++|+|||+||.... .+.++..+++|+.++..+++.+.+. .+..++|+
T Consensus 51 ~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~ 130 (273)
T PRK06182 51 LSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIIN 130 (273)
T ss_pred EEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996432111111111122479999999997542 2456778899999976666654331 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..... .....|+.+|.+.+
T Consensus 131 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~~ 154 (273)
T PRK06182 131 ISSMGGKIYT--------------------------------------------------------PLGAWYHATKFALE 154 (273)
T ss_pred EcchhhcCCC--------------------------------------------------------CCccHhHHHHHHHH
Confidence 9997532211 11246999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCC-CcccCc--chHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDL--KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.. ..+++++++|||.|.++...... ...... ............ .+ ........+...+|+|++
T Consensus 155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~vA~~ 229 (273)
T PRK06182 155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA----SM-RSTYGSGRLSDPSVIADA 229 (273)
T ss_pred HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH----HH-HHhhccccCCCHHHHHHH
Confidence 987644 45899999999999876431000 000000 000000000000 00 011123456799999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... ...|+++.+
T Consensus 230 i~~~~~~~~~----~~~~~~g~~ 248 (273)
T PRK06182 230 ISKAVTARRP----KTRYAVGFG 248 (273)
T ss_pred HHHHHhCCCC----CceeecCcc
Confidence 9999874322 245777664
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-17 Score=153.32 Aligned_cols=225 Identities=12% Similarity=0.085 Sum_probs=144.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||++++++|+++| .+|.++.|+..+.. ...+. ...++.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~~~---~~~~~---------------------~~~~~~ 59 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRERGS---KVAKA---------------------LGENAW 59 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHHHH---HHHHH---------------------cCCceE
Confidence 4678999999999999999999999999 45677766543221 11110 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~ 157 (399)
++.+|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++++.+. ....++
T Consensus 60 ~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~i 139 (255)
T PRK05717 60 FIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAI 139 (255)
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEE
Confidence 89999997542111111111223468999999997532 1346778999999999999998752 234678
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... ...+.|+.+|.+
T Consensus 140 i~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa 163 (255)
T PRK05717 140 VNLASTRARQSE--------------------------------------------------------PDTEAYAASKGG 163 (255)
T ss_pred EEEcchhhcCCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999887543321 112569999999
Q ss_pred HHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 238 GEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 238 ~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+.+++.+ ..++++.+++||.+.++..... . . . . ........ . ....+.+.+|+|.++.
T Consensus 164 ~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~-~--~---~-~~~~~~~~---~-----~~~~~~~~~~va~~~~ 226 (255)
T PRK05717 164 LLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--R-A--E---P-LSEADHAQ---H-----PAGRVGTVEDVAAMVA 226 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--c-c--h---H-HHHHHhhc---C-----CCCCCcCHHHHHHHHH
Confidence 99988866 2359999999999988643110 0 0 0 0 11100100 0 1123568899999998
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+.+.++
T Consensus 227 ~l~~~~~~-~~~g~~~~~~gg 246 (255)
T PRK05717 227 WLLSRQAG-FVTGQEFVVDGG 246 (255)
T ss_pred HHcCchhc-CccCcEEEECCC
Confidence 88753222 112567777665
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=148.74 Aligned_cols=227 Identities=13% Similarity=0.097 Sum_probs=145.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+|+||||+|+||+++++.|+++|++ |.++.|.... ....+.+.+++ .. .+.++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~~~-------------~~-----~~~~~~ 62 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD---VIVLDIHPMRGRAEADAVAAGI-------------EA-----AGGKAL 62 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEcCcccccHHHHHHHHHHH-------------Hh-----cCCcEE
Confidence 56799999999999999999999999954 5666554321 11112111111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH-hc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~-~~---~~~~~~ 157 (399)
++.+|+++++......+.......++|+|||+||.... .+.+...+++|+.++.++++++. .. .+.++|
T Consensus 63 ~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 142 (249)
T PRK12827 63 GLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRI 142 (249)
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEE
Confidence 99999996432111111111122468999999997541 24467778999999999999987 21 255789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 143 v~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK~a 166 (249)
T PRK12827 143 VNIASVAGVRGN--------------------------------------------------------RGQVNYAASKAG 166 (249)
T ss_pred EEECCchhcCCC--------------------------------------------------------CCCchhHHHHHH
Confidence 999997665421 113469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.. ..+++++++|||.+.++..... .. ...... . . ....+.+.+|+|+++
T Consensus 167 ~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-------~~----~~~~~~-~---~-----~~~~~~~~~~va~~~ 226 (249)
T PRK12827 167 LIGLTKTLANELAPRGITVNAVAPGAINTPMADNA-------AP----TEHLLN-P---V-----PVQRLGEPDEVAALV 226 (249)
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc-------ch----HHHHHh-h---C-----CCcCCcCHHHHHHHH
Confidence 98888765 3489999999999998754210 00 001111 0 0 112245789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... ....+..+++.++
T Consensus 227 ~~l~~~~~-~~~~g~~~~~~~g 247 (249)
T PRK12827 227 AFLVSDAA-SYVTGQVIPVDGG 247 (249)
T ss_pred HHHcCccc-CCccCcEEEeCCC
Confidence 88885322 2212678888765
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-17 Score=152.48 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=149.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||++++++|+++| ++|.++.|+.++.. ...+.+ .. ...++
T Consensus 3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~~~---~~~~~~---------~~---------~~~~~ 58 (250)
T PRK12939 3 SNLAGKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAEAR---ELAAAL---------EA---------AGGRA 58 (250)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHH---HHHHHH---------Hh---------cCCcE
Confidence 34678999999999999999999999999 45677777654322 111111 00 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+.......++|+|||+||.... .+.++..++.|+.++.++++.+.+. .+..+|
T Consensus 59 ~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i 138 (250)
T PRK12939 59 HAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRI 138 (250)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEE
Confidence 899999996432111111111222569999999997532 2356667889999999999988653 134589
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 139 v~isS~~~~~~~--------------------------------------------------------~~~~~y~~sK~~ 162 (250)
T PRK12939 139 VNLASDTALWGA--------------------------------------------------------PKLGAYVASKGA 162 (250)
T ss_pred EEECchhhccCC--------------------------------------------------------CCcchHHHHHHH
Confidence 999997544321 112469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.|.+++.+ ..+++++.++||.+.++..... .. ..+...... ......+++.+|+|+++
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~----~~----~~~~~~~~~---------~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYV----PA----DERHAYYLK---------GRALERLQVPDDVAGAV 225 (250)
T ss_pred HHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc----CC----hHHHHHHHh---------cCCCCCCCCHHHHHHHH
Confidence 99998865 3579999999998876543111 00 001111111 11234578899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... ..-.++.+++.++
T Consensus 226 ~~l~~~~~-~~~~G~~i~~~gg 246 (250)
T PRK12939 226 LFLLSDAA-RFVTGQLLPVNGG 246 (250)
T ss_pred HHHhCccc-cCccCcEEEECCC
Confidence 99986322 1112678888776
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-17 Score=155.36 Aligned_cols=230 Identities=14% Similarity=0.121 Sum_probs=151.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+||||||+|+||.+++++|+++| .+|.+..|+.... .+...+.+ . ..+.++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~~--~~~~~~~~---------~---------~~~~~~ 98 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHED--ANETKQRV---------E---------KEGVKC 98 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchH--HHHHHHHH---------H---------hcCCeE
Confidence 56778999999999999999999999999 4567777765321 11111111 0 012468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFV 158 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v 158 (399)
.++.+|+++.+......+.......++|+|||+|+.... .+.+...+++|+.+..++++++.+. ....++|
T Consensus 99 ~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV 178 (290)
T PRK06701 99 LLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAII 178 (290)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEE
Confidence 889999996442111111111223468999999996421 1356778999999999999998763 2346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... ....|+.+|.+.
T Consensus 179 ~isS~~~~~~~~--------------------------------------------------------~~~~Y~~sK~a~ 202 (290)
T PRK06701 179 NTGSITGYEGNE--------------------------------------------------------TLIDYSATKGAI 202 (290)
T ss_pred EEecccccCCCC--------------------------------------------------------CcchhHHHHHHH
Confidence 999987765321 124699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++.++||.|.++.... ... ...+.... .......+.+.+|+|++++
T Consensus 203 ~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~---~~~-----~~~~~~~~---------~~~~~~~~~~~~dva~~~~ 265 (290)
T PRK06701 203 HAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS---DFD-----EEKVSQFG---------SNTPMQRPGQPEELAPAYV 265 (290)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCCCCccccc---ccC-----HHHHHHHH---------hcCCcCCCcCHHHHHHHHH
Confidence 9988876 348999999999998864311 000 01111111 1112345788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++....... .+.++++.++
T Consensus 266 ~ll~~~~~~~-~G~~i~idgg 285 (290)
T PRK06701 266 FLASPDSSYI-TGQMLHVNGG 285 (290)
T ss_pred HHcCcccCCc-cCcEEEeCCC
Confidence 9887432211 2678888775
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=151.72 Aligned_cols=236 Identities=18% Similarity=0.175 Sum_probs=151.5
Q ss_pred CCcccHH---hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcc
Q 015874 1 MELGSVV---EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGT 77 (399)
Q Consensus 1 ~~~~~~~---~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 77 (399)
||+..++ ..+++++||||||+|+||.++++.|+++| +.|.+..|+ ... +...+.+ ..
T Consensus 1 ~~~~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~-~~~---~~~~~~~----------~~--- 60 (258)
T PRK06935 1 MELDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHG-TNW---DETRRLI----------EK--- 60 (258)
T ss_pred CchhhhccccccCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCC-cHH---HHHHHHH----------Hh---
Confidence 6666554 33578999999999999999999999999 456777776 221 1111111 00
Q ss_pred cccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 78 RLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 78 ~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
.+.++.++.+|+++++......+...+.+..+|++||+||.... .+.++..+++|+.+...+++++.+
T Consensus 61 -----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (258)
T PRK06935 61 -----EGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAK 135 (258)
T ss_pred -----cCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 12468899999996432111111111223468999999997531 245777899999999988887765
Q ss_pred c---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 151 ~---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
. ++..++|++||...+... ..
T Consensus 136 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 159 (258)
T PRK06935 136 VMAKQGSGKIINIASMLSFQGG--------------------------------------------------------KF 159 (258)
T ss_pred HHHhcCCeEEEEECCHHhccCC--------------------------------------------------------CC
Confidence 2 245689999998755421 11
Q ss_pred CchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCe
Q 015874 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
...|+.+|.+.+.+++.+ ..|+++++++||.|..+.....+. . . ........ . . ....+
T Consensus 160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~---~-~---~~~~~~~~-~---~-----~~~~~ 223 (258)
T PRK06935 160 VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA---D-K---NRNDEILK-R---I-----PAGRW 223 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc---C-h---HHHHHHHh-c---C-----CCCCC
Confidence 246999999999998876 458999999999988764321110 0 0 00111111 1 1 11235
Q ss_pred eeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 303 i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...+|+|..+..++.... ..-.+.++.+.++
T Consensus 224 ~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgg 254 (258)
T PRK06935 224 GEPDDLMGAAVFLASRAS-DYVNGHILAVDGG 254 (258)
T ss_pred CCHHHHHHHHHHHcChhh-cCCCCCEEEECCC
Confidence 667899999998886322 2212677777765
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-16 Score=148.89 Aligned_cols=231 Identities=16% Similarity=0.090 Sum_probs=146.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++||||||+|+||+++++.|+++|+ +|..+.|+.++. +...+.+ .. .+.++.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~~i---------~~---------~~~~~~ 64 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAEEL---EEAAAHL---------EA---------LGIDAL 64 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 46789999999999999999999999994 567888865332 1111111 00 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~ 157 (399)
++.+|+++++......+........+|+|||+|+.... .+.+...+++|+.++.++++++.+. ++..+|
T Consensus 65 ~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~ 144 (259)
T PRK08213 65 WIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRI 144 (259)
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 89999996543111111111223468999999986421 2456777899999999999987653 245789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+..... .......|+.+|++
T Consensus 145 v~~sS~~~~~~~~~----------------------------------------------------~~~~~~~Y~~sKa~ 172 (259)
T PRK08213 145 INVASVAGLGGNPP----------------------------------------------------EVMDTIAYNTSKGA 172 (259)
T ss_pred EEECChhhccCCCc----------------------------------------------------cccCcchHHHHHHH
Confidence 99999755432110 00123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.|.+++.+ ..++++.+++|+.+-++.... . ...+......+. ...-+...+|+|.++
T Consensus 173 ~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~------~~~~~~~~~~~~---------~~~~~~~~~~va~~~ 234 (259)
T PRK08213 173 VINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---T------LERLGEDLLAHT---------PLGRLGDDEDLKGAA 234 (259)
T ss_pred HHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---h------hHHHHHHHHhcC---------CCCCCcCHHHHHHHH
Confidence 99998876 347999999998886643211 1 111122211111 112234578999988
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++......- .+..+++.++
T Consensus 235 ~~l~~~~~~~~-~G~~~~~~~~ 255 (259)
T PRK08213 235 LLLASDASKHI-TGQILAVDGG 255 (259)
T ss_pred HHHhCccccCc-cCCEEEECCC
Confidence 88875322211 2567777664
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=149.72 Aligned_cols=231 Identities=14% Similarity=0.118 Sum_probs=146.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||++++++|+++| .+|.++.|+.... ...++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------------~~~~~~ 52 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------------------------------LPEGVE 52 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------------------------------cCCcee
Confidence 4778999999999999999999999999 5568888875321 024678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC---------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---------FDERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+...+.+.++|+|||+||... ..+.++..+++|+.++..+.+.+.+. .+..+
T Consensus 53 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 132 (260)
T PRK06523 53 FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV 132 (260)
T ss_pred EEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 8999999654322111222233457899999999542 12457778999999998887766542 24468
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||...+.... .....|+.+|.
T Consensus 133 ii~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~ 157 (260)
T PRK06523 133 IIHVTSIQRRLPLP-------------------------------------------------------ESTTAYAAAKA 157 (260)
T ss_pred EEEEecccccCCCC-------------------------------------------------------CCcchhHHHHH
Confidence 99999976543210 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCc-chHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDL-KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
..+.+++.+ ..++++++++||.|.++..... ..+.... .............. ... ....+...+|+|
T Consensus 158 a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----p~~~~~~~~~va 231 (260)
T PRK06523 158 ALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGI-----PLGRPAEPEEVA 231 (260)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-ccC-----ccCCCCCHHHHH
Confidence 999888766 3589999999999988653110 0000000 00000010000000 001 112245679999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++..... .-.+..+.+.++
T Consensus 232 ~~~~~l~s~~~~-~~~G~~~~vdgg 255 (260)
T PRK06523 232 ELIAFLASDRAA-SITGTEYVIDGG 255 (260)
T ss_pred HHHHHHhCcccc-cccCceEEecCC
Confidence 999998863222 222678888776
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=151.09 Aligned_cols=224 Identities=14% Similarity=0.128 Sum_probs=146.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||.+++++|+++| .+|..+.|+...... ..++ ...++.+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~~~~----~~~~--------------------~~~~~~~ 65 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDVAEV----AAQL--------------------LGGNAKG 65 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHH----HHHh--------------------hCCceEE
Confidence 678999999999999999999999999 556888886542111 1110 0245678
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|+|||+||.... .+.+...+++|+.+..++++++.+. .+..+||+
T Consensus 66 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 145 (255)
T PRK06841 66 LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN 145 (255)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence 8999996442111111111223468999999997532 2456678999999999999988653 24578999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|.+.+
T Consensus 146 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 169 (255)
T PRK06841 146 LASQAGVVAL--------------------------------------------------------ERHVAYCASKAGVV 169 (255)
T ss_pred EcchhhccCC--------------------------------------------------------CCCchHHHHHHHHH
Confidence 9987532211 11346999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..++++..++||.|..+.... .+ .. ........ ......+.+.+|+|++++.
T Consensus 170 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~--~~-~~-----~~~~~~~~---------~~~~~~~~~~~~va~~~~~ 232 (255)
T PRK06841 170 GMTKVLALEWGPYGITVNAISPTVVLTELGKK--AW-AG-----EKGERAKK---------LIPAGRFAYPEEIAAAALF 232 (255)
T ss_pred HHHHHHHHHHHhhCeEEEEEEeCcCcCccccc--cc-ch-----hHHHHHHh---------cCCCCCCcCHHHHHHHHHH
Confidence 888765 358999999999987754311 01 00 00111111 0112357899999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... -.+.++.+.++
T Consensus 233 l~~~~~~~-~~G~~i~~dgg 251 (255)
T PRK06841 233 LASDAAAM-ITGENLVIDGG 251 (255)
T ss_pred HcCccccC-ccCCEEEECCC
Confidence 88643222 12677888776
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=149.79 Aligned_cols=210 Identities=16% Similarity=0.216 Sum_probs=139.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+||||+|+||++++++|+++| .+|.+++|+.... ++..+++ .. .+.++.++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~~~ 56 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETRL---ASLAQEL---------AD---------HGGEALVVP 56 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEEEE
Confidence 4789999999999999999999999 4568888875332 1111111 00 124688899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~S 161 (399)
+|+++++......+.....+.++|+|||+|+.... .+.+...++.|+.++.++++.+.+. .+..++|++|
T Consensus 57 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~s 136 (263)
T PRK06181 57 TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVS 136 (263)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 99996432111111111122468999999986532 1235667899999999999988642 2457899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .....|+.+|...+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 137 SLAGLTGV--------------------------------------------------------PTRSGYAASKHALHGF 160 (263)
T ss_pred cccccCCC--------------------------------------------------------CCccHHHHHHHHHHHH
Confidence 98765421 1235799999999998
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++.. ..++++++++||.+.++..... .. ..+.. ....+....++++++|+|++++.++
T Consensus 161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~------------~~~~~--~~~~~~~~~~~~~~~dva~~i~~~~ 223 (263)
T PRK06181 161 FDSLRIELADDGVAVTVVCPGFVATDIRKRA---LD------------GDGKP--LGKSPMQESKIMSAEECAEAILPAI 223 (263)
T ss_pred HHHHHHHhhhcCceEEEEecCccccCcchhh---cc------------ccccc--cccccccccCCCCHHHHHHHHHHHh
Confidence 8765 3589999999999877543110 00 00111 1111112347899999999999999
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
..
T Consensus 224 ~~ 225 (263)
T PRK06181 224 AR 225 (263)
T ss_pred hC
Confidence 73
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=148.53 Aligned_cols=226 Identities=14% Similarity=0.113 Sum_probs=146.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+|+||||+|+||++++++|+++| +.|.++.|+... ...+.+.+ .+.++.+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~~-~~~~~~~~----------------------~~~~~~~ 56 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEPS-ETQQQVEA----------------------LGRRFLS 56 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchHH-HHHHHHHh----------------------cCCceEE
Confidence 678999999999999999999999999 456777775421 11111110 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~v 158 (399)
+.+|+++++......+.......++|++||+||.... .+.++..+++|+.+..++++++.+. ++ ..++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 57 LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999997543211111111223569999999997532 2456778999999999999987642 12 46899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... ....|+.+|++.
T Consensus 137 ~~sS~~~~~~~~--------------------------------------------------------~~~~Y~~sKaa~ 160 (248)
T TIGR01832 137 NIASMLSFQGGI--------------------------------------------------------RVPSYTASKHGV 160 (248)
T ss_pred EEecHHhccCCC--------------------------------------------------------CCchhHHHHHHH
Confidence 999987665321 124699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..++++++++||.|..+...... .. . ........ .+ ....++..+|+|++++
T Consensus 161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~---~~-~---~~~~~~~~----~~-----~~~~~~~~~dva~~~~ 224 (248)
T TIGR01832 161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALR---AD-E---DRNAAILE----RI-----PAGRWGTPDDIGGPAV 224 (248)
T ss_pred HHHHHHHHHHhCccCcEEEEEEECcCcCcchhccc---cC-h---HHHHHHHh----cC-----CCCCCcCHHHHHHHHH
Confidence 9998876 34899999999999876431110 00 0 00000110 11 1235788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+.++.+.++
T Consensus 225 ~l~s~~~~-~~~G~~i~~dgg 244 (248)
T TIGR01832 225 FLASSASD-YVNGYTLAVDGG 244 (248)
T ss_pred HHcCcccc-CcCCcEEEeCCC
Confidence 98863222 112455555543
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=146.03 Aligned_cols=226 Identities=16% Similarity=0.216 Sum_probs=144.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||||+||+++++.|+++|+ +|.++.|+.... .+...+++ .. ...++.+
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~---~v~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 59 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA---NVVINYASSEAG--AEALVAEI---------GA---------LGGKALA 59 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCchhH--HHHHHHHH---------Hh---------cCCceEE
Confidence 4678999999999999999999999994 557777765321 11111111 00 1257888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|+|||+|+.... .+.++..++.|+.++.++++++.+. .+.++|++
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~ 139 (248)
T PRK05557 60 VQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN 139 (248)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9999996432111111111122468999999997532 2345677889999999999988753 24568999
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||.. +++.. ....|+.+|.+.
T Consensus 140 iss~~~~~~~~---------------------------------------------------------~~~~y~~sk~a~ 162 (248)
T PRK05557 140 ISSVVGLMGNP---------------------------------------------------------GQANYAASKAGV 162 (248)
T ss_pred EcccccCcCCC---------------------------------------------------------CCchhHHHHHHH
Confidence 99863 33321 135699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++++|||.+.++...+. . ..+....... .....+.+.+|+|+++.
T Consensus 163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~------~~~~~~~~~~---------~~~~~~~~~~~va~~~~ 224 (248)
T PRK05557 163 IGFTKSLARELASRGITVNAVAPGFIETDMTDAL---P------EDVKEAILAQ---------IPLGRLGQPEEIASAVA 224 (248)
T ss_pred HHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---C------hHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9888755 3589999999998865433111 0 0111111111 01224578899999998
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.++.|++.++
T Consensus 225 ~l~~~~~~-~~~g~~~~i~~~ 244 (248)
T PRK05557 225 FLASDEAA-YITGQTLHVNGG 244 (248)
T ss_pred HHcCcccC-CccccEEEecCC
Confidence 87753111 112678999876
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6e-16 Score=147.30 Aligned_cols=166 Identities=13% Similarity=0.168 Sum_probs=121.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++++|+||||||+||++++++|+++| ++|.+.+|+...... ..+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~~-----------------------------~~~~~~~ 50 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAAP-----------------------------IPGVELL 50 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhccc-----------------------------cCCCeeE
Confidence 46789999999999999999999999 566888887543211 1467889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
++|+++++......+...+.+..+|+|||+||.... .+.++..+++|+.++.++++.+... .+.++||++
T Consensus 51 ~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~i 130 (270)
T PRK06179 51 ELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINI 130 (270)
T ss_pred EeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 999996543111111111223468999999997532 2456788999999999999886432 357899999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 131 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 154 (270)
T PRK06179 131 SSVLGFLPA--------------------------------------------------------PYMALYAASKHAVEG 154 (270)
T ss_pred CCccccCCC--------------------------------------------------------CCccHHHHHHHHHHH
Confidence 997554321 113579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCC
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
+++.. ..|+++++++||.+.++..
T Consensus 155 ~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 155 YSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 88765 4689999999999988654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-16 Score=147.83 Aligned_cols=226 Identities=16% Similarity=0.115 Sum_probs=139.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++++||||+|+||++++++|+++|++| ....|+... ......+.+ .. .+.++.++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~v---v~~~~~~~~--~~~~~~~~l---------~~---------~~~~~~~~~ 58 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAV---CLNYLRNRD--AAEAVVQAI---------RR---------QGGEALAVA 58 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeE---EEecCCCHH--HHHHHHHHH---------Hh---------CCCcEEEEE
Confidence 4689999999999999999999999543 444333211 111111111 10 124577899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhcc--C----CceE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKCV--K----LKVF 157 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~~--~----~~~~ 157 (399)
+|+++.+......+...+.+.++|+|||+|+.... .+.++..+++|+.++.++++.+.+.- . ..++
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~i 138 (248)
T PRK06123 59 ADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAI 138 (248)
T ss_pred eccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence 99996432111111111223468999999997531 13566789999999999988876531 1 2368
Q ss_pred EEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 158 VHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 158 v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+++||.+. ++.. .....|+.+|.
T Consensus 139 v~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~~sKa 162 (248)
T PRK06123 139 VNVSSMAARLGSP--------------------------------------------------------GEYIDYAASKG 162 (248)
T ss_pred EEECchhhcCCCC--------------------------------------------------------CCccchHHHHH
Confidence 99998753 3321 00135999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..|.+++.+ ..+++++++||+.|+++..... . ....+..... ..+ ..-+.+++|++++
T Consensus 163 a~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~-----~---~~~~~~~~~~-~~p--------~~~~~~~~d~a~~ 225 (248)
T PRK06123 163 AIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-----G---EPGRVDRVKA-GIP--------MGRGGTAEEVARA 225 (248)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc-----C---CHHHHHHHHh-cCC--------CCCCcCHHHHHHH
Confidence 999988765 3589999999999999754210 0 0011111111 111 0112468999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... ...+..|++.++
T Consensus 226 ~~~l~~~~~~-~~~g~~~~~~gg 247 (248)
T PRK06123 226 ILWLLSDEAS-YTTGTFIDVSGG 247 (248)
T ss_pred HHHHhCcccc-CccCCEEeecCC
Confidence 9988863221 122678988764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=150.18 Aligned_cols=227 Identities=14% Similarity=0.152 Sum_probs=145.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||++++++|+++| ++|.++.|+.... .++.
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~~--------------------------------~~~~ 47 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPSY--------------------------------NDVD 47 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCcccc--------------------------------CceE
Confidence 3678999999999999999999999999 4567888875321 3578
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++++.+. .+..++|
T Consensus 48 ~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 127 (258)
T PRK06398 48 YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVII 127 (258)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 89999997543111111221223469999999997532 2457778999999999999887653 2457899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|+..
T Consensus 128 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaal 151 (258)
T PRK06398 128 NIASVQSFAVT--------------------------------------------------------RNAAAYVTSKHAV 151 (258)
T ss_pred EeCcchhccCC--------------------------------------------------------CCCchhhhhHHHH
Confidence 99998655421 1235799999999
Q ss_pred HHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 239 EMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 239 E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+.+.+.+ ...++++.++||.|-++............. . ........ . .........+...+|+|++++.
T Consensus 152 ~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~-~-~~~~~~~~----~-~~~~~~~~~~~~p~eva~~~~~ 224 (258)
T PRK06398 152 LGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKD-P-EHVERKIR----E-WGEMHPMKRVGKPEEVAYVVAF 224 (258)
T ss_pred HHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCC-h-hhhHHHHH----h-hhhcCCcCCCcCHHHHHHHHHH
Confidence 9998876 234899999999886653211100000000 0 00000000 0 0001112235678999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+.++.+.++
T Consensus 225 l~s~~~~-~~~G~~i~~dgg 243 (258)
T PRK06398 225 LASDLAS-FITGECVTVDGG 243 (258)
T ss_pred HcCcccC-CCCCcEEEECCc
Confidence 8863222 112567777665
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-16 Score=144.99 Aligned_cols=215 Identities=14% Similarity=0.087 Sum_probs=150.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++|.|+|||||+.||.++++.|.++| ++|....|+.+..+.+ . .+++. .++
T Consensus 2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~drL~~l---a-------------~~~~~-------~~~ 55 (246)
T COG4221 2 TTLKGKVALITGASSGIGEATARALAEAG---AKVVLAARREERLEAL---A-------------DEIGA-------GAA 55 (246)
T ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccHHHHHHH---H-------------Hhhcc-------Cce
Confidence 35677999999999999999999999999 6679999988654322 2 22211 468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
..+..|++|.+......+...+-+.++|++||+||.... .++|+.++++|+.|+.+..+++... ++..++
T Consensus 56 ~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~I 135 (246)
T COG4221 56 LALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHI 135 (246)
T ss_pred EEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceE
Confidence 889999997543222223333455679999999997632 3679999999999999999998763 355689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|.+||++.-- ++...+.|+.+|+.
T Consensus 136 iN~~SiAG~~--------------------------------------------------------~y~~~~vY~ATK~a 159 (246)
T COG4221 136 INLGSIAGRY--------------------------------------------------------PYPGGAVYGATKAA 159 (246)
T ss_pred EEeccccccc--------------------------------------------------------cCCCCccchhhHHH
Confidence 9999985211 12335689999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
...+.+.. ..+++++.+-||.|-...-...+.-... . ....++ .....+.-+|+|+.+
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~-----~--------~~~~~y----~~~~~l~p~dIA~~V 222 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDD-----E--------RADKVY----KGGTALTPEDIAEAV 222 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchh-----h--------hHHHHh----ccCCCCCHHHHHHHH
Confidence 98888765 4689999999999866432110000000 0 000111 234578889999999
Q ss_pred HHHHHhccC
Q 015874 313 IVAMVAHAK 321 (399)
Q Consensus 313 ~~~~~~~~~ 321 (399)
..++..+..
T Consensus 223 ~~~~~~P~~ 231 (246)
T COG4221 223 LFAATQPQH 231 (246)
T ss_pred HHHHhCCCc
Confidence 999985443
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-16 Score=146.67 Aligned_cols=212 Identities=16% Similarity=0.134 Sum_probs=137.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||++++++|+++| .+|+++.|+.+.. +...+++ +.++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~---------------------~~~~~~ 56 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDPASL---EAARAEL---------------------GESALV 56 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCHHHH---HHHHHHh---------------------CCceEE
Confidence 568999999999999999999999999 4567777764321 1111111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.+|+++++......+.......++|+|||+||.... .+.+...+++|+.++.++++++.+. ....+++++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 57 IRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 8999996432111112222233578999999997532 2456778999999999999999763 2334677766
Q ss_pred cc-eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 162 TA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 162 S~-~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
|. +.++. .....|+.+|++.|.
T Consensus 137 S~~~~~~~---------------------------------------------------------~~~~~Y~~sK~a~~~ 159 (249)
T PRK06500 137 SINAHIGM---------------------------------------------------------PNSSVYAASKAALLS 159 (249)
T ss_pred chHhccCC---------------------------------------------------------CCccHHHHHHHHHHH
Confidence 64 44432 113579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.+ ..+++++++|||.++++..... +... .....+......+. ...-+...+|+|+++..+
T Consensus 160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~-~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l 227 (249)
T PRK06500 160 LAKTLSGELLPRGIRVNAVSPGPVQTPLYGKL-GLPE--ATLDAVAAQIQALV---------PLGRFGTPEEIAKAVLYL 227 (249)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhh-ccCc--cchHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHH
Confidence 99655 3589999999999998643110 0000 00111111211111 011245789999999998
Q ss_pred HH
Q 015874 316 MV 317 (399)
Q Consensus 316 ~~ 317 (399)
+.
T Consensus 228 ~~ 229 (249)
T PRK06500 228 AS 229 (249)
T ss_pred cC
Confidence 86
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=151.83 Aligned_cols=230 Identities=15% Similarity=0.133 Sum_probs=148.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||.+++++|+++|++ |.+..|+.+.. ..+.+.+.+ .. .+.++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~---Vi~~~~~~~~~-~~~~~~~~~----------~~--------~~~~~~~ 104 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAISYLPVEEE-DAQDVKKII----------EE--------CGRKAVL 104 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEecCCcchh-hHHHHHHHH----------HH--------cCCeEEE
Confidence 67899999999999999999999999954 56665543321 112222111 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
+.+|+++++......+.....+.++|++||+|+... . .+.++..+++|+.++..+++++.+. ....+||++
T Consensus 105 ~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 184 (294)
T PRK07985 105 LPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITT 184 (294)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEE
Confidence 999999754321111222223456899999998632 1 2567788999999999999988763 234689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+.... ....|+.+|...+.
T Consensus 185 SS~~~~~~~~--------------------------------------------------------~~~~Y~asKaal~~ 208 (294)
T PRK07985 185 SSIQAYQPSP--------------------------------------------------------HLLDYAATKAAILN 208 (294)
T ss_pred CCchhccCCC--------------------------------------------------------CcchhHHHHHHHHH
Confidence 9987664321 12469999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.. ..|+++.+++||.|.++..... . .. ......... . . ....+...+|+|++++.+
T Consensus 209 l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~-~-~~-----~~~~~~~~~-~---~-----~~~r~~~pedva~~~~fL 272 (294)
T PRK07985 209 YSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-G-QT-----QDKIPQFGQ-Q---T-----PMKRAGQPAELAPVYVYL 272 (294)
T ss_pred HHHHHHHHHhHhCcEEEEEECCcCcccccccc-C-CC-----HHHHHHHhc-c---C-----CCCCCCCHHHHHHHHHhh
Confidence 88766 3589999999999998753110 0 00 011111111 0 1 112345689999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+..... .-.+.++.+.++
T Consensus 273 ~s~~~~-~itG~~i~vdgG 290 (294)
T PRK07985 273 ASQESS-YVTAEVHGVCGG 290 (294)
T ss_pred hChhcC-CccccEEeeCCC
Confidence 863222 112567777765
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.6e-16 Score=146.04 Aligned_cols=206 Identities=15% Similarity=0.181 Sum_probs=138.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++++|+||||+|+||++++++|+++| .+|.+++|+.... +...+++ . ..+.++
T Consensus 3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~~---~~~~~~~---------~---------~~~~~~ 58 (239)
T PRK07666 3 QSLQGKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEENL---KAVAEEV---------E---------AYGVKV 58 (239)
T ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------H---------HhCCeE
Confidence 34567899999999999999999999999 5568888875422 1111111 0 013578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+|+.... .+.++..++.|+.++.++++++.+. .+.+++
T Consensus 59 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 138 (239)
T PRK07666 59 VIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDI 138 (239)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEE
Confidence 899999996432111111111223479999999987532 2445677899999999999887642 246789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 139 v~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 162 (239)
T PRK07666 139 INISSTAGQKGA--------------------------------------------------------AVTSAYSASKFG 162 (239)
T ss_pred EEEcchhhccCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999987644321 123469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..+++++++|||.+.++..... . .... ....++..+|+|+++
T Consensus 163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------------~--------~~~~--~~~~~~~~~~~a~~~ 217 (239)
T PRK07666 163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------------G--------LTDG--NPDKVMQPEDLAEFI 217 (239)
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------------c--------cccc--CCCCCCCHHHHHHHH
Confidence 98888765 3589999999999877543110 0 0000 112457889999999
Q ss_pred HHHHHh
Q 015874 313 IVAMVA 318 (399)
Q Consensus 313 ~~~~~~ 318 (399)
+.++..
T Consensus 218 ~~~l~~ 223 (239)
T PRK07666 218 VAQLKL 223 (239)
T ss_pred HHHHhC
Confidence 999974
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=143.52 Aligned_cols=204 Identities=15% Similarity=0.152 Sum_probs=133.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||+++++.|+++ ++ |+++.|+..+. +.+.+. ..+++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~---V~~~~r~~~~~---~~~~~~----------------------~~~~~~~~ 53 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HT---LLLGGRPAERL---DELAAE----------------------LPGATPFP 53 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CC---EEEEeCCHHHH---HHHHHH----------------------hccceEEe
Confidence 579999999999999999999987 54 58888875322 111110 13578899
Q ss_pred ccCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
+|+++ .+....+++ ++|+|||+|+.... .+.+...++.|+.+..++.+.+.+. ...+++|+
T Consensus 54 ~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~ 126 (227)
T PRK08219 54 VDLTD-------PEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVF 126 (227)
T ss_pred cCCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEE
Confidence 99995 333334443 69999999997532 1346667888998866665554331 13568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...++.. .....|+.+|...+
T Consensus 127 ~ss~~~~~~~--------------------------------------------------------~~~~~y~~~K~a~~ 150 (227)
T PRK08219 127 INSGAGLRAN--------------------------------------------------------PGWGSYAASKFALR 150 (227)
T ss_pred EcchHhcCcC--------------------------------------------------------CCCchHHHHHHHHH
Confidence 9988765422 11356999999999
Q ss_pred HHHHHh---hCC-CcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 240 MLMQQS---KEN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 240 ~~l~~~---~~~-~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
.+++.. ..+ +++..++||.+.++... . +. .+. +.......+++++|+|++++.+
T Consensus 151 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------~-------~~---~~~-----~~~~~~~~~~~~~dva~~~~~~ 208 (227)
T PRK08219 151 ALADALREEEPGNVRVTSVHPGRTDTDMQR-------G-------LV---AQE-----GGEYDPERYLRPETVAKAVRFA 208 (227)
T ss_pred HHHHHHHHHhcCCceEEEEecCCccchHhh-------h-------hh---hhh-----ccccCCCCCCCHHHHHHHHHHH
Confidence 887765 234 88888888876543220 0 00 000 0011124679999999999999
Q ss_pred HHhccCCCCCCcEEEecC
Q 015874 316 MVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~ 333 (399)
++.... +.+|++.-
T Consensus 209 l~~~~~----~~~~~~~~ 222 (227)
T PRK08219 209 VDAPPD----AHITEVVV 222 (227)
T ss_pred HcCCCC----CccceEEE
Confidence 974322 45677654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.4e-16 Score=147.13 Aligned_cols=227 Identities=15% Similarity=0.109 Sum_probs=146.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|++|||||+|+||++++++|+++| .+|.++.|+. ... .+.++.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~-----~~~-------------------------~~~~~~~ 52 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF-----LTQ-------------------------EDYPFAT 52 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch-----hhh-------------------------cCCceEE
Confidence 778999999999999999999999999 4567777764 000 1256888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+++|+++++......+.....+.++|+|||+|+.... .+.+...+++|+.+...+++++... ++..+|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 132 (252)
T PRK08220 53 FVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT 132 (252)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999996432111111111223458999999997542 2456778999999999999987642 24468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 133 ~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 156 (252)
T PRK08220 133 VGSNAAHVPR--------------------------------------------------------IGMAAYGASKAALT 156 (252)
T ss_pred ECCchhccCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9987543211 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..++++++++||.+.++..... + .........+.. ....+ ........+++++|+|++++.
T Consensus 157 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~--~-~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 157 SLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTL--W-VDEDGEQQVIAG----FPEQF-KLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHhhHhCeEEEEEecCcCcchhhhhh--c-cchhhhhhhhhh----HHHHH-hhcCCCcccCCHHHHHHHHHH
Confidence 998766 3689999999999998754211 0 000000000000 00000 011123468999999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+.+..+.++
T Consensus 229 l~~~~~~-~~~g~~i~~~gg 247 (252)
T PRK08220 229 LASDLAS-HITLQDIVVDGG 247 (252)
T ss_pred Hhcchhc-CccCcEEEECCC
Confidence 8863222 112556666655
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=146.57 Aligned_cols=223 Identities=10% Similarity=0.072 Sum_probs=141.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..+|++|||||+|+||++++++|+++|+ .|.+..|+... ..+...+.+ .. .+.++.+
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 63 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSRD--EAEALAAEI---------RA---------LGRRAVA 63 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCeEEE
Confidence 3578999999999999999999999994 45666654321 111111111 00 1356888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.......++|+|||+||.... .+.++..+++|+.++.++++++.+. ....++++
T Consensus 64 ~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (258)
T PRK09134 64 LQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN 143 (258)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 9999996442111111111123468999999986432 2456788999999999999988763 12357777
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... +....|+.+|...|
T Consensus 144 ~~s~~~~~~~--------------------------------------------------------p~~~~Y~~sK~a~~ 167 (258)
T PRK09134 144 MIDQRVWNLN--------------------------------------------------------PDFLSYTLSKAALW 167 (258)
T ss_pred ECchhhcCCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 7765433311 11246999999999
Q ss_pred HHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 240 MLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 240 ~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
.+.+.+ ..+++++.++||.+...... . . ..+....... + .....+++|+|++++.+
T Consensus 168 ~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-------~---~-~~~~~~~~~~----~-----~~~~~~~~d~a~~~~~~ 227 (258)
T PRK09134 168 TATRTLAQALAPRIRVNAIGPGPTLPSGRQ-------S---P-EDFARQHAAT----P-----LGRGSTPEEIAAAVRYL 227 (258)
T ss_pred HHHHHHHHHhcCCcEEEEeecccccCCccc-------C---h-HHHHHHHhcC----C-----CCCCcCHHHHHHHHHHH
Confidence 988876 23489999999988764321 0 0 0111111110 0 11236789999999999
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.. .... ++.|++.++
T Consensus 228 ~~~-~~~~--g~~~~i~gg 243 (258)
T PRK09134 228 LDA-PSVT--GQMIAVDGG 243 (258)
T ss_pred hcC-CCcC--CCEEEECCC
Confidence 973 2222 678888876
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.5e-16 Score=145.13 Aligned_cols=228 Identities=11% Similarity=0.098 Sum_probs=143.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+++||||+|+||.+++++|+++|++ |.+.. |+.+.. +...+++ .. .+.++.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~~~---~~~~~~~---------~~---------~~~~~~ 57 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKEEA---EETVYEI---------QS---------NGGSAF 57 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcCCCHHHH---HHHHHHH---------Hh---------cCCceE
Confidence 46899999999999999999999999954 45543 332221 1111111 00 124567
Q ss_pred EEeccCCCCCCCCCchhhHHHH----h--cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 89 FVPGDISSEDLGLKDSNLKEEL----W--NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~----~--~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
.+.+|+++.+......+...+. . .++|++||+||.... .+.++..+++|+.++..+++++.+. .+.
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 137 (252)
T PRK12747 58 SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN 137 (252)
T ss_pred EEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC
Confidence 7889999754211111111111 1 269999999996421 1346778899999999999887653 234
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.|
T Consensus 138 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 161 (252)
T PRK12747 138 SRIINISSAATRISL--------------------------------------------------------PDFIAYSMT 161 (252)
T ss_pred CeEEEECCcccccCC--------------------------------------------------------CCchhHHHH
Confidence 689999998654321 112569999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|++.+.+++.+ ..+++++.+.||.|.++.... +... ........ . . .....+...+|+|
T Consensus 162 Kaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~---~~~~-----~~~~~~~~-~---~----~~~~~~~~~~dva 225 (252)
T PRK12747 162 KGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE---LLSD-----PMMKQYAT-T---I----SAFNRLGEVEDIA 225 (252)
T ss_pred HHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh---cccC-----HHHHHHHH-h---c----CcccCCCCHHHHH
Confidence 99999999865 458999999999998864311 1110 00111110 0 0 0123467889999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++..... .-.+..+.+.++
T Consensus 226 ~~~~~l~s~~~~-~~~G~~i~vdgg 249 (252)
T PRK12747 226 DTAAFLASPDSR-WVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHcCcccc-CcCCcEEEecCC
Confidence 999988763222 112567777665
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.6e-16 Score=145.64 Aligned_cols=235 Identities=12% Similarity=0.117 Sum_probs=143.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|+||||+|+||.++++.|+++|++ |.++.++.. .....++..+++ .. .+.++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~---vv~i~~~~~~~~~~~~~~~~~l---------~~---------~~~~~ 63 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAK---AVAIHYNSAASKADAEETVAAV---------KA---------AGAKA 63 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCc---EEEEecCCccchHHHHHHHHHH---------HH---------hCCcE
Confidence 357899999999999999999999999954 355554432 222223322222 00 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
.++++|+++++......+.......++|++||+||.... .+.++..+++|+.++..+++++.+. ....++++
T Consensus 64 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~ 143 (257)
T PRK12744 64 VAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVT 143 (257)
T ss_pred EEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEE
Confidence 889999997543211111111223468999999997421 2457778999999999999988753 23356666
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
++|..+.... +....|+.+|++.|
T Consensus 144 ~~ss~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 167 (257)
T PRK12744 144 LVTSLLGAFT--------------------------------------------------------PFYSAYAGSKAPVE 167 (257)
T ss_pred EecchhcccC--------------------------------------------------------CCcccchhhHHHHH
Confidence 5333222111 11256999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++.++||.+.++...+... .. . .. . ...... ........+.+.+|+|+++..
T Consensus 168 ~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~--~~-----~-~~-~-~~~~~~--~~~~~~~~~~~~~dva~~~~~ 235 (257)
T PRK12744 168 HFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG--AE-----A-VA-Y-HKTAAA--LSPFSKTGLTDIEDIVPFIRF 235 (257)
T ss_pred HHHHHHHHHhCcCceEEEEEecCccccchhccccc--cc-----h-hh-c-cccccc--ccccccCCCCCHHHHHHHHHH
Confidence 999877 247999999999997754321100 00 0 00 0 000000 011112247889999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.. .. .-.+.++++.++
T Consensus 236 l~~~-~~-~~~g~~~~~~gg 253 (257)
T PRK12744 236 LVTD-GW-WITGQTILINGG 253 (257)
T ss_pred hhcc-cc-eeecceEeecCC
Confidence 8873 21 111578888776
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.5e-16 Score=147.89 Aligned_cols=198 Identities=13% Similarity=0.069 Sum_probs=135.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||||+||+++++.|+++| .+|.+..|+.+.. +...+.+ .++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~~----------------------~~~~~ 54 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDEALA---KETAAEL----------------------GLVVG 54 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHh----------------------ccceE
Confidence 567899999999999999999999999 4567777765432 2221111 25778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+...++|++||+||.... .+.+...+++|+.++..+++.+.+. .+..+||+
T Consensus 55 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 134 (273)
T PRK07825 55 GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVN 134 (273)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 8999997543211122222334578999999997532 2356778899999999988877542 25568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+.+... .....|+.+|...+
T Consensus 135 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 158 (273)
T PRK07825 135 VASLAGKIPV--------------------------------------------------------PGMATYCASKHAVV 158 (273)
T ss_pred EcCccccCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9998654321 11356999999888
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++++++|+.+-++.. .. . . ......++..+|+|++++.
T Consensus 159 ~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------~~--------------~----~--~~~~~~~~~~~~va~~~~~ 211 (273)
T PRK07825 159 GFTDAARLELRGTGVHVSVVLPSFVNTELI-------AG--------------T----G--GAKGFKNVEPEDVAAAIVG 211 (273)
T ss_pred HHHHHHHHHhhccCcEEEEEeCCcCcchhh-------cc--------------c----c--cccCCCCCCHHHHHHHHHH
Confidence 766554 4589999999998754321 00 0 0 0112346889999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
++..
T Consensus 212 ~l~~ 215 (273)
T PRK07825 212 TVAK 215 (273)
T ss_pred HHhC
Confidence 9974
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=145.68 Aligned_cols=205 Identities=14% Similarity=0.127 Sum_probs=133.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||||+||.++++.|+++| .+|.++.|+.++. +.+.+. .+.++.++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------------------~~~~~~~~~~ 53 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQERL---QELKDE---------------------LGDNLYIAQL 53 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------------------hccceEEEEe
Confidence 689999999999999999999999 4568888875432 222111 1246888999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccC--------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK--------FDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
|+++++......+...+.+.++|+|||+||... ..+.++..+++|+.++..+++.+.+. .+..++|++|
T Consensus 54 Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 133 (248)
T PRK10538 54 DVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 999643211111111122347999999998642 12456778999999988877776532 2567899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|.+..... .....|+.+|...+.+
T Consensus 134 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 157 (248)
T PRK10538 134 STAGSWPY--------------------------------------------------------AGGNVYGATKAFVRQF 157 (248)
T ss_pred CcccCCCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 97543211 1235799999999999
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.. ..++++.+++||.+.|+.... ..+... ..... ..+. ...++..+|+|++++.++
T Consensus 158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~-~~~~~~----~~~~~--------~~~~----~~~~~~~~dvA~~~~~l~ 220 (248)
T PRK10538 158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-VRFKGD----DGKAE--------KTYQ----NTVALTPEDVSEAVWWVA 220 (248)
T ss_pred HHHHHHHhcCCCcEEEEEeCCeecccccch-hhccCc----HHHHH--------hhcc----ccCCCCHHHHHHHHHHHh
Confidence 8765 357999999999998643210 000000 00000 0001 113468899999999988
Q ss_pred H
Q 015874 317 V 317 (399)
Q Consensus 317 ~ 317 (399)
.
T Consensus 221 ~ 221 (248)
T PRK10538 221 T 221 (248)
T ss_pred c
Confidence 6
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-16 Score=145.01 Aligned_cols=205 Identities=12% Similarity=0.066 Sum_probs=138.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+++||||+|+||.++++.|+++| .+|+++.|+.... +.+.+.+ .+ .+.++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~~ 60 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAG---WDLALVARSQDAL---EALAAEL---------RS---------TGVKAAAY 60 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------CCCcEEEE
Confidence 46799999999999999999999999 5678888875432 1221111 00 12468889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
.+|+++++......+...+.+.++|+|||+||.... .+.++..++.|+.++.++++.+.+. .+..++|++
T Consensus 61 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 61 SIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 999997543211111111223469999999997432 2456777899999999988877542 245789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...++.. .....|+.+|.+.+.
T Consensus 141 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 141 SSIAARNAF--------------------------------------------------------PQWGAYCVSKAALAA 164 (241)
T ss_pred ccHHhCcCC--------------------------------------------------------CCccHHHHHHHHHHH
Confidence 998766532 113569999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..+++++++|||.+-++.... .. ..... .....+..+|+|++++.+
T Consensus 165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~-----~~--------------~~~~~-----~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDT-----ET--------------VQADF-----DRSAMLSPEQVAQTILHL 220 (241)
T ss_pred HHHHHHHHhhhhCCEEEEEecCcccCCcccc-----cc--------------ccccc-----ccccCCCHHHHHHHHHHH
Confidence 88754 458999999999987653210 00 00000 012357889999999999
Q ss_pred HHhc
Q 015874 316 MVAH 319 (399)
Q Consensus 316 ~~~~ 319 (399)
+..+
T Consensus 221 ~~~~ 224 (241)
T PRK07454 221 AQLP 224 (241)
T ss_pred HcCC
Confidence 8643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=168.07 Aligned_cols=234 Identities=18% Similarity=0.191 Sum_probs=152.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.|++|+||||+|+||+++++.|+++| .+|.++.|+.... +...+.+ +. ..++.+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~~---~~~~~~l-------------~~------~~~v~~ 474 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEAA---EAAAAEL-------------GG------PDRALG 474 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHHH---HHHHHHH-------------hc------cCcEEE
Confidence 577999999999999999999999999 4568888876432 1111111 00 036888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC-ceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL-KVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~-~~~v 158 (399)
+.+|+++++......+.......++|+|||+||.... .+.++..+++|+.++.++++++.+. .+. .+||
T Consensus 475 v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV 554 (681)
T PRK08324 475 VACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIV 554 (681)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999996432111111111113479999999996532 2456778999999999998877643 132 6899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 555 ~vsS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 578 (681)
T PRK08324 555 FIASKNAVNPG--------------------------------------------------------PNFGAYGAAKAAE 578 (681)
T ss_pred EECCccccCCC--------------------------------------------------------CCcHHHHHHHHHH
Confidence 99997554321 1135799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCcee-cCCCCCCCCcccCcchHHHHHHHhhcCccc----cccCCCccccCeeeHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVS-GTYKEPFPGWVEDLKTINTLFVASAQGNLR----CLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dv 308 (399)
+.+++.+ ..++++++++|+.|| ++.... ..+.. ......+... ..+..+.....+++.+|+
T Consensus 579 ~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~--------~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~Dv 649 (681)
T PRK08324 579 LHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIE--------ARAAAYGLSEEELEEFYRARNLLKREVTPEDV 649 (681)
T ss_pred HHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhh--------hhhhhccCChHHHHHHHHhcCCcCCccCHHHH
Confidence 9999876 347999999999998 433200 11110 0001111111 123344456789999999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++.... ....+.+|++.++
T Consensus 650 A~a~~~l~s~~~-~~~tG~~i~vdgG 674 (681)
T PRK08324 650 AEAVVFLASGLL-SKTTGAIITVDGG 674 (681)
T ss_pred HHHHHHHhCccc-cCCcCCEEEECCC
Confidence 999999885211 2223789999887
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=6e-16 Score=144.55 Aligned_cols=222 Identities=16% Similarity=0.174 Sum_probs=141.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||+++++.|+++|+ .|....|+.++. +.+.+. .+.++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~~~~---~~~~~~---------------------~~~~~~~ 56 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVEKL---EALAAE---------------------LGERVKI 56 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHHH---HHHHHH---------------------hCCceEE
Confidence 5789999999999999999999999994 456666654322 111110 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++.+......+.....+.++|+|||+|+.... .+.++..+++|+.+..++++++.+. .+..+||+
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T PRK12936 57 FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN 136 (245)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 9999996432111111111223568999999997532 2456778999999999998876532 25678999
Q ss_pred Eeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||... ++.. ....|+.+|...
T Consensus 137 ~sS~~~~~~~~---------------------------------------------------------~~~~Y~~sk~a~ 159 (245)
T PRK12936 137 ITSVVGVTGNP---------------------------------------------------------GQANYCASKAGM 159 (245)
T ss_pred ECCHHhCcCCC---------------------------------------------------------CCcchHHHHHHH
Confidence 999643 3321 124699999988
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.. ..++++++++||.+.++.... +.. .......+. . ....+...+|+++++.
T Consensus 160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~---~~~-------~~~~~~~~~---~-----~~~~~~~~~~ia~~~~ 221 (245)
T PRK12936 160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK---LND-------KQKEAIMGA---I-----PMKRMGTGAEVASAVA 221 (245)
T ss_pred HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc---cCh-------HHHHHHhcC---C-----CCCCCcCHHHHHHHHH
Confidence 7777654 458999999999876543211 000 011111111 1 1223556899999998
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.. ....-.++.+++.++
T Consensus 222 ~l~~~-~~~~~~G~~~~~~~g 241 (245)
T PRK12936 222 YLASS-EAAYVTGQTIHVNGG 241 (245)
T ss_pred HHcCc-cccCcCCCEEEECCC
Confidence 87753 222223678998876
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.9e-16 Score=145.30 Aligned_cols=236 Identities=16% Similarity=0.138 Sum_probs=147.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++|+|+||||+|+||.++++.|+++| .+|.++.|+.+.. +...+++ .. ...+.++
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~~---~~~~~~~---------~~-------~~~~~~~ 60 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAALA---ERAAAAI---------AR-------DVAGARV 60 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh-------ccCCceE
Confidence 44788999999999999999999999999 5567888865432 2222211 00 0013568
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. ++..++
T Consensus 61 ~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 140 (260)
T PRK07063 61 LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSI 140 (260)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEE
Confidence 899999997543111111111223579999999996432 2467788999999999999987652 244689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|++
T Consensus 141 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa 164 (260)
T PRK07063 141 VNIASTHAFKII--------------------------------------------------------PGCFPYPVAKHG 164 (260)
T ss_pred EEECChhhccCC--------------------------------------------------------CCchHHHHHHHH
Confidence 999997543321 112469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|++++.++||.|-.+..... +... ............ . .+ ..-+...+|+|+++
T Consensus 165 ~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~--~~~~-~~~~~~~~~~~~-~---~~-----~~r~~~~~~va~~~ 232 (260)
T PRK07063 165 LLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW--WNAQ-PDPAAARAETLA-L---QP-----MKRIGRPEEVAMTA 232 (260)
T ss_pred HHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh--hhcc-CChHHHHHHHHh-c---CC-----CCCCCCHHHHHHHH
Confidence 99998766 4589999999999866543110 0000 000000111110 0 01 11245679999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+....+.++
T Consensus 233 ~fl~s~~~~-~itG~~i~vdgg 253 (260)
T PRK07063 233 VFLASDEAP-FINATCITIDGG 253 (260)
T ss_pred HHHcCcccc-ccCCcEEEECCC
Confidence 998863222 112566667665
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=144.17 Aligned_cols=228 Identities=14% Similarity=0.060 Sum_probs=147.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+|+||||+|+||+++++.|+++| .+|.++.|+.+.. +...+++ ++ .+.++.+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 64 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAATL---EAAVAAL---------RA---------AGGAAEA 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEE
Confidence 678999999999999999999999999 5668888875332 1211111 00 1346889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.......++|+|||+|+.... .+.++..+++|+.++..+.+.+.+. .+..+||+
T Consensus 65 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 144 (256)
T PRK06124 65 LAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIA 144 (256)
T ss_pred EEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999996542111111111223468999999997432 2456778999999999999777542 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|.+.+
T Consensus 145 ~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 168 (256)
T PRK06124 145 ITSIAGQVAR--------------------------------------------------------AGDAVYPAAKQGLT 168 (256)
T ss_pred EeechhccCC--------------------------------------------------------CCccHhHHHHHHHH
Confidence 9987543211 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..++++..++||.|.++.... +... . .+...... . . ....+++.+|++.+++.
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---~~~~-~---~~~~~~~~-~---~-----~~~~~~~~~~~a~~~~~ 232 (256)
T PRK06124 169 GLMRALAAEFGPHGITSNAIAPGYFATETNAA---MAAD-P---AVGPWLAQ-R---T-----PLGRWGRPEEIAGAAVF 232 (256)
T ss_pred HHHHHHHHHHHHhCcEEEEEEECCccCcchhh---hccC-h---HHHHHHHh-c---C-----CCCCCCCHHHHHHHHHH
Confidence 888765 348999999999998865311 1000 0 11111111 1 0 11247889999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+.+.++
T Consensus 233 l~~~~~~-~~~G~~i~~dgg 251 (256)
T PRK06124 233 LASPAAS-YVNGHVLAVDGG 251 (256)
T ss_pred HcCcccC-CcCCCEEEECCC
Confidence 9874322 112556666554
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=146.99 Aligned_cols=233 Identities=12% Similarity=0.107 Sum_probs=146.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|++|||||+|+||.+++++|+++| .+|.+..|+ +.. +...+++ .+ .+.++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~-~~~---~~~~~~~---------~~---------~~~~~~~ 58 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIA-EAV---SETVDKI---------KS---------NGGKAKA 58 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCc-HHH---HHHHHHH---------Hh---------cCCeEEE
Confidence 678999999999999999999999999 556888887 322 1111111 00 1246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+++++.+. +...++|+
T Consensus 59 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~ 138 (272)
T PRK08589 59 YHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN 138 (272)
T ss_pred EEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 9999997543221122222223468999999997531 1346777889999998888877653 12368999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|.+.+
T Consensus 139 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 162 (272)
T PRK08589 139 TSSFSGQAAD--------------------------------------------------------LYRSGYNAAKGAVI 162 (272)
T ss_pred eCchhhcCCC--------------------------------------------------------CCCchHHHHHHHHH
Confidence 9997644321 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..|++++.+.||.|..+......+... ......+...... .. ....+...+|+|++++.
T Consensus 163 ~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~---~~-----~~~~~~~~~~va~~~~~ 232 (272)
T PRK08589 163 NFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE--DEAGKTFRENQKW---MT-----PLGRLGKPEEVAKLVVF 232 (272)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch--hhHHHHHhhhhhc---cC-----CCCCCcCHHHHHHHHHH
Confidence 998876 458999999999997754311110000 0000001000000 00 11124678999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... -.+..+.+.++
T Consensus 233 l~s~~~~~-~~G~~i~vdgg 251 (272)
T PRK08589 233 LASDDSSF-ITGETIRIDGG 251 (272)
T ss_pred HcCchhcC-cCCCEEEECCC
Confidence 88632221 12667777665
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.4e-16 Score=145.37 Aligned_cols=229 Identities=14% Similarity=0.069 Sum_probs=144.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||.++++.|+++| ++|.+++|+..+. +.+.+++ .. .+.++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 59 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAEL---DQLVAEI---------RA---------EGGEAVA 59 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 578999999999999999999999999 5568888875432 2222111 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+.+++.+. .+..++|
T Consensus 60 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv 139 (254)
T PRK07478 60 LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLI 139 (254)
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence 9999996543111111111223478999999997421 1456778999999988887765542 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... .....|+.||++.
T Consensus 140 ~~sS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~a~ 164 (254)
T PRK07478 140 FTSTFVGHTAGF-------------------------------------------------------PGMAAYAASKAGL 164 (254)
T ss_pred EEechHhhccCC-------------------------------------------------------CCcchhHHHHHHH
Confidence 999976543110 1135799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++.++||.|-.+..... ... . . ........ .....+...+|+|++++
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-~---~-~~~~~~~~--------~~~~~~~~~~~va~~~~ 228 (254)
T PRK07478 165 IGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM---GDT-P---E-ALAFVAGL--------HALKRMAQPEEIAQAAL 228 (254)
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc---cCC-H---H-HHHHHHhc--------CCCCCCcCHHHHHHHHH
Confidence 9998866 3479999999999866532110 000 0 0 01111100 01123567899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+.++.+.++
T Consensus 229 ~l~s~~~~-~~~G~~~~~dgg 248 (254)
T PRK07478 229 FLASDAAS-FVTGTALLVDGG 248 (254)
T ss_pred HHcCchhc-CCCCCeEEeCCc
Confidence 98863222 112566766554
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=144.17 Aligned_cols=230 Identities=16% Similarity=0.113 Sum_probs=146.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++|+||||+|+||++++++|+++| .+|.+..|+.+... +..+++ .. .+.++.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~~---~~~~~~---------~~---------~~~~~~ 59 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAGGE---ETVALI---------RE---------AGGEAL 59 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHH---HHHHHH---------Hh---------cCCceE
Confidence 4678999999999999999999999999 45688888764322 111111 00 135688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.+...+++++... .+..++
T Consensus 60 ~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 139 (253)
T PRK06172 60 FVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAI 139 (253)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99999996432111111111223468999999996421 2456777899999998887765431 245689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
+++||...+.... ....|+.+|.+
T Consensus 140 i~~sS~~~~~~~~--------------------------------------------------------~~~~Y~~sKaa 163 (253)
T PRK06172 140 VNTASVAGLGAAP--------------------------------------------------------KMSIYAASKHA 163 (253)
T ss_pred EEECchhhccCCC--------------------------------------------------------CCchhHHHHHH
Confidence 9999986655321 13569999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..++++.+++||.|-.+....... . ... ......... ....+...+|+++.+
T Consensus 164 ~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~---~---~~~-~~~~~~~~~--------~~~~~~~p~~ia~~~ 228 (253)
T PRK06172 164 VIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE---A---DPR-KAEFAAAMH--------PVGRIGKVEEVASAV 228 (253)
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc---c---ChH-HHHHHhccC--------CCCCccCHHHHHHHH
Confidence 99988766 357999999999986654321110 0 001 111111110 111245689999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++..... .-.|..+++.++
T Consensus 229 ~~l~~~~~~-~~~G~~i~~dgg 249 (253)
T PRK06172 229 LYLCSDGAS-FTTGHALMVDGG 249 (253)
T ss_pred HHHhCcccc-CcCCcEEEECCC
Confidence 998864322 112677777765
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=142.92 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=144.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||.++++.|+++| .+|.+..|+..+.... .+++ . . .+.++.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~~~~~~---~~~~---------~----~-----~~~~~~~ 58 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQEKLEEA---VAEC---------G----A-----LGTEVRG 58 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH---HHHH---------H----h-----cCCceEE
Confidence 578999999999999999999999999 4567777765332111 1111 0 0 1356888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------------~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
+.+|+++++......+........+|+|||+||.... .+.+...+++|+.++..+.+.+.+.
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~ 138 (253)
T PRK08217 59 YAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMI 138 (253)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999996432111111111112458999999985321 1345667889999998887765432
Q ss_pred --cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 015874 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (399)
Q Consensus 152 --~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
.....++++||.+.++.. ...
T Consensus 139 ~~~~~~~iv~~ss~~~~~~~---------------------------------------------------------~~~ 161 (253)
T PRK08217 139 ESGSKGVIINISSIARAGNM---------------------------------------------------------GQT 161 (253)
T ss_pred hcCCCeEEEEEccccccCCC---------------------------------------------------------CCc
Confidence 123468999988766531 135
Q ss_pred hhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeee
Q 015874 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (399)
Q Consensus 230 ~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 304 (399)
.|+.+|.+.+.+++.+ ..+++++.++|+.+.++.... .. .........+. ....+.+
T Consensus 162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~------~~~~~~~~~~~---------~~~~~~~ 223 (253)
T PRK08217 162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MK------PEALERLEKMI---------PVGRLGE 223 (253)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cC------HHHHHHHHhcC---------CcCCCcC
Confidence 6999999999998866 358999999999998765311 00 01111111111 1234568
Q ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 305 v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+|+|+++..++.. .... +.+|+++++
T Consensus 224 ~~~~a~~~~~l~~~-~~~~--g~~~~~~gg 250 (253)
T PRK08217 224 PEEIAHTVRFIIEN-DYVT--GRVLEIDGG 250 (253)
T ss_pred HHHHHHHHHHHHcC-CCcC--CcEEEeCCC
Confidence 89999999998853 2222 789999886
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=143.78 Aligned_cols=228 Identities=13% Similarity=0.138 Sum_probs=145.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.++++|||||+|+||.+++++|+++| .+|.+..|+.... ++..+++ +. .+.++.+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~~---~~~~~~l---------~~---------~~~~~~~ 62 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAERA---ELAVAKL---------RQ---------EGIKAHA 62 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHHHH---------Hh---------cCCeEEE
Confidence 678999999999999999999999999 4567777765432 1111111 00 1246778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++..+++.+.+. ++..+||+
T Consensus 63 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK08085 63 APFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN 142 (254)
T ss_pred EecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 8999996543111111111223468999999996431 2567778999999999998887653 24578999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|.+.+
T Consensus 143 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 166 (254)
T PRK08085 143 ICSMQSELGR--------------------------------------------------------DTITPYAASKGAVK 166 (254)
T ss_pred EccchhccCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9987432110 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..++++..++||.+.++...... .. . . ........ .....+...+|+|+++..
T Consensus 167 ~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~---~~-~---~-~~~~~~~~--------~p~~~~~~~~~va~~~~~ 230 (254)
T PRK08085 167 MLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV---ED-E---A-FTAWLCKR--------TPAARWGDPQELIGAAVF 230 (254)
T ss_pred HHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc---cC-H---H-HHHHHHhc--------CCCCCCcCHHHHHHHHHH
Confidence 999876 45899999999999886542110 00 0 1 11111111 112346678999999988
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+....+.++
T Consensus 231 l~~~~~~-~i~G~~i~~dgg 249 (254)
T PRK08085 231 LSSKASD-FVNGHLLFVDGG 249 (254)
T ss_pred HhCcccc-CCcCCEEEECCC
Confidence 8863221 112556666554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.9e-16 Score=144.69 Aligned_cols=228 Identities=17% Similarity=0.190 Sum_probs=143.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+++||||+|+||++++++|+++|+ +|.+..|+... ..+.+. ..++.+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~l~------------------------~~~~~~ 55 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA---KVAVLYNSAEN--EAKELR------------------------EKGVFT 55 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcHH--HHHHHH------------------------hCCCeE
Confidence 5789999999999999999999999995 45666554321 111111 124778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++.+.+. .+..++|+
T Consensus 56 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~ 135 (255)
T PRK06463 56 IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVN 135 (255)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999997543221111221223478999999987431 2456778999999987776655432 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...++... .....|+.+|.+.+
T Consensus 136 isS~~~~~~~~-------------------------------------------------------~~~~~Y~asKaa~~ 160 (255)
T PRK06463 136 IASNAGIGTAA-------------------------------------------------------EGTTFYAITKAGII 160 (255)
T ss_pred EcCHHhCCCCC-------------------------------------------------------CCccHhHHHHHHHH
Confidence 99986654210 11246999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..+++++.++||.|-.+...... .. ..... ........ .....+...+|+|++++.
T Consensus 161 ~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~---~~-~~~~~-~~~~~~~~--------~~~~~~~~~~~va~~~~~ 227 (255)
T PRK06463 161 ILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGK---SQ-EEAEK-LRELFRNK--------TVLKTTGKPEDIANIVLF 227 (255)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCCCchhhccc---Cc-cchHH-HHHHHHhC--------CCcCCCcCHHHHHHHHHH
Confidence 998876 35899999999988654321100 00 00000 11111100 112345678999999999
Q ss_pred HHHhccCCCCCCcEEEecCCC
Q 015874 315 AMVAHAKQPSDANIYHVGSSL 335 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~ 335 (399)
++..... .-.+..+.+.++.
T Consensus 228 l~s~~~~-~~~G~~~~~dgg~ 247 (255)
T PRK06463 228 LASDDAR-YITGQVIVADGGR 247 (255)
T ss_pred HcChhhc-CCCCCEEEECCCe
Confidence 8863322 1226788887763
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=146.05 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=145.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||+++++.|+++| .+|.+..|+.+.. ++..++ .+.++.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------------------~~~~~~~ 56 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDADNG---AAVAAS---------------------LGERARF 56 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------------------hCCeeEE
Confidence 678999999999999999999999999 4568888875432 221111 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~S 161 (399)
+.+|+++++......+.....+..+|++||+||.... .+.++..+++|+.++..+++.+.+. ++..++|++|
T Consensus 57 ~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 57 IATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 9999996543111111111223468999999996421 2467778999999999999887652 2446899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....... .....|+.+|...+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~~ 160 (261)
T PRK08265 137 SISAKFAQ--------------------------------------------------------TGRWLYPASKAAIRQL 160 (261)
T ss_pred chhhccCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 87543211 1124699999999998
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.. ..++++++++||.+.++...... .... ......... .. ....+...+|+|+++..++
T Consensus 161 ~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~---~~~~---~~~~~~~~~---~~-----p~~r~~~p~dva~~~~~l~ 226 (261)
T PRK08265 161 TRSMAMDLAPDGIRVNSVSPGWTWSRVMDELS---GGDR---AKADRVAAP---FH-----LLGRVGDPEEVAQVVAFLC 226 (261)
T ss_pred HHHHHHHhcccCEEEEEEccCCccChhhhhhc---ccch---hHHHHhhcc---cC-----CCCCccCHHHHHHHHHHHc
Confidence 8765 35899999999988664321100 0000 000010000 00 1122457899999999988
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
..... .-.+..+.+.++
T Consensus 227 s~~~~-~~tG~~i~vdgg 243 (261)
T PRK08265 227 SDAAS-FVTGADYAVDGG 243 (261)
T ss_pred Ccccc-CccCcEEEECCC
Confidence 63222 222667777765
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=143.13 Aligned_cols=210 Identities=13% Similarity=0.126 Sum_probs=134.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||||+||++++++|+++| .+|.+..|+.... +...+++ .. .+.++.++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~~~~ 56 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEGG---EETLKLL---------RE---------AGGDGFYQRC 56 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEEEEc
Confidence 589999999999999999999999 4567777765432 2211111 00 1356788999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
|+++++......+.......++|+|||+||.... .+.++..+++|+.+..++.+.+.+. .+..+||++||
T Consensus 57 D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 136 (270)
T PRK05650 57 DVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIAS 136 (270)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 9996432111111111222469999999997532 1456667889999888887765431 25678999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .....|+.+|+..+.+.
T Consensus 137 ~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 137 MAGLMQG--------------------------------------------------------PAMSSYNVAKAGVVALS 160 (270)
T ss_pred hhhcCCC--------------------------------------------------------CCchHHHHHHHHHHHHH
Confidence 8654421 12357999999987777
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..++++++++||.+.++......... .......... .....++++|+|+.++.++.
T Consensus 161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~~vA~~i~~~l~ 224 (270)
T PRK05650 161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN---PAMKAQVGKL-------------LEKSPITAADIADYIYQQVA 224 (270)
T ss_pred HHHHHHhcccCcEEEEEecCccccCcccccccCc---hhHHHHHHHH-------------hhcCCCCHHHHHHHHHHHHh
Confidence 655 35899999999999876542211100 0000000000 01234789999999999997
Q ss_pred h
Q 015874 318 A 318 (399)
Q Consensus 318 ~ 318 (399)
.
T Consensus 225 ~ 225 (270)
T PRK05650 225 K 225 (270)
T ss_pred C
Confidence 3
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-15 Score=139.74 Aligned_cols=161 Identities=16% Similarity=0.208 Sum_probs=120.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||+++++.|+++|+ .+|.+..|+.++... .+.++.+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~----------------------------~~~~~~~ 53 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVTD----------------------------LGPRVVP 53 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhhh----------------------------cCCceEE
Confidence 5678999999999999999999999995 156888887643211 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccC--------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITK--------FDERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~--------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
+.+|++++ +.+..+. ..+|+|||+|+... ..+.+...+++|+.+..++++++.+. .+..
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (238)
T PRK08264 54 LQLDVTDP-------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG 126 (238)
T ss_pred EEecCCCH-------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 99999963 3333333 35899999999721 12456677899999999999987642 2467
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+|+++||...+... .....|+.+|
T Consensus 127 ~~v~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 150 (238)
T PRK08264 127 AIVNVLSVLSWVNF--------------------------------------------------------PNLGTYSASK 150 (238)
T ss_pred EEEEEcChhhccCC--------------------------------------------------------CCchHhHHHH
Confidence 89999998655421 2235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
...|.+++.+ ..+++++++||+.+.++.
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 9999888765 348999999999987654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=143.83 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=146.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|+++| ..|++..|+.... ++..+++ .. .+.++.+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~ 64 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAA---NHVVDEI---------QQ---------LGGQAFA 64 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 568999999999999999999999999 4567777765432 2222111 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
+.+|+++++..........+...++|++||+||.... .+.++..+++|+.++.++++++... .+..++|++
T Consensus 65 ~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 144 (255)
T PRK06113 65 CRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 8999996442111111111223468999999997532 1456667899999999999998642 134589999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||....... .....|+.+|++.+.
T Consensus 145 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 168 (255)
T PRK06113 145 TSMAAENKN--------------------------------------------------------INMTSYASSKAAASH 168 (255)
T ss_pred ecccccCCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 997533211 123569999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.. ..+++++++.||.+-.+.... ... ..+...... . . ....+...+|++++++.+
T Consensus 169 ~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~---~~~-----~~~~~~~~~-~---~-----~~~~~~~~~d~a~~~~~l 231 (255)
T PRK06113 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VIT-----PEIEQKMLQ-H---T-----PIRRLGQPQDIANAALFL 231 (255)
T ss_pred HHHHHHHHhhhhCeEEEEEeccccccccccc---ccC-----HHHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHH
Confidence 99876 357999999999987654311 000 011111111 0 0 112356889999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+... ...-.+.++++.++
T Consensus 232 ~~~~-~~~~~G~~i~~~gg 249 (255)
T PRK06113 232 CSPA-ASWVSGQILTVSGG 249 (255)
T ss_pred cCcc-ccCccCCEEEECCC
Confidence 8632 21112678888876
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=142.90 Aligned_cols=225 Identities=15% Similarity=0.081 Sum_probs=137.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++|+||||+|+||++++++|+++|++ |.+. .|+.+.. +...+++ .. .+.++.++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~---v~~~~~~~~~~~---~~~~~~~---------~~---------~~~~~~~~~ 57 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYT---VAVNYQQNLHAA---QEVVNLI---------TQ---------AGGKAFVLQ 57 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCChHHH---HHHHHHH---------Hh---------CCCeEEEEE
Confidence 68999999999999999999999954 4543 3433221 1111111 00 124678899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--c----CCceE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--V----KLKVF 157 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~----~~~~~ 157 (399)
+|+++++......+...+....+|+|||+|+.... .+.++..++.|+.++..+++++... . +..+|
T Consensus 58 ~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 58 ADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 99996543111111111123468999999997522 1345678999999998888776542 0 13569
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... .....|+.+|..
T Consensus 138 v~~sS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~~ 162 (247)
T PRK09730 138 VNVSSAASRLGAP-------------------------------------------------------GEYVDYAASKGA 162 (247)
T ss_pred EEECchhhccCCC-------------------------------------------------------CcccchHhHHHH
Confidence 9999975433111 112359999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..+++++++||+.++++..... + . ........... + .....+.+|+|+++
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~-~---~----~~~~~~~~~~~----~-----~~~~~~~~dva~~~ 225 (247)
T PRK09730 163 IDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG-G---E----PGRVDRVKSNI----P-----MQRGGQPEEVAQAI 225 (247)
T ss_pred HHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC-C---C----HHHHHHHHhcC----C-----CCCCcCHHHHHHHH
Confidence 99888755 3589999999999999754210 0 0 01111111111 1 01123689999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... ...+..|.+.++
T Consensus 226 ~~~~~~~~~-~~~g~~~~~~g~ 246 (247)
T PRK09730 226 VWLLSDKAS-YVTGSFIDLAGG 246 (247)
T ss_pred HhhcChhhc-CccCcEEecCCC
Confidence 988863221 122567777654
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=144.68 Aligned_cols=229 Identities=12% Similarity=0.061 Sum_probs=145.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++||||+|+||.++++.|+++| .+|.++.|+.+.. +.+.+.+ .. .+.++.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 62 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQL---DEVAEQI---------RA---------AGRRAH 62 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 3678999999999999999999999999 5568888875332 2211111 00 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|+|||+|+.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 63 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i 142 (263)
T PRK07814 63 VVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSV 142 (263)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEE
Confidence 89999996442111111111223478999999986421 2457778999999999999998652 245789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.+|++
T Consensus 143 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 166 (263)
T PRK07814 143 INISSTMGRLAG--------------------------------------------------------RGFAAYGTAKAA 166 (263)
T ss_pred EEEccccccCCC--------------------------------------------------------CCCchhHHHHHH
Confidence 999986432210 223579999999
Q ss_pred HHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 238 GEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 238 ~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+.+++.+ ..+++++.++||.+.++.... .... . . +.....+.. ........+|+|++++
T Consensus 167 ~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~---~~~~-~---~-~~~~~~~~~--------~~~~~~~~~~va~~~~ 230 (263)
T PRK07814 167 LAHYTRLAALDLCPRIRVNAIAPGSILTSALEV---VAAN-D---E-LRAPMEKAT--------PLRRLGDPEDIAAAAV 230 (263)
T ss_pred HHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh---ccCC-H---H-HHHHHHhcC--------CCCCCcCHHHHHHHHH
Confidence 99998876 236899999999887643211 0000 0 1 111111110 1123467899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... ....+..+.+.++
T Consensus 231 ~l~~~~~-~~~~g~~~~~~~~ 250 (263)
T PRK07814 231 YLASPAG-SYLTGKTLEVDGG 250 (263)
T ss_pred HHcCccc-cCcCCCEEEECCC
Confidence 9886322 2222566766554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=144.14 Aligned_cols=227 Identities=13% Similarity=0.088 Sum_probs=145.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||.+++++|+++|+ +|.+..|+.+.. +...+++ .. .+.++.+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~ 62 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHLDAL---EKLADEI---------GT---------SGGKVVP 62 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHHH---HHHHHHH---------Hh---------cCCeEEE
Confidence 6789999999999999999999999994 567777765432 2222211 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cC--CceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VK--LKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~--~~~~v 158 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+++++.+. ++ ..+++
T Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 142 (253)
T PRK05867 63 VCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII 142 (253)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence 8999997543221122222233579999999997532 2456777899999999999987653 11 24688
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||........ ......|+.+|.+.
T Consensus 143 ~~sS~~~~~~~~------------------------------------------------------~~~~~~Y~asKaal 168 (253)
T PRK05867 143 NTASMSGHIINV------------------------------------------------------PQQVSHYCASKAAV 168 (253)
T ss_pred EECcHHhcCCCC------------------------------------------------------CCCccchHHHHHHH
Confidence 888764221000 01124699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..|+++..++||.|-++.....+ ........ . .+ ...+...+|+|++++
T Consensus 169 ~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~----------~~~~~~~~-~---~~-----~~r~~~p~~va~~~~ 229 (253)
T PRK05867 169 IHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT----------EYQPLWEP-K---IP-----LGRLGRPEELAGLYL 229 (253)
T ss_pred HHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch----------HHHHHHHh-c---CC-----CCCCcCHHHHHHHHH
Confidence 9999876 45899999999999665431110 11111111 1 11 123567899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... ..-.+..+.+.++
T Consensus 230 ~L~s~~~-~~~tG~~i~vdgG 249 (253)
T PRK05867 230 YLASEAS-SYMTGSDIVIDGG 249 (253)
T ss_pred HHcCccc-CCcCCCeEEECCC
Confidence 9886322 2222667777765
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=144.67 Aligned_cols=235 Identities=13% Similarity=0.099 Sum_probs=146.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++||||+|+||++++++|+++| ++|.++.|+.+.. +...+++. . .+.++.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~---------~---------~~~~~~ 62 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEKA---EAVVAEIK---------A---------AGGEAL 62 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHH---------h---------cCCeEE
Confidence 3678999999999999999999999999 4568888865332 22221110 0 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------------------cccHHHHHHHhHHHHHHHHH
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------------DERYDVAFGINTLGVIHLVN 146 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------------------~~~~~~~~~~n~~~~~~ll~ 146 (399)
++++|+++++......+.....+.++|++||+|+.... .+.+...+++|+.+...+++
T Consensus 63 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 142 (278)
T PRK08277 63 AVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ 142 (278)
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 89999996542111111111223579999999995321 23467788999999988877
Q ss_pred HHHhc---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 147 FAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 147 ~a~~~---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
++.+. .+..+||++||...+...
T Consensus 143 ~~~~~~~~~~~g~ii~isS~~~~~~~------------------------------------------------------ 168 (278)
T PRK08277 143 VFAKDMVGRKGGNIINISSMNAFTPL------------------------------------------------------ 168 (278)
T ss_pred HHHHHHHhcCCcEEEEEccchhcCCC------------------------------------------------------
Confidence 65442 245789999998765432
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
.....|+.+|.+.+.+++.+ ..++++..++||.|.++....+...... ........... . ..
T Consensus 169 --~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~-~--------~p 235 (278)
T PRK08277 169 --TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG--SLTERANKILA-H--------TP 235 (278)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc--cchhHHHHHhc-c--------CC
Confidence 11346999999999988766 4589999999999988753211000000 00000111111 0 11
Q ss_pred ccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 299 ~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..-+...+|+|++++.++.......-.+..+.+.++
T Consensus 236 ~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 236 MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 223566789999999987631222212566777665
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=142.55 Aligned_cols=226 Identities=19% Similarity=0.172 Sum_probs=152.3
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|+||||.+|+++++.|++.+ +.|.+++|+.... ..+.+++ ..++.+.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~~-~~~~l~~------------------------~g~~vv~~d~ 52 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSSD-RAQQLQA------------------------LGAEVVEADY 52 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHHH-HHHHHHH------------------------TTTEEEES-T
T ss_pred CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccchh-hhhhhhc------------------------ccceEeeccc
Confidence 7999999999999999999987 6679999988332 2222222 5678889999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCccc
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~~~ 174 (399)
. +.+.+.+.++++|+||.+.+... ........+++++|++. ++++||+.|....+....+
T Consensus 53 ~-------~~~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--- 112 (233)
T PF05368_consen 53 D-------DPESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--- 112 (233)
T ss_dssp T--------HHHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---
T ss_pred C-------CHHHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEEeccccccccc---
Confidence 9 66777789999999998877543 11234567899999997 7999997554433321110
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEEEE
Q 015874 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLVII 254 (399)
Q Consensus 175 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~i~ 254 (399)
..+...+...|...|..+++ .+++++++
T Consensus 113 --------------------------------------------------~~p~~~~~~~k~~ie~~l~~--~~i~~t~i 140 (233)
T PF05368_consen 113 --------------------------------------------------SEPEIPHFDQKAEIEEYLRE--SGIPYTII 140 (233)
T ss_dssp --------------------------------------------------STTHHHHHHHHHHHHHHHHH--CTSEBEEE
T ss_pred --------------------------------------------------ccccchhhhhhhhhhhhhhh--ccccceec
Confidence 01112355678888988887 49999999
Q ss_pred ecCceecCCCCCCCCcccCcchHHHHHHHhhcCc-cccccCCCccccCee-eHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVI-PVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 255 Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i-~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
|+|..+......+..+. ...... ...+++++.....++ ..+|+++++..++..+... ..++.+.++
T Consensus 141 ~~g~f~e~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~-~~~~~~~~~ 208 (233)
T PF05368_consen 141 RPGFFMENLLPPFAPVV-----------DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH-NNGKTIFLA 208 (233)
T ss_dssp EE-EEHHHHHTTTHHTT-----------CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT-TEEEEEEEG
T ss_pred cccchhhhhhhhhcccc-----------cccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh-cCCEEEEeC
Confidence 99976653321111000 011111 224455655556664 9999999999999853332 125788887
Q ss_pred CCCCCcccHHHHHHHHHHhhccC
Q 015874 333 SSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
+ +.+|..|+++.+.+.+|++
T Consensus 209 ~---~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 209 G---ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp G---GEEEHHHHHHHHHHHHTSE
T ss_pred C---CCCCHHHHHHHHHHHHCCc
Confidence 6 4589999999999999874
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=141.81 Aligned_cols=233 Identities=17% Similarity=0.198 Sum_probs=148.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++|++ .|.++.|+.+... +..+.+ . ..+.++.+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~~~---~~~~~l---------~---------~~~~~~~~ 60 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEKGE---AQAAEL---------E---------ALGAKAVF 60 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHHHH---HHHHHH---------H---------hcCCeEEE
Confidence 67899999999999999999999999954 1678888643321 111111 0 01346788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c-CCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V-KLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~-~~~~~v 158 (399)
+.+|+++++......+.......++|+|||+|+.... .+.++..+++|+.+..++++++.+. . ...++|
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 140 (260)
T PRK06198 61 VQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIV 140 (260)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 9999996543111111111122468999999997531 2445677899999999999887653 1 135799
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...++... ....|+.+|...
T Consensus 141 ~~ss~~~~~~~~--------------------------------------------------------~~~~Y~~sK~a~ 164 (260)
T PRK06198 141 NIGSMSAHGGQP--------------------------------------------------------FLAAYCASKGAL 164 (260)
T ss_pred EECCcccccCCC--------------------------------------------------------CcchhHHHHHHH
Confidence 999987665321 125699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
|.+.+.+ ..+++++.++|+.+.++..... ..+.. ....+...... ......+++.+|+|+++
T Consensus 165 ~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~ 232 (260)
T PRK06198 165 ATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHG---APDDWLEKAAA---------TQPFGRLLDPDEVARAV 232 (260)
T ss_pred HHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccC---CChHHHHHHhc---------cCCccCCcCHHHHHHHH
Confidence 9988865 3579999999999988753110 00000 00011111110 11133467899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++.... ....++++.+.++
T Consensus 233 ~~l~~~~~-~~~~G~~~~~~~~ 253 (260)
T PRK06198 233 AFLLSDES-GLMTGSVIDFDQS 253 (260)
T ss_pred HHHcChhh-CCccCceEeECCc
Confidence 99886332 2222678888775
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-15 Score=141.64 Aligned_cols=226 Identities=13% Similarity=0.099 Sum_probs=143.0
Q ss_pred cCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCccc--------HHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDS--------AALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 10 ~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
+.+++|+|||||| .||.+++++|+++|+ .|.++.|+..... ....+.+++ .
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~------- 63 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVLLKEEI---------E------- 63 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHHHHHHH---------H-------
Confidence 4678999999996 699999999999994 5678888732110 000011111 0
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
..+.+++++.+|+++++......+...+.+..+|+|||+||.... .+.++..+++|+.++..+++++.+.
T Consensus 64 --~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 141 (256)
T PRK12748 64 --SYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQY 141 (256)
T ss_pred --hcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 012468899999997543221122222223568999999987532 1346777899999999999987642
Q ss_pred --cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 015874 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (399)
Q Consensus 152 --~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
....+||++||...+.... ...
T Consensus 142 ~~~~~~~iv~~ss~~~~~~~~--------------------------------------------------------~~~ 165 (256)
T PRK12748 142 DGKAGGRIINLTSGQSLGPMP--------------------------------------------------------DEL 165 (256)
T ss_pred hhcCCeEEEEECCccccCCCC--------------------------------------------------------Cch
Confidence 1346899999986554211 124
Q ss_pred hhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeee
Q 015874 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (399)
Q Consensus 230 ~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 304 (399)
.|+.+|++.+.+++.+ ..+++++.++||.+..+... . ........ ..+. ..+..
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~------~------~~~~~~~~----~~~~-----~~~~~ 224 (256)
T PRK12748 166 AYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT------E------ELKHHLVP----KFPQ-----GRVGE 224 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC------h------hHHHhhhc----cCCC-----CCCcC
Confidence 6999999999998765 35899999999987654321 0 00111110 1111 12345
Q ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 305 v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+|+|+++..++..... .-.+.++++.++
T Consensus 225 ~~~~a~~~~~l~~~~~~-~~~g~~~~~d~g 253 (256)
T PRK12748 225 PVDAARLIAFLVSEEAK-WITGQVIHSEGG 253 (256)
T ss_pred HHHHHHHHHHHhCcccc-cccCCEEEecCC
Confidence 68999999887753221 112678888765
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=140.85 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=143.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||+++++.|+++|+ ++.+..|+... ..+...+.+ .. .+.++.+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~---~v~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 59 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAGSAA--AADELVAEI---------EA---------AGGRAIA 59 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCCHH--HHHHHHHHH---------Hh---------cCCeEEE
Confidence 4678999999999999999999999995 44555555422 111111111 00 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.+|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++.+.+. ....+++++|
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 139 (245)
T PRK12937 60 VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLS 139 (245)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEe
Confidence 9999996432111111111223478999999997532 2456777899999999999888653 2345899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... +....|+.+|...+.+
T Consensus 140 s~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 163 (245)
T PRK12937 140 TSVIALPL--------------------------------------------------------PGYGPYAASKAAVEGL 163 (245)
T ss_pred eccccCCC--------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 87543321 1235799999999998
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++.+ ..++++++++||.+-++.... . .. .......... . ...-+.+.+|+|+++..++
T Consensus 164 ~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~-~---~~----~~~~~~~~~~-~--------~~~~~~~~~d~a~~~~~l~ 226 (245)
T PRK12937 164 VHVLANELRGRGITVNAVAPGPVATELFFN-G---KS----AEQIDQLAGL-A--------PLERLGTPEEIAAAVAFLA 226 (245)
T ss_pred HHHHHHHhhhcCeEEEEEEeCCccCchhcc-c---CC----HHHHHHHHhc-C--------CCCCCCCHHHHHHHHHHHc
Confidence 8765 357999999999876643100 0 00 0111111111 0 1122446789999988888
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
.. ....-.+.++++.++
T Consensus 227 ~~-~~~~~~g~~~~~~~g 243 (245)
T PRK12937 227 GP-DGAWVNGQVLRVNGG 243 (245)
T ss_pred Cc-cccCccccEEEeCCC
Confidence 53 222222678888664
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=142.58 Aligned_cols=230 Identities=14% Similarity=0.117 Sum_probs=146.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||++++++|+++| ++|.+..|+.... .+...+.+ .. .+.++.+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~~--~~~~~~~l---------~~---------~~~~~~~ 62 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDDG--LAETAEHI---------EA---------AGRRAIQ 62 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcchH--HHHHHHHH---------Hh---------cCCceEE
Confidence 678999999999999999999999999 4567888865321 12221111 00 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|++||+||.... .+.++..+++|+.++..+++++.+. .+..++|+
T Consensus 63 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 63 IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 9999997543211112222223568999999997532 2457788999999999888876542 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+.+....+ .....|+.+|++.+
T Consensus 143 isS~~~~~~~~~------------------------------------------------------~~~~~Y~~sKaa~~ 168 (254)
T PRK06114 143 IASMSGIIVNRG------------------------------------------------------LLQAHYNASKAGVI 168 (254)
T ss_pred ECchhhcCCCCC------------------------------------------------------CCcchHHHHHHHHH
Confidence 998753321110 11256999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..|+++.+++||.|.++.... +... ........ . .+ ..-+...+|+|+.++.
T Consensus 169 ~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~~-------~~~~~~~~-~---~p-----~~r~~~~~dva~~~~~ 231 (254)
T PRK06114 169 HLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEMV-------HQTKLFEE-Q---TP-----MQRMAKVDEMVGPAVF 231 (254)
T ss_pred HHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccch-------HHHHHHHh-c---CC-----CCCCcCHHHHHHHHHH
Confidence 888766 458999999999997764311 1000 01111111 1 01 1124567999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++... ..--.+.++.+.++
T Consensus 232 l~s~~-~~~~tG~~i~~dgg 250 (254)
T PRK06114 232 LLSDA-ASFCTGVDLLVDGG 250 (254)
T ss_pred HcCcc-ccCcCCceEEECcC
Confidence 88632 22223667777665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=142.37 Aligned_cols=229 Identities=13% Similarity=0.115 Sum_probs=145.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++|+||||+|+||.+++++|+++| .+|..+.|+.... +.+.+++ .+ .+.++.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 60 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDGC---QAVADAI---------VA---------AGGKAE 60 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 3678999999999999999999999999 4567888864322 2222211 00 124577
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++++|+++.+......+...+.+.++|+|||+|+.... .+.++..++.|+.+...+++++.+. .+..++
T Consensus 61 ~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (252)
T PRK07035 61 ALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSI 140 (252)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEE
Confidence 88999996542111111111223468999999986421 2346678999999999988877542 245789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
+++||...+... .....|+.+|++
T Consensus 141 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 164 (252)
T PRK07035 141 VNVASVNGVSPG--------------------------------------------------------DFQGIYSITKAA 164 (252)
T ss_pred EEECchhhcCCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999987433211 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..|++++.+.||.|..+.... +... ......... . . ....+...+|+|+++
T Consensus 165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~---~~~~----~~~~~~~~~-~---~-----~~~~~~~~~~va~~~ 228 (252)
T PRK07035 165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASA---LFKN----DAILKQALA-H---I-----PLRRHAEPSEMAGAV 228 (252)
T ss_pred HHHHHHHHHHHHhhcCEEEEEEeeccccCccccc---ccCC----HHHHHHHHc-c---C-----CCCCcCCHHHHHHHH
Confidence 99999876 458999999999986654311 1111 011111111 1 1 112355678999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++...... -.+.++.+.++
T Consensus 229 ~~l~~~~~~~-~~g~~~~~dgg 249 (252)
T PRK07035 229 LYLASDASSY-TTGECLNVDGG 249 (252)
T ss_pred HHHhCccccC-ccCCEEEeCCC
Confidence 9988643222 12567777654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=144.16 Aligned_cols=198 Identities=12% Similarity=0.113 Sum_probs=132.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||+++++.|+++|+ +|.++.|+.+.. +++.+.+ . . ..++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~~~-------------~----~--~~~~~~~~ 56 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRTDAL---QAFAARL-------------P----K--AARVSVYA 56 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHhc-------------c----c--CCeeEEEE
Confidence 47999999999999999999999994 568888864322 2222111 0 0 12688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
+|+++++...+..+...+....+|++||+||.... .+.++..+++|+.++..+++.+... .+..+||++
T Consensus 57 ~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~i 136 (257)
T PRK07024 57 ADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGI 136 (257)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99996543211111111222358999999997431 1456778999999999988754321 245789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 137 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 160 (257)
T PRK07024 137 ASVAGVRGL--------------------------------------------------------PGAGAYSASKAAAIK 160 (257)
T ss_pred echhhcCCC--------------------------------------------------------CCCcchHHHHHHHHH
Confidence 887543211 113469999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.. ..+++++++|||.|.++.... . .. . ....+..+++|+.++.+
T Consensus 161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---------------------~--~~-~----~~~~~~~~~~a~~~~~~ 212 (257)
T PRK07024 161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAH---------------------N--PY-P----MPFLMDADRFAARAARA 212 (257)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCcCchhhc---------------------C--CC-C----CCCccCHHHHHHHHHHH
Confidence 88765 458999999999998754210 0 00 0 01135789999999998
Q ss_pred HHh
Q 015874 316 MVA 318 (399)
Q Consensus 316 ~~~ 318 (399)
+.+
T Consensus 213 l~~ 215 (257)
T PRK07024 213 IAR 215 (257)
T ss_pred HhC
Confidence 863
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-15 Score=141.97 Aligned_cols=220 Identities=15% Similarity=0.061 Sum_probs=144.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||++++++|+++| +.|.++.|+.+.. . ...++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~~-----~------------------------~~~~~~~ 51 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPET-----V------------------------DGRPAEF 51 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhhh-----h------------------------cCCceEE
Confidence 678999999999999999999999999 4568888875320 0 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~v 158 (399)
+++|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++++.+. .+..+||
T Consensus 52 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii 131 (252)
T PRK07856 52 HAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131 (252)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999996432111111111223468999999986431 2456778999999999999987652 1346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 132 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 155 (252)
T PRK07856 132 NIGSVSGRRPS--------------------------------------------------------PGTAAYGAAKAGL 155 (252)
T ss_pred EEcccccCCCC--------------------------------------------------------CCCchhHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 239 EMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 239 E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+.+++.. ...+++..++||.|.++...... .. ......... . . ....+...+|+|++++.
T Consensus 156 ~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~---~~----~~~~~~~~~-~---~-----~~~~~~~p~~va~~~~~ 219 (252)
T PRK07856 156 LNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHY---GD----AEGIAAVAA-T---V-----PLGRLATPADIAWACLF 219 (252)
T ss_pred HHHHHHHHHHhcCCeEEEEEEeccccChHHhhhc---cC----HHHHHHHhh-c---C-----CCCCCcCHHHHHHHHHH
Confidence 9999876 22389999999998775431100 00 001111111 0 1 11234577999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.... ..-.+..+.+.++
T Consensus 220 L~~~~~-~~i~G~~i~vdgg 238 (252)
T PRK07856 220 LASDLA-SYVSGANLEVHGG 238 (252)
T ss_pred HcCccc-CCccCCEEEECCC
Confidence 886322 2222678888777
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.1e-15 Score=137.03 Aligned_cols=214 Identities=11% Similarity=0.061 Sum_probs=140.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|+++| ++|.++.|+.... ....+
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~--------------------------------~~~~~ 45 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD--------------------------------FPGEL 45 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc--------------------------------cCceE
Confidence 357899999999999999999999999 5668888876431 11246
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
+.+|+++++.. .+....+.+ ++|+|||+|+.... .+.+...+++|+.+..++.+++.+. .+..++
T Consensus 46 ~~~D~~~~~~~---~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 122 (234)
T PRK07577 46 FACDLADIEQT---AATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRI 122 (234)
T ss_pred EEeeCCCHHHH---HHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 78999964321 111212211 58999999997542 2456667889999998888776542 245789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||.++++.. ....|+.+|..
T Consensus 123 v~~sS~~~~~~~---------------------------------------------------------~~~~Y~~sK~a 145 (234)
T PRK07577 123 VNICSRAIFGAL---------------------------------------------------------DRTSYSAAKSA 145 (234)
T ss_pred EEEccccccCCC---------------------------------------------------------CchHHHHHHHH
Confidence 999998766531 13569999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.|.+++.+ ..+++++++|||.+.++...... .. ........... . ....+...+|+|.++
T Consensus 146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---~~---~~~~~~~~~~~-------~--~~~~~~~~~~~a~~~ 210 (234)
T PRK07577 146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQTR---PV---GSEEEKRVLAS-------I--PMRRLGTPEEVAAAI 210 (234)
T ss_pred HHHHHHHHHHHHHhhCcEEEEEecCcccCccccccc---cc---chhHHHHHhhc-------C--CCCCCcCHHHHHHHH
Confidence 99888765 45899999999999875431000 00 00001111110 0 111244678999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+.+.++
T Consensus 211 ~~l~~~~~~-~~~g~~~~~~g~ 231 (234)
T PRK07577 211 AFLLSDDAG-FITGQVLGVDGG 231 (234)
T ss_pred HHHhCcccC-CccceEEEecCC
Confidence 998864322 112567777665
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=141.88 Aligned_cols=225 Identities=10% Similarity=0.046 Sum_probs=143.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+||||+|+||.+++++|+++|+ +|.++.|+.... .++..+++ +. .+.++.++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~---~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~~~ 58 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF---DIGITWHSDEEG--AKETAEEV---------RS---------HGVRAEIRQ 58 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCChHH--HHHHHHHH---------Hh---------cCCceEEEE
Confidence 57899999999999999999999995 456665543221 12222111 00 135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--c--CCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--V--KLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~--~~~~~v~~ 160 (399)
+|+++++......+.....+..+|+|||+||.... .+.+...+++|+.+...+++++.+. . +..++|++
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 59 LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99997543221122222233568999999997532 2456778999999999999987653 1 23589999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...... ......|+.+|.+.+.
T Consensus 139 sS~~~~~~--------------------------------------------------------~~~~~~Y~~sK~a~~~ 162 (256)
T PRK12743 139 TSVHEHTP--------------------------------------------------------LPGASAYTAAKHALGG 162 (256)
T ss_pred eeccccCC--------------------------------------------------------CCCcchhHHHHHHHHH
Confidence 98742211 1223579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.. ..+++++.++||.+.++..... .. ........ ..+ ...+.+.+|+|.++..+
T Consensus 163 l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~----~~-----~~~~~~~~----~~~-----~~~~~~~~dva~~~~~l 224 (256)
T PRK12743 163 LTKAMALELVEHGILVNAVAPGAIATPMNGMD----DS-----DVKPDSRP----GIP-----LGRPGDTHEIASLVAWL 224 (256)
T ss_pred HHHHHHHHhhhhCeEEEEEEeCCccCcccccc----Ch-----HHHHHHHh----cCC-----CCCCCCHHHHHHHHHHH
Confidence 88765 4579999999999988653210 00 00111111 111 11235779999999888
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.... ..-.+.++.+.++
T Consensus 225 ~~~~~-~~~~G~~~~~dgg 242 (256)
T PRK12743 225 CSEGA-SYTTGQSLIVDGG 242 (256)
T ss_pred hCccc-cCcCCcEEEECCC
Confidence 75322 2112667777665
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=142.15 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=142.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+++||||+|+||.++++.|+++| .+|.++.|+.+... +..+++ . ..+.++.+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~~~---~~~~~~---------~---------~~~~~~~~~~ 57 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEETAQ---AAADKL---------S---------KDGGKAIAVK 57 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------H---------hcCCeEEEEE
Confidence 6899999999999999999999999 55688888754322 221111 0 0124678899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~v~~ 160 (399)
+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++.+.+. ....++|++
T Consensus 58 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 58 ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99997543221122222223468999999986432 2456778899999998888777642 123578999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 138 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 161 (256)
T PRK08643 138 TSQAGVVGN--------------------------------------------------------PELAVYSSTKFAVRG 161 (256)
T ss_pred CccccccCC--------------------------------------------------------CCCchhHHHHHHHHH
Confidence 887533211 112469999999988
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCC-cccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+++.. ..|++++.++||.+.++....... ..........+........ . ....+...+|+|.++..
T Consensus 162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~va~~~~~ 233 (256)
T PRK08643 162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD---I-----TLGRLSEPEDVANCVSF 233 (256)
T ss_pred HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc---C-----CCCCCcCHHHHHHHHHH
Confidence 88765 458999999999998754310000 0000000000000000000 0 11235678999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... -.+..+.+.++
T Consensus 234 L~~~~~~~-~~G~~i~vdgg 252 (256)
T PRK08643 234 LAGPDSDY-ITGQTIIVDGG 252 (256)
T ss_pred HhCccccC-ccCcEEEeCCC
Confidence 88643221 12567777665
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-15 Score=144.94 Aligned_cols=204 Identities=16% Similarity=0.104 Sum_probs=136.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+++|+||||+|+||.++++.|+++| ++|.++.|+.+.. +...+++. . .+.++.
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~l---~~~~~~l~---------~---------~~~~~~ 92 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDLL---DAVADRIT---------R---------AGGDAM 92 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH---------h---------cCCcEE
Confidence 3567999999999999999999999999 5668888875332 22222110 0 124577
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.+..++++++... .+..+
T Consensus 93 ~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 172 (293)
T PRK05866 93 AVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGH 172 (293)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 89999996543111111111223479999999997532 1344567899999999988876531 25678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||.+++.... .....|+.+|+
T Consensus 173 iv~isS~~~~~~~~-------------------------------------------------------p~~~~Y~asKa 197 (293)
T PRK05866 173 IINVATWGVLSEAS-------------------------------------------------------PLFSVYNASKA 197 (293)
T ss_pred EEEECChhhcCCCC-------------------------------------------------------CCcchHHHHHH
Confidence 99999976543210 11357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+++.. ..++++++++||.|-++...+ . ... .....+..+++|+.
T Consensus 198 al~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~---------------------~-~~~-----~~~~~~~pe~vA~~ 250 (293)
T PRK05866 198 ALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP---------------------T-KAY-----DGLPALTADEAAEW 250 (293)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------------------c-ccc-----cCCCCCCHHHHHHH
Confidence 999888765 458999999999776543210 0 000 01224678999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++.+
T Consensus 251 ~~~~~~~ 257 (293)
T PRK05866 251 MVTAART 257 (293)
T ss_pred HHHHHhc
Confidence 9999974
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.2e-15 Score=137.73 Aligned_cols=226 Identities=19% Similarity=0.224 Sum_probs=144.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.+++|+||||||+||+++++.|+++|+ +|..+ .|+.... +...+.+ .. .+.++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~---~v~~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 58 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDINEEAA---QELLEEI---------KE---------EGGDAI 58 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 5678999999999999999999999994 45666 6664332 1111111 00 134688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.+..++++.+... .+.++||
T Consensus 59 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (247)
T PRK05565 59 AVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV 138 (247)
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999996432111111111112379999999997532 2456778999999999998887653 2456799
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 139 ~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK~a~ 162 (247)
T PRK05565 139 NISSIWGLIGA--------------------------------------------------------SCEVLYSASKGAV 162 (247)
T ss_pred EECCHhhccCC--------------------------------------------------------CCccHHHHHHHHH
Confidence 99987544321 1124699999988
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.. ..+++++++|||.+-++...... . ........ . .....+...+|++++++
T Consensus 163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~------~~~~~~~~----~-----~~~~~~~~~~~va~~~~ 224 (247)
T PRK05565 163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---E------EDKEGLAE----E-----IPLGRLGKPEEIAKVVL 224 (247)
T ss_pred HHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---h------HHHHHHHh----c-----CCCCCCCCHHHHHHHHH
Confidence 8877765 45899999999998765432110 0 00111100 0 11234568899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++........ ++.+++.++
T Consensus 225 ~l~~~~~~~~~-g~~~~~~~~ 244 (247)
T PRK05565 225 FLASDDASYIT-GQIITVDGG 244 (247)
T ss_pred HHcCCccCCcc-CcEEEecCC
Confidence 98864332222 677777665
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=142.97 Aligned_cols=225 Identities=11% Similarity=0.100 Sum_probs=141.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++|++ |....|+... ..+.+... ...++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~---vv~~~~~~~~--~~~~~~~~---------------------~~~~~~~ 56 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGAR---VVVNYHQSED--AAEALADE---------------------LGDRAIA 56 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCe---EEEEcCCCHH--HHHHHHHH---------------------hCCceEE
Confidence 45789999999999999999999999954 4554443221 11221111 1246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcC-ccEEEEcccccC---------c----cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~-~D~Vih~Aa~~~---------~----~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
+++|+++++......+...+.... +|++||+|+... . .+.+...+++|+.+..++++++.+. .
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (253)
T PRK08642 57 LQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ 136 (253)
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence 999999644211111111122234 999999998521 1 1345677999999999999988642 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+++++||...... ..+.+.|+
T Consensus 137 ~~g~iv~iss~~~~~~--------------------------------------------------------~~~~~~Y~ 160 (253)
T PRK08642 137 GFGRIINIGTNLFQNP--------------------------------------------------------VVPYHDYT 160 (253)
T ss_pred CCeEEEEECCccccCC--------------------------------------------------------CCCccchH
Confidence 4568999998642211 12235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|.+.|.+++.+ ..++++..++||.+..+.... ... ...... ..... ....+.+.+|
T Consensus 161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~---~~~-----~~~~~~-~~~~~--------~~~~~~~~~~ 223 (253)
T PRK08642 161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA---ATP-----DEVFDL-IAATT--------PLRKVTTPQE 223 (253)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc---cCC-----HHHHHH-HHhcC--------CcCCCCCHHH
Confidence 9999999999876 457999999999887643210 000 011111 11111 1134788899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+++..++... ...-.|..+.+.++
T Consensus 224 va~~~~~l~~~~-~~~~~G~~~~vdgg 249 (253)
T PRK08642 224 FADAVLFFASPW-ARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHHHHcCch-hcCccCCEEEeCCC
Confidence 999999988632 22223677777765
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-15 Score=148.46 Aligned_cols=209 Identities=13% Similarity=0.129 Sum_probs=138.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+++|+||||+|+||++++++|+++| .+|.+..|+.+.. +.+.+++ ++ .+.++.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~l---~~~~~~~---------~~---------~g~~~~ 59 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEAL---QAVAEEC---------RA---------LGAEVL 59 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4678999999999999999999999999 4567888875432 2222211 00 134677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+...++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++|
T Consensus 60 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV 139 (330)
T PRK06139 60 VVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFI 139 (330)
T ss_pred EEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 88999996543222222222223578999999996532 2456778999999999998877542 2446899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... +....|+.+|...
T Consensus 140 ~isS~~~~~~~--------------------------------------------------------p~~~~Y~asKaal 163 (330)
T PRK06139 140 NMISLGGFAAQ--------------------------------------------------------PYAAAYSASKFGL 163 (330)
T ss_pred EEcChhhcCCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99987644321 1235799999987
Q ss_pred HHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 239 EMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
+.+.+.. . .+++++.+.||.|.++..... .. . .+. ........++.+|+|+++
T Consensus 164 ~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~----~~----------~-~~~------~~~~~~~~~~pe~vA~~i 222 (330)
T PRK06139 164 RGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG----AN----------Y-TGR------RLTPPPPVYDPRRVAKAV 222 (330)
T ss_pred HHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc----cc----------c-ccc------cccCCCCCCCHHHHHHHH
Confidence 7766654 2 379999999999987643110 00 0 000 001122457899999999
Q ss_pred HHHHHh
Q 015874 313 IVAMVA 318 (399)
Q Consensus 313 ~~~~~~ 318 (399)
+.++..
T Consensus 223 l~~~~~ 228 (330)
T PRK06139 223 VRLADR 228 (330)
T ss_pred HHHHhC
Confidence 999873
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=149.35 Aligned_cols=209 Identities=17% Similarity=0.223 Sum_probs=138.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++|+||||+|+||.+++++|+++| .+|.++.|+.+.. +...+++ .. .+.++.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~l---~~~~~~l---------~~---------~g~~~~ 60 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEGL---EALAAEI---------RA---------AGGEAL 60 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------HH---------cCCcEE
Confidence 4678999999999999999999999999 4568888875432 2222211 00 135688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+..+|++||+|+...+ .+.++..+++|+.+..++++.+.+. .+..+||
T Consensus 61 ~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV 140 (334)
T PRK07109 61 AVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAII 140 (334)
T ss_pred EEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 89999997543221112222223579999999996432 2456777899988888877666542 2457899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... ....|+.+|...
T Consensus 141 ~isS~~~~~~~~--------------------------------------------------------~~~~Y~asK~a~ 164 (334)
T PRK07109 141 QVGSALAYRSIP--------------------------------------------------------LQSAYCAAKHAI 164 (334)
T ss_pred EeCChhhccCCC--------------------------------------------------------cchHHHHHHHHH
Confidence 999997665321 135699999998
Q ss_pred HHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.. ..++++++++||.|.++... + ...... ........++..+|+|++
T Consensus 165 ~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~----~----------~~~~~~-------~~~~~~~~~~~pe~vA~~ 223 (334)
T PRK07109 165 RGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD----W----------ARSRLP-------VEPQPVPPIYQPEVVADA 223 (334)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh----h----------hhhhcc-------ccccCCCCCCCHHHHHHH
Confidence 8887654 13699999999998764320 0 000000 001112346788999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++..
T Consensus 224 i~~~~~~ 230 (334)
T PRK07109 224 ILYAAEH 230 (334)
T ss_pred HHHHHhC
Confidence 9999973
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-16 Score=149.76 Aligned_cols=183 Identities=15% Similarity=0.112 Sum_probs=121.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||||+||.+++++|+++| ++|.+++|+.+.. +...+++ .++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~~~---~~~~~~l----------------------~~v~~ 75 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPDVA---REALAGI----------------------DGVEV 75 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh----------------------hhCeE
Confidence 578999999999999999999999999 4568888875432 1111111 24778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+.+|+++.+......+.......++|+|||+||.... .+.++..+++|+.++..+++.+... .+..++|++|
T Consensus 76 ~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS 155 (315)
T PRK06196 76 VMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALS 155 (315)
T ss_pred EEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 9999996432111111111122469999999997532 2456788999999988887765542 2346899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|.+..... ......... .+..+...|+.||.+.+.+
T Consensus 156 S~~~~~~~---~~~~~~~~~-----------------------------------------~~~~~~~~Y~~SK~a~~~~ 191 (315)
T PRK06196 156 SAGHRRSP---IRWDDPHFT-----------------------------------------RGYDKWLAYGQSKTANALF 191 (315)
T ss_pred CHHhccCC---CCccccCcc-----------------------------------------CCCChHHHHHHHHHHHHHH
Confidence 97543211 111100000 0112235799999999988
Q ss_pred HHHh-----hCCCcEEEEecCceecCCC
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
.+.. ..|+++++++||.|.++..
T Consensus 192 ~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 192 AVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 8655 3589999999999988754
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-15 Score=139.85 Aligned_cols=231 Identities=15% Similarity=0.191 Sum_probs=148.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+++||||+|+||+++++.|+++| .+|.++.|+.+.. +...+++ ... ..+.++.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~l---------~~~-------~~~~~~~ 63 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADAL---AQARDEL---------AEE-------FPEREVH 63 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHH---------Hhh-------CCCCeEE
Confidence 3678999999999999999999999999 4568888865322 2222211 100 0125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+.....+.++|+|||+||.... .+.++..+.+|+.++.++++++.+. .+..++|
T Consensus 64 ~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 143 (257)
T PRK09242 64 GLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIV 143 (257)
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEE
Confidence 89999997543211122222234578999999996421 2567778999999999999887642 2457899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+... .....|+.+|...
T Consensus 144 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 167 (257)
T PRK09242 144 NIGSVSGLTHV--------------------------------------------------------RSGAPYGMTKAAL 167 (257)
T ss_pred EECccccCCCC--------------------------------------------------------CCCcchHHHHHHH
Confidence 99998655422 1235699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.. ..+++++.++||.|.++.... +... ..+........ ...-+...+|++.++.
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~----~~~~~~~~~~~---------~~~~~~~~~~va~~~~ 231 (257)
T PRK09242 168 LQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSD----PDYYEQVIERT---------PMRRVGEPEEVAAAVA 231 (257)
T ss_pred HHHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCC----hHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence 9988865 458999999999998865421 1111 01111111110 1112445789999998
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+.+.++
T Consensus 232 ~l~~~~~~-~~~g~~i~~~gg 251 (257)
T PRK09242 232 FLCMPAAS-YITGQCIAVDGG 251 (257)
T ss_pred HHhCcccc-cccCCEEEECCC
Confidence 88853221 112567777654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=139.71 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=131.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+||||||+||++++++|+++| .+|.++.|+.... +.+.+ . ..++.++.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~~-------------~---------~~~~~~~~ 52 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQSVL---DELHT-------------Q---------SANIFTLA 52 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCHHHH---HHHHH-------------h---------cCCCeEEE
Confidence 3689999999999999999999999 5568888864321 11111 0 14678899
Q ss_pred ccCCCCCCCCCchhhHHHHhc----CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~----~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
+|++++ +....+.+ .+|.+||+||.... .+.++..+++|+.++.++++++.+. .+..++|+
T Consensus 53 ~D~~~~-------~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 125 (240)
T PRK06101 53 FDVTDH-------PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI 125 (240)
T ss_pred eeCCCH-------HHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence 999963 33333333 46899999986422 2346678999999999999998763 23457888
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||.. .++. .....|+.+|...
T Consensus 126 isS~~~~~~~---------------------------------------------------------~~~~~Y~asK~a~ 148 (240)
T PRK06101 126 VGSIASELAL---------------------------------------------------------PRAEAYGASKAAV 148 (240)
T ss_pred EechhhccCC---------------------------------------------------------CCCchhhHHHHHH
Confidence 88864 2221 1134699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..+++++++|||.|+++.... . .. . ....+..+|+|+.++
T Consensus 149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~---------------------~--~~-~----~~~~~~~~~~a~~i~ 200 (240)
T PRK06101 149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK---------------------N--TF-A----MPMIITVEQASQEIR 200 (240)
T ss_pred HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC---------------------C--CC-C----CCcccCHHHHHHHHH
Confidence 9998754 468999999999998864311 0 00 0 011367899999999
Q ss_pred HHHHh
Q 015874 314 VAMVA 318 (399)
Q Consensus 314 ~~~~~ 318 (399)
..++.
T Consensus 201 ~~i~~ 205 (240)
T PRK06101 201 AQLAR 205 (240)
T ss_pred HHHhc
Confidence 99874
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=138.83 Aligned_cols=203 Identities=14% Similarity=0.120 Sum_probs=135.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||++++++|++.| .+|.+++|+.... .+..+++ .. ..++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~~---~~~~~~l---------~~----------~~~~~~ 58 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKEL---EEAAAEL---------NN----------KGNVLG 58 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHHH---HHHHHHH---------hc----------cCcEEE
Confidence 457899999999999999999999998 4578888875322 2222111 00 146888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
+++|+++++......+...+.+.++|+|||+|+.... .+.+...+++|+.+...+++++.+. ++..++|++
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (237)
T PRK07326 59 LAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI 138 (237)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence 9999996432111111111122479999999987532 2345677899999999998887653 245689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|+..+.
T Consensus 139 ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~~~ 162 (237)
T PRK07326 139 SSLAGTNFF--------------------------------------------------------AGGAAYNASKFGLVG 162 (237)
T ss_pred CChhhccCC--------------------------------------------------------CCCchHHHHHHHHHH
Confidence 987543311 113469999998888
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..+++++++||+.+.++.....+ .. .....+..+|+++.++.+
T Consensus 163 ~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-------------------------~~--~~~~~~~~~d~a~~~~~~ 215 (237)
T PRK07326 163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-------------------------SE--KDAWKIQPEDIAQLVLDL 215 (237)
T ss_pred HHHHHHHHhcccCcEEEEEeeccccCccccccc-------------------------ch--hhhccCCHHHHHHHHHHH
Confidence 87764 35899999999988664321000 00 001136789999999999
Q ss_pred HHhcc
Q 015874 316 MVAHA 320 (399)
Q Consensus 316 ~~~~~ 320 (399)
+..+.
T Consensus 216 l~~~~ 220 (237)
T PRK07326 216 LKMPP 220 (237)
T ss_pred HhCCc
Confidence 87543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-15 Score=142.41 Aligned_cols=203 Identities=14% Similarity=0.098 Sum_probs=131.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|+||||+|+||+++++.|+++| .+|.+..|+.++.+. .. ..+++.+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~~~~~---~~------------------------~~~~~~~~~ 52 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPDDVAR---MN------------------------SLGFTGILL 52 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHhHH---HH------------------------hCCCeEEEe
Confidence 589999999999999999999999 456788887543211 11 124678899
Q ss_pred cCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHH----HHhccCCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF----AKKCVKLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~----a~~~~~~~~~v~~ 160 (399)
|+++.+......+...... ..+|.+||+||.... .+.++..++.|+.++.++.+. +++. +.+++|++
T Consensus 53 D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ 131 (256)
T PRK08017 53 DLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT 131 (256)
T ss_pred ecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence 9996432111111111111 457999999986432 234667899999998887544 4443 56789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.+.+... .....|+.+|...|.
T Consensus 132 ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 132 SSVMGLIST--------------------------------------------------------PGRGAYAASKYALEA 155 (256)
T ss_pred cCcccccCC--------------------------------------------------------CCccHHHHHHHHHHH
Confidence 987433211 123579999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..+++++++|||.+.+..... +..... .. .+...+...+.+++.+|+|+++..+
T Consensus 156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--------------~~~~~~-~~-~~~~~~~~~~~~~~~~d~a~~~~~~ 219 (256)
T PRK08017 156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDN--------------VNQTQS-DK-PVENPGIAARFTLGPEAVVPKLRHA 219 (256)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCCcccchhhc--------------ccchhh-cc-chhhhHHHhhcCCCHHHHHHHHHHH
Confidence 87643 468999999998775532210 000000 00 1111222345689999999999999
Q ss_pred HHh
Q 015874 316 MVA 318 (399)
Q Consensus 316 ~~~ 318 (399)
+..
T Consensus 220 ~~~ 222 (256)
T PRK08017 220 LES 222 (256)
T ss_pred HhC
Confidence 974
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=138.51 Aligned_cols=224 Identities=13% Similarity=0.112 Sum_probs=143.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|+||||+|+||+++++.|+++| .+|.++.|+... ..++....+ . ....++.++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~~--~~~~~~~~~-------------~-----~~~~~~~~~~~ 59 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGND--CAKDWFEEY-------------G-----FTEDQVRLKEL 59 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcHH--HHHHHHHHh-------------h-----ccCCeEEEEEc
Confidence 589999999999999999999999 566888887531 111111100 0 01356889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
|+++++......+.....+.++|+|||+||.... .+.++..++.|+.+..++++.+.+. .+..+||++||
T Consensus 60 D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss 139 (245)
T PRK12824 60 DVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISS 139 (245)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECC
Confidence 9996432111111111223468999999997531 2456778899999999987665331 25679999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .....|+.+|.+.+.++
T Consensus 140 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 163 (245)
T PRK12824 140 VNGLKGQ--------------------------------------------------------FGQTNYSAAKAGMIGFT 163 (245)
T ss_pred hhhccCC--------------------------------------------------------CCChHHHHHHHHHHHHH
Confidence 8655421 11246999999998888
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..++++++++|+.+.++..... .. ........ . .....+...+|+++++..++.
T Consensus 164 ~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~------~~~~~~~~-~--------~~~~~~~~~~~va~~~~~l~~ 225 (245)
T PRK12824 164 KALASEGARYGITVNCIAPGYIATPMVEQM---GP------EVLQSIVN-Q--------IPMKRLGTPEEIAAAVAFLVS 225 (245)
T ss_pred HHHHHHHHHhCeEEEEEEEcccCCcchhhc---CH------HHHHHHHh-c--------CCCCCCCCHHHHHHHHHHHcC
Confidence 765 4579999999999987643211 00 11111111 1 112335577899999988775
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
.... .-.++.+++.++
T Consensus 226 ~~~~-~~~G~~~~~~~g 241 (245)
T PRK12824 226 EAAG-FITGETISINGG 241 (245)
T ss_pred cccc-CccCcEEEECCC
Confidence 3222 112678988887
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.2e-15 Score=137.67 Aligned_cols=197 Identities=16% Similarity=0.110 Sum_probs=134.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||.++++.|+++| ++|.++.|+.+... ...+++ .. ....++++++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~~~---~~~~~~---------~~--------~~~~~~~~~~ 57 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVERLE---RLADDL---------RA--------RGAVAVSTHE 57 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHHHH---HHHHHH---------HH--------hcCCeEEEEe
Confidence 4789999999999999999999999 55688888764321 111111 00 0135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+|+++++. ..+....+..++|+|||+||.... .+.+...+++|+.++.++++++.+. .+..+|+++|
T Consensus 58 ~Dl~~~~~---~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 58 LDILDTAS---HAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred cCCCChHH---HHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99996432 122222333467999999986532 1344567889999999999887653 2567899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....... .....|+.+|+..+.+
T Consensus 135 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 158 (243)
T PRK07102 135 SVAGDRGR--------------------------------------------------------ASNYVYGSAKAALTAF 158 (243)
T ss_pred cccccCCC--------------------------------------------------------CCCcccHHHHHHHHHH
Confidence 87422110 1124699999999988
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++.. ..+++++.++|+.|.++.... . ..+ ..-.+..+++|++++.++
T Consensus 159 ~~~l~~el~~~gi~v~~v~pg~v~t~~~~~---------------------~--~~~-----~~~~~~~~~~a~~i~~~~ 210 (243)
T PRK07102 159 LSGLRNRLFKSGVHVLTVKPGFVRTPMTAG---------------------L--KLP-----GPLTAQPEEVAKDIFRAI 210 (243)
T ss_pred HHHHHHHhhccCcEEEEEecCcccChhhhc---------------------c--CCC-----ccccCCHHHHHHHHHHHH
Confidence 8765 458999999999998753210 0 000 112456899999999988
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
.+
T Consensus 211 ~~ 212 (243)
T PRK07102 211 EK 212 (243)
T ss_pred hC
Confidence 73
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.2e-15 Score=141.81 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=143.5
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+++|+|+||||+|+||++++++|+++|++ |.+..|+... ..+...+++ ... .+.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~---------~~~--------~~~~ 60 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVN---IAFTYNSNVE--EANKIAEDL---------EQK--------YGIK 60 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHH---------HHh--------cCCc
Confidence 45678999999999999999999999999954 4655554321 122221111 000 1247
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC---------c----cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---------F----DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---------~----~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
+.++++|+++++......+...+.+.++|++||+||... + .+.+...+++|+.+...+.+.+.+.
T Consensus 61 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 140 (260)
T PRK08416 61 AKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRME 140 (260)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhh
Confidence 889999999765422222222223457999999997531 1 1345667888888888777766542
Q ss_pred -cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 152 -~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
.+..+||++||....... .....
T Consensus 141 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 164 (260)
T PRK08416 141 KVGGGSIISLSSTGNLVYI--------------------------------------------------------ENYAG 164 (260)
T ss_pred ccCCEEEEEEeccccccCC--------------------------------------------------------CCccc
Confidence 134689999987432211 11346
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.+|+..+.+++.. ..|+++..+.||.+-.+....++.. ......... . . ...-+...
T Consensus 165 Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-------~~~~~~~~~-~---~-----~~~r~~~p 228 (260)
T PRK08416 165 HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-------EEVKAKTEE-L---S-----PLNRMGQP 228 (260)
T ss_pred chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-------HHHHHHHHh-c---C-----CCCCCCCH
Confidence 999999999999876 3589999999998865432111100 011111111 0 0 01225678
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|.+++.++...... -.+..+.+.++
T Consensus 229 ~~va~~~~~l~~~~~~~-~~G~~i~vdgg 256 (260)
T PRK08416 229 EDLAGACLFLCSEKASW-LTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHHcChhhhc-ccCcEEEEcCC
Confidence 99999999988633221 12567777665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-15 Score=140.91 Aligned_cols=234 Identities=17% Similarity=0.114 Sum_probs=143.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||+++++.|+++| ++|.++.|+.......+.+.. ...++.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~~~~~~~~~~~----------------------~~~~~~~ 58 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHG---ANLILLDISPEIEKLADELCG----------------------RGHRCTA 58 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHHHH----------------------hCCceEE
Confidence 678999999999999999999999999 456788786532111111110 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.....+.++|+|||+||.... .+.++..++.|+.+...+++++.+. .+..++|+
T Consensus 59 ~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (263)
T PRK08226 59 VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM 138 (263)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999996432111111111223468999999997432 2345667899999999999987652 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... ......|+.+|...+
T Consensus 139 isS~~~~~~~-------------------------------------------------------~~~~~~Y~~sK~a~~ 163 (263)
T PRK08226 139 MSSVTGDMVA-------------------------------------------------------DPGETAYALTKAAIV 163 (263)
T ss_pred ECcHHhcccC-------------------------------------------------------CCCcchHHHHHHHHH
Confidence 9886431100 011346999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++.++||.+.++........... ......+.....+. ....+...+|+|+++..
T Consensus 164 ~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~ 233 (263)
T PRK08226 164 GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-EDPESVLTEMAKAI---------PLRRLADPLEVGELAAF 233 (263)
T ss_pred HHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-CCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHH
Confidence 888766 3489999999999988643111000000 00111122221110 11234678999999888
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+-+.++
T Consensus 234 l~~~~~~-~~~g~~i~~dgg 252 (263)
T PRK08226 234 LASDESS-YLTGTQNVIDGG 252 (263)
T ss_pred HcCchhc-CCcCceEeECCC
Confidence 7753221 111556666655
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-15 Score=138.93 Aligned_cols=233 Identities=12% Similarity=0.080 Sum_probs=147.1
Q ss_pred CCcccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 1 ~~~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
|.+.++ .++|++++||||+|+||++++++|++.|++ |....|... ....+.+.+
T Consensus 1 ~~~~~~--~l~~k~~lItG~~~gIG~a~a~~l~~~G~~---vv~~~~~~~-~~~~~~~~~-------------------- 54 (253)
T PRK08993 1 MILDAF--SLEGKVAVVTGCDTGLGQGMALGLAEAGCD---IVGINIVEP-TETIEQVTA-------------------- 54 (253)
T ss_pred Cccccc--CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEecCcch-HHHHHHHHh--------------------
Confidence 455544 478999999999999999999999999954 455544322 111111110
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
...++.++++|+++++......+.....+.++|++||+||.... .+.++..+++|+.++.++++++...
T Consensus 55 --~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 132 (253)
T PRK08993 55 --LGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFI 132 (253)
T ss_pred --cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 12467889999996543221122222223469999999997532 2567888999999999999987652
Q ss_pred -c-CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 015874 152 -V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (399)
Q Consensus 152 -~-~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
+ ...++|++||...+.... ...
T Consensus 133 ~~~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~ 156 (253)
T PRK08993 133 AQGNGGKIINIASMLSFQGGI--------------------------------------------------------RVP 156 (253)
T ss_pred hCCCCeEEEEECchhhccCCC--------------------------------------------------------CCc
Confidence 1 135799999986554221 124
Q ss_pred hhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeee
Q 015874 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (399)
Q Consensus 230 ~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 304 (399)
.|+.+|.+.+.+++.. ..|+++..++||.+-.+.... +... ......... .++. .-+..
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~---~~~~----~~~~~~~~~----~~p~-----~r~~~ 220 (253)
T PRK08993 157 SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ---LRAD----EQRSAEILD----RIPA-----GRWGL 220 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh---hccc----hHHHHHHHh----cCCC-----CCCcC
Confidence 6999999999888766 458999999999997754311 1000 000111111 1111 12556
Q ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 305 v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+|+|+.++.++..... .-.+..+.+.++
T Consensus 221 p~eva~~~~~l~s~~~~-~~~G~~~~~dgg 249 (253)
T PRK08993 221 PSDLMGPVVFLASSASD-YINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 79999999998863322 212566666554
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.4e-15 Score=136.51 Aligned_cols=221 Identities=18% Similarity=0.201 Sum_probs=140.6
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|||++|+||++++++|+++| ++|.++.|+... ..+.+.+.+ .. .+.++.++.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~~---------~~---------~~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEE--GAEEVVEEL---------KA---------YGVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchh--HHHHHHHHH---------Hh---------cCCceEEEEecC
Confidence 6899999999999999999999 456888886521 111111111 00 124678899999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEecce
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAY 164 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS~~ 164 (399)
++++...+..+........+|+|||+||.... .+.++..++.|+.++..+++.+.+. .+.++|+++||.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 58 SDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVV 137 (239)
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 96432111111111122458999999997532 2456777899999999999988753 2456899999964
Q ss_pred -eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 165 -VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 165 -v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+++.. ....|+.+|.+.+.+++
T Consensus 138 ~~~g~~---------------------------------------------------------~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 138 GLMGNA---------------------------------------------------------GQANYAASKAGVIGFTK 160 (239)
T ss_pred ccCCCC---------------------------------------------------------CCchhHHHHHHHHHHHH
Confidence 44421 13569999999988877
Q ss_pred Hh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 244 QS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 244 ~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
.. ..+++++++||+.+.++..... . ......... ..+ ..-+.+++|+|++++.++..
T Consensus 161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~----~-----~~~~~~~~~-~~~--------~~~~~~~~~~a~~~~~~~~~ 222 (239)
T TIGR01830 161 SLAKELASRNITVNAVAPGFIDTDMTDKL----S-----EKVKKKILS-QIP--------LGRFGTPEEVANAVAFLASD 222 (239)
T ss_pred HHHHHHhhcCeEEEEEEECCCCChhhhhc----C-----hHHHHHHHh-cCC--------cCCCcCHHHHHHHHHHHhCc
Confidence 65 3589999999998866432111 0 011111111 111 12356789999999988853
Q ss_pred ccCCCCCCcEEEecCC
Q 015874 319 HAKQPSDANIYHVGSS 334 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~ 334 (399)
. .....+++||++++
T Consensus 223 ~-~~~~~g~~~~~~~g 237 (239)
T TIGR01830 223 E-ASYITGQVIHVDGG 237 (239)
T ss_pred c-cCCcCCCEEEeCCC
Confidence 2 22223679999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=138.53 Aligned_cols=201 Identities=15% Similarity=0.117 Sum_probs=134.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++++||||+|+||.+++++|+++| .+|.+..|+.... +.+.+.+ ... ..+.+++++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~---------~~~-------~~~~~~~~~~ 59 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDRL---EELKAEL---------LAR-------YPGIKVAVAA 59 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHH---------Hhh-------CCCceEEEEE
Confidence 6789999999999999999999999 4567888875432 2222111 110 0134788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+|+++++......+.....+.++|+|||+||.... .+.+...+++|+.+..++++++... .+..+||++|
T Consensus 60 ~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (248)
T PRK08251 60 LDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLIS 139 (248)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99997543221112222234579999999997532 2345667899999999998877532 2567899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|........ .+...|+.+|...+.+
T Consensus 140 S~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~a~~~~ 164 (248)
T PRK08251 140 SVSAVRGLP-------------------------------------------------------GVKAAYAASKAGVASL 164 (248)
T ss_pred ccccccCCC-------------------------------------------------------CCcccHHHHHHHHHHH
Confidence 975432110 1125699999999888
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.. ..+++++.++||.+.++.... . .. ....+..+|+|++++.++
T Consensus 165 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---------------------~-----~~---~~~~~~~~~~a~~i~~~~ 215 (248)
T PRK08251 165 GEGLRAELAKTPIKVSTIEPGYIRSEMNAK---------------------A-----KS---TPFMVDTETGVKALVKAI 215 (248)
T ss_pred HHHHHHHhcccCcEEEEEecCcCcchhhhc---------------------c-----cc---CCccCCHHHHHHHHHHHH
Confidence 8765 347999999999987643210 0 00 123467899999999999
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
+.
T Consensus 216 ~~ 217 (248)
T PRK08251 216 EK 217 (248)
T ss_pred hc
Confidence 73
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=137.13 Aligned_cols=213 Identities=16% Similarity=0.159 Sum_probs=143.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+++||||+|+||+++++.|+++|+ +|.+..|+.... ...++.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------------~~~~~~~ 49 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDKPD------------------------------LSGNFHF 49 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCcccc------------------------------cCCcEEE
Confidence 6789999999999999999999999994 567777764321 0146788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|++++ .+...+...++|+|||+|+... . .+.++..+++|+.++.++++++... .+..+||
T Consensus 50 ~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 50 LQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred EECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999853 1222244567999999998532 1 2456778999999999999988652 2346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 124 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 147 (235)
T PRK06550 124 NMCSIASFVAG--------------------------------------------------------GGGAAYTASKHAL 147 (235)
T ss_pred EEcChhhccCC--------------------------------------------------------CCCcccHHHHHHH
Confidence 99987544321 1134699999998
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..++++++++||.|.++.... .+... ......... .....+...+|+|++++
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~a~~~~ 211 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEPG-----GLADWVARE---------TPIKRWAEPEEVAELTL 211 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCch-----HHHHHHhcc---------CCcCCCCCHHHHHHHHH
Confidence 8888765 358999999999998765311 11110 111111111 01233567799999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++....... .+.++.+.++
T Consensus 212 ~l~s~~~~~~-~g~~~~~~gg 231 (235)
T PRK06550 212 FLASGKADYM-QGTIVPIDGG 231 (235)
T ss_pred HHcChhhccC-CCcEEEECCc
Confidence 9885332211 2567777665
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=148.36 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=124.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+||||+|+||.+++++|+++| ++|++.+|+..+.. ...+++ .. ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~~---~~~~~l-------------~~-----~~~~~~~ 59 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLKKAE---AAAQEL-------------GI-----PPDSYTI 59 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHh-------------hc-----cCCceEE
Confidence 468899999999999999999999999 55688888654321 111111 00 1246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC--Cce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK--LKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~--~~~ 156 (399)
+.+|+++.+......+.......++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..+
T Consensus 60 ~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 60 IHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred EEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 9999996443111111111112359999999996421 2456778999999999999887653 11 258
Q ss_pred EEEEecceeecCc-CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 157 FVHVSTAYVAGER-TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 157 ~v~~SS~~v~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
||++||...+... .+... ..+ +.+.+... .+. ..+..++.+....+..+...|+.||
T Consensus 140 iV~vsS~~~~~~~~~~~~~---~~~--~~~~~~~~--------~~~---------~~~~~~~~~~~~~~~~~~~~Y~~SK 197 (322)
T PRK07453 140 LVILGTVTANPKELGGKIP---IPA--PADLGDLS--------GFE---------AGFKAPISMADGKKFKPGKAYKDSK 197 (322)
T ss_pred EEEEcccccCccccCCccC---CCC--ccchhhhh--------cch---------hcccccccccCccCCCccchhhHhH
Confidence 9999998765422 11100 000 00000000 000 0000000011112234557899999
Q ss_pred HHHHHHHHHh------hCCCcEEEEecCceecC
Q 015874 236 TMGEMLMQQS------KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 236 ~~~E~~l~~~------~~~~~~~i~Rp~~V~G~ 262 (399)
.+.+.+++.+ ..+++++.+|||.|++.
T Consensus 198 ~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 198 LCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred HHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 9988777655 14799999999999864
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-15 Score=136.61 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=140.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||+++++.|+++| .+|++++|+.... +.+.+.+ . ...++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~----------~~~~~~~ 57 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENKL---KRMKKTL---------S----------KYGNIHY 57 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------H----------hcCCeEE
Confidence 578999999999999999999999999 5568888875432 2221111 0 0136788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTA 163 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~ 163 (399)
+++|+++++......+.....+..+|.+||+++.... .+.++..++.|+.+...+++.+.++ .+..+||++||.
T Consensus 58 ~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 58 VVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999996543211111112223468999999985421 1345666888999998888887664 233578888887
Q ss_pred ee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 164 YV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 164 ~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.. ++.. .+...|+.+|++.+.++
T Consensus 138 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~~ 161 (238)
T PRK05786 138 SGIYKAS--------------------------------------------------------PDQLSYAVAKAGLAKAV 161 (238)
T ss_pred hhcccCC--------------------------------------------------------CCchHHHHHHHHHHHHH
Confidence 43 2110 12346999999998887
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..+++++++||+.++++.. +... ... ... .....+..+|++++++.++.
T Consensus 162 ~~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~-----------~~~--------~~~---~~~~~~~~~~va~~~~~~~~ 218 (238)
T PRK05786 162 EILASELLGRGIRVNGIAPTTISGDFE-PERN-----------WKK--------LRK---LGDDMAPPEDFAKVIIWLLT 218 (238)
T ss_pred HHHHHHHhhcCeEEEEEecCccCCCCC-chhh-----------hhh--------hcc---ccCCCCCHHHHHHHHHHHhc
Confidence 765 3589999999999998643 1000 000 000 01135677899999999886
Q ss_pred hccCCCCCCcEEEecC
Q 015874 318 AHAKQPSDANIYHVGS 333 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~ 333 (399)
.... .-.+..+.+.+
T Consensus 219 ~~~~-~~~g~~~~~~~ 233 (238)
T PRK05786 219 DEAD-WVDGVVIPVDG 233 (238)
T ss_pred cccc-CccCCEEEECC
Confidence 3222 11255666544
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=139.43 Aligned_cols=225 Identities=13% Similarity=0.095 Sum_probs=139.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.|++|+||||+|+||++++++|+++| ++|.++.|+.... +...+. .+..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~-----------------------~~~~ 54 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPEAG---KAAADE-----------------------VGGL 54 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHH-----------------------cCCc
Confidence 4788999999999999999999999999 5568888865322 111111 1125
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+.......++|+|||+||.... .+.++..+++|+.++..+++.+.+. .+..+
T Consensus 55 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~ 134 (255)
T PRK06057 55 FVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGS 134 (255)
T ss_pred EEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcE
Confidence 78899996432111111111112468999999986432 1346778899999998888876531 24567
Q ss_pred EEEEecc-eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 157 FVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 157 ~v~~SS~-~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+|++||. ++++.. .....|+.+|
T Consensus 135 iv~~sS~~~~~g~~--------------------------------------------------------~~~~~Y~~sK 158 (255)
T PRK06057 135 IINTASFVAVMGSA--------------------------------------------------------TSQISYTASK 158 (255)
T ss_pred EEEEcchhhccCCC--------------------------------------------------------CCCcchHHHH
Confidence 8888885 344421 1124699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
++.+.+.+.. ..++++++++||.+.++..... +... ... ..+... .++ ...+...+|+|+
T Consensus 159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~---~~~-~~~~~~----~~~-----~~~~~~~~~~a~ 223 (255)
T PRK06057 159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FAKD---PER-AARRLV----HVP-----MGRFAEPEEIAA 223 (255)
T ss_pred HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--ccCC---HHH-HHHHHh----cCC-----CCCCcCHHHHHH
Confidence 8777776643 4589999999999987654211 1000 000 111110 111 124688999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..... .-.+..+.+.++
T Consensus 224 ~~~~l~~~~~~-~~~g~~~~~~~g 246 (255)
T PRK06057 224 AVAFLASDDAS-FITASTFLVDGG 246 (255)
T ss_pred HHHHHhCcccc-CccCcEEEECCC
Confidence 98887763322 222556666654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.3e-15 Score=140.36 Aligned_cols=227 Identities=13% Similarity=0.107 Sum_probs=144.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+++||||+|+||++++++|+++|+ +|.+..|+.... ..+.+.+ .+.++.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~---~vv~~~~~~~~~-~~~~~~~----------------------~~~~~~ 58 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVAEAPE-TQAQVEA----------------------LGRKFH 58 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCchHHH-HHHHHHH----------------------cCCeEE
Confidence 36789999999999999999999999995 456666643211 1111110 135688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~ 157 (399)
++.+|+++++......+.....+.++|++||+||.... .+.++..+++|+.+...+.+++.+. ++ ..++
T Consensus 59 ~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~i 138 (251)
T PRK12481 59 FITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKI 138 (251)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEE
Confidence 89999997543222222222223568999999997532 2567888999999999998877652 12 3689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... ....|+.+|.+
T Consensus 139 i~isS~~~~~~~~--------------------------------------------------------~~~~Y~asK~a 162 (251)
T PRK12481 139 INIASMLSFQGGI--------------------------------------------------------RVPSYTASKSA 162 (251)
T ss_pred EEeCChhhcCCCC--------------------------------------------------------CCcchHHHHHH
Confidence 9999986554211 12469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..++||.|-.+..... ... ......... .++ ...+...+|+|+++
T Consensus 163 ~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~---~~~----~~~~~~~~~----~~p-----~~~~~~peeva~~~ 226 (251)
T PRK12481 163 VMGLTRALATELSQYNINVNAIAPGYMATDNTAAL---RAD----TARNEAILE----RIP-----ASRWGTPDDLAGPA 226 (251)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc---ccC----hHHHHHHHh----cCC-----CCCCcCHHHHHHHH
Confidence 99998765 4689999999999866432110 000 000111111 111 11246789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++..... .-.+..+.+.++
T Consensus 227 ~~L~s~~~~-~~~G~~i~vdgg 247 (251)
T PRK12481 227 IFLSSSASD-YVTGYTLAVDGG 247 (251)
T ss_pred HHHhCcccc-CcCCceEEECCC
Confidence 998863222 112556666554
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-15 Score=145.29 Aligned_cols=162 Identities=15% Similarity=0.168 Sum_probs=114.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+||||+|+||+++++.|+++| .+|.+.+|+.+.. +.+. ..+++++.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~~~---~~l~------------------------~~~~~~~~ 53 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEEDV---AALE------------------------AEGLEAFQ 53 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHH------------------------HCCceEEE
Confidence 5789999999999999999999999 5668888875432 1211 13577889
Q ss_pred ccCCCCCCCCCchhhHHHH---h-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHH----HHHhccCCce
Q 015874 92 GDISSEDLGLKDSNLKEEL---W-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVN----FAKKCVKLKV 156 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~---~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~----~a~~~~~~~~ 156 (399)
+|+++++.. .+....+ . .++|+|||+||.... .+.++..+++|+.|...+++ .+++. +..+
T Consensus 54 ~Dl~d~~~~---~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~ 129 (277)
T PRK05993 54 LDYAEPESI---AALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGR 129 (277)
T ss_pred ccCCCHHHH---HHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCE
Confidence 999964321 1122122 1 368999999987532 23466789999999655544 44443 5678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|+
T Consensus 130 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 153 (277)
T PRK05993 130 IVQCSSILGLVPM--------------------------------------------------------KYRGAYNASKF 153 (277)
T ss_pred EEEECChhhcCCC--------------------------------------------------------CccchHHHHHH
Confidence 9999997543211 22357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
..|.+++.. ..|+++++++||.|-.+.
T Consensus 154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 154 AIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 999998765 468999999999987653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-15 Score=138.22 Aligned_cols=227 Identities=10% Similarity=0.082 Sum_probs=140.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++|+++||||+|+||++++++|+++|+ +|.+..++... ...+..+++ .. .+.++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~---~vv~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 57 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGCGPNSP--RRVKWLEDQ---------KA---------LGFDFIA 57 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCChH--HHHHHHHHH---------Hh---------cCCcEEE
Confidence 4679999999999999999999999995 44554433211 111111111 00 1246778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++.+......+...+.+.++|+|||+||.... .+.++..+++|+.+...+++.+.+. .+..+||+
T Consensus 58 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 137 (246)
T PRK12938 58 SEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIIN 137 (246)
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 8999996432111111111223468999999997532 2457778999999988887766542 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|.+.+
T Consensus 138 isS~~~~~~~--------------------------------------------------------~~~~~y~~sK~a~~ 161 (246)
T PRK12938 138 ISSVNGQKGQ--------------------------------------------------------FGQTNYSTAKAGIH 161 (246)
T ss_pred EechhccCCC--------------------------------------------------------CCChhHHHHHHHHH
Confidence 9987432210 12357999999888
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..++++++++||.+.++..... . ...+..... . .....+...+|+++++..
T Consensus 162 ~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~------~~~~~~~~~-~--------~~~~~~~~~~~v~~~~~~ 223 (246)
T PRK12938 162 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---R------PDVLEKIVA-T--------IPVRRLGSPDEIGSIVAW 223 (246)
T ss_pred HHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---C------hHHHHHHHh-c--------CCccCCcCHHHHHHHHHH
Confidence 887665 3589999999999987643110 0 011111111 1 112335678999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+.+.++
T Consensus 224 l~~~~~~-~~~g~~~~~~~g 242 (246)
T PRK12938 224 LASEESG-FSTGADFSLNGG 242 (246)
T ss_pred HcCcccC-CccCcEEEECCc
Confidence 8753222 222667777654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-15 Score=140.27 Aligned_cols=230 Identities=13% Similarity=0.073 Sum_probs=143.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++|+||||+|+||+++++.|+++| ++|.++.|+.+... +..+.+ .. ...++.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~---------~~~~~~ 61 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEKVD---AAVAQL---------QQ---------AGPEGL 61 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------HH---------hCCceE
Confidence 4788999999999999999999999999 55688888754321 111111 00 124567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
++.+|+++++......+.......++|+|||+|+.... .+.++..+++|+.++.++++++.+. +...+|++
T Consensus 62 ~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~ 141 (264)
T PRK07576 62 GVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQ 141 (264)
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 88999996432111111111123468999999975321 2456777889999999999987653 12358999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 142 iss~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~ 165 (264)
T PRK07576 142 ISAPQAFVPM--------------------------------------------------------PMQAHVCAAKAGVD 165 (264)
T ss_pred ECChhhccCC--------------------------------------------------------CCccHHHHHHHHHH
Confidence 9997543211 11356999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..+++++.++|+.+.+.... ..+... .......... . ....+...+|+|++++.
T Consensus 166 ~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~-----~~~~~~~~~~---~-----~~~~~~~~~dva~~~~~ 230 (264)
T PRK07576 166 MLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPS-----PELQAAVAQS---V-----PLKRNGTKQDIANAALF 230 (264)
T ss_pred HHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccC-----HHHHHHHHhc---C-----CCCCCCCHHHHHHHHHH
Confidence 999866 35799999999988753210 001110 0011111100 1 12235678999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++... ...-.+..+.+.++
T Consensus 231 l~~~~-~~~~~G~~~~~~gg 249 (264)
T PRK07576 231 LASDM-ASYITGVVLPVDGG 249 (264)
T ss_pred HcChh-hcCccCCEEEECCC
Confidence 98632 21111456666654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-15 Score=139.25 Aligned_cols=227 Identities=14% Similarity=0.134 Sum_probs=143.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| .+|+++.|+.+.. +.+.+++ .. ...++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 61 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVERL---KELRAEI---------EA---------EGGAAH 61 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4778999999999999999999999999 5678888875432 1111111 00 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-----
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK----- 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~----- 153 (399)
++.+|+++++......+...+...++|++||+|+.... .+.++..+++|+.+...+++++... ..
T Consensus 62 ~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T PRK06949 62 VVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGN 141 (258)
T ss_pred EEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCC
Confidence 89999996432111111111223468999999996432 2456778899999999998877532 11
Q ss_pred ---CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 154 ---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 154 ---~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
..++|++||...+... .....
T Consensus 142 ~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 165 (258)
T PRK06949 142 TKPGGRIINIASVAGLRVL--------------------------------------------------------PQIGL 165 (258)
T ss_pred CCCCeEEEEECcccccCCC--------------------------------------------------------CCccH
Confidence 2589999988654321 12357
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.+|.+.+.+++.+ ..++++++++||.|+++..... |.. ..... ... .++ ...+..-
T Consensus 166 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~--~~~------~~~~~-~~~---~~~-----~~~~~~p 228 (258)
T PRK06949 166 YCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH--WET------EQGQK-LVS---MLP-----RKRVGKP 228 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc--cCh------HHHHH-HHh---cCC-----CCCCcCH
Confidence 999999999998876 3589999999999998654211 111 00001 111 111 1234556
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
+|+++++..++..... .-.+....+.+
T Consensus 229 ~~~~~~~~~l~~~~~~-~~~G~~i~~dg 255 (258)
T PRK06949 229 EDLDGLLLLLAADESQ-FINGAIISADD 255 (258)
T ss_pred HHHHHHHHHHhChhhc-CCCCcEEEeCC
Confidence 8999999998863221 11144555544
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.1e-15 Score=138.21 Aligned_cols=205 Identities=17% Similarity=0.178 Sum_probs=144.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+++++|||||+.||..++++|.++| +.|..+.|++++...+ .+++. . ..+-++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~~kL~~l---a~~l~---------~--------~~~v~v~ 59 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRG---YNLILVARREDKLEAL---AKELE---------D--------KTGVEVE 59 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHH---HHHHH---------H--------hhCceEE
Confidence 4678899999999999999999999999 5569999998765333 22221 1 1135678
Q ss_pred EEeccCCCCCCCCCchhhHH-HHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 89 FVPGDISSEDLGLKDSNLKE-ELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~-~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
++.+|+++++. .+.+. ++.. .+|++|||||...+ .+...++++.|+.+...|.++..+. ++.
T Consensus 60 vi~~DLs~~~~----~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~ 135 (265)
T COG0300 60 VIPADLSDPEA----LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA 135 (265)
T ss_pred EEECcCCChhH----HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999997642 22221 1222 59999999998743 2456677999999999998887663 356
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|.++|.+.+-.. +..+.|+.|
T Consensus 136 G~IiNI~S~ag~~p~--------------------------------------------------------p~~avY~AT 159 (265)
T COG0300 136 GHIINIGSAAGLIPT--------------------------------------------------------PYMAVYSAT 159 (265)
T ss_pred ceEEEEechhhcCCC--------------------------------------------------------cchHHHHHH
Confidence 789999998765532 224679999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|+..-.+.+.. ..|+.++.+-||.+....... .. . .. .......-++..+|+|
T Consensus 160 Ka~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~--------------~--~~-~~~~~~~~~~~~~~va 217 (265)
T COG0300 160 KAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KG--------------S--DV-YLLSPGELVLSPEDVA 217 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----cc--------------c--cc-ccccchhhccCHHHHH
Confidence 99876665544 568999999999987754310 00 0 00 0011245678889999
Q ss_pred HHHHHHHHh
Q 015874 310 NAMIVAMVA 318 (399)
Q Consensus 310 ~~i~~~~~~ 318 (399)
+..+.++..
T Consensus 218 ~~~~~~l~~ 226 (265)
T COG0300 218 EAALKALEK 226 (265)
T ss_pred HHHHHHHhc
Confidence 999999974
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.1e-15 Score=139.32 Aligned_cols=233 Identities=13% Similarity=0.072 Sum_probs=145.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++++||||+|+||++++++|+++|+ +|.++.|+.+.. ++..+.+ .. .+.++.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~~~~---~~~~~~~---------~~---------~~~~~~~ 63 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQELV---DKGLAAY---------RE---------LGIEAHG 63 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEE
Confidence 4779999999999999999999999994 557777765432 1111111 00 1246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+++|+++++......+.....+..+|+|||+||.... .+.+...+++|+.+...+++.+... .+..+||+
T Consensus 64 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07097 64 YVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIIN 143 (265)
T ss_pred EEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999996543221111111223458999999997542 2457777899999999888877652 24578999
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||.. .++. .....|+.+|...
T Consensus 144 isS~~~~~~~---------------------------------------------------------~~~~~Y~~sKaal 166 (265)
T PRK07097 144 ICSMMSELGR---------------------------------------------------------ETVSAYAAAKGGL 166 (265)
T ss_pred EcCccccCCC---------------------------------------------------------CCCccHHHHHHHH
Confidence 99863 2221 1135699999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++.++||.|.++...+....... .....+...... . . ....+...+|+|..++
T Consensus 167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~-~---~-----~~~~~~~~~dva~~~~ 236 (265)
T PRK07097 167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIA-K---T-----PAARWGDPEDLAGPAV 236 (265)
T ss_pred HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHHHHHHh-c---C-----CccCCcCHHHHHHHHH
Confidence 9999876 3589999999999988754221100000 000001000000 0 0 1123556789999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++......- .+..+.+.++
T Consensus 237 ~l~~~~~~~~-~g~~~~~~gg 256 (265)
T PRK07097 237 FLASDASNFV-NGHILYVDGG 256 (265)
T ss_pred HHhCcccCCC-CCCEEEECCC
Confidence 9887422211 1566666664
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=136.61 Aligned_cols=227 Identities=11% Similarity=0.075 Sum_probs=142.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
||+++||||+|+||+++++.|+++| .+|.++.|+.... ++..+.+ .+ .+.++.+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~~~ 56 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEKL---EEAKLEI---------EQ---------FPGQVLTVQ 56 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEEEE
Confidence 5899999999999999999999999 5668888875432 2221111 00 124688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c-CCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V-KLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~-~~~~~v~~ 160 (399)
+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++++.+. . ...+++++
T Consensus 57 ~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 57 MDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 99996543221122222233578999999985321 2456778999999999999988542 1 23578999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 137 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 137 VATYAWDAG--------------------------------------------------------PGVIHSAAAKAGVLA 160 (252)
T ss_pred cChhhccCC--------------------------------------------------------CCCcchHHHHHHHHH
Confidence 887532211 112469999999998
Q ss_pred HHHHh------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 241 LMQQS------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+.+.. ..|+++..++||.+.+..... ..+.. .......... . ...-+...+|+|+++..
T Consensus 161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~-~~~~~-----~~~~~~~~~~----~-----~~~~~~~~~~va~~~~~ 225 (252)
T PRK07677 161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD-KLWES-----EEAAKRTIQS----V-----PLGRLGTPEEIAGLAYF 225 (252)
T ss_pred HHHHHHHHhCcccCeEEEEEeecccccccccc-cccCC-----HHHHHHHhcc----C-----CCCCCCCHHHHHHHHHH
Confidence 88864 248999999999998532100 00101 1112222111 0 01235677899999888
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+.+.++
T Consensus 226 l~~~~~~-~~~g~~~~~~gg 244 (252)
T PRK07677 226 LLSDEAA-YINGTCITMDGG 244 (252)
T ss_pred HcCcccc-ccCCCEEEECCC
Confidence 7753221 112566766654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=138.55 Aligned_cols=235 Identities=9% Similarity=0.032 Sum_probs=145.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+++||||+|.||.+++++|+++|+ +|.+..|+.+.. +...+++ .. ..+.++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~~~---------~~--------~~~~~~~~ 62 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNEENL---KKAREKI---------KS--------ESNVDVSY 62 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hh--------hcCCceEE
Confidence 6789999999999999999999999994 567778865432 2222111 00 01246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+... .+.++|++||+||.... .+.++..+++|+.+...+++.+.+. ++..++|+
T Consensus 63 ~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~ 141 (263)
T PRK08339 63 IVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIY 141 (263)
T ss_pred EEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999997543211111111 12468999999996432 2567888999999888887766542 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 142 isS~~~~~~~--------------------------------------------------------~~~~~y~asKaal~ 165 (263)
T PRK08339 142 STSVAIKEPI--------------------------------------------------------PNIALSNVVRISMA 165 (263)
T ss_pred EcCccccCCC--------------------------------------------------------CcchhhHHHHHHHH
Confidence 9998654321 11246999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCC-Cccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.. ..|+++..+.||.|-.+...... .... .............. . . ...-+...+|+|+++
T Consensus 166 ~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-----p~~r~~~p~dva~~v 236 (263)
T PRK08339 166 GLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK-P---I-----PLGRLGEPEEIGYLV 236 (263)
T ss_pred HHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc-c---C-----CcccCcCHHHHHHHH
Confidence 888765 46899999999998664310000 0000 00000011111111 0 1 112356689999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++..... --.+..+.+.++
T Consensus 237 ~fL~s~~~~-~itG~~~~vdgG 257 (263)
T PRK08339 237 AFLASDLGS-YINGAMIPVDGG 257 (263)
T ss_pred HHHhcchhc-CccCceEEECCC
Confidence 988863222 112667777766
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.3e-15 Score=141.86 Aligned_cols=139 Identities=20% Similarity=0.182 Sum_probs=104.6
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
..+.+.||.|+|||||..||.+++..|.++| .++..++|+....+.. ++.++.+ ..
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl~~v~~~l~~~~--------------------~~ 62 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRLERVAEELRKLG--------------------SL 62 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhHHHHHHHHHHhC--------------------Cc
Confidence 3577889999999999999999999999999 5567777777654333 3333211 11
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
.+++.+++|+++.+......++....+.++|++|||||.... .+.....+++|+.|+..+.+++..+ .+.
T Consensus 63 ~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~ 142 (282)
T KOG1205|consen 63 EKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRND 142 (282)
T ss_pred CccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCC
Confidence 269999999998776555555555667899999999998642 2456678999999999999988764 234
Q ss_pred ceEEEEecceeec
Q 015874 155 KVFVHVSTAYVAG 167 (399)
Q Consensus 155 ~~~v~~SS~~v~~ 167 (399)
.+||.+||++-+-
T Consensus 143 GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 143 GHIVVISSIAGKM 155 (282)
T ss_pred CeEEEEecccccc
Confidence 7899999986433
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=133.23 Aligned_cols=219 Identities=14% Similarity=0.101 Sum_probs=138.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++|+ +|.+..|+... ..+.+.++ .++.
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~l~~~-----------------------~~~~ 54 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGA---NVRFTYAGSKD--AAERLAQE-----------------------TGAT 54 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCCHH--HHHHHHHH-----------------------hCCe
Confidence 36789999999999999999999999995 45665554321 11221111 1356
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-ccCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CVKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~~~~~~~v~~ 160 (399)
++.+|+++++. ..+.. ....++|++||+||.... .+.++..+++|+.++..+++.+.+ +....++|++
T Consensus 55 ~~~~D~~~~~~---~~~~~-~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 130 (237)
T PRK12742 55 AVQTDSADRDA---VIDVV-RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIII 130 (237)
T ss_pred EEecCCCCHHH---HHHHH-HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 77899985321 11111 123458999999987532 245788899999999999776655 3345689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...... +......|+.+|+..|.
T Consensus 131 sS~~~~~~-------------------------------------------------------~~~~~~~Y~~sKaa~~~ 155 (237)
T PRK12742 131 GSVNGDRM-------------------------------------------------------PVAGMAAYAASKSALQG 155 (237)
T ss_pred eccccccC-------------------------------------------------------CCCCCcchHHhHHHHHH
Confidence 98753110 01223579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.+ ..++++++++||.+..+.... . . .... ..... .+ ...+...+|+++++..+
T Consensus 156 ~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~---~----~---~~~~-~~~~~---~~-----~~~~~~p~~~a~~~~~l 216 (237)
T PRK12742 156 MARGLARDFGPRGITINVVQPGPIDTDANPA---N----G---PMKD-MMHSF---MA-----IKRHGRPEEVAGMVAWL 216 (237)
T ss_pred HHHHHHHHHhhhCeEEEEEecCcccCCcccc---c----c---HHHH-HHHhc---CC-----CCCCCCHHHHHHHHHHH
Confidence 98765 457999999999997654310 0 0 0011 11111 00 11245789999999888
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+..... .-.+..+.+.++
T Consensus 217 ~s~~~~-~~~G~~~~~dgg 234 (237)
T PRK12742 217 AGPEAS-FVTGAMHTIDGA 234 (237)
T ss_pred cCcccC-cccCCEEEeCCC
Confidence 863222 112566666554
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=138.18 Aligned_cols=209 Identities=13% Similarity=0.162 Sum_probs=135.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+++++++||||+|+||+++++.|+++| .+|+++.|+.+.... .+...+++ . ..+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~---------~---------~~~~ 62 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIHTAAEEI---------E---------AAGG 62 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHHHHHHHH---------H---------hcCC
Confidence 578999999999999999999999999 566888887643211 11111111 0 0134
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++.+|+++++...+..+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++... ++..
T Consensus 63 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g 142 (273)
T PRK08278 63 QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP 142 (273)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC
Confidence 68889999997543221122222223479999999997532 1456778899999999999998753 2345
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+++++||....... .......|+.+|
T Consensus 143 ~iv~iss~~~~~~~------------------------------------------------------~~~~~~~Y~~sK 168 (273)
T PRK08278 143 HILTLSPPLNLDPK------------------------------------------------------WFAPHTAYTMAK 168 (273)
T ss_pred EEEEECCchhcccc------------------------------------------------------ccCCcchhHHHH
Confidence 78888875311100 002235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCc-eecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTV-VSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~-V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
++.|.+++.+ ..+++++.+.|+. +-.+.. .....+. .....+...+|+|
T Consensus 169 ~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~-----------------~~~~~~~--------~~~~~~~~p~~va 223 (273)
T PRK08278 169 YGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV-----------------RNLLGGD--------EAMRRSRTPEIMA 223 (273)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH-----------------Hhccccc--------ccccccCCHHHHH
Confidence 9999999876 3589999999984 322111 0000000 0112356789999
Q ss_pred HHHHHHHHh
Q 015874 310 NAMIVAMVA 318 (399)
Q Consensus 310 ~~i~~~~~~ 318 (399)
++++.++..
T Consensus 224 ~~~~~l~~~ 232 (273)
T PRK08278 224 DAAYEILSR 232 (273)
T ss_pred HHHHHHhcC
Confidence 999998864
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.2e-15 Score=135.63 Aligned_cols=266 Identities=15% Similarity=0.176 Sum_probs=182.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+-..|..||||-||.=|++|++.|+..|+ +|+.+.|+...- ...+++-.+. ..-.+..
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFNT~RIeHlY~nP-----------------~~h~~~~ 84 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFNTARIEHLYSNP-----------------HTHNGAS 84 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccchhhhhhhhcCc-----------------hhcccce
Confidence 34446899999999999999999999994 558887776432 2333322110 0112366
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhcc--CCceEEE
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVH 159 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~--~~~~~v~ 159 (399)
...+.||++ |...+.+++. +++-|+|+|++.+.. +-++...++...|+..|+++++.+. ..-+|..
T Consensus 85 mkLHYgDmT-------Dss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQ 157 (376)
T KOG1372|consen 85 MKLHYGDMT-------DSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQ 157 (376)
T ss_pred eEEeecccc-------chHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEe
Confidence 788999999 5555556665 689999999987532 2344556778899999999999872 2347888
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
.||...||.. .|.+.+|.. |.-|.++|+.+|..+-
T Consensus 158 AstSElyGkv----~e~PQsE~T-----------------------------------------PFyPRSPYa~aKmy~~ 192 (376)
T KOG1372|consen 158 ASTSELYGKV----QEIPQSETT-----------------------------------------PFYPRSPYAAAKMYGY 192 (376)
T ss_pred cccHhhcccc----cCCCcccCC-----------------------------------------CCCCCChhHHhhhhhe
Confidence 9999999953 344444433 3456788999999888
Q ss_pred HHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc-cCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 240 MLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 240 ~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
.++-++.....+. .--|++|.... |-.|-..-.+.+.+.+.++..|.+..+ .|+.++.+||-|..|-+++++.+++.
T Consensus 193 WivvNyREAYnmf-AcNGILFNHES-PRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~ 270 (376)
T KOG1372|consen 193 WIVVNYREAYNMF-ACNGILFNHES-PRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ 270 (376)
T ss_pred EEEEEhHHhhcce-eeccEeecCCC-CccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc
Confidence 7776662111111 12255555443 332222222445555666655555444 48889999999999999999999985
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
..+. .|-+.++ +..|++|+.+..+...|..
T Consensus 271 d~Pd-----DfViATg--e~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 271 DSPD-----DFVIATG--EQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred CCCC-----ceEEecC--CcccHHHHHHHHHHhhCcE
Confidence 4443 4888888 5699999999999999854
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.5e-15 Score=138.19 Aligned_cols=226 Identities=16% Similarity=0.149 Sum_probs=135.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|+|+||||+|+||+++++.|+++|++ |.+..++... ..+...+++ .. .+.++.++.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~~~ 58 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWS---VGINYARDAA--AAEETADAV---------RA---------AGGRACVVA 58 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHH---------Hh---------cCCcEEEEE
Confidence 368999999999999999999999954 4554433211 111111111 00 124688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHh-cc--C---CceE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK-CV--K---LKVF 157 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~-~~--~---~~~~ 157 (399)
+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++..+++.+.+ +. + ..+|
T Consensus 59 ~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~i 138 (248)
T PRK06947 59 GDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAI 138 (248)
T ss_pred eccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 99997543111111111223479999999996421 134566789999999998765443 21 1 2359
Q ss_pred EEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 158 VHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 158 v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
|++||.+. ++.. .....|+.+|.
T Consensus 139 i~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 162 (248)
T PRK06947 139 VNVSSIASRLGSP--------------------------------------------------------NEYVDYAGSKG 162 (248)
T ss_pred EEECchhhcCCCC--------------------------------------------------------CCCcccHhhHH
Confidence 99988643 3311 11236999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+++.+ ..+++++++|||.+.++.... .+ . . ...... ... .+ ..-....+|+|++
T Consensus 163 ~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~-~~---~-~---~~~~~~-~~~---~~-----~~~~~~~e~va~~ 225 (248)
T PRK06947 163 AVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS-GG---Q-P---GRAARL-GAQ---TP-----LGRAGEADEVAET 225 (248)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc-cC---C-H---HHHHHH-hhc---CC-----CCCCcCHHHHHHH
Confidence 999888766 347999999999998764311 00 0 0 001111 000 00 1113577999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.+.++.+.++
T Consensus 226 ~~~l~~~~~~-~~~G~~~~~~gg 247 (248)
T PRK06947 226 IVWLLSDAAS-YVTGALLDVGGG 247 (248)
T ss_pred HHHHcCcccc-CcCCceEeeCCC
Confidence 9998864321 112566666543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.5e-15 Score=137.68 Aligned_cols=163 Identities=15% Similarity=0.117 Sum_probs=114.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++||||||||+||+++++.|+++| .+|.+++|+.... +.+.+.. . ..+.++.++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~~---~~~~~~~----------~--------~~~~~~~~~~ 57 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQV---TALRAEA----------A--------RRGLALRVEK 57 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH----------H--------hcCCcceEEE
Confidence 4689999999999999999999999 5568888875332 1111110 0 0124588899
Q ss_pred ccCCCCCCCCCchhhHHHHhc-CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~-~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
+|+++ .+....... ++|+|||+|+.... .+.++..+++|+.+..++.+.+.+. .+.++||++
T Consensus 58 ~D~~~-------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 130 (257)
T PRK09291 58 LDLTD-------AIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFT 130 (257)
T ss_pred eeCCC-------HHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 99995 333434444 89999999996532 2446677889999888777654431 245799999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...|.
T Consensus 131 SS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 131 SSMAGLITG--------------------------------------------------------PFTGAYCASKHALEA 154 (257)
T ss_pred cChhhccCC--------------------------------------------------------CCcchhHHHHHHHHH
Confidence 987533211 113569999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceec
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSG 261 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G 261 (399)
+.+.. ..+++++++|||.+..
T Consensus 155 ~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 155 IAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccc
Confidence 88755 3589999999998744
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-15 Score=144.53 Aligned_cols=192 Identities=14% Similarity=0.115 Sum_probs=119.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||++++++|+++| ++|.+.+|+.+.... ..+++ .+.. ...++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~~~~---~~~~l---------~~~~-------~~~~~ 69 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDKGKA---AAARI---------TAAT-------PGADV 69 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHH---HHHHH---------HHhC-------CCCce
Confidence 45688999999999999999999999999 556888887543211 11111 1000 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
.++.+|+++.+......+.....+.++|+|||+||.... .+.++..+++|+.+...+++.+.+. .+..+||+
T Consensus 70 ~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~ 149 (306)
T PRK06197 70 TLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVT 149 (306)
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 889999996543211111111123468999999997532 2456777899999966655554432 24579999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+.+........+... . .+..+...|+.||.+.+
T Consensus 150 vSS~~~~~~~~~~~~~~~~--~-----------------------------------------~~~~~~~~Y~~SK~a~~ 186 (306)
T PRK06197 150 VSSGGHRIRAAIHFDDLQW--E-----------------------------------------RRYNRVAAYGQSKLANL 186 (306)
T ss_pred ECCHHHhccCCCCccccCc--c-----------------------------------------cCCCcHHHHHHHHHHHH
Confidence 9998644311100000000 0 01123357999999999
Q ss_pred HHHHHh-----hCCCcEEE--EecCceecCCC
Q 015874 240 MLMQQS-----KENLSLVI--IRPTVVSGTYK 264 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i--~Rp~~V~G~~~ 264 (399)
.+.+.+ ..++++.+ +.||.|..+..
T Consensus 187 ~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 187 LFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred HHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 998865 24555544 47998876543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=141.35 Aligned_cols=215 Identities=15% Similarity=0.144 Sum_probs=140.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++|++|+||||+|+||.++++.|+++| .+|.++.|+.+.. +.+.+ +.+. ...+.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~l---~~~~~-------------~l~~------~~~~~ 60 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEAEL---AALAA-------------ELGG------DDRVL 60 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------HhcC------CCcEE
Confidence 3678999999999999999999999999 5568888865422 22211 1110 23566
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
.+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++.+... +...+||+
T Consensus 61 ~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~ 140 (296)
T PRK05872 61 TVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQ 140 (296)
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 77899996543211111121223578999999997532 2456778999999999999988653 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 141 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 164 (296)
T PRK05872 141 VSSLAAFAAA--------------------------------------------------------PGMAAYCASKAGVE 164 (296)
T ss_pred EeCHhhcCCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 9998655421 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..++.++++.||.+.++...... ... ........ ..+. ....++..+|+|++++.
T Consensus 165 ~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~---~~~----~~~~~~~~-~~~~------p~~~~~~~~~va~~i~~ 230 (296)
T PRK05872 165 AFANALRLEVAHHGVTVGSAYLSWIDTDLVRDAD---ADL----PAFRELRA-RLPW------PLRRTTSVEKCAAAFVD 230 (296)
T ss_pred HHHHHHHHHHHHHCcEEEEEecCcccchhhhhcc---ccc----hhHHHHHh-hCCC------cccCCCCHHHHHHHHHH
Confidence 998765 46899999999998765431110 000 01111111 1100 12245789999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
++..
T Consensus 231 ~~~~ 234 (296)
T PRK05872 231 GIER 234 (296)
T ss_pred HHhc
Confidence 9874
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=137.80 Aligned_cols=204 Identities=15% Similarity=0.177 Sum_probs=134.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||.+++++|+++| ++|.+++|+.... +.+.+++ . .+.++.+
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~-------------~------~~~~~~~ 57 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAEKL---EALAARL-------------P------YPGRHRW 57 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH-------------h------cCCceEE
Confidence 468899999999999999999999999 5568888874322 1111111 0 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+.... ...+|+|||+||.... .+.+...+++|+.++.++++.+.+. .+..++++
T Consensus 58 ~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~ 136 (263)
T PRK09072 58 VVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVN 136 (263)
T ss_pred EEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999965431111111211 3568999999997542 2456777899999999999988653 23467888
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 137 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 160 (263)
T PRK09072 137 VGSTFGSIGY--------------------------------------------------------PGYASYCASKFALR 160 (263)
T ss_pred ecChhhCcCC--------------------------------------------------------CCccHHHHHHHHHH
Confidence 8876432211 11356999999988
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..+++++.+.||.+.++..... .. .... .........+|+|++++.
T Consensus 161 ~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~--------------~~-------~~~~--~~~~~~~~~~~va~~i~~ 217 (263)
T PRK09072 161 GFSEALRRELADTGVRVLYLAPRATRTAMNSEA--------------VQ-------ALNR--ALGNAMDDPEDVAAAVLQ 217 (263)
T ss_pred HHHHHHHHHhcccCcEEEEEecCcccccchhhh--------------cc-------cccc--cccCCCCCHHHHHHHHHH
Confidence 877655 4579999999998865432100 00 0000 001135678999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
+++.
T Consensus 218 ~~~~ 221 (263)
T PRK09072 218 AIEK 221 (263)
T ss_pred HHhC
Confidence 9974
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=136.93 Aligned_cols=228 Identities=16% Similarity=0.101 Sum_probs=145.1
Q ss_pred HhhcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 7 VEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 7 ~~~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+..++||+++||||+ +.||.+++++|+++| .+|.+..|+.. ..+... ++ ..
T Consensus 2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~~---~~~~~~-~~--------------------~~ 54 (252)
T PRK06079 2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQNDR---MKKSLQ-KL--------------------VD 54 (252)
T ss_pred ccccCCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCchH---HHHHHH-hh--------------------cc
Confidence 345789999999999 799999999999999 45577777521 111111 11 02
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-c
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-V 152 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~ 152 (399)
.++.++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+++++.+. .
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 357789999997654222222222334579999999996421 2457778899999999999887763 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..++|++||.+..... .....|+
T Consensus 135 ~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (252)
T PRK06079 135 PGASIVTLTYFGSERAI--------------------------------------------------------PNYNVMG 158 (252)
T ss_pred cCceEEEEeccCccccC--------------------------------------------------------CcchhhH
Confidence 34678999886432110 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|+..+.+.+.. ..|+++..+.||.|-.+.... +... ......... . .+ ...+...+|
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~---~~~~----~~~~~~~~~-~---~p-----~~r~~~ped 222 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG---IKGH----KDLLKESDS-R---TV-----DGVGVTIEE 222 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc---CCCh----HHHHHHHHh-c---Cc-----ccCCCCHHH
Confidence 9999999998766 468999999999997653211 1000 011111111 1 01 123566799
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+++..++...... -.+.+..+.++
T Consensus 223 va~~~~~l~s~~~~~-itG~~i~vdgg 248 (252)
T PRK06079 223 VGNTAAFLLSDLSTG-VTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHHhCccccc-ccccEEEeCCc
Confidence 999999988632221 12556666554
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=136.09 Aligned_cols=206 Identities=17% Similarity=0.136 Sum_probs=135.6
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+++++|+||||+|+||.++++.|++.|+ +|.++.|+.... +++.+++.+ ....+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~~~---~~~~~~l~~-----------------~~~~~ 63 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEKL---EAVYDEIEA-----------------AGGPQ 63 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHHHH---HHHHHHHHh-----------------cCCCC
Confidence 4577899999999999999999999999994 568888875432 222222100 01245
Q ss_pred eEEEeccCCCC--CCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 87 ITFVPGDISSE--DLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 87 i~~~~gDl~~~--~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
+.++.+|++.. +......+.+.+.+.++|+|||+|+.... .+.+...+++|+.++.++++++.+. .+
T Consensus 64 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~ 143 (247)
T PRK08945 64 PAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP 143 (247)
T ss_pred ceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC
Confidence 67788888632 11010112222334578999999987422 2456778999999999999887542 35
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||....... .....|+.
T Consensus 144 ~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~ 167 (247)
T PRK08945 144 AASLVFTSSSVGRQGR--------------------------------------------------------ANWGAYAV 167 (247)
T ss_pred CCEEEEEccHhhcCCC--------------------------------------------------------CCCcccHH
Confidence 7789999987533211 11246999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|.+.+.+++.+ ..++++++++|+.+-++.... . ++.. ....+...+|+
T Consensus 168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---~---------------------~~~~--~~~~~~~~~~~ 221 (247)
T PRK08945 168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---A---------------------FPGE--DPQKLKTPEDI 221 (247)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---h---------------------cCcc--cccCCCCHHHH
Confidence 999999998866 347889999999886642200 0 0000 01135677899
Q ss_pred HHHHHHHHH
Q 015874 309 VNAMIVAMV 317 (399)
Q Consensus 309 a~~i~~~~~ 317 (399)
++++..++.
T Consensus 222 ~~~~~~~~~ 230 (247)
T PRK08945 222 MPLYLYLMG 230 (247)
T ss_pred HHHHHHHhC
Confidence 999999875
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=141.29 Aligned_cols=245 Identities=18% Similarity=0.125 Sum_probs=151.1
Q ss_pred ccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 4 GSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 4 ~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
.++...++||+++||||+|+||.++++.|+++|. +|.+..|.... ..+...+++ .. .
T Consensus 4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~--~~~~~~~~i---------~~---------~ 60 (306)
T PRK07792 4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASAL--DASDVLDEI---------RA---------A 60 (306)
T ss_pred ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchh--HHHHHHHHH---------Hh---------c
Confidence 4555668899999999999999999999999994 45666654321 112222111 00 1
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c---
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--- 152 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~--- 152 (399)
+.++.++.+|+++++......+...+ +.++|+|||+||.... .+.++..+++|+.++.++++++... .
T Consensus 61 g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~ 139 (306)
T PRK07792 61 GAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKA 139 (306)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 35788899999975432222222222 4579999999997542 2457778999999999999887532 0
Q ss_pred ------CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 153 ------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 153 ------~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
...++|++||...+... .
T Consensus 140 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 163 (306)
T PRK07792 140 KAAGGPVYGRIVNTSSEAGLVGP--------------------------------------------------------V 163 (306)
T ss_pred cccCCCCCcEEEEECCcccccCC--------------------------------------------------------C
Confidence 02478999887543211 1
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccC
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
....|+.+|...+.+++.+ ..|+++..+.|+. ..... .. .+ . ...... .....
T Consensus 164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~-------~~------~~----~-~~~~~~---~~~~~ 221 (306)
T PRK07792 164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMT-------AD------VF----G-DAPDVE---AGGID 221 (306)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchh-------hh------hc----c-ccchhh---hhccC
Confidence 1246999999999998765 4589999999973 11100 00 00 0 000000 01223
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCC----------------CCcccHHHHHHHHHHh
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSL----------------RNPVTLVSILDYGFVY 351 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~----------------~~~~s~~el~~~l~~~ 351 (399)
.+..+|+|.++..++..... .-.+.+|.+.++. ..+.+..|+.+.+.+.
T Consensus 222 ~~~pe~va~~v~~L~s~~~~-~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (306)
T PRK07792 222 PLSPEHVVPLVQFLASPAAA-EVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY 286 (306)
T ss_pred CCCHHHHHHHHHHHcCcccc-CCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence 45789999999888753221 1125666665431 0235666666666665
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-15 Score=141.20 Aligned_cols=166 Identities=13% Similarity=0.159 Sum_probs=116.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||+++++.|+++| ++|.+++|+.... +.+. ..+++++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 51 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAG---YEVWATARKAEDV---EALA------------------------AAGFTAVQL 51 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHH------------------------HCCCeEEEe
Confidence 689999999999999999999999 5568888865322 1111 134678899
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEecc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVSTA 163 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~SS~ 163 (399)
|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++++.+. +...++|++||.
T Consensus 52 Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~ 131 (274)
T PRK05693 52 DVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSV 131 (274)
T ss_pred eCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCc
Confidence 9996432111111111123468999999996532 2456778999999999999987652 234678888886
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
..+... .....|+.+|...+.+.+
T Consensus 132 ~~~~~~--------------------------------------------------------~~~~~Y~~sK~al~~~~~ 155 (274)
T PRK05693 132 SGVLVT--------------------------------------------------------PFAGAYCASKAAVHALSD 155 (274)
T ss_pred cccCCC--------------------------------------------------------CCccHHHHHHHHHHHHHH
Confidence 533211 113569999999998876
Q ss_pred Hh-----hCCCcEEEEecCceecCCC
Q 015874 244 QS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 244 ~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
.+ ..|+++++++||.|.++..
T Consensus 156 ~l~~e~~~~gi~v~~v~pg~v~t~~~ 181 (274)
T PRK05693 156 ALRLELAPFGVQVMEVQPGAIASQFA 181 (274)
T ss_pred HHHHHhhhhCeEEEEEecCccccccc
Confidence 55 3689999999999977543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.4e-15 Score=139.43 Aligned_cols=165 Identities=16% Similarity=0.094 Sum_probs=117.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||||+||++++++|+++| .+|.++.|+.+.. +.+.+.+ .+.++.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~--------------------~~~~~~~~~~ 55 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEG---WRVGAYDINEAGL---AALAAEL--------------------GAGNAWTGAL 55 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHh--------------------cCCceEEEEe
Confidence 689999999999999999999999 5568888875432 2111111 0257889999
Q ss_pred cCCCCCCCCCchhhHHHH----hcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 93 DISSEDLGLKDSNLKEEL----WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~----~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
|+++.+.. .+..... ..++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..++|
T Consensus 56 D~~~~~~v---~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 132 (260)
T PRK08267 56 DVTDRAAW---DAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVI 132 (260)
T ss_pred cCCCHHHH---HHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 99964421 1111122 3468999999997532 2456778999999999999887642 2457899
Q ss_pred EEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 159 HVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 159 ~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
++||... ++.. ....|+.+|..
T Consensus 133 ~isS~~~~~~~~---------------------------------------------------------~~~~Y~~sKaa 155 (260)
T PRK08267 133 NTSSASAIYGQP---------------------------------------------------------GLAVYSATKFA 155 (260)
T ss_pred EeCchhhCcCCC---------------------------------------------------------CchhhHHHHHH
Confidence 9888643 3321 13569999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
.+.+++.. ..++++++++||.+-...
T Consensus 156 ~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 156 VRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 99888765 457999999999986643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=134.72 Aligned_cols=227 Identities=15% Similarity=0.121 Sum_probs=143.8
Q ss_pred cCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
++||+++||||+ +.||.+++++|+++|+ +|.+..|+.+....++++.+++ ...
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~~~~~~~~~~~~~~----------------------~~~ 62 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDKARPYVEPLAEEL----------------------DAP 62 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCChhhHHHHHHHHHhh----------------------ccc
Confidence 578999999998 5999999999999994 5577777643222223322211 234
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~ 155 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+++++.+. .+..
T Consensus 63 ~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g 142 (258)
T PRK07533 63 IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG 142 (258)
T ss_pred eEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence 578999997654332233332334579999999996421 2457788999999999999987653 2335
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+++++||.+..... .....|+.+|
T Consensus 143 ~Ii~iss~~~~~~~--------------------------------------------------------~~~~~Y~asK 166 (258)
T PRK07533 143 SLLTMSYYGAEKVV--------------------------------------------------------ENYNLMGPVK 166 (258)
T ss_pred EEEEEeccccccCC--------------------------------------------------------ccchhhHHHH
Confidence 78888886432110 1134699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+..+.+.+.. ..++++..+.||.|-.+.... + .. .......... . .+ ...+...+|+|+
T Consensus 167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~---~-~~---~~~~~~~~~~-~---~p-----~~r~~~p~dva~ 230 (258)
T PRK07533 167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG---I-DD---FDALLEDAAE-R---AP-----LRRLVDIDDVGA 230 (258)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc---c-CC---cHHHHHHHHh-c---CC-----cCCCCCHHHHHH
Confidence 9999888765 468999999999886643211 0 00 0111111111 1 11 123467799999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.+..+.+.++
T Consensus 231 ~~~~L~s~~~~-~itG~~i~vdgg 253 (258)
T PRK07533 231 VAAFLASDAAR-RLTGNTLYIDGG 253 (258)
T ss_pred HHHHHhChhhc-cccCcEEeeCCc
Confidence 99988863221 112566666554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-14 Score=136.71 Aligned_cols=171 Identities=17% Similarity=0.177 Sum_probs=115.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++||||+|+||.++++.|++.| .+|.++.|+.... +...+++ .. .+.++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~~~~ 56 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEETA---KETAKEI---------NQ---------AGGKAVAYKL 56 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEEEEEc
Confidence 579999999999999999999999 5567777764322 1111111 00 1346888999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~v~~S 161 (399)
|+++++......+...+....+|+|||+|+.... .+.++..+++|+.++..+++++... +...++|++|
T Consensus 57 Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 57 DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9996442111111111223468999999987432 2456678999999998888776542 1236899988
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....... .....|+.+|.+.+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 160 (254)
T TIGR02415 137 SIAGHEGN--------------------------------------------------------PILSAYSSTKFAVRGL 160 (254)
T ss_pred chhhcCCC--------------------------------------------------------CCCcchHHHHHHHHHH
Confidence 86433211 1135699999999999
Q ss_pred HHHh-----hCCCcEEEEecCceecCC
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
++.. ..++++.+++||.+.++.
T Consensus 161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 161 TQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred HHHHHHHhcccCeEEEEEecCcccChh
Confidence 8755 347999999999886643
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=134.14 Aligned_cols=213 Identities=15% Similarity=0.162 Sum_probs=130.0
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|+||||+|+||.++++.|+++| .+|.++.|+... ..+.+.+.+ .... ....+.++++|
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~~--~~~~~~~~~---------~~~~-------~~~~~~~~~~D 59 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDAA--GLDAFAAEI---------NAAH-------GEGVAFAAVQD 59 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHHH---------HhcC-------CCceEEEEEee
Confidence 38999999999999999999999 556888887321 122222111 0000 01234567899
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHH----HHHHHHHHHHhccCCceEEEEec
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTL----GVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~----~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
+++++......+...+.+.++|+|||+|+.... .+.+...+++|+. .+..++.++++. +.++|+++||
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss 138 (251)
T PRK07069 60 VTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISS 138 (251)
T ss_pred cCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecC
Confidence 996543111111222234568999999997542 2345667888988 555556666553 5679999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+.... ....|+.+|...+.+.
T Consensus 139 ~~~~~~~~--------------------------------------------------------~~~~Y~~sK~a~~~~~ 162 (251)
T PRK07069 139 VAAFKAEP--------------------------------------------------------DYTAYNASKAAVASLT 162 (251)
T ss_pred hhhccCCC--------------------------------------------------------CCchhHHHHHHHHHHH
Confidence 87655321 1246999999999888
Q ss_pred HHh-----hC--CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 243 QQS-----KE--NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 243 ~~~-----~~--~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+ .. +++++.++||.+.++...+....... .........+ .....+.+.+|+|++++.+
T Consensus 163 ~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l 229 (251)
T PRK07069 163 KSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGE----EEATRKLARG---------VPLGRLGEPDDVAHAVLYL 229 (251)
T ss_pred HHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccc----hhHHHHHhcc---------CCCCCCcCHHHHHHHHHHH
Confidence 765 12 48899999999988654211000000 0011111111 1122356789999999987
Q ss_pred HH
Q 015874 316 MV 317 (399)
Q Consensus 316 ~~ 317 (399)
+.
T Consensus 230 ~~ 231 (251)
T PRK07069 230 AS 231 (251)
T ss_pred cC
Confidence 75
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-14 Score=133.54 Aligned_cols=199 Identities=14% Similarity=0.099 Sum_probs=130.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
-++++|+||||+|+||++++++|+++|. .+|.+++|+.+.. .+...+++ .. ....++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~--~~~~~~~l---------~~--------~~~~~v~~ 64 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPR--RDAAVAQM---------KA--------AGASSVEV 64 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchh--HHHHHHHH---------Hh--------cCCCceEE
Confidence 3578999999999999999999999852 3568888876531 11111111 00 01236889
Q ss_pred EeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCcc----cc---HHHHHHHhHHHHHHHHHH----HHhccCCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD----ER---YDVAFGINTLGVIHLVNF----AKKCVKLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~~----~~---~~~~~~~n~~~~~~ll~~----a~~~~~~~~ 156 (399)
+.+|+++++.. .+..+.+. .++|++||++|..... .. ....+++|+.++..+.+. +++. +..+
T Consensus 65 ~~~D~~~~~~~---~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~ 140 (253)
T PRK07904 65 IDFDALDTDSH---PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQ 140 (253)
T ss_pred EEecCCChHHH---HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCce
Confidence 99999975431 12222222 4799999999875321 11 224589999988876444 4442 5689
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.||+
T Consensus 141 iv~isS~~g~~~~--------------------------------------------------------~~~~~Y~~sKa 164 (253)
T PRK07904 141 IIAMSSVAGERVR--------------------------------------------------------RSNFVYGSTKA 164 (253)
T ss_pred EEEEechhhcCCC--------------------------------------------------------CCCcchHHHHH
Confidence 9999998532210 11246999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
....+.+.. ..++++++++||.|..+... . . . . ....+..+|+|+.
T Consensus 165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------~-----------~--~-----~----~~~~~~~~~~A~~ 215 (253)
T PRK07904 165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------H-----------A--K-----E----APLTVDKEDVAKL 215 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------c-----------C--C-----C----CCCCCCHHHHHHH
Confidence 988776544 46899999999999774320 0 0 0 0 0113678999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++.+
T Consensus 216 i~~~~~~ 222 (253)
T PRK07904 216 AVTAVAK 222 (253)
T ss_pred HHHHHHc
Confidence 9999974
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=135.78 Aligned_cols=230 Identities=13% Similarity=0.097 Sum_probs=140.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++||||+|+||.++++.|+++|+ .|.+..|+... ......+++ .. .+.++.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~~~~--~~~~~~~~l---------~~---------~~~~~~ 60 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDEE--EANDVAEEI---------KK---------AGGEAI 60 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHHH---------HH---------cCCeEE
Confidence 36889999999999999999999999994 45666665422 111111111 00 124677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh----ccCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK----CVKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~----~~~~~~~ 157 (399)
++.+|+++++......+.......++|++||+|+.... .+.++..+++|+.+...+++.+.+ .....++
T Consensus 61 ~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i 140 (261)
T PRK08936 61 AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI 140 (261)
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 88999997543111111111223468999999997432 145667789999888777665533 2124689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 141 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa 164 (261)
T PRK08936 141 INMSSVHEQIPW--------------------------------------------------------PLFVHYAASKGG 164 (261)
T ss_pred EEEccccccCCC--------------------------------------------------------CCCcccHHHHHH
Confidence 999986432211 223579999988
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..+++++.++||.|.++..... +... ........ . . ....+...+|+++++
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~-----~~~~~~~~-~---~-----~~~~~~~~~~va~~~ 228 (261)
T PRK08936 165 VKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK--FADP-----KQRADVES-M---I-----PMGYIGKPEEIAAVA 228 (261)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc--cCCH-----HHHHHHHh-c---C-----CCCCCcCHHHHHHHH
Confidence 88777655 4589999999999987653110 0000 01111111 1 1 112356678999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++....... .+..+.+.++
T Consensus 229 ~~l~s~~~~~~-~G~~i~~d~g 249 (261)
T PRK08936 229 AWLASSEASYV-TGITLFADGG 249 (261)
T ss_pred HHHcCcccCCc-cCcEEEECCC
Confidence 99886322211 2455666554
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-14 Score=138.39 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=118.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||.++++.|+++| .+|.+..|+..... ..++.
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~~------------------------------~~~~~ 52 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDGQ------------------------------HENYQ 52 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCccccc------------------------------cCceE
Confidence 4678999999999999999999999999 45577777654321 13677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
++.+|+++++......+.....+..+|+|||+||.... .+.++..+++|+.++..+++++.+.
T Consensus 53 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (266)
T PRK06171 53 FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQM 132 (266)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence 89999996543111111111223468999999996421 2456778999999999999988753
Q ss_pred --cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 015874 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (399)
Q Consensus 152 --~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
++..++|++||...+... ....
T Consensus 133 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 156 (266)
T PRK06171 133 VKQHDGVIVNMSSEAGLEGS--------------------------------------------------------EGQS 156 (266)
T ss_pred HhcCCcEEEEEccccccCCC--------------------------------------------------------CCCc
Confidence 234579999988654321 1135
Q ss_pred hhhHhHHHHHHHHHHh-----hCCCcEEEEecCcee
Q 015874 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (399)
Q Consensus 230 ~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~ 260 (399)
.|+.+|...+.+++.+ ..++++.+++||.+.
T Consensus 157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 7999999999988776 458999999999885
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=154.29 Aligned_cols=241 Identities=12% Similarity=0.108 Sum_probs=144.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||++++++|+++| .+|.++.|+.+.. +...+.+ .... ...++.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~~---~~~~~~l---------~~~~-------~~~~~~ 468 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEAA---EAVAAEI---------NGQF-------GAGRAV 468 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHHH---HHHHHHH---------Hhhc-------CCCcEE
Confidence 3578999999999999999999999999 4567887765432 1111111 1000 113567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~ 157 (399)
.+.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.+...+.+.+... .+ ..+|
T Consensus 469 ~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I 548 (676)
T TIGR02632 469 ALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI 548 (676)
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 88999996432111111111223479999999997532 1446777889999988877655432 12 3579
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 549 V~iSS~~a~~~~--------------------------------------------------------~~~~aY~aSKaA 572 (676)
T TIGR02632 549 VFIASKNAVYAG--------------------------------------------------------KNASAYSAAKAA 572 (676)
T ss_pred EEEeChhhcCCC--------------------------------------------------------CCCHHHHHHHHH
Confidence 999986433211 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcchHHHHHHH-hhcCccccccCCCccccCeeeHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKTINTLFVA-SAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+++.+ ..+++++.++|+.|+.... .. ..|... ..... .........+........+++.+|+|+
T Consensus 573 ~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~ 646 (676)
T TIGR02632 573 EAHLARCLAAEGGTYGIRVNTVNPDAVLQGSG-IWDGEWREE-----RAAAYGIPADELEEHYAKRTLLKRHIFPADIAE 646 (676)
T ss_pred HHHHHHHHHHHhcccCeEEEEEECCceecCcc-cccccchhh-----hhhcccCChHHHHHHHHhcCCcCCCcCHHHHHH
Confidence 99999876 3579999999999873211 11 111100 00000 000000001111122345688999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..... ...+.++++.++
T Consensus 647 av~~L~s~~~~-~~TG~~i~vDGG 669 (676)
T TIGR02632 647 AVFFLASSKSE-KTTGCIITVDGG 669 (676)
T ss_pred HHHHHhCCccc-CCcCcEEEECCC
Confidence 99988753222 223678888876
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=150.81 Aligned_cols=227 Identities=14% Similarity=0.166 Sum_probs=148.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
...||+++||||+|+||.+++++|+++| .+|.+..|+.+.. +...+++ ..++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 318 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDAEGA---KKLAEAL---------------------GDEHL 318 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCcee
Confidence 4578999999999999999999999999 5568888865322 2221111 24567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
.+.+|+++++......+...+.+..+|++||+||.... .+.++..+++|+.++.++++++... .+..+||+
T Consensus 319 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~ 398 (520)
T PRK06484 319 SVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN 398 (520)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence 78999997553222222222223568999999997521 2457788999999999999988763 34468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+.+... .....|+.+|+..+
T Consensus 399 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 422 (520)
T PRK06484 399 LGSIASLLAL--------------------------------------------------------PPRNAYCASKAAVT 422 (520)
T ss_pred ECchhhcCCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9998654321 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.. ..|++++.+.||.|.++..... ... .. ........ ..+ ...+...+|+|++++.
T Consensus 423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~-~~--~~~~~~~~----~~~-----~~~~~~~~dia~~~~~ 487 (520)
T PRK06484 423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL---KAS-GR--ADFDSIRR----RIP-----LGRLGDPEEVAEAIAF 487 (520)
T ss_pred HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh---ccc-cH--HHHHHHHh----cCC-----CCCCcCHHHHHHHHHH
Confidence 998876 4589999999999977543110 000 00 00111111 010 1124678999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+.+.++
T Consensus 488 l~s~~~~-~~~G~~i~vdgg 506 (520)
T PRK06484 488 LASPAAS-YVNGATLTVDGG 506 (520)
T ss_pred HhCcccc-CccCcEEEECCC
Confidence 8863222 222677887765
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-14 Score=131.83 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=137.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|++|||||+|+||+++++.|+++| ++|.++.|+... ..+...+++ . ....++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~~-------------~-----~~~~~~~~~~~ 57 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNEE--RAEAWLQEQ-------------G-----ALGFDFRVVEG 57 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHHH-------------H-----hhCCceEEEEe
Confidence 589999999999999999999999 456777773211 111111110 0 01257889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
|+++++......+...+....+|+|||+||.... .+.+...++.|+.++..+++.+... .+..++|++||
T Consensus 58 D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss 137 (242)
T TIGR01829 58 DVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS 137 (242)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 9996432111111111223468999999986531 2456677889999988877665432 25678999998
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
....... .....|+.+|...+.++
T Consensus 138 ~~~~~~~--------------------------------------------------------~~~~~y~~sk~a~~~~~ 161 (242)
T TIGR01829 138 VNGQKGQ--------------------------------------------------------FGQTNYSAAKAGMIGFT 161 (242)
T ss_pred hhhcCCC--------------------------------------------------------CCcchhHHHHHHHHHHH
Confidence 6432211 11356999999888777
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..+++++.++|+.+.++...... .........+ . ....+...+|+++++..++.
T Consensus 162 ~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~----~-----~~~~~~~~~~~a~~~~~l~~ 223 (242)
T TIGR01829 162 KALAQEGATKGVTVNTISPGYIATDMVMAMR---------EDVLNSIVAQ----I-----PVGRLGRPEEIAAAVAFLAS 223 (242)
T ss_pred HHHHHHhhhhCeEEEEEeeCCCcCccccccc---------hHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHcC
Confidence 665 45899999999999876542110 0111111111 0 11123456899999877765
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
.... .-.++.+.+.++
T Consensus 224 ~~~~-~~~G~~~~~~gg 239 (242)
T TIGR01829 224 EEAG-YITGATLSINGG 239 (242)
T ss_pred chhc-CccCCEEEecCC
Confidence 3221 122677887775
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.3e-15 Score=138.67 Aligned_cols=171 Identities=16% Similarity=0.169 Sum_probs=118.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||+|+||++++++|+++| ++|.+..|+.+.. +.+.+ . .+.++.+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~l~~-------------~--------~~~~~~~ 55 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAAGL---QELEA-------------A--------HGDAVVG 55 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHh-------------h--------cCCceEE
Confidence 578999999999999999999999999 4567777765322 11111 0 1246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----c---c-----ccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F---D-----ERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~---~-----~~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
+++|+++++......+...+.+.++|++||+||... . + +.++..+++|+.++..+++++.+. +...
T Consensus 56 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g 135 (262)
T TIGR03325 56 VEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRG 135 (262)
T ss_pred EEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCC
Confidence 999999643211111111122357899999998632 1 1 246678999999999999988763 1235
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+... .....|+.+|
T Consensus 136 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 159 (262)
T TIGR03325 136 SVIFTISNAGFYPN--------------------------------------------------------GGGPLYTAAK 159 (262)
T ss_pred CEEEEeccceecCC--------------------------------------------------------CCCchhHHHH
Confidence 68888876543211 1124699999
Q ss_pred HHHHHHHHHh----hCCCcEEEEecCceecCC
Q 015874 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 236 ~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~ 263 (399)
...+.+++.+ ...+++..+.||.|..+.
T Consensus 160 aa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 160 HAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred HHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 9999999876 234899999999998754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9e-15 Score=138.75 Aligned_cols=233 Identities=13% Similarity=0.158 Sum_probs=144.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|+||.++++.|+++| ++|.+..|+.+.. +.+.+.+ +.++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~~ 56 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAEKL---ASLRQRF---------------------GDHVLV 56 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCcceE
Confidence 678999999999999999999999999 4567888875432 2222111 246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------c-c----cHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------D-E----RYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~-~----~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
+++|+++++......+...+.+.++|++||+||.... . + .++..+++|+.+...+++++.+. +...
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 136 (263)
T PRK06200 57 VEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG 136 (263)
T ss_pred EEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC
Confidence 9999997543111111111223468999999996421 1 1 25667889999999999888653 1335
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+... .....|+.+|
T Consensus 137 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 160 (263)
T PRK06200 137 SMIFTLSNSSFYPG--------------------------------------------------------GGGPLYTASK 160 (263)
T ss_pred EEEEECChhhcCCC--------------------------------------------------------CCCchhHHHH
Confidence 79999988655421 1124699999
Q ss_pred HHHHHHHHHh----hCCCcEEEEecCceecCCCCCCC-Cccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFP-GWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 236 ~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
.+.+.+++.. ..++++..+.||.|..+...... +... ....... ........ . ...-+...+|+|
T Consensus 161 ~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~-----p~~r~~~~~eva 231 (263)
T PRK06200 161 HAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPG-LADMIAAI---T-----PLQFAPQPEDHT 231 (263)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccc-hhHHhhcC---C-----CCCCCCCHHHHh
Confidence 9999998876 34599999999999765431100 0000 0000000 00001100 0 112356778999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++.......-.+..+.+.++
T Consensus 232 ~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 232 GPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred hhhhheecccccCcccceEEEEcCc
Confidence 9999888633121112566777654
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=135.93 Aligned_cols=228 Identities=13% Similarity=0.085 Sum_probs=142.8
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.||+|+||||+ +.||.++++.|+++|+ +|.+..|+....+..+.+.+ +. +..
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~~~~~~~~~~~~-------------~~--------~~~ 57 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNEALKKRVEPIAQ-------------EL--------GSD 57 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCHHHHHHHHHHHH-------------hc--------CCc
Confidence 3578999999997 7999999999999994 55666776321112222211 11 123
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-------~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
.++++|+++++......+...+.+.++|++||+||... + .+.++..+++|+.+...+.+++.+. ...
T Consensus 58 -~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~ 136 (274)
T PRK08415 58 -YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG 136 (274)
T ss_pred -eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC
Confidence 56889999765422222222223457899999999642 1 2457788999999999999887763 233
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+..... .....|+.+
T Consensus 137 g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 160 (274)
T PRK08415 137 ASVLTLSYLGGVKYV--------------------------------------------------------PHYNVMGVA 160 (274)
T ss_pred CcEEEEecCCCccCC--------------------------------------------------------CcchhhhhH
Confidence 689999986422110 112469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|+..+.+.+.. ..|+++..+.||.|-.+...... .. .. ........ .+ ..-+...+|+|
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~~---~~-~~~~~~~~---~p-----l~r~~~pedva 224 (274)
T PRK08415 161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG----DF---RM-ILKWNEIN---AP-----LKKNVSIEEVG 224 (274)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc----hh---hH-Hhhhhhhh---Cc-----hhccCCHHHHH
Confidence 99999988866 45899999999998764321000 00 00 00000000 01 11246679999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.+..+.+.++
T Consensus 225 ~~v~fL~s~~~~~-itG~~i~vdGG 248 (274)
T PRK08415 225 NSGMYLLSDLSSG-VTGEIHYVDAG 248 (274)
T ss_pred HHHHHHhhhhhhc-ccccEEEEcCc
Confidence 9999988742221 12566777665
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.2e-14 Score=131.00 Aligned_cols=203 Identities=15% Similarity=0.086 Sum_probs=133.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++|+||||+|+||++++++|+++| .+|.++.|+.+.. +...+++ .+. ....+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~~---~~~~~~l---------~~~--------~~~~~~ 59 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKKL---EKVYDAI---------VEA--------GHPEPF 59 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHHH---HHHHHHH---------HHc--------CCCCcc
Confidence 4678999999999999999999999999 5568888876432 2222211 000 113456
Q ss_pred EEeccCCCCCCCCCchhhH---HHHh-cCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 89 FVPGDISSEDLGLKDSNLK---EELW-NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~---~~~~-~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
++.+|+++.+. .+..... ...+ .++|+|||+||.... .+.+...+++|+.++.++++++.+. .+
T Consensus 60 ~~~~D~~~~~~-~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 138 (239)
T PRK08703 60 AIRFDLMSAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP 138 (239)
T ss_pred eEEeeecccch-HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC
Confidence 77889875210 0011111 1122 468999999996421 2456677899999999998887653 13
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+++++||...... ......|+.
T Consensus 139 ~~~iv~~ss~~~~~~--------------------------------------------------------~~~~~~Y~~ 162 (239)
T PRK08703 139 DASVIFVGESHGETP--------------------------------------------------------KAYWGGFGA 162 (239)
T ss_pred CCEEEEEeccccccC--------------------------------------------------------CCCccchHH
Confidence 468899888532210 011246999
Q ss_pred hHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 234 TKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 234 sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
+|++.+.+++.+ . .++++++++||.|.++.... . .++. ....+...+|
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~---~---------------------~~~~--~~~~~~~~~~ 216 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK---S---------------------HPGE--AKSERKSYGD 216 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc---c---------------------CCCC--CccccCCHHH
Confidence 999999998765 1 26999999999999865311 0 0010 1123467889
Q ss_pred HHHHHHHHHH
Q 015874 308 VVNAMIVAMV 317 (399)
Q Consensus 308 va~~i~~~~~ 317 (399)
++.++..++.
T Consensus 217 ~~~~~~~~~~ 226 (239)
T PRK08703 217 VLPAFVWWAS 226 (239)
T ss_pred HHHHHHHHhC
Confidence 9999998886
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=135.24 Aligned_cols=228 Identities=12% Similarity=0.110 Sum_probs=143.4
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.+|+++||||+ +.||.+++++|+++|+ +|++..|+....+..+.+.+ +. ..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~~~~~~~~~l~~-------------~~---------~~ 61 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGDALKKRVEPLAA-------------EL---------GA 61 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCchHHHHHHHHHHH-------------hc---------CC
Confidence 4678999999997 8999999999999995 45666664221112222221 11 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
...+++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. .+.
T Consensus 62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 141 (272)
T PRK08159 62 FVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG 141 (272)
T ss_pred ceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 4568899997654222222222233568999999997531 2457788999999999999987763 334
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+..... +....|+.+
T Consensus 142 g~Iv~iss~~~~~~~--------------------------------------------------------p~~~~Y~as 165 (272)
T PRK08159 142 GSILTLTYYGAEKVM--------------------------------------------------------PHYNVMGVA 165 (272)
T ss_pred ceEEEEeccccccCC--------------------------------------------------------CcchhhhhH
Confidence 688999886432110 113469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|+..+.+.+.. ..++++..+.||.|........ .... ......... .+ ...+...+|+|
T Consensus 166 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~----~~~~----~~~~~~~~~---~p-----~~r~~~peevA 229 (272)
T PRK08159 166 KAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI----GDFR----YILKWNEYN---AP-----LRRTVTIEEVG 229 (272)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC----Ccch----HHHHHHHhC---Cc-----ccccCCHHHHH
Confidence 99999888765 4689999999999876422110 0000 011111000 11 11246779999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..+.+.++
T Consensus 230 ~~~~~L~s~~~~-~itG~~i~vdgG 253 (272)
T PRK08159 230 DSALYLLSDLSR-GVTGEVHHVDSG 253 (272)
T ss_pred HHHHHHhCcccc-CccceEEEECCC
Confidence 999999863222 222677777776
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-13 Score=129.91 Aligned_cols=224 Identities=17% Similarity=0.170 Sum_probs=159.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||+|+++++.|+++| +.|.+.+|+.+...... ..++++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~~~~~----------------------------~~v~~~~~ 49 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAAAALA----------------------------GGVEVVLG 49 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHHHhhc----------------------------CCcEEEEe
Confidence 579999999999999999999999 66799999987653221 47889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|+. +.+.+.....++|.++++.+... ... ...........+..+.+. .+.++++++|...+..
T Consensus 50 d~~-------~~~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~----- 112 (275)
T COG0702 50 DLR-------DPKSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADA----- 112 (275)
T ss_pred ccC-------CHhHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCC-----
Confidence 999 55666677889999999988654 332 112233334444444444 2577888888775432
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~ 252 (399)
..+..|..+|..+|.++.. .+++.+
T Consensus 113 -----------------------------------------------------~~~~~~~~~~~~~e~~l~~--sg~~~t 137 (275)
T COG0702 113 -----------------------------------------------------ASPSALARAKAAVEAALRS--SGIPYT 137 (275)
T ss_pred -----------------------------------------------------CCccHHHHHHHHHHHHHHh--cCCCeE
Confidence 1246799999999999998 689999
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
++|+...|...... +.........+.+. -+......+..+|++.++..++.... . .+++|.++
T Consensus 138 ~lr~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~~~~~~~~i~~~d~a~~~~~~l~~~~-~--~~~~~~l~ 200 (275)
T COG0702 138 TLRRAAFYLGAGAA-------------FIEAAEAAGLPVIP-RGIGRLSPIAVDDVAEALAAALDAPA-T--AGRTYELA 200 (275)
T ss_pred EEecCeeeeccchh-------------HHHHHHhhCCceec-CCCCceeeeEHHHHHHHHHHHhcCCc-c--cCcEEEcc
Confidence 99977776644311 02122222222221 12237899999999999999887433 2 26899999
Q ss_pred CCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 333 SSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 333 ~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
++ ...+..++++.+....+++...
T Consensus 201 g~--~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 201 GP--EALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred CC--ceecHHHHHHHHHHHhCCccee
Confidence 98 6799999999999999986544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.8e-14 Score=133.16 Aligned_cols=227 Identities=14% Similarity=0.109 Sum_probs=141.4
Q ss_pred cCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+++|++|||||++ .||.+++++|+++|+ +|.+..|+.......+.+. +.. ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga---~V~~~~r~~~~~~~~~~~~-------------~~~---------g~~ 59 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQGEALGKRVKPLA-------------ESL---------GSD 59 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC---EEEEecCchHHHHHHHHHH-------------Hhc---------CCc
Confidence 6789999999997 999999999999995 4566666532111111111 110 123
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~ 155 (399)
.++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+..++++++.+. .+..
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G 139 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG 139 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc
Confidence 468899997654222222222234579999999996421 2457788999999999998877653 2235
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||.+..... +....|+.+|
T Consensus 140 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 163 (271)
T PRK06505 140 SMLTLTYGGSTRVM--------------------------------------------------------PNYNVMGVAK 163 (271)
T ss_pred eEEEEcCCCccccC--------------------------------------------------------CccchhhhhH
Confidence 79999887532110 1134699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.|-.+.... +... .... ....... + ..-+...+|+|+
T Consensus 164 aAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~---~~~~----~~~~-~~~~~~~---p-----~~r~~~peeva~ 227 (271)
T PRK06505 164 AALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG---IGDA----RAIF-SYQQRNS---P-----LRRTVTIDEVGG 227 (271)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc---Ccch----HHHH-HHHhhcC---C-----ccccCCHHHHHH
Confidence 9999888766 458999999999987653211 0000 0011 1111111 1 112356789999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++.... ..-.+....+.++
T Consensus 228 ~~~fL~s~~~-~~itG~~i~vdgG 250 (271)
T PRK06505 228 SALYLLSDLS-SGVTGEIHFVDSG 250 (271)
T ss_pred HHHHHhCccc-cccCceEEeecCC
Confidence 9999886322 1112566777665
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-14 Score=132.82 Aligned_cols=230 Identities=13% Similarity=0.095 Sum_probs=144.1
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.||+++||||+ +.||.+++++|+++|+ +|.+..|+......++++.+++ ...+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~~~~~--------------------~~~~ 60 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERLEKEVRELADTL--------------------EGQE 60 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCcccchHHHHHHHHHc--------------------CCCc
Confidence 4678999999997 8999999999999995 5577666533222333332211 0246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++++|+++++......+...+.+.++|++||+||.... .+.+...+++|+.+...+++++.+. .+.
T Consensus 61 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (257)
T PRK08594 61 SLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG 140 (257)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC
Confidence 7889999997654222222222233569999999986421 1345667889999999988887653 233
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||....... .....|+.+
T Consensus 141 g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 164 (257)
T PRK08594 141 GSIVTLTYLGGERVV--------------------------------------------------------QNYNVMGVA 164 (257)
T ss_pred ceEEEEcccCCccCC--------------------------------------------------------CCCchhHHH
Confidence 589999987532110 112469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..|+++..+.||.|-.+.......+ . ........ . . ....+...+|+|
T Consensus 165 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~---~~~~~~~~-~---~-----p~~r~~~p~~va 228 (257)
T PRK08594 165 KASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF----N---SILKEIEE-R---A-----PLRRTTTQEEVG 228 (257)
T ss_pred HHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc----c---HHHHHHhh-c---C-----CccccCCHHHHH
Confidence 99999998765 4589999999999876432100000 0 00111100 0 0 112346778999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.+..+.+.++
T Consensus 229 ~~~~~l~s~~~~~-~tG~~~~~dgg 252 (257)
T PRK08594 229 DTAAFLFSDLSRG-VTGENIHVDSG 252 (257)
T ss_pred HHHHHHcCccccc-ccceEEEECCc
Confidence 9999988633221 12566666554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.7e-14 Score=133.07 Aligned_cols=228 Identities=16% Similarity=0.126 Sum_probs=140.7
Q ss_pred hcCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+++|+++|||| ++.||.+++++|+++|.+ |.+..|.....+.++.+.+ +. ..
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~~~~~~~~~~-------------~~---------~~ 57 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAE---LAFTYVVDKLEERVRKMAA-------------EL---------DS 57 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCcHHHHHHHHHHHh-------------cc---------CC
Confidence 478899999997 679999999999999954 4555554211111111111 10 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------c----ccHHHHHHHhHHHHHHHHHHHHhc--c
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------D----ERYDVAFGINTLGVIHLVNFAKKC--V 152 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~----~~~~~~~~~n~~~~~~ll~~a~~~--~ 152 (399)
...+++|+++++......+...+.+.++|++||+||.... . +.++..+++|+.+...+.+.+... .
T Consensus 58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~ 137 (261)
T PRK08690 58 ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG 137 (261)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence 4578999997664332233332334579999999997531 1 235566788999988888876553 1
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
...++|++||.+..... +....|+
T Consensus 138 ~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (261)
T PRK08690 138 RNSAIVALSYLGAVRAI--------------------------------------------------------PNYNVMG 161 (261)
T ss_pred cCcEEEEEcccccccCC--------------------------------------------------------CCcccch
Confidence 23578899887543211 1135699
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|...+.+.+.. ..|+++..+.||.|-.+... .+... ......... .. ....+...+|
T Consensus 162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~~~~----~~~~~~~~~-~~--------p~~r~~~pee 225 (261)
T PRK08690 162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GIADF----GKLLGHVAA-HN--------PLRRNVTIEE 225 (261)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cCCch----HHHHHHHhh-cC--------CCCCCCCHHH
Confidence 9999999887755 56899999999998764321 11000 011111111 11 1123567899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+++..++..... .-.+..+-+.++
T Consensus 226 vA~~v~~l~s~~~~-~~tG~~i~vdgG 251 (261)
T PRK08690 226 VGNTAAFLLSDLSS-GITGEITYVDGG 251 (261)
T ss_pred HHHHHHHHhCcccC-CcceeEEEEcCC
Confidence 99999999873222 112566766655
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.2e-14 Score=133.43 Aligned_cols=231 Identities=14% Similarity=0.096 Sum_probs=143.1
Q ss_pred hhcCCcEEEEecCcc-hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTG-FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG-~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+++++++||||+| .||+++++.|+++|+ +|.+..|+..+. ++..+.+ .... ...+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~---~V~~~~~~~~~~---~~~~~~~---------~~~~-------~~~~ 70 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA---RVVISDIHERRL---GETADEL---------AAEL-------GLGR 70 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC---EEEEEeCCHHHH---HHHHHHH---------HHhc-------CCce
Confidence 467789999999998 699999999999995 457777765332 1111111 1111 1146
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~ 155 (399)
+.++++|+++++......+.....+..+|+|||+||.... .+.+...+++|+.+...+++++.+. .. ..
T Consensus 71 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g 150 (262)
T PRK07831 71 VEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG 150 (262)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 8889999996432111111111223468999999996421 2457778899999999998887652 12 45
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+++++||...+... .....|+.+|
T Consensus 151 ~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK 174 (262)
T PRK07831 151 VIVNNASVLGWRAQ--------------------------------------------------------HGQAHYAAAK 174 (262)
T ss_pred EEEEeCchhhcCCC--------------------------------------------------------CCCcchHHHH
Confidence 78888776432211 1234699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
++.+.+++.+ ..++++..++||.+..+.... ... ........... ...-+...+|+|+
T Consensus 175 aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~---~~~-----~~~~~~~~~~~---------~~~r~~~p~~va~ 237 (262)
T PRK07831 175 AGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK---VTS-----AELLDELAARE---------AFGRAAEPWEVAN 237 (262)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc---ccC-----HHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence 9999998866 368999999999998764311 000 11122221111 0122456789999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.|..+.+.++
T Consensus 238 ~~~~l~s~~~~-~itG~~i~v~~~ 260 (262)
T PRK07831 238 VIAFLASDYSS-YLTGEVVSVSSQ 260 (262)
T ss_pred HHHHHcCchhc-CcCCceEEeCCC
Confidence 99998863221 112566666553
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.1e-14 Score=150.65 Aligned_cols=203 Identities=15% Similarity=0.171 Sum_probs=139.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||.+++++|+++| .+|.++.|+.+.. +...+++ .. .+.++.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 423 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEAL---DELVAEI---------RA---------KGGTAH 423 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4678999999999999999999999999 5668888875432 2211111 00 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+.....+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 424 ~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 503 (657)
T PRK07201 424 AYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH 503 (657)
T ss_pred EEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence 89999996442111111111123469999999996421 1356778999999999988876542 24578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||.+.+.... ....|+.+|+
T Consensus 504 iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~~sK~ 527 (657)
T PRK07201 504 VVNVSSIGVQTNAP--------------------------------------------------------RFSAYVASKA 527 (657)
T ss_pred EEEECChhhcCCCC--------------------------------------------------------CcchHHHHHH
Confidence 99999997765321 1356999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+++.+ ..++++++++||.|.++...+. . .. . ....+..+++|+.
T Consensus 528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~----~------------------~~-~----~~~~~~~~~~a~~ 580 (657)
T PRK07201 528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT----K------------------RY-N----NVPTISPEEAADM 580 (657)
T ss_pred HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc----c------------------cc-c----CCCCCCHHHHHHH
Confidence 999998765 4589999999999977543110 0 00 0 1235678999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++..+..
T Consensus 581 i~~~~~~ 587 (657)
T PRK07201 581 VVRAIVE 587 (657)
T ss_pred HHHHHHh
Confidence 9988764
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-14 Score=134.68 Aligned_cols=240 Identities=12% Similarity=0.084 Sum_probs=144.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++||||+|+||.++++.|+++|+ +|.+..|+.++... ..+++ .+.. ...++.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~---~~~~~---------~~~~-------~~~~~~ 62 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEERLAS---AEARL---------REKF-------PGARLL 62 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHHHHH---HHHHH---------HhhC-------CCceEE
Confidence 46789999999999999999999999994 56888887643321 11111 1110 124678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.+...+++|+.+...+++.+.+. .+..++|
T Consensus 63 ~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 142 (265)
T PRK07062 63 AARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV 142 (265)
T ss_pred EEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence 89999997543221112222233568999999997432 2357777899999888888776542 2346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 143 ~isS~~~~~~~--------------------------------------------------------~~~~~y~asKaal 166 (265)
T PRK07062 143 CVNSLLALQPE--------------------------------------------------------PHMVATSAARAGL 166 (265)
T ss_pred EeccccccCCC--------------------------------------------------------CCchHhHHHHHHH
Confidence 99998644321 1124699999988
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCC-CCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
+.+.+.. ..|++++.++||.|-.+.... +..................... .+ ....+...+|+|+++
T Consensus 167 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----p~~r~~~p~~va~~~ 239 (265)
T PRK07062 167 LNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK--GI-----PLGRLGRPDEAARAL 239 (265)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcC--CC-----CcCCCCCHHHHHHHH
Confidence 8887654 468999999999987653210 0000000000001111110000 01 112356778999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++..... .-.+.++.+.++
T Consensus 240 ~~L~s~~~~-~~tG~~i~vdgg 260 (265)
T PRK07062 240 FFLASPLSS-YTTGSHIDVSGG 260 (265)
T ss_pred HHHhCchhc-ccccceEEEcCc
Confidence 988753221 112567777665
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6e-14 Score=135.27 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=141.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
.+++|+++||||++.||.+++++|+++|+ +|.+..|+.. .....+...+++ ..
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~~~~~~~~~~~~~~~~~~~~l---------~~--------- 61 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSASGGSAAQAVVDEI---------VA--------- 61 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCCccccccccchhHHHHHHHHH---------Hh---------
Confidence 47899999999999999999999999995 4566665531 111222222211 00
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
.+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++... .
T Consensus 62 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 141 (286)
T PRK07791 62 AGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAE 141 (286)
T ss_pred cCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence 12467788999997553221122222223578999999997531 2567888999999999998877542 1
Q ss_pred C------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 153 K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 153 ~------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
. ..+||++||.+..... .
T Consensus 142 ~~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~ 165 (286)
T PRK07791 142 SKAGRAVDARIINTSSGAGLQGS--------------------------------------------------------V 165 (286)
T ss_pred cccCCCCCcEEEEeCchhhCcCC--------------------------------------------------------C
Confidence 1 2479999987533211 1
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccC
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
....|+.+|.+.+.+.+.. ..|++++.+.|+ +..+.. .. ....... .. . .....
T Consensus 166 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~-------~~------~~~~~~~-~~----~--~~~~~ 224 (286)
T PRK07791 166 GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT-------ET------VFAEMMA-KP----E--EGEFD 224 (286)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc-------hh------hHHHHHh-cC----c--ccccC
Confidence 1246999999999888765 468999999998 422111 10 0111111 00 0 11123
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
....+|+|++++.++...... -.+..+.+.++
T Consensus 225 ~~~pedva~~~~~L~s~~~~~-itG~~i~vdgG 256 (286)
T PRK07791 225 AMAPENVSPLVVWLGSAESRD-VTGKVFEVEGG 256 (286)
T ss_pred CCCHHHHHHHHHHHhCchhcC-CCCcEEEEcCC
Confidence 567899999999988632221 12677777766
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-13 Score=129.18 Aligned_cols=227 Identities=15% Similarity=0.116 Sum_probs=139.8
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCc--------ccHHHHHHHHHhhhhhHHHHHhhhccc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADI--------DSAALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
.++||+|+||||+| .||.+++++|+++|. +|.+..|.... .....+..+++ . .
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~---~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~- 65 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGA---DIFFTYWTAYDKEMPWGVDQDEQIQLQEEL---------L----K- 65 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEecccccccccccccHHHHHHHHHHH---------H----h-
Confidence 47899999999995 899999999999995 45655443210 00111111111 0 0
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK- 150 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~- 150 (399)
.+.++.++++|+++.+...+..+...+....+|++||+||.... .+.++..+++|+.+...+.+.+.+
T Consensus 66 ----~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 141 (256)
T PRK12859 66 ----NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG 141 (256)
T ss_pred ----cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 13578889999997553222222222223458999999996532 245677799999999988765543
Q ss_pred c--cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 015874 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (399)
Q Consensus 151 ~--~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
+ ++..+||++||....... .+.
T Consensus 142 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 165 (256)
T PRK12859 142 FDKKSGGRIINMTSGQFQGPM--------------------------------------------------------VGE 165 (256)
T ss_pred HhhcCCeEEEEEcccccCCCC--------------------------------------------------------CCc
Confidence 2 134589999997543211 223
Q ss_pred chhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCee
Q 015874 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (399)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 303 (399)
..|+.+|++.+.+++.. ..+++++.++||.+-++.. .. ........ ..+ ...+.
T Consensus 166 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~-------~~-----~~~~~~~~----~~~-----~~~~~ 224 (256)
T PRK12859 166 LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM-------TE-----EIKQGLLP----MFP-----FGRIG 224 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC-------CH-----HHHHHHHh----cCC-----CCCCc
Confidence 57999999999998766 4589999999998865422 10 01111111 111 12235
Q ss_pred eHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 304 ~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..+|+|+++..++.... ..-.+..+.+.++
T Consensus 225 ~~~d~a~~~~~l~s~~~-~~~~G~~i~~dgg 254 (256)
T PRK12859 225 EPKDAARLIKFLASEEA-EWITGQIIHSEGG 254 (256)
T ss_pred CHHHHHHHHHHHhCccc-cCccCcEEEeCCC
Confidence 67899999998875322 1112566666554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=131.29 Aligned_cols=227 Identities=14% Similarity=0.134 Sum_probs=139.8
Q ss_pred cCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
++||+++||||++ .||.++++.|+++|++ |....|+.......+.+.+ . ....
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~---vil~~r~~~~~~~~~~~~~-------------~---------~~~~ 58 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDKLKGRVEEFAA-------------Q---------LGSD 58 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE---EEEEecchhHHHHHHHHHh-------------c---------cCCc
Confidence 6889999999985 8999999999999954 4555665211111222111 0 1245
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+.+++..+ ...
T Consensus 59 ~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 138 (262)
T PRK07984 59 IVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 138 (262)
T ss_pred eEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence 678899997553222222221223468999999986421 1345677889999998888887653 223
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+..... .....|+.+
T Consensus 139 g~Iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~as 162 (262)
T PRK07984 139 SALLTLSYLGAERAI--------------------------------------------------------PNYNVMGLA 162 (262)
T ss_pred cEEEEEecCCCCCCC--------------------------------------------------------CCcchhHHH
Confidence 578899887532110 113469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..++++..+.||.|-.+.... + .. .......... . .+ ...+...+|+|
T Consensus 163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~-~~---~~~~~~~~~~-~---~p-----~~r~~~pedva 226 (262)
T PRK07984 163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG---I-KD---FRKMLAHCEA-V---TP-----IRRTVTIEDVG 226 (262)
T ss_pred HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc---C-Cc---hHHHHHHHHH-c---CC-----CcCCCCHHHHH
Confidence 99999998866 458999999999986642210 0 00 0011111111 0 11 12346779999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..+.+.++
T Consensus 227 ~~~~~L~s~~~~-~itG~~i~vdgg 250 (262)
T PRK07984 227 NSAAFLCSDLSA-GISGEVVHVDGG 250 (262)
T ss_pred HHHHHHcCcccc-cccCcEEEECCC
Confidence 999998863222 222566777665
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.5e-14 Score=137.98 Aligned_cols=190 Identities=14% Similarity=0.110 Sum_probs=126.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+++||||||+||.+++++|+++| .+|++.+|+.++.+. ..+++ .+.. ...++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~~~~---~~~~l---------~~~~-------~~~~v 67 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAKGEA---AVAAI---------RTAV-------PDAKL 67 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHH---HHHHH---------HHhC-------CCCce
Confidence 45789999999999999999999999999 566888887653321 11111 1110 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
.++.+|+++++......+.+.+...++|++||+||.... .+.++..+++|+.+...+++.+.+. ....++|+
T Consensus 68 ~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~ 147 (313)
T PRK05854 68 SLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTS 147 (313)
T ss_pred EEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 899999997543222222222223468999999997532 2567788999999999998887642 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... +...++.+. ....+...|+.||.+.+
T Consensus 148 vsS~~~~~~~---~~~~~~~~~-----------------------------------------~~~~~~~~Y~~SK~a~~ 183 (313)
T PRK05854 148 QSSIAARRGA---INWDDLNWE-----------------------------------------RSYAGMRAYSQSKIAVG 183 (313)
T ss_pred EechhhcCCC---cCccccccc-----------------------------------------ccCcchhhhHHHHHHHH
Confidence 9987543211 111111100 01122357999999999
Q ss_pred HHHHHh-------hCCCcEEEEecCceecCC
Q 015874 240 MLMQQS-------KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 240 ~~l~~~-------~~~~~~~i~Rp~~V~G~~ 263 (399)
.+.+.. ..++.+..+.||.|-...
T Consensus 184 ~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 184 LFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred HHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 988765 246999999999997654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=130.08 Aligned_cols=228 Identities=12% Similarity=0.106 Sum_probs=140.9
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.++||+++||||++ .||.++++.|+++|+ +|....|+....+..+.+.+ +. ..
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~---~v~~~~r~~~~~~~~~~l~~-------------~~---------g~ 59 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQSEVLEKRVKPLAE-------------EI---------GC 59 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCC---EEEEEeCchHHHHHHHHHHH-------------hc---------CC
Confidence 35789999999997 899999999999995 45666665221111222111 10 11
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-------~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
..++++|+++++......+...+.+.++|++||+|+... + .+.++..+++|+.+...+++.+.+. .+.
T Consensus 60 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~ 139 (260)
T PRK06603 60 NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG 139 (260)
T ss_pred ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 235789999765432222222233456999999998642 1 2457778999999999999877542 233
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+..... .....|+.+
T Consensus 140 G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 163 (260)
T PRK06603 140 GSIVTLTYYGAEKVI--------------------------------------------------------PNYNVMGVA 163 (260)
T ss_pred ceEEEEecCccccCC--------------------------------------------------------CcccchhhH
Confidence 689999986532110 113469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|+..+.+.+.. ..++++..+.||.|-.+...... .. ......... . .+ ...+...+|+|
T Consensus 164 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~~---~~~~~~~~~-~---~p-----~~r~~~pedva 227 (260)
T PRK06603 164 KAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG----DF---STMLKSHAA-T---AP-----LKRNTTQEDVG 227 (260)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC----Cc---HHHHHHHHh-c---CC-----cCCCCCHHHHH
Confidence 99999988766 46899999999998664321100 00 011111111 1 11 11245679999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++..... .-.+..+.+.++
T Consensus 228 ~~~~~L~s~~~~-~itG~~i~vdgG 251 (260)
T PRK06603 228 GAAVYLFSELSK-GVTGEIHYVDCG 251 (260)
T ss_pred HHHHHHhCcccc-cCcceEEEeCCc
Confidence 999998863222 112566666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=130.12 Aligned_cols=228 Identities=17% Similarity=0.134 Sum_probs=142.0
Q ss_pred hcCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+++|+|+|||| ++.||.+++++|+++|++ |.+..|.....+..+.+.+ +. ..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~~~~~~~~~~-------------~~---------~~ 57 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRFKDRITEFAA-------------EF---------GS 57 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe---EEEEccchHHHHHHHHHHH-------------hc---------CC
Confidence 467899999996 679999999999999955 4555443211112222111 11 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
..++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+.+++.+. .+
T Consensus 58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 3467899997664333333332334679999999987421 1356677899999999999887763 33
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++||.+..... .....|+.
T Consensus 138 ~g~Ii~iss~~~~~~~--------------------------------------------------------~~~~~Y~a 161 (260)
T PRK06997 138 DASLLTLSYLGAERVV--------------------------------------------------------PNYNTMGL 161 (260)
T ss_pred CceEEEEeccccccCC--------------------------------------------------------CCcchHHH
Confidence 4679999987532110 11346999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|+..+.+.+.. ..+++++.+.||.|-.+... .+.. .......... . .+ ...+...+|+
T Consensus 162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~---~p-----~~r~~~pedv 225 (260)
T PRK06997 162 AKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS---GIKD----FGKILDFVES-N---AP-----LRRNVTIEEV 225 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc---cccc----hhhHHHHHHh-c---Cc-----ccccCCHHHH
Confidence 999999988866 45899999999988664221 0000 0011111110 1 01 1125678999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+++..++..... .-.+.++.+.++
T Consensus 226 a~~~~~l~s~~~~-~itG~~i~vdgg 250 (260)
T PRK06997 226 GNVAAFLLSDLAS-GVTGEITHVDSG 250 (260)
T ss_pred HHHHHHHhCcccc-CcceeEEEEcCC
Confidence 9999998863222 122567777665
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=128.14 Aligned_cols=213 Identities=15% Similarity=0.076 Sum_probs=139.3
Q ss_pred EEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCC
Q 015874 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (399)
Q Consensus 16 lVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~ 95 (399)
+||||+|+||++++++|+++| .+|.++.|+.+.. +...+.+ . .+.+++++.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------~----------~~~~~~~~~~Dl~ 55 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRDRL---AAAARAL---------G----------GGAPVRTAALDIT 55 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------h----------cCCceEEEEccCC
Confidence 699999999999999999999 4568888864321 1111111 0 0256888999999
Q ss_pred CCCCCCCchhhHHHHh---cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 96 SEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 96 ~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
+++ .+..++ .++|++||+|+.... .+.++..+++|+.+..++.++... .+..++|++||.+.
T Consensus 56 ~~~-------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g~iv~~ss~~~ 127 (230)
T PRK07041 56 DEA-------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGGSLTFVSGFAA 127 (230)
T ss_pred CHH-------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCeEEEEECchhh
Confidence 643 333333 358999999997432 245777899999999999995544 35679999999876
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+... .+.+.|+.+|...+.+.+..
T Consensus 128 ~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 128 VRPS--------------------------------------------------------ASGVLQGAINAALEALARGL 151 (230)
T ss_pred cCCC--------------------------------------------------------CcchHHHHHHHHHHHHHHHH
Confidence 6531 12357999999999998876
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++.++|+.+-++...... .. ....+...... . ++ ...+...+|+|++++.++.. ...
T Consensus 152 a~e~~~irv~~i~pg~~~t~~~~~~~---~~--~~~~~~~~~~~-~---~~-----~~~~~~~~dva~~~~~l~~~-~~~ 216 (230)
T PRK07041 152 ALELAPVRVNTVSPGLVDTPLWSKLA---GD--AREAMFAAAAE-R---LP-----ARRVGQPEDVANAILFLAAN-GFT 216 (230)
T ss_pred HHHhhCceEEEEeecccccHHHHhhh---cc--chHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhcC-CCc
Confidence 23588999999987654321000 00 00011111111 1 11 11234679999999998863 222
Q ss_pred CCCCcEEEecCC
Q 015874 323 PSDANIYHVGSS 334 (399)
Q Consensus 323 ~~~~~~yni~~~ 334 (399)
.++.|++.++
T Consensus 217 --~G~~~~v~gg 226 (230)
T PRK07041 217 --TGSTVLVDGG 226 (230)
T ss_pred --CCcEEEeCCC
Confidence 2678998886
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-13 Score=130.23 Aligned_cols=229 Identities=16% Similarity=0.101 Sum_probs=142.2
Q ss_pred hhcCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..+.+|+++|||| ++.||.+++++|+++| .+|++..|+... ...+.+.+++ ..
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~-~~~~~~~~~~---------------------~~ 57 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRAL-RLTERIAKRL---------------------PE 57 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccch-hHHHHHHHhc---------------------CC
Confidence 3477899999999 8999999999999999 456777765321 1122222111 13
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-------~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
++.++.+|+++++......+...+.+.++|++||+||... + .+.+...+++|+.+...+++++.+. .+
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~ 137 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE 137 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence 5678899999765422222222223357999999999752 1 1345667899999999999887653 23
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++|+.+..+. .....|+.
T Consensus 138 ~g~Iv~is~~~~~~~---------------------------------------------------------~~~~~Y~a 160 (256)
T PRK07889 138 GGSIVGLDFDATVAW---------------------------------------------------------PAYDWMGV 160 (256)
T ss_pred CceEEEEeecccccC---------------------------------------------------------CccchhHH
Confidence 357888775421110 11245899
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
||+..+.+.+.. ..|+++..+.||.|-.+.....++. ......... . .+ ..+.+...+|+
T Consensus 161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~-~---~p----~~~~~~~p~ev 225 (256)
T PRK07889 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-------ELLEEGWDE-R---AP----LGWDVKDPTPV 225 (256)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-------HHHHHHHHh-c---Cc----cccccCCHHHH
Confidence 999999888765 4689999999999977543211110 001111111 0 00 01134678999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+.++.+.++
T Consensus 226 A~~v~~l~s~~~~-~~tG~~i~vdgg 250 (256)
T PRK07889 226 ARAVVALLSDWFP-ATTGEIVHVDGG 250 (256)
T ss_pred HHHHHHHhCcccc-cccceEEEEcCc
Confidence 9999998863222 112566666554
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.4e-14 Score=131.76 Aligned_cols=166 Identities=15% Similarity=0.123 Sum_probs=115.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||||+||++++++|+++| .+|.+++|+..... .+ ..+.++.+++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~~-----~~---------------------~~~~~~~~~~ 51 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPSL-----AA---------------------AAGERLAEVE 51 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchhh-----hh---------------------ccCCeEEEEE
Confidence 3689999999999999999999999 55678888754310 00 0124688899
Q ss_pred ccCCCCCCCCCchhh-HHHHh---cCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 92 GDISSEDLGLKDSNL-KEELW---NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 92 gDl~~~~~~~~~~~~-~~~~~---~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+|+++++......+. ....+ ..+|++||+|+.... .+.++..++.|+.+...+++.+.+. .+..+
T Consensus 52 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 131 (243)
T PRK07023 52 LDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131 (243)
T ss_pred eccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence 999975431110000 00111 258999999997532 2345777889999988887776543 24568
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||...+... .....|+.+|.
T Consensus 132 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 155 (243)
T PRK07023 132 ILHISSGAARNAY--------------------------------------------------------AGWSVYCATKA 155 (243)
T ss_pred EEEEeChhhcCCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998654421 12357999999
Q ss_pred HHHHHHHHh----hCCCcEEEEecCceecC
Q 015874 237 MGEMLMQQS----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 237 ~~E~~l~~~----~~~~~~~i~Rp~~V~G~ 262 (399)
..|.+++.+ ..++++.+++||.+-++
T Consensus 156 a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 156 ALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 999999876 24799999999988553
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=131.61 Aligned_cols=252 Identities=11% Similarity=0.054 Sum_probs=142.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+++|||| |+||+++++.|. +| .+|+++.|+.+.. +...+++ .. .+.++.+++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~~~ 55 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEENL---EAAAKTL---------RE---------AGFDVSTQE 55 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeEEEEE
Confidence 478999998 799999999996 78 5568888865332 1111111 00 124678899
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~ 170 (399)
+|+++++......+.. ..+.++|++||+||.......++..+++|+.++.++++++.+. ....++|++||........
T Consensus 56 ~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~ 134 (275)
T PRK06940 56 VDVSSRESVKALAATA-QTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPA 134 (275)
T ss_pred eecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcc
Confidence 9999754321111111 1124699999999986555678889999999999999988763 2234567777765432110
Q ss_pred Cccccc--cCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc-ccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 171 GLILEN--PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE-RAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 171 ~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
...+. .....+..+ +.. ++.. +.........|+.||++.+.+.+..
T Consensus 135 -~~~~~~~~~~~~~~~~------------------------~~~----~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~ 185 (275)
T PRK06940 135 -LTAEQERALATTPTEE------------------------LLS----LPFLQPDAIEDSLHAYQIAKRANALRVMAEAV 185 (275)
T ss_pred -cchhhhcccccccccc------------------------ccc----cccccccccCCccchhHHHHHHHHHHHHHHHH
Confidence 00000 000000000 000 0000 0000012357999999999888755
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++.+.||.|.++.... .+... . ......... . .+ ..-+...+|+|+++..++.....
T Consensus 186 e~~~~gIrvn~i~PG~v~T~~~~~--~~~~~-~--~~~~~~~~~-~---~p-----~~r~~~peeia~~~~fL~s~~~~- 250 (275)
T PRK06940 186 KWGERGARINSISPGIISTPLAQD--ELNGP-R--GDGYRNMFA-K---SP-----AGRPGTPDEIAALAEFLMGPRGS- 250 (275)
T ss_pred HHccCCeEEEEeccCcCcCccchh--hhcCC-c--hHHHHHHhh-h---CC-----cccCCCHHHHHHHHHHHcCcccC-
Confidence 468999999999997754211 00000 0 001111111 0 11 12356789999999988853222
Q ss_pred CCCCcEEEecCC
Q 015874 323 PSDANIYHVGSS 334 (399)
Q Consensus 323 ~~~~~~yni~~~ 334 (399)
--.+..+.+.++
T Consensus 251 ~itG~~i~vdgg 262 (275)
T PRK06940 251 FITGSDFLVDGG 262 (275)
T ss_pred cccCceEEEcCC
Confidence 112566777665
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.6e-14 Score=147.46 Aligned_cols=176 Identities=18% Similarity=0.111 Sum_probs=123.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+++++||||+|+||++++++|+++| ++|.+..|+.... +.+.+.+ +. .+.++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~ 366 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAAA---ERTAELI---------RA---------AGAVA 366 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeE
Confidence 34567899999999999999999999999 4568888875432 2211111 00 12467
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~ 156 (399)
.++.+|+++++......+........+|++||+||.... .+.++..+++|+.|+.++++++... ++ ..+
T Consensus 367 ~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 446 (582)
T PRK05855 367 HAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGH 446 (582)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 889999997543111111111222458999999998532 2467778999999999998876542 12 358
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||.+.+.... ....|+.+|+
T Consensus 447 iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y~~sKa 470 (582)
T PRK05855 447 IVNVASAAAYAPSR--------------------------------------------------------SLPAYATSKA 470 (582)
T ss_pred EEEECChhhccCCC--------------------------------------------------------CCcHHHHHHH
Confidence 99999998766321 1357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
+.+.+.+.. ..|+++++++||.|-.+.
T Consensus 471 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 471 AVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 998887755 458999999999987653
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=129.63 Aligned_cols=230 Identities=16% Similarity=0.137 Sum_probs=142.2
Q ss_pred cCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.||+++||||+ +.||.+++++|+++|++ |.+..|+.+.....+... ++ .+. ...+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~---v~~~~~~~~~~~~~~~~~-~~---------~~~---------~~~~ 61 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAE---LGITYLPDEKGRFEKKVR-EL---------TEP---------LNPS 61 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEEecCcccchHHHHHH-HH---------Hhc---------cCcc
Confidence 578999999986 79999999999999954 455555543221111111 11 111 1245
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-------~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~ 155 (399)
.++++|+++++......+...+.+.++|++||+||... + .+.++..+++|+.+...+++++.+. ....
T Consensus 62 ~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g 141 (258)
T PRK07370 62 LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG 141 (258)
T ss_pred eEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence 67899999765422222222223357999999999642 1 2456788999999999999887653 2336
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||....... .....|+.+|
T Consensus 142 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 165 (258)
T PRK07370 142 SIVTLTYLGGVRAI--------------------------------------------------------PNYNVMGVAK 165 (258)
T ss_pred eEEEEeccccccCC--------------------------------------------------------cccchhhHHH
Confidence 89999986432110 1135699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
++.+.+.+.. ..|+++..+.||.|-.+......+. ......... . . ....+...+|+++
T Consensus 166 aal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-------~~~~~~~~~-~---~-----p~~r~~~~~dva~ 229 (258)
T PRK07370 166 AALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-------LDMIHHVEE-K---A-----PLRRTVTQTEVGN 229 (258)
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-------hhhhhhhhh-c---C-----CcCcCCCHHHHHH
Confidence 9999998866 4589999999999976532111000 011111110 0 0 1123556799999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..... .-.+..+.+.++
T Consensus 230 ~~~fl~s~~~~-~~tG~~i~vdgg 252 (258)
T PRK07370 230 TAAFLLSDLAS-GITGQTIYVDAG 252 (258)
T ss_pred HHHHHhChhhc-cccCcEEEECCc
Confidence 99998863222 112556666554
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.4e-13 Score=122.52 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=133.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++++||||+|+||+++++.|+++| .+|.++.|+.... +++.. .+++++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~~~---~~~~~------------------------~~~~~~~ 50 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADG---WRVIATARDAAAL---AALQA------------------------LGAEALA 50 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHHHH---HHHHh------------------------ccceEEE
Confidence 3689999999999999999999999 4568888775332 12111 2356789
Q ss_pred ccCCCCCCCCCchhhHHHHh-cCccEEEEcccccC---------ccccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELW-NELDIMVNSAAITK---------FDERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~---------~~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
+|+++.+. .......+. .++|+|||+|+... ..+.++..++.|+.++.++++++.+. ....++++
T Consensus 51 ~D~~~~~~---v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~ 127 (222)
T PRK06953 51 LDVADPAS---VAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAV 127 (222)
T ss_pred ecCCCHHH---HHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEE
Confidence 99996432 111111122 25899999999752 12457788999999999999988763 12356888
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||.. .++... ......|+.+|...
T Consensus 128 isS~~~~~~~~~------------------------------------------------------~~~~~~Y~~sK~a~ 153 (222)
T PRK06953 128 LSSRMGSIGDAT------------------------------------------------------GTTGWLYRASKAAL 153 (222)
T ss_pred EcCccccccccc------------------------------------------------------CCCccccHHhHHHH
Confidence 88753 344211 01123599999999
Q ss_pred HHHHHHh---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 239 EMLMQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 239 E~~l~~~---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+++.+ ..+++++.++||.+..+... + ...+..++.+..++.+
T Consensus 154 ~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------------~----~~~~~~~~~~~~~~~~ 200 (222)
T PRK06953 154 NDALRAASLQARHATCIALHPGWVRTDMGG-----------------------------A----QAALDPAQSVAGMRRV 200 (222)
T ss_pred HHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------------C----CCCCCHHHHHHHHHHH
Confidence 9999876 34788999999988664320 0 1124567888888888
Q ss_pred HHhccCCCCCCcEEEecC
Q 015874 316 MVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~ 333 (399)
+....... .+..|...+
T Consensus 201 ~~~~~~~~-~~~~~~~~~ 217 (222)
T PRK06953 201 IAQATRRD-NGRFFQYDG 217 (222)
T ss_pred HHhcCccc-CceEEeeCC
Confidence 87543322 245555544
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.3e-13 Score=128.47 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=134.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
.+++||||+|+||++++++|+++|+ .|.++.|+... ..+.+.+++ ... .+.++.++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~---~V~~~~~~~~~--~~~~~~~~l---------~~~--------~~~~~~~~~~ 59 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY---RVVLHYHRSAA--AASTLAAEL---------NAR--------RPNSAVTCQA 59 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC---eEEEEcCCcHH--HHHHHHHHH---------Hhc--------cCCceEEEEc
Confidence 4799999999999999999999995 45666655321 112211111 000 1235667899
Q ss_pred cCCCCCCCCCc-hhhHH---HHhcCccEEEEcccccCc------c-c-----------cHHHHHHHhHHHHHHHHHHHHh
Q 015874 93 DISSEDLGLKD-SNLKE---ELWNELDIMVNSAAITKF------D-E-----------RYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 93 Dl~~~~~~~~~-~~~~~---~~~~~~D~Vih~Aa~~~~------~-~-----------~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
|+++++..... .+... +.+.++|+|||+||.... . . .+...+++|+.+...+++++.+
T Consensus 60 Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 60 DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred cCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99976431100 11111 123469999999996431 1 1 2567799999999999887654
Q ss_pred ccC---------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 015874 151 CVK---------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (399)
Q Consensus 151 ~~~---------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
... ...++.+||......
T Consensus 140 ~~~~~~~~~~~~~~~iv~~~s~~~~~~----------------------------------------------------- 166 (267)
T TIGR02685 140 RQAGTRAEQRSTNLSIVNLCDAMTDQP----------------------------------------------------- 166 (267)
T ss_pred HhhhcccccCCCCeEEEEehhhhccCC-----------------------------------------------------
Confidence 211 124666665532111
Q ss_pred cccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCC
Q 015874 222 AKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (399)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
......|+.+|+..+.+++.. ..|++++.++||.+..+...+ . ........ ..+ +
T Consensus 167 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~------~~~~~~~~-~~~-~---- 226 (267)
T TIGR02685 167 ---LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----F------EVQEDYRR-KVP-L---- 226 (267)
T ss_pred ---CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----h------hHHHHHHH-hCC-C----
Confidence 122357999999999999876 358999999999986543210 0 01111111 110 0
Q ss_pred ccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 297 KVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 297 ~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...+...+|++++++.++..... .-.+..+.+.++
T Consensus 227 --~~~~~~~~~va~~~~~l~~~~~~-~~~G~~~~v~gg 261 (267)
T TIGR02685 227 --GQREASAEQIADVVIFLVSPKAK-YITGTCIKVDGG 261 (267)
T ss_pred --CcCCCCHHHHHHHHHHHhCcccC-CcccceEEECCc
Confidence 01245779999999998863222 212567777665
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.53 E-value=4e-13 Score=125.31 Aligned_cols=205 Identities=10% Similarity=0.038 Sum_probs=130.1
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+||||+|+||.+++++|+++|+ +|.++.|+... ..+...+++ .+ .+.++.++.+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~~~~~l---------~~---------~~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF---EICVHYHSGRS--DAESVVSAI---------QA---------QGGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHHH---------HH---------cCCeEEEEEccC
Confidence 68999999999999999999994 55777765422 111111111 10 125688999999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHH-hc---cCCceEEEEecc
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAK-KC---VKLKVFVHVSTA 163 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~-~~---~~~~~~v~~SS~ 163 (399)
++++......+........+|++||+||.... .+.++..++.|+.++.++++++. .. .+..+||++||.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~ 137 (239)
T TIGR01831 58 ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASV 137 (239)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcch
Confidence 97543111111111223468999999986431 24677789999999999988753 21 244689999986
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
..+... .....|+.+|++.+.+.+
T Consensus 138 ~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~ 161 (239)
T TIGR01831 138 SGVMGN--------------------------------------------------------RGQVNYSAAKAGLIGATK 161 (239)
T ss_pred hhccCC--------------------------------------------------------CCCcchHHHHHHHHHHHH
Confidence 432211 112469999999888776
Q ss_pred Hh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 244 QS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 244 ~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
.. ..+++++.++||.+.++.....+ ........ . .+ ...+...+|+++++..++.
T Consensus 162 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~-~---~~-----~~~~~~~~~va~~~~~l~~ 221 (239)
T TIGR01831 162 ALAVELAKRKITVNCIAPGLIDTEMLAEVE----------HDLDEALK-T---VP-----MNRMGQPAEVASLAGFLMS 221 (239)
T ss_pred HHHHHHhHhCeEEEEEEEccCccccchhhh----------HHHHHHHh-c---CC-----CCCCCCHHHHHHHHHHHcC
Confidence 55 45899999999998775431110 01111111 0 11 1124466899999999886
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=127.55 Aligned_cols=215 Identities=9% Similarity=0.005 Sum_probs=137.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+++||||+|+||+++++.|+++|+ +|.++.|+.... .+.+.+ .++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--~~~~~~------------------------~~~~~~~ 52 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHYPA--IDGLRQ------------------------AGAQCIQ 52 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchhH--HHHHHH------------------------cCCEEEE
Confidence 47899999999999999999999994 567788875431 111111 2367889
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c--C--CceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--K--LKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~--~--~~~~v~ 159 (399)
+|+++++......+.....+.++|++||+||.... .+.++..+++|+.+...+.+.+.+. . + ..++|+
T Consensus 53 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~ 132 (236)
T PRK06483 53 ADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH 132 (236)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 99997553222222222223469999999996421 2457788999999999888777653 1 2 357999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 133 ~ss~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 156 (236)
T PRK06483 133 ITDYVVEKGS--------------------------------------------------------DKHIAYAASKAALD 156 (236)
T ss_pred EcchhhccCC--------------------------------------------------------CCCccHHHHHHHHH
Confidence 9886432110 11356999999999
Q ss_pred HHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 240 MLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 240 ~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
.+++.+ ..++++..++||.+...... .. ........ .. .+ .-+...+|+|+++..+
T Consensus 157 ~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~------~~-----~~~~~~~~-~~-~~-------~~~~~~~~va~~~~~l 216 (236)
T PRK06483 157 NMTLSFAAKLAPEVKVNSIAPALILFNEGD------DA-----AYRQKALA-KS-LL-------KIEPGEEEIIDLVDYL 216 (236)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceecCCCC------CH-----HHHHHHhc-cC-cc-------ccCCCHHHHHHHHHHH
Confidence 999876 23699999999988432110 00 01111111 10 01 0123568999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+. .... .+..+.+.++
T Consensus 217 ~~-~~~~--~G~~i~vdgg 232 (236)
T PRK06483 217 LT-SCYV--TGRSLPVDGG 232 (236)
T ss_pred hc-CCCc--CCcEEEeCcc
Confidence 85 2222 2567777665
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-12 Score=123.91 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=141.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|.||.++++.|+++| .+|.++.|+.++. ++..+++ .. ..+.++.+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~--------~~~~~~~~ 61 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADAL---EALAADL---------RA--------AHGVDVAV 61 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHH---------Hh--------hcCCceEE
Confidence 578999999999999999999999999 4568888875432 2222111 00 01246788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++. ..+.. +...++|++||+||.... .+.++..+++|+.+...+.+.+.+. .+..++|+
T Consensus 62 ~~~D~~~~~~---~~~~~-~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 137 (259)
T PRK06125 62 HALDLSSPEA---REQLA-AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVN 137 (259)
T ss_pred EEecCCCHHH---HHHHH-HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 9999996432 11111 233579999999986431 2467788999999999998876432 13457888
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...... ......|+.+|...+
T Consensus 138 iss~~~~~~--------------------------------------------------------~~~~~~y~ask~al~ 161 (259)
T PRK06125 138 VIGAAGENP--------------------------------------------------------DADYICGSAGNAALM 161 (259)
T ss_pred ecCccccCC--------------------------------------------------------CCCchHhHHHHHHHH
Confidence 887642110 011246899999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCC-CCccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+++.. ..+++++.++||.+-.+..... ..... .... ......... .. ....+...+|+|+++
T Consensus 162 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~-----~~~~~~~~~~va~~~ 231 (259)
T PRK06125 162 AFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGD-ESRWQELLA----GL-----PLGRPATPEEVADLV 231 (259)
T ss_pred HHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCC-HHHHHHHhc----cC-----CcCCCcCHHHHHHHH
Confidence 888765 4589999999999876531000 00000 0000 000000000 00 112356789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+.+.++
T Consensus 232 ~~l~~~~~~-~~~G~~i~vdgg 252 (259)
T PRK06125 232 AFLASPRSG-YTSGTVVTVDGG 252 (259)
T ss_pred HHHcCchhc-cccCceEEecCC
Confidence 888753221 112567777665
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=130.50 Aligned_cols=214 Identities=14% Similarity=0.130 Sum_probs=132.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++||||+|+||.++++.|+++| .+|.++.|+.+.. +...+++ .. .....+.++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~~---~~~~~~~---------~~--------~~~~~~~~~~~ 57 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADGL---AQTVADA---------RA--------LGGTVPEHRAL 57 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh--------cCCCcceEEEe
Confidence 579999999999999999999999 4567777765322 2221111 00 01123456789
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~v~~S 161 (399)
|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++++... ....++|++|
T Consensus 58 D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is 137 (272)
T PRK07832 58 DISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVS 137 (272)
T ss_pred eCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 9996543111112221223468999999986432 2456778999999999999987542 1246899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... +....|+.+|...+.+
T Consensus 138 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 161 (272)
T PRK07832 138 SAAGLVAL--------------------------------------------------------PWHAAYSASKFGLRGL 161 (272)
T ss_pred cccccCCC--------------------------------------------------------CCCcchHHHHHHHHHH
Confidence 87532211 1234699999988777
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.. ..++++++++||.+.++....... .............. .. .....+..+|+|++++.++
T Consensus 162 ~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~--------~~--~~~~~~~~~~vA~~~~~~~ 229 (272)
T PRK07832 162 SEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEI--AGVDREDPRVQKWV--------DR--FRGHAVTPEKAAEKILAGV 229 (272)
T ss_pred HHHHHHHhhhcCcEEEEEecCcccCcchhcccc--cccCcchhhHHHHH--------Hh--cccCCCCHHHHHHHHHHHH
Confidence 6644 468999999999998865321100 00000000000000 00 0123478899999999999
Q ss_pred H
Q 015874 317 V 317 (399)
Q Consensus 317 ~ 317 (399)
.
T Consensus 230 ~ 230 (272)
T PRK07832 230 E 230 (272)
T ss_pred h
Confidence 6
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.6e-13 Score=136.60 Aligned_cols=225 Identities=17% Similarity=0.127 Sum_probs=139.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++++++||||+|+||.++++.|.++| .+|.++.|+.... ......++ .+.
T Consensus 206 ~~~~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~~-~l~~~~~~-----------------------~~~ 258 (450)
T PRK08261 206 RPLAGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAGE-ALAAVANR-----------------------VGG 258 (450)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccHH-HHHHHHHH-----------------------cCC
Confidence 45678999999999999999999999999 4567777753321 12221111 133
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+.......++|+|||+||.... .+.++..+++|+.++.++.+++... ++..+|
T Consensus 259 ~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~i 338 (450)
T PRK08261 259 TALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRI 338 (450)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEE
Confidence 577899996542111111111122368999999997532 2567788999999999999998763 233689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 339 v~~SS~~~~~g~--------------------------------------------------------~~~~~Y~asKaa 362 (450)
T PRK08261 339 VGVSSISGIAGN--------------------------------------------------------RGQTNYAASKAG 362 (450)
T ss_pred EEECChhhcCCC--------------------------------------------------------CCChHHHHHHHH
Confidence 999987543211 112569999998
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..++++..+.||.+-.+....++. ....... ....+ ....-.+|+|+++
T Consensus 363 l~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~----------~~~~~~~-~~~~l-------~~~~~p~dva~~~ 424 (450)
T PRK08261 363 VIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF----------ATREAGR-RMNSL-------QQGGLPVDVAETI 424 (450)
T ss_pred HHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch----------hHHHHHh-hcCCc-------CCCCCHHHHHHHH
Confidence 87777655 458999999999875432211110 0011000 00011 1112346999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..++.... ..-.+..+.++++
T Consensus 425 ~~l~s~~~-~~itG~~i~v~g~ 445 (450)
T PRK08261 425 AWLASPAS-GGVTGNVVRVCGQ 445 (450)
T ss_pred HHHhChhh-cCCCCCEEEECCC
Confidence 98875322 2212677777664
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-12 Score=119.34 Aligned_cols=207 Identities=17% Similarity=0.268 Sum_probs=133.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||++++++|+++|+.+ .+....|..... ....++.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----------------------------~~~~~~~~~~~ 50 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----------------------------FQHDNVQWHAL 50 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----------------------------cccCceEEEEe
Confidence 689999999999999999999987553 455555543211 01257888999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-------------ccHHHHHHHhHHHHHHHHHHHHhc-c--CCce
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------------ERYDVAFGINTLGVIHLVNFAKKC-V--KLKV 156 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-------------~~~~~~~~~n~~~~~~ll~~a~~~-~--~~~~ 156 (399)
|+++.+. .+...+.++++|+|||+||..... +.+...+++|+.+...+++.+.+. . +..+
T Consensus 51 Dls~~~~----~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~ 126 (235)
T PRK09009 51 DVTDEAE----IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAK 126 (235)
T ss_pred cCCCHHH----HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCce
Confidence 9996431 111223456799999999976320 235567889999999998887663 1 2357
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
++++||.. +... +... .....|+.+|.
T Consensus 127 i~~iss~~--~~~~----~~~~-----------------------------------------------~~~~~Y~asK~ 153 (235)
T PRK09009 127 FAVISAKV--GSIS----DNRL-----------------------------------------------GGWYSYRASKA 153 (235)
T ss_pred EEEEeecc--cccc----cCCC-----------------------------------------------CCcchhhhhHH
Confidence 88888642 1100 0000 11247999999
Q ss_pred HHHHHHHHh----h---CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 237 MGEMLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 237 ~~E~~l~~~----~---~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
..+.+++.. . .++++..+.||.+-++.... . .. . . ....++..+|+|
T Consensus 154 a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~--------------~---~~-~---~-----~~~~~~~~~~~a 207 (235)
T PRK09009 154 ALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP--------------F---QQ-N---V-----PKGKLFTPEYVA 207 (235)
T ss_pred HHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc--------------h---hh-c---c-----ccCCCCCHHHHH
Confidence 999988765 1 47889999999887654310 0 00 0 0 112256789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
++++.++....... .+..+.+.+
T Consensus 208 ~~~~~l~~~~~~~~-~g~~~~~~g 230 (235)
T PRK09009 208 QCLLGIIANATPAQ-SGSFLAYDG 230 (235)
T ss_pred HHHHHHHHcCChhh-CCcEEeeCC
Confidence 99999997543221 144554444
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-13 Score=123.33 Aligned_cols=253 Identities=18% Similarity=0.192 Sum_probs=169.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.-+|||||+-|.+|..++..|... |.+ .|....-.+.. +.+ .+.--
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~--~VILSDI~KPp----~~V-------------------------~~~GP 90 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSE--CVILSDIVKPP----ANV-------------------------TDVGP 90 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCc--cEehhhccCCc----hhh-------------------------cccCC
Confidence 34468999999999999999877665 322 12221111100 000 01223
Q ss_pred EEeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~--~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
++..|+.|. .-++++. .++|.+||..+..+. ..+...+.++|+.|..|+++.+++. +.+ +..-||++
T Consensus 91 yIy~DILD~-------K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~-iFVPSTIG 161 (366)
T KOG2774|consen 91 YIYLDILDQ-------KSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLK-VFVPSTIG 161 (366)
T ss_pred chhhhhhcc-------ccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-Cee-Eeeccccc
Confidence 556787753 2222322 469999999887653 3555666889999999999999996 554 55689999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
++|..+. .++-+. . .--.+...||.||..+|.+-+.
T Consensus 162 AFGPtSP---RNPTPd---l--------------------------------------tIQRPRTIYGVSKVHAEL~GEy 197 (366)
T KOG2774|consen 162 AFGPTSP---RNPTPD---L--------------------------------------TIQRPRTIYGVSKVHAELLGEY 197 (366)
T ss_pred ccCCCCC---CCCCCC---e--------------------------------------eeecCceeechhHHHHHHHHHH
Confidence 9997542 111100 0 0014567899999999999887
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ .-|+..-.+|++.+..... |..|-.+ .....+-.+..+|+..+.. .++.+.++++++||-++++..+.+...+
T Consensus 198 ~~hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk~tCyl-rpdtrlpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 198 FNHRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGKHTCYL-RPDTRLPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred HHhhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCCccccc-CCCccCceeehHHHHHHHHHHHhCCHHH
Confidence 7 5688999999999888654 3333222 2233333455566666654 3567899999999999999999864433
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
- ..+.||+++ -..|-.|+++.+.+....
T Consensus 274 l-krr~ynvt~---~sftpee~~~~~~~~~p~ 301 (366)
T KOG2774|consen 274 L-KRRTYNVTG---FSFTPEEIADAIRRVMPG 301 (366)
T ss_pred h-hhheeeece---eccCHHHHHHHHHhhCCC
Confidence 2 278999998 568999999999888653
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.5e-13 Score=116.21 Aligned_cols=170 Identities=16% Similarity=0.165 Sum_probs=115.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++++||||+|+||.+++++|+++|.. .|.+..|+...........+.+ .. .+.++.++.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~~~~~~~---------~~---------~~~~~~~~~~ 60 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR--HLVLLSRSGPDAPGAAELLAEL---------EA---------LGAEVTVVAC 60 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC--eEEEEeCCCCCCccHHHHHHHH---------Hh---------cCCeEEEEEC
Confidence 47999999999999999999998852 4677777654432211111111 00 1346788999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
|+++++......+.....+..+|+|||+|+.... .+.++..++.|+.++.++++++.+. +.++++++||.+.
T Consensus 61 D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~ 139 (180)
T smart00822 61 DVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAG 139 (180)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHH
Confidence 9996432111111111113457999999996432 1456777999999999999999774 6788999888643
Q ss_pred -ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 -AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 -~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
++. .....|+.+|...+.+++.
T Consensus 140 ~~~~---------------------------------------------------------~~~~~y~~sk~~~~~~~~~ 162 (180)
T smart00822 140 VLGN---------------------------------------------------------PGQANYAAANAFLDALAAH 162 (180)
T ss_pred hcCC---------------------------------------------------------CCchhhHHHHHHHHHHHHH
Confidence 221 1124699999999999976
Q ss_pred h-hCCCcEEEEecCcee
Q 015874 245 S-KENLSLVIIRPTVVS 260 (399)
Q Consensus 245 ~-~~~~~~~i~Rp~~V~ 260 (399)
. ..+++++.+.||.+-
T Consensus 163 ~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 163 RRARGLPATSINWGAWA 179 (180)
T ss_pred HHhcCCceEEEeecccc
Confidence 6 678999999988754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.9e-13 Score=124.64 Aligned_cols=168 Identities=14% Similarity=0.128 Sum_probs=110.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||++++++|+++|+ +|.++.|...+. .+.+.+ ....+++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~~~--~~~~~~---------------------~~~~~~~~~~~ 55 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT---HVISISRTENKE--LTKLAE---------------------QYNSNLTFHSL 55 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCchHH--HHHHHh---------------------ccCCceEEEEe
Confidence 6899999999999999999999994 567888865221 111110 01357889999
Q ss_pred cCCCCCCCCCchhhHHHHhc--Cc--cEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 93 DISSEDLGLKDSNLKEELWN--EL--DIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~--D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
|+++++...+..+.....+. +. +++||+||.... .+.+...+++|+.+...+++.+.+. +..++
T Consensus 56 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 135 (251)
T PRK06924 56 DLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKR 135 (251)
T ss_pred cCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCce
Confidence 99965431111111111111 11 289999987532 2446677888999887777766542 12458
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||....... .....|+.+|.
T Consensus 136 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKa 159 (251)
T PRK06924 136 VINISSGAAKNPY--------------------------------------------------------FGWSAYCSSKA 159 (251)
T ss_pred EEEecchhhcCCC--------------------------------------------------------CCcHHHhHHHH
Confidence 9999997543211 22357999999
Q ss_pred HHHHHHHHh--h-----CCCcEEEEecCceecC
Q 015874 237 MGEMLMQQS--K-----ENLSLVIIRPTVVSGT 262 (399)
Q Consensus 237 ~~E~~l~~~--~-----~~~~~~i~Rp~~V~G~ 262 (399)
..+.+++.+ + .++++..++||.+-.+
T Consensus 160 a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 160 GLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 999998765 1 3689999999987654
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-12 Score=117.48 Aligned_cols=184 Identities=18% Similarity=0.282 Sum_probs=126.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++||||+|+||++++++|.++ + +|.+..|+.. .+++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~--------------------------------------~~~~ 38 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG--------------------------------------DVQV 38 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC--------------------------------------ceEe
Confidence 58999999999999999999886 3 4577766531 2578
Q ss_pred cCCCCCCCCCchhhHHHH---hcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~---~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
|+++++ ....+ ..++|++||+||.... .+.+...+++|+.++.++++++.+. .+...|+++|
T Consensus 39 D~~~~~-------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 39 DITDPA-------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred cCCChH-------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 999643 22232 3479999999996432 2456777899999999999988763 2446788888
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....... .....|+.+|...+.+
T Consensus 112 s~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 112 GILSDEPI--------------------------------------------------------PGGASAATVNGALEGF 135 (199)
T ss_pred ccccCCCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 76532210 1235799999999988
Q ss_pred HHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 242 MQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 242 l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
.+.. ..++++..+.||.+-.+.. . .. . .+++ ...+..+|+|++++.++.
T Consensus 136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~-------~--------~~-----~--~~~~-----~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 136 VKAAALELPRGIRINVVSPTVLTESLE-------K--------YG-----P--FFPG-----FEPVPAARVALAYVRSVE 188 (199)
T ss_pred HHHHHHHccCCeEEEEEcCCcccCchh-------h--------hh-----h--cCCC-----CCCCCHHHHHHHHHHHhc
Confidence 8765 3579999999987743211 0 00 0 1111 235789999999998886
Q ss_pred hccCCCCCCcEEEec
Q 015874 318 AHAKQPSDANIYHVG 332 (399)
Q Consensus 318 ~~~~~~~~~~~yni~ 332 (399)
... .+++|+++
T Consensus 189 ~~~----~g~~~~~~ 199 (199)
T PRK07578 189 GAQ----TGEVYKVG 199 (199)
T ss_pred cce----eeEEeccC
Confidence 321 25667653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.6e-13 Score=137.45 Aligned_cols=171 Identities=15% Similarity=0.156 Sum_probs=120.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.++|+++||||+++||.+++++|+++| .+|.+..|+.+.. +...+++ +.++.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~~ 55 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVERA---RERADSL---------------------GPDHHA 55 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCceeE
Confidence 468999999999999999999999999 4567777865432 1111111 246678
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCC-ce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC---VKL-KV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~-~~ 156 (399)
+.+|+++++......+...+.+.++|++||+||... + .+.++..+++|+.++..+++++.+. .+. .+
T Consensus 56 ~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~ 135 (520)
T PRK06484 56 LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAA 135 (520)
T ss_pred EEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCe
Confidence 999999754322122222223356999999998631 1 2457788999999999999888763 122 38
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||....... .....|+.+|+
T Consensus 136 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 159 (520)
T PRK06484 136 IVNVASGAGLVAL--------------------------------------------------------PKRTAYSASKA 159 (520)
T ss_pred EEEECCcccCCCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999987543321 11357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
..+.+.+.. ..+++++.+.||.|-.+.
T Consensus 160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 999988765 457999999999886654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-13 Score=126.59 Aligned_cols=170 Identities=14% Similarity=0.018 Sum_probs=112.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|.||++++++|+++| ++|.+..|+.+.. ++..+++ .+ ..++.++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~----------~~~~~~~~~ 55 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEENL---EKALKEL---------KE----------YGEVYAVKA 55 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHH---------Hh----------cCCceEEEc
Confidence 689999999999999999999999 4567888875432 2222111 00 135778999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHh-c---cCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKK-C---VKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~~~~~ll~~a~~-~---~~~~~~v~ 159 (399)
|+++++......+...+.+.++|++||+||... . .+.+...+.+|+.+...+.+.+.. + ++..+||+
T Consensus 56 Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~ 135 (259)
T PRK08340 56 DLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY 135 (259)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999754311111111122357999999999642 1 123455567787776666554322 1 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 136 isS~~~~~~~--------------------------------------------------------~~~~~y~~sKaa~~ 159 (259)
T PRK08340 136 LSSVSVKEPM--------------------------------------------------------PPLVLADVTRAGLV 159 (259)
T ss_pred EeCcccCCCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 9998654311 11346999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCC
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
.+.+.. ..|+++..+.||.+-.+.
T Consensus 160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~ 188 (259)
T PRK08340 160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPG 188 (259)
T ss_pred HHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence 998866 457999999999886643
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-12 Score=128.47 Aligned_cols=174 Identities=17% Similarity=0.183 Sum_probs=118.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.|++++||||||+||++++++|+++|+ +|.+..|+.++. +.+.+++ .... ...++..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~---~Vil~~R~~~~l---~~~~~~l---------~~~~-------~~~~~~~~ 109 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL---NLVLVARNPDKL---KDVSDSI---------QSKY-------SKTQIKTV 109 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC---CEEEEECCHHHH---HHHHHHH---------HHHC-------CCcEEEEE
Confidence 579999999999999999999999995 457888876432 2222221 1110 01356778
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.+|+++. . .+..+...+... ++|++||+||... + .+.++..+++|+.++..+++++.+. ++..+
T Consensus 110 ~~Dl~~~-~-~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~ 187 (320)
T PLN02780 110 VVDFSGD-I-DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGA 187 (320)
T ss_pred EEECCCC-c-HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcE
Confidence 8999841 0 001122223333 3669999999752 1 1345678999999999999987652 25578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||...+.... .+....|+.||+
T Consensus 188 IV~iSS~a~~~~~~------------------------------------------------------~p~~~~Y~aSKa 213 (320)
T PLN02780 188 IINIGSGAAIVIPS------------------------------------------------------DPLYAVYAATKA 213 (320)
T ss_pred EEEEechhhccCCC------------------------------------------------------CccchHHHHHHH
Confidence 99999986542100 011357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
..+.+.+.. ..|++++++.||.|-.+
T Consensus 214 al~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 214 YIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred HHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 999988766 45899999999998664
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.7e-13 Score=122.88 Aligned_cols=199 Identities=11% Similarity=-0.001 Sum_probs=131.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++||||+|+||+++++.|+++| ++|.+..|+.++. +...++ .++.++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~~~~---~~~~~~-----------------------~~~~~~~~ 51 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARRDDL---EVAAKE-----------------------LDVDAIVC 51 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHh-----------------------ccCcEEec
Confidence 479999999999999999999999 4567777765332 111110 13567889
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccC---------c---cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK---------F---DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---------~---~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
|+++++. ..+....+.+++|++||+|+... . .+.++..+++|+.+...+++++.+. ....++|+
T Consensus 52 D~~~~~~---v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~ 128 (223)
T PRK05884 52 DNTDPAS---LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIIS 128 (223)
T ss_pred CCCCHHH---HHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 9996432 11122122236899999997421 1 2457788999999999999988763 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.. . .....|+.+|+..+
T Consensus 129 isS~~--~----------------------------------------------------------~~~~~Y~asKaal~ 148 (223)
T PRK05884 129 VVPEN--P----------------------------------------------------------PAGSAEAAIKAALS 148 (223)
T ss_pred EecCC--C----------------------------------------------------------CCccccHHHHHHHH
Confidence 98864 1 01246999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..++++..+.||.+..+.. ... . . . +....+|+++++..
T Consensus 149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------------~~~-~-~---~--------p~~~~~~ia~~~~~ 198 (223)
T PRK05884 149 NWTAGQAAVFGTRGITINAVACGRSVQPGY-----------------DGL-S-R---T--------PPPVAAEIARLALF 198 (223)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCccCchhh-----------------hhc-c-C---C--------CCCCHHHHHHHHHH
Confidence 998766 4589999999998754211 000 0 0 0 11267899999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+.++.+.++
T Consensus 199 l~s~~~~-~v~G~~i~vdgg 217 (223)
T PRK05884 199 LTTPAAR-HITGQTLHVSHG 217 (223)
T ss_pred HcCchhh-ccCCcEEEeCCC
Confidence 8763222 112566666554
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-12 Score=126.55 Aligned_cols=181 Identities=14% Similarity=0.042 Sum_probs=119.7
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-------cHHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-------SAALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
+..++||+++||||++.||.+++++|++.| .+|.+..|+.... ...+...+.+ . .
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l---------~-~----- 64 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAELV---------T-A----- 64 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHHHH---------H-h-----
Confidence 345789999999999999999999999999 4567788874321 1122222111 0 0
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcc-ccc------C-c----cccHHHHHHHhHHHHHHHHHH
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA-AIT------K-F----DERYDVAFGINTLGVIHLVNF 147 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~A-a~~------~-~----~~~~~~~~~~n~~~~~~ll~~ 147 (399)
.+.++.++++|+++++......+...+.+.++|++||+| +.. . . .+.+...+++|+.+...++++
T Consensus 65 ---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 141 (305)
T PRK08303 65 ---AGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHF 141 (305)
T ss_pred ---cCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHH
Confidence 124577899999976542222222223345799999999 632 1 1 134566788999999998887
Q ss_pred HHhc---cCCceEEEEecceee-cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 148 AKKC---VKLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 148 a~~~---~~~~~~v~~SS~~v~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
+.+. .+..+||++||.... ....
T Consensus 142 ~lp~m~~~~~g~IV~isS~~~~~~~~~----------------------------------------------------- 168 (305)
T PRK08303 142 ALPLLIRRPGGLVVEITDGTAEYNATH----------------------------------------------------- 168 (305)
T ss_pred HHHHhhhCCCcEEEEECCccccccCcC-----------------------------------------------------
Confidence 7653 123589999885421 1100
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
......|+.+|.....+.+.. ..|+++..+.||.|-.+
T Consensus 169 -~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 169 -YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 011246999999999988755 45899999999988554
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.7e-12 Score=119.76 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=138.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
....|+.||||||.+.+|+.++.+++++| .++.+-...++.. +..+.+++ . .+
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~~etv~~~~~----------------------~-g~ 87 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGNEETVKEIRK----------------------I-GE 87 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccchHHHHHHHHh----------------------c-Cc
Confidence 45678999999999999999999999999 4455555554432 22222221 0 26
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+..+.+|+++.+-.-...+.+++-.+++|++||+||.+.. ++..+.++++|+.+.....++.... .+-.+
T Consensus 88 ~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GH 167 (300)
T KOG1201|consen 88 AKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGH 167 (300)
T ss_pred eeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCce
Confidence 8899999998543222233333444579999999998753 3567788999999999888876552 35678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|.++|+.-+-... .-..|+.||+
T Consensus 168 IV~IaS~aG~~g~~--------------------------------------------------------gl~~YcaSK~ 191 (300)
T KOG1201|consen 168 IVTIASVAGLFGPA--------------------------------------------------------GLADYCASKF 191 (300)
T ss_pred EEEehhhhcccCCc--------------------------------------------------------cchhhhhhHH
Confidence 99998875433221 1246999999
Q ss_pred HHHHHHHHh--------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 237 MGEMLMQQS--------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 237 ~~E~~l~~~--------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
++.-+.+.. ..|++++.+-|+.+-. + +.. + ...-....+.+..+.|
T Consensus 192 a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T-g------mf~--------------~-----~~~~~~l~P~L~p~~v 245 (300)
T KOG1201|consen 192 AAVGFHESLSMELRALGKDGIKTTLVCPYFINT-G------MFD--------------G-----ATPFPTLAPLLEPEYV 245 (300)
T ss_pred HHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc-c------ccC--------------C-----CCCCccccCCCCHHHH
Confidence 987776654 3568888888887642 1 111 1 0111245677888999
Q ss_pred HHHHHHHHHh
Q 015874 309 VNAMIVAMVA 318 (399)
Q Consensus 309 a~~i~~~~~~ 318 (399)
|+.++.++..
T Consensus 246 a~~Iv~ai~~ 255 (300)
T KOG1201|consen 246 AKRIVEAILT 255 (300)
T ss_pred HHHHHHHHHc
Confidence 9999999974
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=120.88 Aligned_cols=166 Identities=16% Similarity=0.147 Sum_probs=114.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|+||||+|+||+++++.|+++| ++|.++.|+......... ..++.++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~ 52 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQDTALQA--------------------------LPGVHIEKL 52 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcchHHHHh--------------------------ccccceEEc
Confidence 689999999999999999999999 567888888654322111 135677889
Q ss_pred cCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc-c-CCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC-V-KLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~-~-~~~~~v~~ 160 (399)
|+++++. ..+..+.+. .++|+|||+||.... .+.+...+.+|+.++..+++++.+. . ....++++
T Consensus 53 D~~d~~~---~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ 129 (225)
T PRK08177 53 DMNDPAS---LDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFM 129 (225)
T ss_pred CCCCHHH---HHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEE
Confidence 9996542 112222222 269999999987532 1345667888999999999988653 1 23567777
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.. +... .. +......|+.+|.+.+.
T Consensus 130 ss~~--g~~~----~~-----------------------------------------------~~~~~~~Y~~sK~a~~~ 156 (225)
T PRK08177 130 SSQL--GSVE----LP-----------------------------------------------DGGEMPLYKASKAALNS 156 (225)
T ss_pred ccCc--cccc----cC-----------------------------------------------CCCCccchHHHHHHHHH
Confidence 7652 2111 00 00112369999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCC
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
+++.+ ..++++..++||.+-.+.
T Consensus 157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 157 MTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 99866 357899999999886643
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-12 Score=126.96 Aligned_cols=132 Identities=17% Similarity=0.126 Sum_probs=89.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+++++||||++.||.+++++|+++| ++ |.+.+|+.++. +...+++ . ....++.++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~---V~l~~r~~~~~---~~~~~~l-------------~-----~~~~~~~~~ 58 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWH---VIMACRDFLKA---EQAAKSL-------------G-----MPKDSYTIM 58 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCE---EEEEeCCHHHH---HHHHHHh-------------c-----CCCCeEEEE
Confidence 6799999999999999999999999 54 47777765432 1111111 0 012467888
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-c-C---CceE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V-K---LKVF 157 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~-~---~~~~ 157 (399)
.+|+++.+......+.......++|++||+||.... .+.++..+++|+.+...+++++.+. . . ..+|
T Consensus 59 ~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~I 138 (314)
T TIGR01289 59 HLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRL 138 (314)
T ss_pred EcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeE
Confidence 999997543221122221223569999999996421 1456778999999999998876552 1 1 3689
Q ss_pred EEEecceeec
Q 015874 158 VHVSTAYVAG 167 (399)
Q Consensus 158 v~~SS~~v~~ 167 (399)
|++||...+.
T Consensus 139 V~vsS~~~~~ 148 (314)
T TIGR01289 139 IIVGSITGNT 148 (314)
T ss_pred EEEecCcccc
Confidence 9999987654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.5e-12 Score=125.64 Aligned_cols=107 Identities=17% Similarity=0.294 Sum_probs=79.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+|+||||+|+||++++++|+++| .+|.++.|+.++.. +...+ ....+..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~~l~--~~~~~----------------------~~~~v~~ 228 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSDKIT--LEING----------------------EDLPVKT 228 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHH--HHHhh----------------------cCCCeEE
Confidence 578999999999999999999999999 55677777653211 00000 0124667
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
+.+|+++ .+...+.++++|++||+||.... .+.++..+++|+.++.++++++.+
T Consensus 229 v~~Dvsd-------~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 229 LHWQVGQ-------EAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred EEeeCCC-------HHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899994 44455667899999999987532 245677899999999999998765
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=119.30 Aligned_cols=197 Identities=16% Similarity=0.107 Sum_probs=127.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++||||++.||.+++++|. +| .+|.+..|+.+.. +...+++ .+ ....++.++.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g---~~Vil~~r~~~~~---~~~~~~l---------~~--------~~~~~~~~~~~ 56 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HG---EDVVLAARRPEAA---QGLASDL---------RQ--------RGATSVHVLSF 56 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CC---CEEEEEeCCHHHH---HHHHHHH---------Hh--------ccCCceEEEEc
Confidence 689999999999999999998 48 5567888875433 2222221 00 01135778999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-------ccHHHHHHHhHHHHHHHHHHHHh-c--c-CCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-------ERYDVAFGINTLGVIHLVNFAKK-C--V-KLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-------~~~~~~~~~n~~~~~~ll~~a~~-~--~-~~~~~v~~S 161 (399)
|+++++......+...+...++|++||+||..... +...+...+|+.+...+++.+.+ + + ...++|++|
T Consensus 57 Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 57 DAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99986653322333323345799999999975321 22345567788888777665533 1 1 236899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|....-.. .....|+.+|...+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~~ 160 (246)
T PRK05599 137 SIAGWRAR--------------------------------------------------------RANYVYGSTKAGLDAF 160 (246)
T ss_pred ccccccCC--------------------------------------------------------cCCcchhhHHHHHHHH
Confidence 87533211 1134699999999888
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.. ..+++++.+.||.|.++... . .. +.. . ....+|+|++++.++
T Consensus 161 ~~~la~el~~~~I~v~~v~PG~v~T~~~~-------~--------------~~---~~~----~-~~~pe~~a~~~~~~~ 211 (246)
T PRK05599 161 CQGLADSLHGSHVRLIIARPGFVIGSMTT-------G--------------MK---PAP----M-SVYPRDVAAAVVSAI 211 (246)
T ss_pred HHHHHHHhcCCCceEEEecCCcccchhhc-------C--------------CC---CCC----C-CCCHHHHHHHHHHHH
Confidence 8765 45799999999988764320 0 00 000 0 146789999999999
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
..
T Consensus 212 ~~ 213 (246)
T PRK05599 212 TS 213 (246)
T ss_pred hc
Confidence 74
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.5e-12 Score=118.23 Aligned_cols=170 Identities=12% Similarity=0.062 Sum_probs=114.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++||||++.||.+++++|+++| .+|.+..|+.+.. +...+++ .+ .+.++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~~l---~~~~~~i---------~~---------~~~~~~~ 58 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQSAL---KDTYEQC---------SA---------LTDNVYS 58 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHH---------Hh---------cCCCeEE
Confidence 578999999999999999999999999 4567778865432 2211111 00 1245677
Q ss_pred EeccCCCCCCCCCchhhHHHHhc-CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---c-CCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---V-KLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~-~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~-~~~~ 156 (399)
+.+|+++++......+...+.+. ++|++||+||.... .+.+...+++|+.+...+.+.+.+. + +...
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~ 138 (227)
T PRK08862 59 FQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGV 138 (227)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCce
Confidence 88999975532211222222335 79999999974321 1345556778888887777665432 1 2358
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||...+. ....|+.+|.
T Consensus 139 Iv~isS~~~~~-----------------------------------------------------------~~~~Y~asKa 159 (227)
T PRK08862 139 IVNVISHDDHQ-----------------------------------------------------------DLTGVESSNA 159 (227)
T ss_pred EEEEecCCCCC-----------------------------------------------------------CcchhHHHHH
Confidence 99999853211 1246999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
..+.+.+.. ..++++..+.||.+-..
T Consensus 160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 999888765 45899999999988775
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.4e-12 Score=124.19 Aligned_cols=191 Identities=22% Similarity=0.199 Sum_probs=135.0
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
...+.+++++|||||..||.+++++|..+| ..|+..+|+..+.+. .+.+.+ +....
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~--------------------~~~~~ 86 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK--------------------GKANQ 86 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh--------------------cCCCC
Confidence 345778999999999999999999999999 677999999754322 222221 23457
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-----ccHHHHHHHhHHHHHHHHHHHHhc-c--CCceE
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKC-V--KLKVF 157 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-----~~~~~~~~~n~~~~~~ll~~a~~~-~--~~~~~ 157 (399)
++.++++|+++.+...+..+...+.....|++||+||.+..+ +..+..+.+|..|...|.+++... + ...|+
T Consensus 87 ~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RI 166 (314)
T KOG1208|consen 87 KIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRI 166 (314)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCE
Confidence 889999999987765555555544456789999999987542 457888999999999998887653 1 23799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||..- +. .+.-..++... .........|+.||.+
T Consensus 167 V~vsS~~~-~~---~~~~~~l~~~~---------------------------------------~~~~~~~~~Y~~SKla 203 (314)
T KOG1208|consen 167 VNVSSILG-GG---KIDLKDLSGEK---------------------------------------AKLYSSDAAYALSKLA 203 (314)
T ss_pred EEEcCccc-cC---ccchhhccchh---------------------------------------ccCccchhHHHHhHHH
Confidence 99999764 11 01111110000 0001122259999999
Q ss_pred HHHHHHHh----hCCCcEEEEecCceecCC
Q 015874 238 GEMLMQQS----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 238 ~E~~l~~~----~~~~~~~i~Rp~~V~G~~ 263 (399)
......+. ..|+.+..+.||.|.+..
T Consensus 204 ~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 204 NVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred HHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 98888766 348999999999998863
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.9e-11 Score=113.31 Aligned_cols=107 Identities=14% Similarity=0.191 Sum_probs=79.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++++++||||+|+||++++++|+++| .+|.+..|+.... .+. .. ....
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~--~~~-~~-----------------------~~~~ 60 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINN--SES-ND-----------------------ESPN 60 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhh--hhh-hc-----------------------cCCC
Confidence 45778999999999999999999999999 4567777765211 100 00 0112
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
.++.+|+++ .+.....+.++|++||+||.... .+.+...+++|+.++.++++++.+
T Consensus 61 ~~~~~D~~~-------~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGK-------EESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCC-------HHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567899994 44444667789999999997432 356788899999999999998765
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.7e-12 Score=110.87 Aligned_cols=132 Identities=22% Similarity=0.264 Sum_probs=93.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|.||.++++.|+++|. ..|.+..|+ ......+.+.+++ .. ...++.++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~-~~~~~~~~l~~~l---------~~---------~~~~~~~~~~ 59 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS-EDSEGAQELIQEL---------KA---------PGAKITFIEC 59 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS-CHHHHHHHHHHHH---------HH---------TTSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec-ccccccccccccc---------cc---------cccccccccc
Confidence 6899999999999999999999964 457777787 1111222222111 10 1378899999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
|+++++......+........+|++||+||.... .+.++..++.|+.+...+.+++.. ++..++|++||...
T Consensus 60 D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 60 DLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAG 138 (167)
T ss_dssp ETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhh
Confidence 9997543222222222223479999999998652 256778899999999999999988 57889999998754
Q ss_pred e
Q 015874 166 A 166 (399)
Q Consensus 166 ~ 166 (399)
.
T Consensus 139 ~ 139 (167)
T PF00106_consen 139 V 139 (167)
T ss_dssp T
T ss_pred c
Confidence 3
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=118.62 Aligned_cols=179 Identities=20% Similarity=0.197 Sum_probs=129.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+.||+++||||+..||+++++.|.+.| .+|+...|+.+...... .+.. ......+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~~~~~~~~~~-------------------~~~~~~~ 61 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERLEETAQELGG-------------------LGYTGGK 61 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------------cCCCCCe
Confidence 35789999999999999999999999999 66788888876542221 1110 0111467
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH-hcCccEEEEcccccCc--------cccHHHHHHHhHH-HHHHHHHHHHhc---cC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKF--------DERYDVAFGINTL-GVIHLVNFAKKC---VK 153 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~-~~~~ll~~a~~~---~~ 153 (399)
+..+.+|+++.+...+..+...+. +.++|++||+||.... .+.++..+++|+. +...+.+++..+ .+
T Consensus 62 ~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~ 141 (270)
T KOG0725|consen 62 VLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK 141 (270)
T ss_pred eEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC
Confidence 889999999755433333333333 4679999999997642 2678889999999 578888877764 13
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
...++++||..-+.... ..+..|+.
T Consensus 142 gg~I~~~ss~~~~~~~~-------------------------------------------------------~~~~~Y~~ 166 (270)
T KOG0725|consen 142 GGSIVNISSVAGVGPGP-------------------------------------------------------GSGVAYGV 166 (270)
T ss_pred CceEEEEeccccccCCC-------------------------------------------------------CCcccchh
Confidence 45678888775443211 11157999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
+|...+++.+.. ..|+++..+-||.|..+.
T Consensus 167 sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 167 SKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 999999999866 678999999999999876
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.2e-11 Score=115.19 Aligned_cols=168 Identities=16% Similarity=0.157 Sum_probs=112.5
Q ss_pred EEEEecCcchhHHHHHHHHHH----hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 14 TILVSGVTGFVAKVFIEKILR----VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~----~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.|+||||+|+||.+++++|++ .| .+|.+..|+.+.. +...+++ ... ..+.++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~~---~~~~~~l---------~~~-------~~~~~v~~ 59 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEAL---RQLKAEI---------GAE-------RSGLRVVR 59 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHHH---HHHHHHH---------Hhc-------CCCceEEE
Confidence 689999999999999999987 68 5568888875432 2222211 000 01246888
Q ss_pred EeccCCCCCCCCCchhhHHHHhc-------CccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN-------ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
+.+|+++++.. .+....+.+ +.|++||+||.... .+.++..+++|+.++..+.+.+.+.
T Consensus 60 ~~~Dl~~~~~v---~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l 136 (256)
T TIGR01500 60 VSLDLGAEAGL---EQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAF 136 (256)
T ss_pred EEeccCCHHHH---HHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 99999965421 111212211 12699999996421 1345678999999999888877653
Q ss_pred c---C-CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 152 V---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 152 ~---~-~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
. + ..++|++||.+.+... ..
T Consensus 137 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 160 (256)
T TIGR01500 137 KDSPGLNRTVVNISSLCAIQPF--------------------------------------------------------KG 160 (256)
T ss_pred hhcCCCCCEEEEECCHHhCCCC--------------------------------------------------------CC
Confidence 1 1 2579999997543211 11
Q ss_pred CchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
...|+.+|...+.+.+.. ..+++++.+.||.|-.+
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 346999999999998865 35799999999988654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.9e-11 Score=119.20 Aligned_cols=127 Identities=16% Similarity=0.122 Sum_probs=83.7
Q ss_pred EEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 16 LVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 16 lVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
+||||++.||.+++++|+++| ++ |++.+|+.+.. +...+++ +. ...++.++.+|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~---V~~~~r~~~~~---~~~~~~l-------------~~-----~~~~~~~~~~Dl 56 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH---VVMACRDFLKA---ERAAKSA-------------GM-----PKDSYTVMHLDL 56 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE---EEEEeCCHHHH---HHHHHHh-------------cC-----CCCeEEEEEecC
Confidence 699999999999999999999 54 47777765332 1111111 00 124678889999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC--CceEEEEe
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK--LKVFVHVS 161 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~--~~~~v~~S 161 (399)
++++......+.......++|++||+||.... .+.++..+++|+.++..+++++.+. .+ ..++|++|
T Consensus 57 ~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vs 136 (308)
T PLN00015 57 ASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVG 136 (308)
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 96543211111111112468999999997421 2456788999999999998776552 12 36899999
Q ss_pred cceee
Q 015874 162 TAYVA 166 (399)
Q Consensus 162 S~~v~ 166 (399)
|...+
T Consensus 137 S~~~~ 141 (308)
T PLN00015 137 SITGN 141 (308)
T ss_pred ccccc
Confidence 98653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.2e-11 Score=110.16 Aligned_cols=173 Identities=21% Similarity=0.274 Sum_probs=117.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc-CceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~i~ 88 (399)
+.+|+|+||||++.||.++++.|++.| ..|++..|+.... ..+...+.. . ... ..+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~-~~~~~~~~~-------------~-----~~~~~~~~ 60 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEE-AAEALAAAI-------------K-----EAGGGRAA 60 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchh-hHHHHHHHH-------------H-----hcCCCcEE
Confidence 578999999999999999999999999 4557777765532 111111110 0 001 3677
Q ss_pred EEeccCCC-CCCCCCchhhHHHHhcCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 89 FVPGDISS-EDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~-~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
+...|+++ .+......+.......++|++||+||... . .+.++..+++|+.+...+.+++.+....+++|.
T Consensus 61 ~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 61 AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 88899996 33222222222233455999999999753 1 256788899999999999885554311228999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.... .... . ...|+.||++.+
T Consensus 141 isS~~~~-~~~~------------------------------------------------------~-~~~Y~~sK~al~ 164 (251)
T COG1028 141 ISSVAGL-GGPP------------------------------------------------------G-QAAYAASKAALI 164 (251)
T ss_pred ECCchhc-CCCC------------------------------------------------------C-cchHHHHHHHHH
Confidence 9998654 3211 0 257999999998
Q ss_pred HHHHHh-----hCCCcEEEEecCcee
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVS 260 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~ 260 (399)
.+.+.. ..|+++..+.||.+-
T Consensus 165 ~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 165 GLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 888765 458999999999554
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.8e-11 Score=114.59 Aligned_cols=241 Identities=12% Similarity=0.077 Sum_probs=139.6
Q ss_pred cCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
++||+++|||| +..||.++++.|.++|. +|.+ +|.....+. +.+.+.+ ..++.+...- ........
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~-~~~~~~l~~---~~~~~~~-~~~~~~~~~~----~~~~~~~~ 74 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV-GTWVPALNI---FETSLRR-GKFDESRKLP----DGSLMEIT 74 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE-EeCcchhhH---HHHhhhc-cccchhhhcc----cccccCcC
Confidence 78999999999 79999999999999994 4555 665543322 2111100 0000000000 00001224
Q ss_pred EEEeccC--CCCCCCC---------------CchhhHH---HHhcCccEEEEcccccC-----c----cccHHHHHHHhH
Q 015874 88 TFVPGDI--SSEDLGL---------------KDSNLKE---ELWNELDIMVNSAAITK-----F----DERYDVAFGINT 138 (399)
Q Consensus 88 ~~~~gDl--~~~~~~~---------------~~~~~~~---~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~ 138 (399)
..+.+|+ ++++..- ...+... +.+.++|++|||||... + .+.++..+++|+
T Consensus 75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence 5678888 4332000 0122222 22346899999996421 1 256788899999
Q ss_pred HHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 015874 139 LGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (399)
Q Consensus 139 ~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (399)
.+...+++++.+. ....++|++||........
T Consensus 155 ~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p----------------------------------------------- 187 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPGGASISLTYIASERIIP----------------------------------------------- 187 (303)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEechhhcCCCC-----------------------------------------------
Confidence 9999999987763 2236899999875322100
Q ss_pred cccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccc
Q 015874 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (399)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (399)
.....|+.+|...+.+.+.. . .++++..+-||.|-.+.....+. . ......... .
T Consensus 188 --------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-~------~~~~~~~~~-~--- 248 (303)
T PLN02730 188 --------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-I------DDMIEYSYA-N--- 248 (303)
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-c------HHHHHHHHh-c---
Confidence 01135999999999998766 2 47999999999887754311100 0 011111111 0
Q ss_pred ccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 292 ~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+ ...+...+|++.+++.++...... -.+..+.+.++
T Consensus 249 ~p-----l~r~~~peevA~~~~fLaS~~a~~-itG~~l~vdGG 285 (303)
T PLN02730 249 AP-----LQKELTADEVGNAAAFLASPLASA-ITGATIYVDNG 285 (303)
T ss_pred CC-----CCCCcCHHHHHHHHHHHhCccccC-ccCCEEEECCC
Confidence 01 012356789999999988632221 12566766655
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.2e-11 Score=110.51 Aligned_cols=226 Identities=18% Similarity=0.187 Sum_probs=142.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.||++++||+.|.||.+++++|+++| .++.+..-+.+..+...++++ .. ....+.|
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg---ik~~~i~~~~En~~a~akL~a-------------i~-------p~~~v~F 59 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG---IKVLVIDDSEENPEAIAKLQA-------------IN-------PSVSVIF 59 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC---chheeehhhhhCHHHHHHHhc-------------cC-------CCceEEE
Confidence 459999999999999999999999999 444555445544444444332 22 2478999
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc----c--CCceEEEEecc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC----V--KLKVFVHVSTA 163 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~----~--~~~~~v~~SS~ 163 (399)
+++|+++........+.....+..+|++||.||... +.+++..+.+|+.|+.+-..++..+ + +..-+|.+||.
T Consensus 60 ~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv 138 (261)
T KOG4169|consen 60 IKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV 138 (261)
T ss_pred EEeccccHHHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc
Confidence 999999744322222222234457999999999855 5668999999999988888777665 2 23456778865
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|..+- .....|+.||...-.+.+
T Consensus 139 --~GL~P~------------------------------------------------------p~~pVY~AsKaGVvgFTR 162 (261)
T KOG4169|consen 139 --AGLDPM------------------------------------------------------PVFPVYAASKAGVVGFTR 162 (261)
T ss_pred --cccCcc------------------------------------------------------ccchhhhhcccceeeeeh
Confidence 443210 112358888775433333
Q ss_pred H------h-hCCCcEEEEecCceecCCCCCC---CCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 244 Q------S-KENLSLVIIRPTVVSGTYKEPF---PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 244 ~------~-~~~~~~~i~Rp~~V~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
. + +.|+++..+-||.+-..-.+.+ .+|.+....+...+.+ ..-..-.+|+..++
T Consensus 163 Sla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~----------------~~~q~~~~~a~~~v 226 (261)
T KOG4169|consen 163 SLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER----------------APKQSPACCAINIV 226 (261)
T ss_pred hhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH----------------cccCCHHHHHHHHH
Confidence 2 1 4699999999997655332222 2233221111111111 11223458999999
Q ss_pred HHHHhccCCCCCCcEEEecCCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSL 335 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~ 335 (399)
.+++...+ +.+|-+..+.
T Consensus 227 ~aiE~~~N----Gaiw~v~~g~ 244 (261)
T KOG4169|consen 227 NAIEYPKN----GAIWKVDSGS 244 (261)
T ss_pred HHHhhccC----CcEEEEecCc
Confidence 99985332 6788887763
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.9e-10 Score=104.48 Aligned_cols=225 Identities=18% Similarity=0.134 Sum_probs=149.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
...++-|+.||.|+++++.....+ +.|..+.|+..+. .+ +.....+.++.+
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~k~-~l-------------------------~sw~~~vswh~g 103 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVV---HSVGILSENENKQ-TL-------------------------SSWPTYVSWHRG 103 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccCcc-hh-------------------------hCCCcccchhhc
Confidence 357889999999999999999988 5568888886532 11 112367788888
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|..+ .+........+..++.+++..+ +...+..+|-....+-.+++.+. ++++|+|+|... +|...
T Consensus 104 nsfs-------sn~~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d-~~~~~-- 169 (283)
T KOG4288|consen 104 NSFS-------SNPNKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYISAHD-FGLPP-- 169 (283)
T ss_pred cccc-------cCcchhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhh-cCCCC--
Confidence 8774 3323244557777887776532 23445667777778888888886 999999999653 22110
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcEE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSLV 252 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~~ 252 (399)
--+.+|..+|..+|.-+... .+++-.
T Consensus 170 -----------------------------------------------------~i~rGY~~gKR~AE~Ell~~-~~~rgi 195 (283)
T KOG4288|consen 170 -----------------------------------------------------LIPRGYIEGKREAEAELLKK-FRFRGI 195 (283)
T ss_pred -----------------------------------------------------ccchhhhccchHHHHHHHHh-cCCCce
Confidence 11358999999999888775 348889
Q ss_pred EEecCceecCCCCCCCCcccCcchHHHHHHHhhcCc---cccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN---LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 253 i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
++|||.+||.+. ..+....+..+...+.....+. ...++--+....+.+.+++||.+.+.++.. +. |
T Consensus 196 ilRPGFiyg~R~--v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~d-p~-------f 265 (283)
T KOG4288|consen 196 ILRPGFIYGTRN--VGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIED-PD-------F 265 (283)
T ss_pred eeccceeecccc--cCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccC-CC-------c
Confidence 999999999843 4443333333333333333222 223333345678999999999999998873 22 2
Q ss_pred EecCCCCCcccHHHHHHHHHH
Q 015874 330 HVGSSLRNPVTLVSILDYGFV 350 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~ 350 (399)
- + .+++.||.+...+
T Consensus 266 ~--G----vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 266 K--G----VVTIEEIKKAAHK 280 (283)
T ss_pred C--c----eeeHHHHHHHHHH
Confidence 2 2 2667777665443
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.7e-11 Score=111.90 Aligned_cols=217 Identities=16% Similarity=0.155 Sum_probs=141.9
Q ss_pred cCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCC
Q 015874 19 GVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDIS 95 (399)
Q Consensus 19 Gat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~ 95 (399)
|++ +.||.++++.|+++| .+|.+..|+.++. ...+++.+ +. ...++.+|++
T Consensus 1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~~~~~~~~l~~-------------~~----------~~~~~~~D~~ 54 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEKLADALEELAK-------------EY----------GAEVIQCDLS 54 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHHHHHHHHHHHH-------------HT----------TSEEEESCTT
T ss_pred CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHH-------------Hc----------CCceEeecCc
Confidence 666 999999999999999 6678888887542 22223222 21 1235999999
Q ss_pred CCCCCCCchhhHHHHh-cCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEec
Q 015874 96 SEDLGLKDSNLKEELW-NELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVST 162 (399)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS 162 (399)
+++......+...+.+ .++|++||+|+.... .+.+...+++|+.+...+++++.+. ++...+|++||
T Consensus 55 ~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss 134 (241)
T PF13561_consen 55 DEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISS 134 (241)
T ss_dssp SHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccc
Confidence 7554222233333345 789999999987542 1457778999999999999988653 23467899988
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
....... .....|+.+|...+.+.
T Consensus 135 ~~~~~~~--------------------------------------------------------~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 135 IAAQRPM--------------------------------------------------------PGYSAYSASKAALEGLT 158 (241)
T ss_dssp GGGTSBS--------------------------------------------------------TTTHHHHHHHHHHHHHH
T ss_pred hhhcccC--------------------------------------------------------ccchhhHHHHHHHHHHH
Confidence 7532211 22347999999999999
Q ss_pred HHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 243 QQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 243 ~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
+.+ . .|+++..+.||.|..+.. ........+...... .. ....+...+|+|+++..++
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~t~~~-------~~~~~~~~~~~~~~~----~~-----pl~r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIETPMT-------ERIPGNEEFLEELKK----RI-----PLGRLGTPEEVANAVLFLA 222 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBSSHHH-------HHHHTHHHHHHHHHH----HS-----TTSSHBEHHHHHHHHHHHH
T ss_pred HHHHHHhccccCeeeeeecccceeccch-------hccccccchhhhhhh----hh-----ccCCCcCHHHHHHHHHHHh
Confidence 866 5 799999999998876432 100001112221111 11 1123458899999999999
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
..... .-.|..+.+.++
T Consensus 223 s~~a~-~itG~~i~vDGG 239 (241)
T PF13561_consen 223 SDAAS-YITGQVIPVDGG 239 (241)
T ss_dssp SGGGT-TGTSEEEEESTT
T ss_pred Ccccc-CccCCeEEECCC
Confidence 74322 222677877765
|
... |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.6e-11 Score=105.67 Aligned_cols=221 Identities=19% Similarity=0.233 Sum_probs=150.9
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.-++.|+.|++||+.-.||+.++.+|.+.| .+|.++.|.+.....+ ..+ .+..
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a~L~sL----------------V~e--------~p~~ 54 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEANLLSL----------------VKE--------TPSL 54 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHHHHHHH----------------Hhh--------CCcc
Confidence 456889999999999999999999999999 6779999987543222 222 1345
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccC---c----cccHHHHHHHhHHHHHHHHHHHHhc----c
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITK---F----DERYDVAFGINTLGVIHLVNFAKKC----V 152 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~---~----~~~~~~~~~~n~~~~~~ll~~a~~~----~ 152 (399)
++.+.+|++ +.+...+.+. -+|.++|+||..- + .+.++..|+.|+.+..++.+...+. .
T Consensus 55 I~Pi~~Dls-------~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~ 127 (245)
T KOG1207|consen 55 IIPIVGDLS-------AWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ 127 (245)
T ss_pred eeeeEeccc-------HHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc
Confidence 889999999 5555555554 3799999999752 1 2567777889999999998874432 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
....+|.+||.+..- +.+.++.|.
T Consensus 128 ~~GaIVNvSSqas~R--------------------------------------------------------~~~nHtvYc 151 (245)
T KOG1207|consen 128 IKGAIVNVSSQASIR--------------------------------------------------------PLDNHTVYC 151 (245)
T ss_pred CCceEEEecchhccc--------------------------------------------------------ccCCceEEe
Confidence 344689999875322 234467899
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|.+-+++.+.. ...+++..+.|..|...-.. ..|.+.-+ ...+... -..--|.-+++
T Consensus 152 atKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K-------------~k~mL~r-iPl~rFaEV~e 215 (245)
T KOG1207|consen 152 ATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDK-------------KKKMLDR-IPLKRFAEVDE 215 (245)
T ss_pred ecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchh-------------ccchhhh-CchhhhhHHHH
Confidence 9999999988765 45689999999999875431 33444311 0011110 01234778899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++++..++..+.+-. .+....+.++
T Consensus 216 VVnA~lfLLSd~ssmt-tGstlpveGG 241 (245)
T KOG1207|consen 216 VVNAVLFLLSDNSSMT-TGSTLPVEGG 241 (245)
T ss_pred HHhhheeeeecCcCcc-cCceeeecCC
Confidence 9999998887443321 1444444443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.8e-10 Score=101.07 Aligned_cols=233 Identities=16% Similarity=0.165 Sum_probs=141.4
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
.++.+.-+.++||||+..||++++..|.+.|. +|.+..++...+++. ...| |. ..
T Consensus 8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~Ga---rv~v~dl~~~~A~at---a~~L-------------~g------~~ 62 (256)
T KOG1200|consen 8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGA---RVAVADLDSAAAEAT---AGDL-------------GG------YG 62 (256)
T ss_pred HHHHHhcceeEEecCCchHHHHHHHHHHhcCc---EEEEeecchhhHHHH---Hhhc-------------CC------CC
Confidence 45667778999999999999999999999995 445555544332222 1111 00 02
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC-
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL- 154 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~- 154 (399)
.-..+.+|+++.+......+...+.+..+++++||||+... .+.|+..+..|+.|+....+++-+. ...
T Consensus 63 ~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~ 142 (256)
T KOG1200|consen 63 DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQ 142 (256)
T ss_pred ccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCC
Confidence 33456899997653222112222345579999999999853 3679999999999999998877553 223
Q ss_pred -ceEEEEecc-eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 155 -KVFVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 155 -~~~v~~SS~-~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
-.+|.+||+ +-.|... .+.|.. ...-.-+
T Consensus 143 ~~sIiNvsSIVGkiGN~G----QtnYAA---------------------------------------------sK~GvIg 173 (256)
T KOG1200|consen 143 GLSIINVSSIVGKIGNFG----QTNYAA---------------------------------------------SKGGVIG 173 (256)
T ss_pred CceEEeehhhhccccccc----chhhhh---------------------------------------------hcCceee
Confidence 379999986 2222211 010100 0001234
Q ss_pred HhHHHHHHHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 233 FTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 233 ~sK~~~E~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+|.++.++.+ .++++.++-||.|-.|-.+..| ...+..+....+. ..+-..+|+|+.+
T Consensus 174 ftktaArEla~---knIrvN~VlPGFI~tpMT~~mp---------~~v~~ki~~~iPm---------gr~G~~EevA~~V 232 (256)
T KOG1200|consen 174 FTKTAARELAR---KNIRVNVVLPGFIATPMTEAMP---------PKVLDKILGMIPM---------GRLGEAEEVANLV 232 (256)
T ss_pred eeHHHHHHHhh---cCceEeEeccccccChhhhhcC---------HHHHHHHHccCCc---------cccCCHHHHHHHH
Confidence 45666655554 4899999999999886653221 1334444432211 2233457999998
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.+.. +..+--.+..+.+.++
T Consensus 233 ~fLAS-~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 233 LFLAS-DASSYITGTTLEVTGG 253 (256)
T ss_pred HHHhc-cccccccceeEEEecc
Confidence 87774 3332223667777665
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.1e-10 Score=107.16 Aligned_cols=168 Identities=17% Similarity=0.165 Sum_probs=123.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
....+|.|||||+....|..++++|.++| ..|.+-+-.++..+.+.... ..++.
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~gae~L~~~~-----------------------~s~rl 78 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGAESLRGET-----------------------KSPRL 78 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchHHHHhhhh-----------------------cCCcc
Confidence 44667899999999999999999999999 55577775544433332211 14677
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
.-++.|+++++...+...++++..+ +.=.||||||+..+ .+++..++++|+.|+..+.++.... +...
T Consensus 79 ~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arG 158 (322)
T KOG1610|consen 79 RTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARG 158 (322)
T ss_pred eeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccC
Confidence 8889999987765545555544443 36799999997643 2678889999999998888877664 2457
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
|+|++||..- ... .+.-.+|+.||
T Consensus 159 RvVnvsS~~G--R~~------------------------------------------------------~p~~g~Y~~SK 182 (322)
T KOG1610|consen 159 RVVNVSSVLG--RVA------------------------------------------------------LPALGPYCVSK 182 (322)
T ss_pred eEEEeccccc--Ccc------------------------------------------------------CcccccchhhH
Confidence 9999998852 111 12245799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecC
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPT 257 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~ 257 (399)
++.|...... ..|+++.++-||
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 9999988655 569999999999
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.2e-10 Score=98.37 Aligned_cols=163 Identities=22% Similarity=0.195 Sum_probs=120.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|.+||.||||..|+.+++.+.+.+ ...+|+++.|++....+. ..++..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~~~d~at----------------------------~k~v~q 66 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRELPDPAT----------------------------DKVVAQ 66 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEeccCCCccc----------------------------cceeee
Confidence 677899999999999999999988865 558999999986433221 246666
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
...|... ..+.. ..++++|+.+.+-|-+......+..+.++-.-...+.+++++ ++|++|+.+||.++-..
T Consensus 67 ~~vDf~K------l~~~a-~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe-~Gck~fvLvSS~GAd~s- 137 (238)
T KOG4039|consen 67 VEVDFSK------LSQLA-TNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKE-KGCKTFVLVSSAGADPS- 137 (238)
T ss_pred EEechHH------HHHHH-hhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHh-CCCeEEEEEeccCCCcc-
Confidence 7778774 23333 556789999999887765444444555555666778888998 49999999999875332
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
....|-..|...|+-+.+.+- -
T Consensus 138 ---------------------------------------------------------SrFlY~k~KGEvE~~v~eL~F-~ 159 (238)
T KOG4039|consen 138 ---------------------------------------------------------SRFLYMKMKGEVERDVIELDF-K 159 (238)
T ss_pred ---------------------------------------------------------cceeeeeccchhhhhhhhccc-c
Confidence 134688999999988877521 2
Q ss_pred cEEEEecCceecCCCCCCC
Q 015874 250 SLVIIRPTVVSGTYKEPFP 268 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~ 268 (399)
...|+|||.+.|.+.+.-+
T Consensus 160 ~~~i~RPG~ll~~R~esr~ 178 (238)
T KOG4039|consen 160 HIIILRPGPLLGERTESRQ 178 (238)
T ss_pred EEEEecCcceecccccccc
Confidence 6899999999998886533
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.8e-10 Score=101.11 Aligned_cols=240 Identities=14% Similarity=0.089 Sum_probs=148.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHH-----HHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKI-----LRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~L-----l~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
-++...++-+++|+|+..|.-.. -..+ .+-+.|++++|.+.+.
T Consensus 10 ~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~------------------------------- 58 (315)
T KOG3019|consen 10 GKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA------------------------------- 58 (315)
T ss_pred CccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------------------------------
Confidence 34457888899999997776522 1212 1115678888887643
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC--ccccHHHHHHHh-----HHHHHHHHHHHHhcc-CCc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--FDERYDVAFGIN-----TLGVIHLVNFAKKCV-KLK 155 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~--~~~~~~~~~~~n-----~~~~~~ll~~a~~~~-~~~ 155 (399)
++++.+.|.. .+...||.+++.++... ....+...++-+ +..+..+.+++...+ ..+
T Consensus 59 --ritw~el~~~-------------Gip~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~ 123 (315)
T KOG3019|consen 59 --RITWPELDFP-------------GIPISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEAR 123 (315)
T ss_pred --ccccchhcCC-------------CCceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCC
Confidence 4555554433 11224566666665432 123344444444 445777888888763 456
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
.+|.+|..++|-.+.. +.|+|+.+. +. ..| .++
T Consensus 124 ~~Vlv~gva~y~pS~s----~eY~e~~~~-----------------------------------------qg-fd~-~sr 156 (315)
T KOG3019|consen 124 PTVLVSGVAVYVPSES----QEYSEKIVH-----------------------------------------QG-FDI-LSR 156 (315)
T ss_pred CeEEEEeeEEeccccc----ccccccccc-----------------------------------------CC-hHH-HHH
Confidence 8999999999986531 223222210 11 112 122
Q ss_pred HHHHHH--HHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 236 TMGEML--MQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 236 ~~~E~~--l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
...|.- ........+++++|.|.|.|.+.+. +..+ .+.-++..| ...++|++.++|||++|++..+.
T Consensus 157 L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa----~~~M----~lpF~~g~G---GPlGsG~Q~fpWIHv~DL~~li~ 225 (315)
T KOG3019|consen 157 LCLEWEGAALKANKDVRVALIRIGVVLGKGGGA----LAMM----ILPFQMGAG---GPLGSGQQWFPWIHVDDLVNLIY 225 (315)
T ss_pred HHHHHHHHhhccCcceeEEEEEEeEEEecCCcc----hhhh----hhhhhhccC---CcCCCCCeeeeeeehHHHHHHHH
Confidence 222211 1111356899999999999987632 2210 001122222 22478899999999999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~ 359 (399)
.++++. .. .++.|-+.+ ++++..|+.+.+..+++++.|..
T Consensus 226 ~ale~~-~v---~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp~~~p 265 (315)
T KOG3019|consen 226 EALENP-SV---KGVINGVAP--NPVRNGEFCQQLGSALSRPSWLP 265 (315)
T ss_pred HHHhcC-CC---CceecccCC--CccchHHHHHHHHHHhCCCcccC
Confidence 999843 33 357899998 88999999999999999877663
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.7e-10 Score=100.01 Aligned_cols=160 Identities=16% Similarity=0.237 Sum_probs=104.7
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
+++||||+|.||..+++.|++++. .++.++.|+. ...... +..+++ +. .+.++.++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~-~~i~~l---------~~---------~g~~v~~~~~ 60 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAE-AAIREL---------ES---------AGARVEYVQC 60 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHH-HHHHHH---------HH---------TT-EEEEEE-
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHH-HHHHHH---------Hh---------CCCceeeecc
Confidence 689999999999999999999983 5788888883 222222 111111 11 1468999999
Q ss_pred cCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 015874 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v 158 (399)
|++++ +.+.+++ ..++.|||+|+.... .+.....+..-+.+..+|.++.... ++..||
T Consensus 61 Dv~d~-------~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i 132 (181)
T PF08659_consen 61 DVTDP-------EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFI 132 (181)
T ss_dssp -TTSH-------HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEE
T ss_pred CccCH-------HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEE
Confidence 99954 3333333 357899999997632 2345666777899999999998884 888999
Q ss_pred EEecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 159 HVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 159 ~~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
..||+. +.|... ...|+.+-..
T Consensus 133 ~~SSis~~~G~~g---------------------------------------------------------q~~YaaAN~~ 155 (181)
T PF08659_consen 133 LFSSISSLLGGPG---------------------------------------------------------QSAYAAANAF 155 (181)
T ss_dssp EEEEHHHHTT-TT---------------------------------------------------------BHHHHHHHHH
T ss_pred EECChhHhccCcc---------------------------------------------------------hHhHHHHHHH
Confidence 988875 344321 2569888888
Q ss_pred HHHHHHHh-hCCCcEEEEecCce
Q 015874 238 GEMLMQQS-KENLSLVIIRPTVV 259 (399)
Q Consensus 238 ~E~~l~~~-~~~~~~~i~Rp~~V 259 (399)
.+.+.... ..+.++..+..+..
T Consensus 156 lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 156 LDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHHHHHhCCCCEEEEEcccc
Confidence 88887766 67888888886543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.7e-10 Score=99.94 Aligned_cols=213 Identities=13% Similarity=0.201 Sum_probs=138.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..+.|+||||+-.||--|+++|++ ...+..+...+|+.+++ .+.+.. ....+.+++.+
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk-~~~i~~iiat~r~~e~a--~~~l~~-------------------k~~~d~rvHii 59 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK-DKGIEVIIATARDPEKA--ATELAL-------------------KSKSDSRVHII 59 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc-CCCcEEEEEecCChHHh--hHHHHH-------------------hhccCCceEEE
Confidence 456799999999999999999996 45555566677766654 221111 12246899999
Q ss_pred eccCCCCCCCCCchhhHHHH--hcCccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHHHhc---cC----
Q 015874 91 PGDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC---VK---- 153 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~--~~~~D~Vih~Aa~~~-~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~---- 153 (399)
+.|+++.+.-.+..+.++++ ..++|++|++||... + .+.+..++++|..+...+.+.+... ..
T Consensus 60 ~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~ 139 (249)
T KOG1611|consen 60 QLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVS 139 (249)
T ss_pred EEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhccc
Confidence 99999865533333344344 346899999999752 2 2457778999999888877765443 11
Q ss_pred -------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 154 -------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 154 -------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
.-.+|++||.+...... . -.
T Consensus 140 gd~~s~~raaIinisS~~~s~~~~-------~----------------------------------------------~~ 166 (249)
T KOG1611|consen 140 GDGLSVSRAAIINISSSAGSIGGF-------R----------------------------------------------PG 166 (249)
T ss_pred CCcccccceeEEEeeccccccCCC-------C----------------------------------------------Cc
Confidence 22688888875431100 0 02
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccC
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
+...|..||.+...+.+.. ..++-++.+.||.|-..-. + .-.
T Consensus 167 ~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg-----------------------------g----~~a 213 (249)
T KOG1611|consen 167 GLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG-----------------------------G----KKA 213 (249)
T ss_pred chhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC-----------------------------C----CCc
Confidence 2357999999999998876 4467777888777654221 0 123
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEec
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~ 332 (399)
.+.+++-+.-++..+.+-.+.+. |..||-.
T Consensus 214 ~ltveeSts~l~~~i~kL~~~hn-G~ffn~d 243 (249)
T KOG1611|consen 214 ALTVEESTSKLLASINKLKNEHN-GGFFNRD 243 (249)
T ss_pred ccchhhhHHHHHHHHHhcCcccC-cceEccC
Confidence 45667777777777775333222 5666653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.1e-10 Score=98.68 Aligned_cols=166 Identities=17% Similarity=0.197 Sum_probs=115.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+-|.+||||||+..||..|++++++.| .+|.+..|++... +...++ .+.+.-
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~e~~L---~e~~~~----------------------~p~~~t 54 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELG---NTVIICGRNEERL---AEAKAE----------------------NPEIHT 54 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCcHHHH---HHHHhc----------------------Ccchhe
Confidence 457799999999999999999999999 6778888886543 222221 256777
Q ss_pred EeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
+.+|+.|.+. ..+..+.+. ...+++|||||+... .+....-+.+|+.+..+|..+..+. ++-
T Consensus 55 ~v~Dv~d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~ 131 (245)
T COG3967 55 EVCDVADRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE 131 (245)
T ss_pred eeecccchhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Confidence 8899996543 233443333 358999999998632 1234556888999999998887764 234
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
..+|.+||.-.+-.- .....|..+
T Consensus 132 a~IInVSSGLafvPm--------------------------------------------------------~~~PvYcaT 155 (245)
T COG3967 132 ATIINVSSGLAFVPM--------------------------------------------------------ASTPVYCAT 155 (245)
T ss_pred ceEEEeccccccCcc--------------------------------------------------------cccccchhh
Confidence 578889987543321 112359999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
|++........ ..++.+.=+-|+.|-.+
T Consensus 156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 99877655433 34678888888888775
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.4e-09 Score=102.97 Aligned_cols=152 Identities=11% Similarity=0.058 Sum_probs=94.1
Q ss_pred hcCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCC
Q 015874 111 WNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDG 180 (399)
Q Consensus 111 ~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~ 180 (399)
+.++|++||+||... + .+.++..+++|+.+..++++++.+. ....+++.+||........
T Consensus 117 ~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p---------- 186 (299)
T PRK06300 117 FGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVP---------- 186 (299)
T ss_pred cCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCC----------
Confidence 457999999997532 1 2567888999999999999988763 3335788888754321100
Q ss_pred CCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEE
Q 015874 181 ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVII 254 (399)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~ 254 (399)
.....|+.+|+..+.+.+.+ . .|+++..+
T Consensus 187 ---------------------------------------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V 221 (299)
T PRK06300 187 ---------------------------------------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTI 221 (299)
T ss_pred ---------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 00125999999999888765 2 38999999
Q ss_pred ecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 255 RPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 255 Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.||.|-.+...... . .......... . .+ .......+|+|+++..++..... .-.+..+.+.++
T Consensus 222 ~PG~v~T~~~~~~~----~---~~~~~~~~~~-~---~p-----~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 284 (299)
T PRK06300 222 SAGPLASRAGKAIG----F---IERMVDYYQD-W---AP-----LPEPMEAEQVGAAAAFLVSPLAS-AITGETLYVDHG 284 (299)
T ss_pred EeCCccChhhhccc----c---cHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 99998765321100 0 0011111111 1 11 11245679999999988863222 112567777665
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.5e-09 Score=103.02 Aligned_cols=164 Identities=22% Similarity=0.234 Sum_probs=107.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+..+.++|||+||||.+|+-+++.|+++| ..|.+++|+..+.....+.. ......
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a~~~~~~~----------------------~~d~~~ 129 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKAEDLLGVF----------------------FVDLGL 129 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhhhhhhccc----------------------cccccc
Confidence 34556799999999999999999999999 56699999976543321100 001233
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc----CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN----ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~----~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
..+..|... ..+....+.+ ...+++-+++-....++...-..++..|+.|++++|+.. ++++|+++||+
T Consensus 130 ~~v~~~~~~------~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si 202 (411)
T KOG1203|consen 130 QNVEADVVT------AIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSI 202 (411)
T ss_pred ceeeecccc------ccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEee
Confidence 334444332 2222223332 244666666544333211222456789999999999987 99999999888
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc------hhhHhHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN------TYVFTKTM 237 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~sK~~ 237 (399)
+..... .+++ .+-.+|.+
T Consensus 203 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~~~~k~~ 226 (411)
T KOG1203|consen 203 GGTKFN--------------------------------------------------------QPPNILLLNGLVLKAKLK 226 (411)
T ss_pred cCcccC--------------------------------------------------------CCchhhhhhhhhhHHHHh
Confidence 643321 1122 34488899
Q ss_pred HHHHHHHhhCCCcEEEEecCceec
Q 015874 238 GEMLMQQSKENLSLVIIRPTVVSG 261 (399)
Q Consensus 238 ~E~~l~~~~~~~~~~i~Rp~~V~G 261 (399)
+|..+++ .|++.+++|++...-
T Consensus 227 ~e~~~~~--Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 227 AEKFLQD--SGLPYTIIRPGGLEQ 248 (411)
T ss_pred HHHHHHh--cCCCcEEEecccccc
Confidence 9999887 799999999987654
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.5e-10 Score=98.95 Aligned_cols=168 Identities=14% Similarity=0.117 Sum_probs=117.8
Q ss_pred CcEEEEecC-cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGV-TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGa-tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+.|+|||+ .|.||-+|++.+.++| ..|++..|+.+.- ..+.. ..++...
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~M---~~L~~-----------------------~~gl~~~ 57 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEPM---AQLAI-----------------------QFGLKPY 57 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccchH---hhHHH-----------------------hhCCeeE
Confidence 367888875 6899999999999999 5668888886532 11110 1467788
Q ss_pred eccCCCCCCCCCchhhHHH-HhcCccEEEEccccc-Cc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEE-LWNELDIMVNSAAIT-KF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~-~~~~~D~Vih~Aa~~-~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
+.|+++++........+.. ...+.|+++|+||.. .+ .+..+.++.+|+.|..++.++.... +....+|++
T Consensus 58 kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnv 137 (289)
T KOG1209|consen 58 KLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNV 137 (289)
T ss_pred EeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEe
Confidence 9999976543322222211 123589999999975 12 2567788999999988888877653 355689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
.|...|-. .++.+.|..||++...
T Consensus 138 gSl~~~vp--------------------------------------------------------fpf~~iYsAsKAAiha 161 (289)
T KOG1209|consen 138 GSLAGVVP--------------------------------------------------------FPFGSIYSASKAAIHA 161 (289)
T ss_pred cceeEEec--------------------------------------------------------cchhhhhhHHHHHHHH
Confidence 99987763 2445679999999887
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCC
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
..... .-|++++.+-+|.|-..-.
T Consensus 162 y~~tLrlEl~PFgv~Vin~itGGv~T~Ia 190 (289)
T KOG1209|consen 162 YARTLRLELKPFGVRVINAITGGVATDIA 190 (289)
T ss_pred hhhhcEEeeeccccEEEEecccceecccc
Confidence 76654 3477778777777655443
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-09 Score=99.83 Aligned_cols=221 Identities=12% Similarity=0.021 Sum_probs=126.7
Q ss_pred HHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCCCCCCCCCchhhH
Q 015874 28 FIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLK 107 (399)
Q Consensus 28 l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~ 107 (399)
+++.|+++| ++|.+..|+..... ..+++++|+++.+. ..+..
T Consensus 1 ~a~~l~~~G---~~Vv~~~r~~~~~~--------------------------------~~~~~~~Dl~~~~~---v~~~~ 42 (241)
T PRK12428 1 TARLLRFLG---ARVIGVDRREPGMT--------------------------------LDGFIQADLGDPAS---IDAAV 42 (241)
T ss_pred ChHHHHhCC---CEEEEEeCCcchhh--------------------------------hhHhhcccCCCHHH---HHHHH
Confidence 468889999 55688888764320 12346889995332 11122
Q ss_pred HHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCC-ccccccCCCCCCCC
Q 015874 108 EELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTG-LILENPLDGASGLD 185 (399)
Q Consensus 108 ~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~-~~~e~~~~~~~~~~ 185 (399)
..+..++|+|||+||... ...++..+++|+.++..+++++.+. .+..+||++||...++.... ...+...
T Consensus 43 ~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~------- 114 (241)
T PRK12428 43 AALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALA------- 114 (241)
T ss_pred HHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhh-------
Confidence 122236999999999753 3567888999999999999998763 23468999999988763210 0000000
Q ss_pred hhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh------hCCCcEEEEecCce
Q 015874 186 FDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIRPTVV 259 (399)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~------~~~~~~~i~Rp~~V 259 (399)
.+.+.+.++.... ..+......|+.+|++.+.+.+.. ..|++++.++||.|
T Consensus 115 --------------------~~~~~~~~~~~~~---~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v 171 (241)
T PRK12428 115 --------------------ATASFDEGAAWLA---AHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPV 171 (241)
T ss_pred --------------------ccchHHHHHHhhh---ccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCc
Confidence 0011111111100 012233468999999998877533 35899999999999
Q ss_pred ecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 260 SGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 260 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... ..... ..... . . .. ....+...+|+|++++.++..... .-.+....+.++
T Consensus 172 ~T~~~~~~---~~~~~--~~~~~---~-~--~~-----~~~~~~~pe~va~~~~~l~s~~~~-~~~G~~i~vdgg 229 (241)
T PRK12428 172 FTPILGDF---RSMLG--QERVD---S-D--AK-----RMGRPATADEQAAVLVFLCSDAAR-WINGVNLPVDGG 229 (241)
T ss_pred cCcccccc---hhhhh--hHhhh---h-c--cc-----ccCCCCCHHHHHHHHHHHcChhhc-CccCcEEEecCc
Confidence 88643110 00000 00000 0 0 00 111246789999999988753222 112455555554
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.3e-08 Score=85.56 Aligned_cols=197 Identities=14% Similarity=0.107 Sum_probs=124.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+||||-+|+.|++..+.+| +.|++++|+..+.... +.+..++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~~~~-----------------------------~~~~i~q~ 48 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKLAAR-----------------------------QGVTILQK 48 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhcccc-----------------------------ccceeecc
Confidence 689999999999999999999999 5569999998765332 46778899
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce-eecCcCC
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY-VAGERTG 171 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~-v~~~~~~ 171 (399)
|+.+ .+.....+.+.|+||..-+.... .. .. ........|++.++.. ++.|++.+..++ .|-....
T Consensus 49 Difd-------~~~~a~~l~g~DaVIsA~~~~~~-~~-~~---~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~ 115 (211)
T COG2910 49 DIFD-------LTSLASDLAGHDAVISAFGAGAS-DN-DE---LHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGT 115 (211)
T ss_pred cccC-------hhhhHhhhcCCceEEEeccCCCC-Ch-hH---HHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCc
Confidence 9995 33334667899999987655321 11 11 1223355677777775 778887766542 2222221
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH-hhCCCc
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ-SKENLS 250 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-~~~~~~ 250 (399)
.+...+. -|-.-|..++..+|.+-.- ...+++
T Consensus 116 rLvD~p~-----------------------------------------------fP~ey~~~A~~~ae~L~~Lr~~~~l~ 148 (211)
T COG2910 116 RLVDTPD-----------------------------------------------FPAEYKPEALAQAEFLDSLRAEKSLD 148 (211)
T ss_pred eeecCCC-----------------------------------------------CchhHHHHHHHHHHHHHHHhhccCcc
Confidence 1111100 1112366777777743321 145699
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
|+.+-|+..+-|+.. +|-.. .|+-..+.+. .--..|...|.|-+++.-+++
T Consensus 149 WTfvSPaa~f~PGer--Tg~yr-------------lggD~ll~n~--~G~SrIS~aDYAiA~lDe~E~ 199 (211)
T COG2910 149 WTFVSPAAFFEPGER--TGNYR-------------LGGDQLLVNA--KGESRISYADYAIAVLDELEK 199 (211)
T ss_pred eEEeCcHHhcCCccc--cCceE-------------eccceEEEcC--CCceeeeHHHHHHHHHHHHhc
Confidence 999999999998652 11110 1111122221 234689999999999999984
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.1e-09 Score=122.64 Aligned_cols=188 Identities=11% Similarity=0.097 Sum_probs=119.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc---c-----HHHHHHHHHhh----------------
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID---S-----AALRFQNEVLA---------------- 64 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~---~-----~~~~~~~~l~~---------------- 64 (399)
+-+++++|||||+|.||..+++.|++++- .+|.++.|+.... . ....++....+
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 44689999999999999999999999831 4568888873100 0 00000000000
Q ss_pred -------hhhHHHHHhhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccH
Q 015874 65 -------KDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERY 130 (399)
Q Consensus 65 -------~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~ 130 (399)
........... ...+.++.++.+|++|.+......+..... .++|+|||+||.... .+.+
T Consensus 2072 ~~~~~~~~~ei~~~la~l-----~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f 2145 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAF-----KAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEF 2145 (2582)
T ss_pred cccccchhHHHHHHHHHH-----HhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHH
Confidence 00000000000 012457889999999654311111111111 258999999997532 2568
Q ss_pred HHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhH
Q 015874 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKE 209 (399)
Q Consensus 131 ~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (399)
+..+++|+.|+.++++++... ..++||++||... +|..
T Consensus 2146 ~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~---------------------------------------- 2184 (2582)
T TIGR02813 2146 NAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT---------------------------------------- 2184 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC----------------------------------------
Confidence 888999999999999998874 5678999998753 3321
Q ss_pred HHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh---hCCCcEEEEecCceecC
Q 015874 210 ITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~---~~~~~~~i~Rp~~V~G~ 262 (399)
....|+.+|...+.+.... ..+++++.+.+|.+-|.
T Consensus 2185 -----------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2185 -----------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred -----------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 1246999999888777655 23588999999887664
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-08 Score=96.68 Aligned_cols=210 Identities=17% Similarity=0.119 Sum_probs=131.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
.+|+|||++..||.+++..+..+| +.|.+..|+.++.+.+.+.-+.. . .-..+.+..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~kl~~a~~~l~l~---------~----------~~~~v~~~S~ 91 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG---ADVTITARSGKKLLEAKAELELL---------T----------QVEDVSYKSV 91 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHHHHHHHHhhhhhh---------h----------ccceeeEecc
Confidence 589999999999999999999999 55699999988765554322211 0 1133778889
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEccccc--C-c----cccHHHHHHHhHHHHHHHHHHHHh-ccCCc---eEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAIT--K-F----DERYDVAFGINTLGVIHLVNFAKK-CVKLK---VFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~--~-~----~~~~~~~~~~n~~~~~~ll~~a~~-~~~~~---~~v~~S 161 (399)
|+.+.+...+..+....+..-+|.+|||||.. + + .+..+...++|..|+.++.+++.. ++.+. +++.+|
T Consensus 92 d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs 171 (331)
T KOG1210|consen 92 DVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS 171 (331)
T ss_pred ccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh
Confidence 99754332222222222224579999999963 1 1 356777899999999999887654 33333 788877
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH----
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM---- 237 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~---- 237 (399)
|....-.- ...+.|+.+|++
T Consensus 172 S~~a~~~i--------------------------------------------------------~GysaYs~sK~alrgL 195 (331)
T KOG1210|consen 172 SQLAMLGI--------------------------------------------------------YGYSAYSPSKFALRGL 195 (331)
T ss_pred hhhhhcCc--------------------------------------------------------ccccccccHHHHHHHH
Confidence 75322211 112446666655
Q ss_pred HHHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 238 GEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 238 ~E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
++.+-++. ..++.++..-|+.+-.|+- -+.... .-....+... ..+.+..+++|++++.-+
T Consensus 196 a~~l~qE~i~~~v~Vt~~~P~~~~tpGf------E~En~t---------kP~~t~ii~g---~ss~~~~e~~a~~~~~~~ 257 (331)
T KOG1210|consen 196 AEALRQELIKYGVHVTLYYPPDTLTPGF------ERENKT---------KPEETKIIEG---GSSVIKCEEMAKAIVKGM 257 (331)
T ss_pred HHHHHHHHhhcceEEEEEcCCCCCCCcc------cccccc---------CchheeeecC---CCCCcCHHHHHHHHHhHH
Confidence 45554555 6788888888888777543 221000 0011112222 234588999999999877
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
.+
T Consensus 258 ~r 259 (331)
T KOG1210|consen 258 KR 259 (331)
T ss_pred hh
Confidence 63
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-07 Score=90.37 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=118.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
.=++|||||..||++.+++|+++| .+|+.++|++++.+. +.+++.. ..+-.+.++..
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG---~nvvLIsRt~~KL~~---v~kEI~~-----------------~~~vev~~i~~ 106 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRG---FNVVLISRTQEKLEA---VAKEIEE-----------------KYKVEVRIIAI 106 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcC---CEEEEEeCCHHHHHH---HHHHHHH-----------------HhCcEEEEEEE
Confidence 678999999999999999999999 557999999877543 3333311 11246788899
Q ss_pred cCCCCCCCCCchhhHHHHhcC--ccEEEEcccccC-ccc--------cHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITK-FDE--------RYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~-~~~--------~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
|.++.+. +.+.+++...+ +-++|||+|... .++ ..+..+.+|+.++..+.+..... ++...++
T Consensus 107 Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Iv 183 (312)
T KOG1014|consen 107 DFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIV 183 (312)
T ss_pred ecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEE
Confidence 9997643 23444444444 669999999864 221 23444667999988888887653 2455788
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+-.-. .+.-+.|+.+|...
T Consensus 184 nigS~ag~~p--------------------------------------------------------~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 184 NIGSFAGLIP--------------------------------------------------------TPLLSVYSASKAFV 207 (312)
T ss_pred Eecccccccc--------------------------------------------------------ChhHHHHHHHHHHH
Confidence 8988752221 12235699999876
Q ss_pred HHHHHH----h-hCCCcEEEEecCceecCCC
Q 015874 239 EMLMQQ----S-KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 239 E~~l~~----~-~~~~~~~i~Rp~~V~G~~~ 264 (399)
+.+.+. + ..|+.+..+-|..|-+...
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 655543 3 5689999999999988765
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.7e-08 Score=85.39 Aligned_cols=133 Identities=12% Similarity=0.086 Sum_probs=78.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++||||+|+||..+++.|+++| .+|.+..|+... .+...+++ .+ .+.+..
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~---~~~~~~~l---------~~---------~~~~~~ 68 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQES---GQATVEEI---------TN---------LGGEAL 68 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 4688999999999999999999999999 556777776432 12221111 00 124567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cc-cHHHHHHHhHHHHHHHHHHHHhc----------cC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DE-RYDVAFGINTLGVIHLVNFAKKC----------VK 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~-~~~~~~~~n~~~~~~ll~~a~~~----------~~ 153 (399)
++.+|+++++......+.....+.++|++||+||.... .. ........|+.++....+.+... ..
T Consensus 69 ~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (169)
T PRK06720 69 FVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSD 148 (169)
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeec
Confidence 78999996543221222222234579999999997532 11 11112234455444444433321 12
Q ss_pred CceEEEEeccee
Q 015874 154 LKVFVHVSTAYV 165 (399)
Q Consensus 154 ~~~~v~~SS~~v 165 (399)
..+|..+||.++
T Consensus 149 ~~~~~~~~~~~~ 160 (169)
T PRK06720 149 LPIFGIIGTKGQ 160 (169)
T ss_pred CceeeEeccccc
Confidence 456777777654
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.7e-08 Score=88.22 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=94.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCC--cCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPN--VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~--V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.|.++|||++..||-+||.+|++...+ +-.+.+.+|+-.+++...+ . |++-+ +....++++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~---~---------lk~f~-----p~~~i~~~y 65 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCA---A---------LKAFH-----PKSTIEVTY 65 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHH---H---------HHHhC-----CCceeEEEE
Confidence 478999999999999999999998755 2345566787766544322 1 22222 222467899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------------------------------cccHHHHHH
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------------------------DERYDVAFG 135 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------------------------------~~~~~~~~~ 135 (399)
+..|+++-........-+.+-+++.|.|+-+||+... .+...+.|+
T Consensus 66 vlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFe 145 (341)
T KOG1478|consen 66 VLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFE 145 (341)
T ss_pred EEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhh
Confidence 9999998665444444344456679999999997632 144567789
Q ss_pred HhHHHHHHHHHHHHhc--c-CCceEEEEecce
Q 015874 136 INTLGVIHLVNFAKKC--V-KLKVFVHVSTAY 164 (399)
Q Consensus 136 ~n~~~~~~ll~~a~~~--~-~~~~~v~~SS~~ 164 (399)
.|+.|..-++..+.+. . .-..+|.+||..
T Consensus 146 tnVFGhfyli~~l~pll~~~~~~~lvwtSS~~ 177 (341)
T KOG1478|consen 146 TNVFGHFYLIRELEPLLCHSDNPQLVWTSSRM 177 (341)
T ss_pred hcccchhhhHhhhhhHhhcCCCCeEEEEeecc
Confidence 9999999998877653 2 223788899874
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.7e-07 Score=84.21 Aligned_cols=170 Identities=19% Similarity=0.208 Sum_probs=107.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.++.||+||++-.||..++..+.+++.++ .++...|.....+.+ .-..+......
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~~~~L------------------------~v~~gd~~v~~ 59 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAELEGL------------------------KVAYGDDFVHV 59 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhcccccccce------------------------EEEecCCccee
Confidence 35789999999999999999999988553 222222322111000 00001222233
Q ss_pred eccCCCCCCCCCchhhHHH---HhcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc-cC---
Q 015874 91 PGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC-VK--- 153 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~---~~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~--- 153 (399)
.+|++.... ..+..+. -..+-|+|||+||.... ...++.+++.|+.++..|.+.+.+. ++
T Consensus 60 ~g~~~e~~~---l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~ 136 (253)
T KOG1204|consen 60 VGDITEEQL---LGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV 136 (253)
T ss_pred chHHHHHHH---HHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence 455552211 0111111 11257999999997531 2568899999999999998876653 22
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
.+-+|++||.+..-.- ..-..|+.
T Consensus 137 ~~~vVnvSS~aav~p~--------------------------------------------------------~~wa~yc~ 160 (253)
T KOG1204|consen 137 NGNVVNVSSLAAVRPF--------------------------------------------------------SSWAAYCS 160 (253)
T ss_pred cCeEEEecchhhhccc--------------------------------------------------------cHHHHhhh
Confidence 3678999987644321 22357999
Q ss_pred hHHHHHHHHHHh---hC-CCcEEEEecCceecCCC
Q 015874 234 TKTMGEMLMQQS---KE-NLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 234 sK~~~E~~l~~~---~~-~~~~~i~Rp~~V~G~~~ 264 (399)
+|++-++++... ++ ++.+..++||.|=..-+
T Consensus 161 ~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq 195 (253)
T KOG1204|consen 161 SKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ 195 (253)
T ss_pred hHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence 999999998876 43 78899999998876544
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.6e-06 Score=76.41 Aligned_cols=228 Identities=16% Similarity=0.154 Sum_probs=136.5
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+|+||++||+|..- .|+..|+++|.++|. ++......+. ..+|+++ |.+++ ..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA---eL~fTy~~e~---l~krv~~----------la~~~---------~s 57 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA---ELAFTYQGER---LEKRVEE----------LAEEL---------GS 57 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCC---EEEEEeccHH---HHHHHHH----------HHhhc---------cC
Confidence 68999999999754 699999999999994 4444444331 1122221 12221 12
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
...+++|+++.+......+.+.+.+.++|.+||+-|...- .+.+....++...+...+.++++.. ++-
T Consensus 58 ~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~g 137 (259)
T COG0623 58 DLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNG 137 (259)
T ss_pred CeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCC
Confidence 4567999997554433444444556679999999997641 1344555566666667777777764 333
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
..++-+|-.+ . |. .-+..+.-+.+
T Consensus 138 gSiltLtYlg---s------~r-----------------------------------------------~vPnYNvMGvA 161 (259)
T COG0623 138 GSILTLTYLG---S------ER-----------------------------------------------VVPNYNVMGVA 161 (259)
T ss_pred CcEEEEEecc---c------ee-----------------------------------------------ecCCCchhHHH
Confidence 4444444211 0 11 11335678899
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|+.-|.-++.. ..|+++..+-.|.|-.-... .+..+..++...-. ....+..+.++||.
T Consensus 162 KAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas-------gI~~f~~~l~~~e~---------~aPl~r~vt~eeVG 225 (259)
T COG0623 162 KAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS-------GIGDFRKMLKENEA---------NAPLRRNVTIEEVG 225 (259)
T ss_pred HHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh-------ccccHHHHHHHHHh---------hCCccCCCCHHHhh
Confidence 99999887754 56899998888776543331 22222233322111 11233446688999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.-..++.. -.+.-.+++.++.++
T Consensus 226 ~tA~fLlSd-LssgiTGei~yVD~G 249 (259)
T COG0623 226 NTAAFLLSD-LSSGITGEIIYVDSG 249 (259)
T ss_pred hhHHHHhcc-hhcccccceEEEcCC
Confidence 888887763 222223788888776
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-08 Score=85.09 Aligned_cols=114 Identities=20% Similarity=0.291 Sum_probs=80.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
..+|...+||||...+|++.++.|.++| ..|..+.-...+... +.+++ +.++.
T Consensus 6 s~kglvalvtggasglg~ataerlakqg---asv~lldlp~skg~~---vakel---------------------g~~~v 58 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKGAD---VAKEL---------------------GGKVV 58 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccchH---HHHHh---------------------CCceE
Confidence 4678889999999999999999999999 445677666554322 22222 57899
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC------c-------cccHHHHHHHhHHHHHHHHHHHH
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK------F-------DERYDVAFGINTLGVIHLVNFAK 149 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~------~-------~~~~~~~~~~n~~~~~~ll~~a~ 149 (399)
|...|+++++............+.+.|+.+||||..- + .++++..+++|+.|+.|++....
T Consensus 59 f~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 59 FTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred EeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 9999999864222112222233457999999999641 1 25567778889999999987643
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=3e-06 Score=82.98 Aligned_cols=124 Identities=16% Similarity=0.117 Sum_probs=85.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|.|+|++|.||+.++..|+..+. ...+..+.+.....++. .+.+ . .. ..
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~-~~elvL~Di~~~~g~a~-Dl~~---------------------~-~~--~~ 59 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPH-VSELSLYDIVGAPGVAA-DLSH---------------------I-DT--PA 59 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEecCCCccccc-chhh---------------------c-Cc--Cc
Confidence 4667999999999999999999886553 24667776622121111 1110 0 01 12
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
...+.+++ .+.. +.++++|+||++||...- .+.....+..|+..+.++++++++. +++++|+++|..+-.
T Consensus 60 ~v~~~td~------~~~~-~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 60 KVTGYADG------ELWE-KALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred eEEEecCC------CchH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 23344421 2212 667899999999998654 3567888999999999999999997 889999999976544
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.9e-07 Score=81.18 Aligned_cols=107 Identities=18% Similarity=0.075 Sum_probs=67.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++|||||||+|. +++.|++.| ++|.+..|+.+.. +.+...+ + ...++.++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~~~---~~l~~~l-------------~------~~~~i~~~~~ 54 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREVKL---ENVKRES-------------T------TPESITPLPL 54 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHHHH---HHHHHHh-------------h------cCCcEEEEEc
Confidence 68999999998876 999999999 4567777764322 2111111 0 0246888999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCc----eEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK----VFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~----~~v~~S 161 (399)
|+++++......+........+|++|+.+ +..+..++..+|++. +++ +|+|+=
T Consensus 55 Dv~d~~sv~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 55 DYHDDDALKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 99965431111111111123577888653 345677899999986 677 888855
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.4e-06 Score=82.65 Aligned_cols=183 Identities=18% Similarity=0.090 Sum_probs=112.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|.|||++|.||+.++..|...+. +.++.++.+.....+..+ +.+ .......
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~el~L~Di~~~~g~a~D-l~~------------------------~~~~~~i 71 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPL-VSELHLYDIANTPGVAAD-VSH------------------------INTPAQV 71 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-CCEEEEEecCCCCeeEch-hhh------------------------CCcCceE
Confidence 36899999999999999999986553 246677766552211111 110 0001122
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+++. +.+.. ..+.++|+|||+||.... .+.....+..|...+.++.+.+.+. ....+++++|-=+-+...
T Consensus 72 ~~~~~------~~d~~-~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~ 143 (323)
T PLN00106 72 RGFLG------DDQLG-DALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVP 143 (323)
T ss_pred EEEeC------CCCHH-HHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHH
Confidence 23221 22333 668899999999998654 3567888999999999999999997 678888888763321100
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCC
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~ 248 (399)
.... .. .+ ....++...||.++...+++-... ..+
T Consensus 144 -i~t~----------------~~--------------------~~------~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 144 -IAAE----------------VL--------------------KK------AGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred -HHHH----------------HH--------------------HH------cCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 0000 00 00 011233456888888887776655 567
Q ss_pred CcEEEEecCceecCCC-CCCCCcc
Q 015874 249 LSLVIIRPTVVSGTYK-EPFPGWV 271 (399)
Q Consensus 249 ~~~~i~Rp~~V~G~~~-~~~~~~~ 271 (399)
++...++...+.+.+. ..++.|.
T Consensus 181 v~~~~V~~~ViGeHg~~s~vp~~S 204 (323)
T PLN00106 181 LDPADVDVPVVGGHAGITILPLLS 204 (323)
T ss_pred CChhheEEEEEEeCCCccEeeehh
Confidence 8888887555555434 3344444
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-06 Score=81.65 Aligned_cols=35 Identities=14% Similarity=0.383 Sum_probs=29.4
Q ss_pred cCCcEEEEecCc----------------chhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 10 LENKTILVSGVT----------------GFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 10 ~~~~~IlVTGat----------------G~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
++||+||||+|. ||+|++|++.|+++|++| +++.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V---~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHV---IYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeE---EEEeC
Confidence 479999999885 999999999999999654 55544
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.1e-05 Score=76.23 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=56.8
Q ss_pred CCcEEEEecCcchhHHH--HHHHHHHhCCCcCeEEEEEecCCccc---------HHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 11 ENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDS---------AALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~--l~~~Ll~~g~~V~~v~~~~R~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
.+|++|||||++.+|.+ +++.| ++|.+ +.++.+...... ..+.+.+.+ +.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~---Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a----------~~----- 100 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGAD---TLGVFFEKPGTEKKTGTAGWYNSAAFDKFA----------KA----- 100 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCe---EEEEecCcchhhhcccccccchHHHHHHHH----------Hh-----
Confidence 35899999999999999 89999 88944 455654321110 011111111 11
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
.+..+..+.+|+++++......+.+.+.+.++|++||++|..
T Consensus 101 ---~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 101 ---AGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred ---cCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 123567789999976542222333333445799999999976
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=79.49 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=70.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCC----CcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~----~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+|+||||+|+||++++..|+..+- .-..+..+.|..... .++...-++ .+-.
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl---------------------~d~~ 59 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMEL---------------------QDCA 59 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeeh---------------------hhcc
Confidence 35799999999999999999987541 113678887754321 000000000 0000
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
....+|+. ......+.++++|+|||+||.... .+.....++.|+.-...+.+.+.++
T Consensus 60 ~~~~~~~~-------~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 60 FPLLKSVV-------ATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ccccCCce-------ecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 01122332 112222567899999999998754 3556788999999999999988886
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.2e-05 Score=73.38 Aligned_cols=95 Identities=15% Similarity=0.170 Sum_probs=55.6
Q ss_pred cCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCCCCC
Q 015874 19 GVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSED 98 (399)
Q Consensus 19 GatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 98 (399)
.+|||+|++|+++|+++| ++|+++.|...... ....++.++..+..+.
T Consensus 23 ~SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~~----------------------------~~~~~v~~i~v~s~~~- 70 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAG---HEVTLVTTKTAVKP----------------------------EPHPNLSIIEIENVDD- 70 (229)
T ss_pred ccchHHHHHHHHHHHhCC---CEEEEEECcccccC----------------------------CCCCCeEEEEEecHHH-
Confidence 458999999999999999 45577776532110 0013455555432210
Q ss_pred CCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHh
Q 015874 99 LGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 99 ~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
..+.....++++|+|||+||...+... ...-..++..+.++.+++++
T Consensus 71 ----m~~~l~~~~~~~DivIh~AAvsd~~~~-~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 71 ----LLETLEPLVKDHDVLIHSMAVSDYTPV-YMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred ----HHHHHHHHhcCCCEEEeCCccCCceeh-hhhhhhhhhhhhhhhhhhcc
Confidence 123333456689999999998764321 11122345555666666654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.3e-05 Score=77.07 Aligned_cols=78 Identities=22% Similarity=0.264 Sum_probs=62.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+|.|| |+||+.++..|+++|. .+|++.+|+.++...+... ...+++.++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~~i~~~------------------------~~~~v~~~~ 53 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCARIAEL------------------------IGGKVEALQ 53 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHHHHHhh------------------------ccccceeEE
Confidence 478999998 9999999999999885 6789999998765332111 124899999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
.|+. +.+.+.+++++.|+|||++..
T Consensus 54 vD~~-------d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 54 VDAA-------DVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred eccc-------ChHHHHHHHhcCCEEEEeCCc
Confidence 9999 566666888999999999876
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00045 Score=67.89 Aligned_cols=173 Identities=13% Similarity=0.027 Sum_probs=105.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCC----CcCeEEEEEecCCc--cc--HHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADI--DS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~----~V~~v~~~~R~~~~--~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
.++|.|+||+|.||++++..|+..+- ....+..+.+.+.. .. +++ +.+ ......
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~D-l~~-----------------~~~~~~ 63 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAME-LED-----------------CAFPLL 63 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehh-hhh-----------------cccccc
Confidence 46899999999999999999987653 11256777664332 21 111 100 000000
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEe
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVS 161 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~S 161 (399)
.++... . .+ ...++++|+||.+||...-+ +.....++.|+.-...+.+.+.+..+ ...++.+|
T Consensus 64 -~~~~i~-~-----------~~--~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (322)
T cd01338 64 -AEIVIT-D-----------DP--NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG 128 (322)
T ss_pred -CceEEe-c-----------Cc--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Confidence 112211 1 11 15568999999999986533 56677899999999999999988632 33344444
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
- |.|.-.. + +.|.-| ..++...|+.++...+++
T Consensus 129 -N-------------------PvD~~t~--~--------------------~~k~sg-----~~p~~~ViG~t~LDs~Rl 161 (322)
T cd01338 129 -N-------------------PCNTNAL--I--------------------AMKNAP-----DIPPDNFTAMTRLDHNRA 161 (322)
T ss_pred -C-------------------cHHHHHH--H--------------------HHHHcC-----CCChHheEEehHHHHHHH
Confidence 1 1111000 0 001000 012345688899999998
Q ss_pred HHHh--hCCCcEEEEecCceecCCC
Q 015874 242 MQQS--KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 242 l~~~--~~~~~~~i~Rp~~V~G~~~ 264 (399)
.... ..+++...+|..+|||++.
T Consensus 162 ~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 162 KSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHHHHHhCcChhHeEEEEEEeCCc
Confidence 8876 5688999999989999875
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00031 Score=68.78 Aligned_cols=117 Identities=17% Similarity=0.163 Sum_probs=75.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|+|+||||.||++++..|.......+.+.++.|.+. .... ..+.+ ......+.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~-----------------------~~~~~~i~ 56 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSH-----------------------IPTAVKIK 56 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceehhhhc-----------------------CCCCceEE
Confidence 68999999999999999988553223355667666532 1110 00000 01011122
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
+ .. ..+.. ..++++|+||.++|...- .+.....+..|...+.++++.+.+. +.+.++.+.|-
T Consensus 57 ~-~~-------~~d~~-~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 57 G-FS-------GEDPT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred E-eC-------CCCHH-HHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 2 00 11222 455789999999998653 3456777999999999999999997 67777777754
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=9.2e-05 Score=72.92 Aligned_cols=41 Identities=24% Similarity=0.280 Sum_probs=33.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.+++|+||||+|+||+.++++|++++ .+.++....|+..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~ 192 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQE 192 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHH
Confidence 5788999999999999999999998642 2356788877643
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.67 E-value=8e-05 Score=75.19 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=53.6
Q ss_pred hcCCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHH
Q 015874 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72 (399)
Q Consensus 9 ~~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~ 72 (399)
.++||+|+|||| +|.+|.++++.|.++| .+|+++.++.... .
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~~~~-~------------------ 242 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPVNLP-T------------------ 242 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCcccc-C------------------
Confidence 478999999999 9999999999999999 5557776654210 0
Q ss_pred hhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc
Q 015874 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF 126 (399)
Q Consensus 73 ~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~ 126 (399)
... ....|+++.+. ..+.....+.++|++||+||...+
T Consensus 243 -----------~~~--~~~~dv~~~~~---~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 243 -----------PAG--VKRIDVESAQE---MLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred -----------CCC--cEEEccCCHHH---HHHHHHHhcCCCCEEEEccccccc
Confidence 011 23457775221 122222234579999999998654
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00023 Score=64.64 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=54.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++++++|+||+|.+|+.+++.|.+.| .+|.+..|+.++. +.+.+.+ .+. .+..
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~~~~---~~l~~~l---------~~~----------~~~~ 79 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDLERA---QKAADSL---------RAR----------FGEG 79 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHH---------Hhh----------cCCc
Confidence 4678999999999999999999999988 5668888875332 2222111 000 1233
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
....|.. +.+.......++|+||++.+.
T Consensus 80 ~~~~~~~-------~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 80 VGAVETS-------DDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred EEEeeCC-------CHHHHHHHHhcCCEEEECCCC
Confidence 4445665 333334667889999997664
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00073 Score=66.44 Aligned_cols=113 Identities=14% Similarity=0.040 Sum_probs=72.1
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCC----cCeEEEEEecC--CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPN----VKKLYLFVRAA--DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~----V~~v~~~~R~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+|.||||+|.||++++..|+..+.- ...+..+.+.+ +..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------------------------- 46 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------------------------- 46 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-----------------------------------
Confidence 6999999999999999988875521 01366666654 221
Q ss_pred EEEeccCCCCCCC-CC---chhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEEe
Q 015874 88 TFVPGDISSEDLG-LK---DSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVS 161 (399)
Q Consensus 88 ~~~~gDl~~~~~~-~~---~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~-~~~~~v~~S 161 (399)
.....|+.+.... +. ......+.++++|+|||+||...-+ +.....+..|+.-...+...+.++. +...++.+|
T Consensus 47 ~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 47 EGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred ceeeeehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 1223333332100 00 0011236678999999999986543 5677789999999999999998862 333344443
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=56.79 Aligned_cols=117 Identities=14% Similarity=0.121 Sum_probs=75.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+||+|.+|++++..|+..+. +.++..+.+.+++.+. ..-++ -+ .. .....+.....+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~~~~g---~a~Dl-----~~-~~--------~~~~~~~~i~~~ 62 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINEDKAEG---EALDL-----SH-AS--------APLPSPVRITSG 62 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHHHHHH---HHHHH-----HH-HH--------HGSTEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCccccee---eehhh-----hh-hh--------hhcccccccccc
Confidence 6899999999999999999988753 3677888776543321 11111 00 00 011122333322
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
| . +.++++|+||-+||...- .+...++++.|..-...+.+.+.++.....++.+|
T Consensus 63 ~----------~----~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 63 D----------Y----EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp S----------G----GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred c----------c----cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 2 1 335799999999998643 35677889999999999999998873323344443
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.001 Score=65.50 Aligned_cols=114 Identities=13% Similarity=0.072 Sum_probs=72.4
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCC----cCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPN----VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~----V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+|.|+||+|.+|++++..|...+-- -..+..+.+.+... +...
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------------------------~a~g 47 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------------------------VLEG 47 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------------------------ccce
Confidence 5899999999999999999875420 01466666644321 1122
Q ss_pred EeccCCCCCCCC-C----chhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEEe
Q 015874 90 VPGDISSEDLGL-K----DSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~-~----~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~-~~~~~v~~S 161 (399)
...|+.+....+ . ..+. ...+.++|+|||+||...-. +.....+..|+.-.+.+.+.+.+.. +...++.+|
T Consensus 48 ~~~Dl~d~~~~~~~~~~~~~~~-~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 48 VVMELMDCAFPLLDGVVPTHDP-AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred eEeehhcccchhcCceeccCCh-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 233444332100 0 0021 25678999999999986543 4578889999999999999998862 333444444
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0014 Score=64.74 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=34.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++|+|.||||++|..|++.|.+++|.+.++..++|....
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~ 40 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA 40 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence 4789999999999999999999988877788888877543
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0032 Score=59.87 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=31.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
|+|||+||||. |+.|++.|.++| +.|.+.+|+....
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~ 36 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGK 36 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCcc
Confidence 68999999999 999999999999 5568888887644
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0019 Score=62.54 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=54.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++++|+|| |.+|++++..|.+.|. .+|+++.|+....+.++.+.+++ .+. ...+.+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~l---------~~~---------~~~~~~ 182 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEKI---------KQE---------VPECIV 182 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHHH---------hhc---------CCCcee
Confidence 56789999998 8999999999999994 34788888763222222222211 000 123444
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
...|+.+ .+.......++|+|||+-..
T Consensus 183 ~~~d~~~-------~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 183 NVYDLND-------TEKLKAEIASSDILVNATLV 209 (289)
T ss_pred EEechhh-------hhHHHhhhccCCEEEEeCCC
Confidence 5567663 33333455678999997654
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00078 Score=67.80 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=53.6
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|.|| |++|+.+++.|++.+.. .+|.+..|+.++.+.. .+. ....++.+++.|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~-~~v~va~r~~~~~~~~---~~~--------------------~~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPF-EEVTVADRNPEKAERL---AEK--------------------LLGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE--EEEEEESSHHHHHHH---HT----------------------TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCC-CcEEEEECCHHHHHHH---Hhh--------------------ccccceeEEEEec
Confidence 789999 99999999999987632 2778888886543221 110 0247899999999
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
. +.+.+.+++++.|+|||+++..
T Consensus 56 ~-------~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 56 N-------DPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp T-------THHHHHHHHTTSSEEEE-SSGG
T ss_pred C-------CHHHHHHHHhcCCEEEECCccc
Confidence 9 4555668899999999999874
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0016 Score=58.82 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=47.0
Q ss_pred cCCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 015874 10 LENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKE 73 (399)
Q Consensus 10 ~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~ 73 (399)
++||+||||+| ||-.|.+|++.+..+|+ .|+.+.....-.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga---~V~li~g~~~~~--------------------- 56 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA---EVTLIHGPSSLP--------------------- 56 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC---EEEEEecCcccc---------------------
Confidence 57899999987 67899999999999995 456665553211
Q ss_pred hhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc
Q 015874 74 KWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD 127 (399)
Q Consensus 74 ~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~ 127 (399)
.+..+..+...-... -.+.....+.+.|++||+||...|.
T Consensus 57 ---------~p~~~~~i~v~sa~e-----m~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 57 ---------PPPGVKVIRVESAEE-----MLEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp -----------TTEEEEE-SSHHH-----HHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred ---------ccccceEEEecchhh-----hhhhhccccCcceeEEEecchhhee
Confidence 024666665543210 2233334556789999999998764
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.002 Score=53.98 Aligned_cols=35 Identities=17% Similarity=0.455 Sum_probs=28.5
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
||.|.||||++|+.|++.|.+ .+++..+.+..|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeecc
Confidence 689999999999999988887 77765566666665
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0064 Score=59.45 Aligned_cols=118 Identities=13% Similarity=0.041 Sum_probs=72.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC--CcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA--DIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~--~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+|.|+||||++|.+++..|+..|.. ..|.++.|.. ++..... .+.+.+ .. .+....+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~~~~~l~~~~~dl~d~~---------~~---------~~~~~~i 61 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDIYDAL---------AA---------AGIDAEI 61 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcccccccccccchhhhch---------hc---------cCCCcEE
Confidence 68999999999999999999998743 3578888844 2221110 000000 00 0001111
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
. .+ .+ . ..+.++|+||-+++...-+ ......++.|+.-...+.+.+.+..+-..++.+++
T Consensus 62 ~---~~--------~d-~-~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 62 K---IS--------SD-L-SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred E---EC--------CC-H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 0 01 12 2 3478999999999976543 34567788899999999998887533334555553
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.00065 Score=63.45 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=20.8
Q ss_pred cCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 19 GVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 19 GatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.++|+||.++++.|+++|++ |.+..|
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~---Vvlv~~ 47 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHE---VTLVTT 47 (227)
T ss_pred CcccHHHHHHHHHHHHCCCE---EEEEcC
Confidence 34899999999999999955 455554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0026 Score=64.13 Aligned_cols=102 Identities=17% Similarity=0.275 Sum_probs=63.6
Q ss_pred hcCCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHH
Q 015874 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72 (399)
Q Consensus 9 ~~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~ 72 (399)
.++|++|+|||| ||.+|.++++.|..+|. +|+++.++....
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga---~V~~~~g~~~~~-------------------- 238 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA---DVTLITGPVSLL-------------------- 238 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC---EEEEeCCCCccC--------------------
Confidence 378999999999 46799999999999994 456665543211
Q ss_pred hhhcccccccccCceEEEeccCCCCCCCCCchhhHH----HHhcCccEEEEcccccCccc---------cHHHHHHHhHH
Q 015874 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKE----ELWNELDIMVNSAAITKFDE---------RYDVAFGINTL 139 (399)
Q Consensus 73 ~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~----~~~~~~D~Vih~Aa~~~~~~---------~~~~~~~~n~~ 139 (399)
....+ ...|+.+ ..++.+ ....++|++|++||...+.. .....+..|+.
T Consensus 239 ----------~~~~~--~~~~v~~------~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~ 300 (390)
T TIGR00521 239 ----------TPPGV--KSIKVST------AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLV 300 (390)
T ss_pred ----------CCCCc--EEEEecc------HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEE
Confidence 01122 3456664 233322 23356899999999876521 00112334566
Q ss_pred HHHHHHHHHHhc
Q 015874 140 GVIHLVNFAKKC 151 (399)
Q Consensus 140 ~~~~ll~~a~~~ 151 (399)
.+-.+++.+++.
T Consensus 301 ~~pdil~~l~~~ 312 (390)
T TIGR00521 301 KNPDIIAEVRKI 312 (390)
T ss_pred eCcHHHHHHHhh
Confidence 666777766653
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.027 Score=55.41 Aligned_cols=108 Identities=12% Similarity=0.052 Sum_probs=68.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcC-----eEEEEEecCCc--ccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADI--DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~-----~v~~~~R~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
..+|.|+||+|++|++++..|+..+. +. .+..+.+.+.. .... .-++ .+. .... .
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~---a~Dl-----~~~--------~~~~-~ 64 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGV---AMEL-----EDC--------AFPL-L 64 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchH---HHHH-----hhc--------cccc-c
Confidence 45899999999999999999987652 12 56666664322 2111 1011 000 0000 0
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.++... + +. ...++++|+||.+||...- .+.....+..|+.-...+.+.+.++
T Consensus 65 ~~~~i~-~------------~~-~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 65 AGVVAT-T------------DP-EEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred CCcEEe-c------------Ch-HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 111111 1 11 1556899999999998643 3567788999999999999999886
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=55.58 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=72.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|.|.|+ |.+|+.++..|+..|.. ..+.++.|..++.+.. ..++.. .. ...........+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~~~---a~dL~~------~~--------~~~~~~~~i~~~ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAEGE---ALDLED------AL--------AFLPSPVKIKAG 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhHh---HhhHHH------Hh--------hccCCCeEEEcC
Confidence 47999995 99999999999988742 3578888876554322 111100 00 000111222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ . ..+.++|+||.+++...-+ +.....++.|..-...+.+.+.+......++.+|
T Consensus 62 ----------~---~-~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 62 ----------D---Y-SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred ----------C---H-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 1 1 2357999999999986433 4567788999999999999998863333444444
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0054 Score=59.92 Aligned_cols=86 Identities=20% Similarity=0.322 Sum_probs=60.2
Q ss_pred EEEEecCcchhHHHHHHHHHH----hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 14 TILVSGVTGFVAKVFIEKILR----VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~----~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.++|.|||||-|..+++.++. .+ ..+.+..|++.+.+.. +.++.+.-+.. .+..+ .
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~---~slavAGRn~~KL~~v------------L~~~~~k~~~~----ls~~~-i 66 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEG---LSLAVAGRNEKKLQEV------------LEKVGEKTGTD----LSSSV-I 66 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccC---ceEEEecCCHHHHHHH------------HHHHhhccCCC----cccce-E
Confidence 589999999999999999998 44 4556677877654222 22222222221 23444 7
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF 126 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~ 126 (399)
+.+|.. +++.+.+...++.+|+||+|...+
T Consensus 67 ~i~D~~-------n~~Sl~emak~~~vivN~vGPyR~ 96 (423)
T KOG2733|consen 67 LIADSA-------NEASLDEMAKQARVIVNCVGPYRF 96 (423)
T ss_pred EEecCC-------CHHHHHHHHhhhEEEEecccccee
Confidence 789999 566676888899999999998654
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.01 Score=60.87 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=51.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+|+|+++ +|..+++.|++.|+ .|++..+.... ..++..+++ . ..++.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~---~V~~~d~~~~~--~~~~~~~~l---------~-----------~~~~~~ 56 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGA---KVILTDEKEED--QLKEALEEL---------G-----------ELGIEL 56 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCC---EEEEEeCCchH--HHHHHHHHH---------H-----------hcCCEE
Confidence 5789999999888 99999999999994 45776664321 111111111 0 134667
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
+.+|..+ ....++|+||++++..
T Consensus 57 ~~~~~~~------------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 57 VLGEYPE------------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred EeCCcch------------hHhhcCCEEEECCCCC
Confidence 7777662 2345799999999864
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.026 Score=55.39 Aligned_cols=116 Identities=12% Similarity=0.092 Sum_probs=73.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.+++|.|+|+ |.+|++++..|+..|- +..+..+.+..+...... .+.+ ..... .++..
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~~~g~~~Dl~~------------------~~~~~-~~~~i 63 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEKAEGDAMDLSH------------------AVPFT-SPTKI 63 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCchhHHHHHHHHh------------------hcccc-CCeEE
Confidence 4579999998 9999999999988763 246777777665432221 1111 00001 12222
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
..+ + . +.++++|+||-+||...- .+.....++.|..-...+++.+.++.....++.+|
T Consensus 64 ~~~------------~-~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 64 YAG------------D-Y-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EeC------------C-H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 211 1 1 346899999999998643 35667889999999999999888863323344333
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0087 Score=51.13 Aligned_cols=41 Identities=22% Similarity=0.313 Sum_probs=34.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+++++|+|.|+ |.+|+.++..|.+.|. .+|++..|+.++
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~~r 48 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTPER 48 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSHHH
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCHHH
Confidence 4688999999996 8899999999999985 458999998654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.024 Score=55.48 Aligned_cols=116 Identities=18% Similarity=0.112 Sum_probs=71.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|++|.+|++++..|+..+. +.++.++.+..-...+.+ +.+ .. ........
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~~a~g~alD-L~~---------------------~~-~~~~i~~~ 56 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIVNTPGVAAD-LSH---------------------IN-TPAKVTGY 56 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecCccceeehH-hHh---------------------CC-CcceEEEe
Confidence 5899999999999999999887663 245666655411111111 110 00 00111110
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. . +.+.. ..++++|+||-+||...- .+.....++.|..-...+.+.+.++.+-..++.+|
T Consensus 57 ~-~-------~~~~y-~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt 117 (310)
T cd01337 57 L-G-------PEELK-KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS 117 (310)
T ss_pred c-C-------CCchH-HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 0 0 11112 557899999999998643 35677889999999999999998863333444443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.01 Score=58.84 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=31.6
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+|.|.||||++|..|++.|.+++|.+..+..+.+....
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~ 38 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSA 38 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC
Confidence 48999999999999999999888887777777666543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=58.62 Aligned_cols=39 Identities=18% Similarity=0.317 Sum_probs=30.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|+|.|.||||++|..|++.|.+. +. .++..++++..
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~s 74 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADRK 74 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChhh
Confidence 34569999999999999999988775 33 57788877543
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.042 Score=54.17 Aligned_cols=117 Identities=9% Similarity=0.010 Sum_probs=72.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcC-----eEEEEEecCCc--cc--HHHHHHHHHhhhhhHHHHHhhhcccccc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLFVRAADI--DS--AALRFQNEVLAKDVFNVLKEKWGTRLNS 81 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~-----~v~~~~R~~~~--~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (399)
+.++|.|+||+|.+|++++..|+..+- +. .+..+.+.++. .. +++ +.+. . ..
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~D-l~~~---------~--------~~ 63 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVME-LDDC---------A--------FP 63 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehh-hhhh---------h--------hh
Confidence 346899999999999999999887552 12 56666664332 11 111 1100 0 00
Q ss_pred cccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccC-CceEEE
Q 015874 82 FISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVH 159 (399)
Q Consensus 82 ~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~ 159 (399)
. ..++.+. . .+ .+.++++|+||-+||...- .+....++..|+.-...+.+.+.++.+ ...++.
T Consensus 64 ~-~~~~~i~-~-----------~~--y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiiv 128 (326)
T PRK05442 64 L-LAGVVIT-D-----------DP--NVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLV 128 (326)
T ss_pred h-cCCcEEe-c-----------Ch--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 0 0112211 1 11 1456899999999997543 356788899999999999999988532 344444
Q ss_pred Ee
Q 015874 160 VS 161 (399)
Q Consensus 160 ~S 161 (399)
+|
T Consensus 129 vs 130 (326)
T PRK05442 129 VG 130 (326)
T ss_pred eC
Confidence 44
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=56.67 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=29.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
++|.|+||||++|..|++.|.++++.+.++..+..+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS 40 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence 689999999999999999999877776666666433
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.079 Score=52.51 Aligned_cols=131 Identities=17% Similarity=0.131 Sum_probs=72.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH----HHHHh-hhhhHHHHHhhhccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVL-AKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~----~~~l~-~~~~~~~~~~~~~~~~~~~ 82 (399)
+.+..++|+|.|+ |.+|++++..|.+.|. -++....++.-..+.+.|. .+++. .......+++..... +
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-n-- 93 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-N-- 93 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH-C--
Confidence 5677889999996 8999999999999984 3566665543221111100 00000 000111111111100 0
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
..-+++.+..+++ ..+ ...++.+.|+||.+... ...-..+-++|.+. .+++|+.|+
T Consensus 94 p~v~v~~~~~~~~-------~~~-~~~~~~~~DlVid~~Dn--------------~~~r~~ln~~~~~~--~iP~i~~~~ 149 (339)
T PRK07688 94 SDVRVEAIVQDVT-------AEE-LEELVTGVDLIIDATDN--------------FETRFIVNDAAQKY--GIPWIYGAC 149 (339)
T ss_pred CCcEEEEEeccCC-------HHH-HHHHHcCCCEEEEcCCC--------------HHHHHHHHHHHHHh--CCCEEEEee
Confidence 1234566666766 223 33667899999998542 22222345566663 367899888
Q ss_pred ceeecC
Q 015874 163 AYVAGE 168 (399)
Q Consensus 163 ~~v~~~ 168 (399)
.+.+|.
T Consensus 150 ~g~~G~ 155 (339)
T PRK07688 150 VGSYGL 155 (339)
T ss_pred eeeeeE
Confidence 888775
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.028 Score=55.74 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=30.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++|.|.||||++|..|++.|.+++|.+..+..+...
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 4689999999999999999998888776666666433
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.084 Score=48.16 Aligned_cols=133 Identities=11% Similarity=0.046 Sum_probs=70.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---H--HHHhhhhhHHHHHhhhccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---Q--NEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~--~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
+.+++.+|+|.|+.| +|+++++.|+..|- .+++.+..+.-....+.|. . ++-..+..-+.+++..-.. .
T Consensus 15 ~~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l---N 88 (198)
T cd01485 15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL---N 88 (198)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH---C
Confidence 557778999999777 99999999999884 4566654442211111100 0 0000111111111111000 0
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
..-+++.+..++.+ ..+.....+.++|+||.+-.. ......+-+.|.+. ..++++.++
T Consensus 89 p~v~i~~~~~~~~~------~~~~~~~~~~~~dvVi~~~d~--------------~~~~~~ln~~c~~~--~ip~i~~~~ 146 (198)
T cd01485 89 PNVKLSIVEEDSLS------NDSNIEEYLQKFTLVIATEEN--------------YERTAKVNDVCRKH--HIPFISCAT 146 (198)
T ss_pred CCCEEEEEeccccc------chhhHHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEe
Confidence 12345555555542 122334567889999976321 12233345667763 467999998
Q ss_pred ceeecC
Q 015874 163 AYVAGE 168 (399)
Q Consensus 163 ~~v~~~ 168 (399)
.+.+|.
T Consensus 147 ~G~~G~ 152 (198)
T cd01485 147 YGLIGY 152 (198)
T ss_pred ecCEEE
Confidence 888875
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.11 Score=49.10 Aligned_cols=130 Identities=14% Similarity=0.062 Sum_probs=69.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.|+ |.+|+.+++.|+..|- .++..+..+.-..+.+.|. ...-..+...+.++++..... ..
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln---p~ 101 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN---PH 101 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC---CC
Confidence 5577899999997 9999999999999883 4555554443222222111 000111122222222221110 12
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++ . +....++.++|+||.+... ...-..+-+++.+. .+++|+.++.+
T Consensus 102 v~i~~~~~~i~-------~-~~~~~~~~~~DiVi~~~D~--------------~~~r~~ln~~~~~~--~ip~v~~~~~g 157 (245)
T PRK05690 102 IAIETINARLD-------D-DELAALIAGHDLVLDCTDN--------------VATRNQLNRACFAA--KKPLVSGAAIR 157 (245)
T ss_pred CEEEEEeccCC-------H-HHHHHHHhcCCEEEecCCC--------------HHHHHHHHHHHHHh--CCEEEEeeecc
Confidence 34555555444 2 2233667899999998642 11222344556663 46688766655
Q ss_pred eec
Q 015874 165 VAG 167 (399)
Q Consensus 165 v~~ 167 (399)
.+|
T Consensus 158 ~~G 160 (245)
T PRK05690 158 MEG 160 (245)
T ss_pred CCc
Confidence 544
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.056 Score=55.32 Aligned_cols=121 Identities=11% Similarity=0.063 Sum_probs=76.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHh-------CCCcCeEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRV-------QPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~-------g~~V~~v~~~~R~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
.+.+.-+|.|+|++|.+|.+++..|+.. +- +.++..+.+..++.+... .+.+.. .
T Consensus 96 ~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a~G~amDL~daa---------~------- 158 (444)
T PLN00112 96 SWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQALEGVAMELEDSL---------Y------- 158 (444)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchhHHHHHHHHHhh---------h-------
Confidence 4555578999999999999999999875 31 135666666665543221 111100 0
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHh-ccCCceE
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKK-CVKLKVF 157 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~-~~~~~~~ 157 (399)
.. ..++.+..+| . ..++++|+||-.||...-+ +....+++.|+.-...+.+.+.+ ..+-..+
T Consensus 159 -~~-~~~v~i~~~~-------------y-e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~iv 222 (444)
T PLN00112 159 -PL-LREVSIGIDP-------------Y-EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKV 222 (444)
T ss_pred -hh-cCceEEecCC-------------H-HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 00 0122221111 1 4568999999999986533 56777899999999999999988 4333445
Q ss_pred EEEe
Q 015874 158 VHVS 161 (399)
Q Consensus 158 v~~S 161 (399)
+.+|
T Consensus 223 IVVs 226 (444)
T PLN00112 223 IVVG 226 (444)
T ss_pred EEcC
Confidence 5454
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.067 Score=52.15 Aligned_cols=114 Identities=18% Similarity=0.129 Sum_probs=72.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++|.|+|| |.||+.++..|+..+.. ..+..+.+.++..+.. ..+.+. ....... ..+.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~a~DL~~~------------------~~~~~~~-~~i~ 59 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGVALDLSHA------------------AAPLGSD-VKIT 59 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccchhcchhhc------------------chhccCc-eEEe
Confidence 57999999 99999999999776643 3677777775443211 111100 0000111 1111
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
+| .+ . ..+++.|+|+-+||...-+ .....++..|..-+..+.+.+.++ ...-++.+
T Consensus 60 ~~----------~~-y-~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlV 116 (313)
T COG0039 60 GD----------GD-Y-EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLV 116 (313)
T ss_pred cC----------CC-h-hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEE
Confidence 21 11 1 4567999999999987654 467788999999999999999886 33444433
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.06 Score=52.72 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=70.0
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|.|+|++|.||++++..|+..+. +.++.++.+.+....+++ +.+ .. .........
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~a~D-L~~---------------------~~-~~~~i~~~~ 56 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGVAAD-LSH---------------------IP-TAASVKGFS 56 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEEEch-hhc---------------------CC-cCceEEEec
Confidence 589999999999999999887653 245666655542221211 110 00 001111000
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. +.+. ...++++|+||-+||....+ +.....+..|..-...+.+.+.++.+...++.+|
T Consensus 57 -~-------~~~~-~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 57 -G-------EEGL-ENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred -C-------CCch-HHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 0 0111 25678999999999986433 5667789999999999999888863333344444
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.14 Score=50.64 Aligned_cols=131 Identities=18% Similarity=0.119 Sum_probs=70.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH----HHHHh-hhhhHHHHHhhhccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVL-AKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~----~~~l~-~~~~~~~~~~~~~~~~~~~ 82 (399)
+.+++++|+|.|+ |.+|+++++.|.+.|. -++.+..++.-..+.+.|. .++.. .......++++.... .
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i---n 93 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI---N 93 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH---C
Confidence 5577899999995 6699999999999994 3456665553211111000 00000 000011111110000 0
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
..-+++.+..|++ .. ..+.+++++|+||.+... ...-..+-++|.+. ..++|+.+.
T Consensus 94 p~v~i~~~~~~~~-------~~-~~~~~~~~~DlVid~~D~--------------~~~r~~in~~~~~~--~ip~i~~~~ 149 (338)
T PRK12475 94 SEVEIVPVVTDVT-------VE-ELEELVKEVDLIIDATDN--------------FDTRLLINDLSQKY--NIPWIYGGC 149 (338)
T ss_pred CCcEEEEEeccCC-------HH-HHHHHhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc--CCCEEEEEe
Confidence 1245666777766 22 234667899999998632 11112233455553 456888887
Q ss_pred ceeecC
Q 015874 163 AYVAGE 168 (399)
Q Consensus 163 ~~v~~~ 168 (399)
.+.+|.
T Consensus 150 ~g~~G~ 155 (338)
T PRK12475 150 VGSYGV 155 (338)
T ss_pred cccEEE
Confidence 776664
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.23 Score=45.38 Aligned_cols=132 Identities=11% Similarity=0.043 Sum_probs=71.8
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHH---HHHhhhhhHHHHHhhhcccccccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
-+.+.+++|+|.| .|.+|+++++.|...|. .++....++.-..+.+.|.. ..-..+.....++++.... ..
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---np 89 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL---NS 89 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh---CC
Confidence 3567889999998 78899999999999984 45666655532222222110 0000111112222221111 01
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.-+++.+...+. . +.....+.++|+||.+... ...-..+-+.+.+. .+++|+.++.
T Consensus 90 ~v~i~~~~~~i~-------~-~~~~~~~~~~D~Vi~~~d~--------------~~~r~~l~~~~~~~--~ip~i~~~~~ 145 (202)
T TIGR02356 90 DIQVTALKERVT-------A-ENLELLINNVDLVLDCTDN--------------FATRYLINDACVAL--GTPLISAAVV 145 (202)
T ss_pred CCEEEEehhcCC-------H-HHHHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEec
Confidence 134444444444 2 2334667899999988643 11222345566663 4678888877
Q ss_pred eeecC
Q 015874 164 YVAGE 168 (399)
Q Consensus 164 ~v~~~ 168 (399)
+.+|.
T Consensus 146 g~~G~ 150 (202)
T TIGR02356 146 GFGGQ 150 (202)
T ss_pred cCeEE
Confidence 66664
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.14 Score=48.76 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=70.0
Q ss_pred EEEecCcchhHHHHHHHHHHhCC-CcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~-~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
|.|+||+|.+|..++..|+..|. .+..+....+.+++.... ..++ +..... . ....+..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~---~~dl------~~~~~~--------~-~~~~i~~-- 60 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGV---AMDL------QDAVEP--------L-ADIKVSI-- 60 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHH---HHHH------HHhhhh--------c-cCcEEEE--
Confidence 57899999999999999988662 234677777766443322 1111 000000 0 0111111
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ .+ ....+.++|+||-+++....+ .........|+.-...+.+.+.+..+...++..|
T Consensus 61 -~--------~d-~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 61 -T--------DD-PYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred -C--------Cc-hHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1 11 125568999999999876543 3445567789999999999998863333344443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.2 Score=45.61 Aligned_cols=130 Identities=15% Similarity=0.175 Sum_probs=68.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHH---HHHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR---FQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++++|+|.|+.| +|+++++.|+..|- .+++....+.-....+.| +..+-..+..-+.+++..... ...
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GV--g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l---Np~ 90 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGI--GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL---NPR 90 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCC--CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH---CCC
Confidence 557788999999666 99999999999983 445555433211110000 000001111111111111111 011
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...+.+ .....+.++|+||.+... ......+-++|.+. ..++++.++.+
T Consensus 91 v~i~~~~~~~~~---------~~~~~~~~~dvVi~~~~~--------------~~~~~~ln~~c~~~--~ip~i~~~~~G 145 (197)
T cd01492 91 VKVSVDTDDISE---------KPEEFFSQFDVVVATELS--------------RAELVKINELCRKL--GVKFYATGVHG 145 (197)
T ss_pred CEEEEEecCccc---------cHHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEecC
Confidence 345555444431 123557889999976432 12223344667763 35789988888
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
.+|.
T Consensus 146 ~~G~ 149 (197)
T cd01492 146 LFGF 149 (197)
T ss_pred CEEE
Confidence 7774
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.16 Score=49.70 Aligned_cols=117 Identities=15% Similarity=0.075 Sum_probs=71.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
-++|.|+|+ |.+|+.++..|+..+- ..++..+.+..+.... ...+|. + ...+... .....
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-~~el~LiD~~~~~~~g---~a~Dl~-----~---------~~~~~~~-~~v~~ 62 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-ADELVLVDVVEDKLKG---EAMDLQ-----H---------GSAFLKN-PKIEA 62 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHHHH---HHHHHH-----H---------hhccCCC-CEEEE
Confidence 368999996 9999999999887663 3466777665543321 111110 0 0000011 11211
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. .++ +.++++|+||-+||...-+ +....++..|+.-.+.+.+.+.++.....++.+|
T Consensus 63 ~-----------~dy--~~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 63 D-----------KDY--SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred C-----------CCH--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 0 111 2368999999999976533 4567789999999999999998863333444444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.22 Score=49.60 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=71.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++|.|+|+ |.+|++++..|+..+-- ..+..+...+++..... .+.+. ..+. ....+.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~-~el~LiDi~~~~~~g~a~DL~~~------------------~~~~-~~~~i~- 95 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLA-DELALVDVNPDKLRGEMLDLQHA------------------AAFL-PRTKIL- 95 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCCCchhhHHHHHHHhh------------------hhcC-CCCEEE-
Confidence 69999996 99999999999876632 45677766554432211 11100 0001 112121
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
++ .++ ..++++|+||-+||...- .+.....+..|+.-...+.+.+.+......++.+|
T Consensus 96 ~~----------~dy--~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 96 AS----------TDY--AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred eC----------CCH--HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 10 111 346899999999998643 24567778899999999999998863333444444
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.35 E-value=1.7 Score=38.31 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=25.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
-.+|+|-||-|-+|+++++.+.++++-|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV 30 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWV 30 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEE
Confidence 4589999999999999999999988655
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.098 Score=51.74 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=31.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+.++|.|.||||++|..|++.|.++.|.+.++..+..+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 56799999999999999999888866666677776544
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.27 Score=49.03 Aligned_cols=131 Identities=11% Similarity=-0.052 Sum_probs=70.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.|+ |.+|+.++..|...|- .++.....+.-..+.+.|. ...-..+...+.++++.... ...
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~---np~ 97 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGV--GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL---NPD 97 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH---CCC
Confidence 5678899999985 8899999999999884 4555554443111111110 00000111111112111111 012
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++ ..+. ..++.++|+||.+... ...-..+-++|.+ ..+++|+.++.+
T Consensus 98 v~v~~~~~~i~-------~~~~-~~~~~~~DvVvd~~d~--------------~~~r~~~n~~c~~--~~ip~v~~~~~g 153 (355)
T PRK05597 98 VKVTVSVRRLT-------WSNA-LDELRDADVILDGSDN--------------FDTRHLASWAAAR--LGIPHVWASILG 153 (355)
T ss_pred cEEEEEEeecC-------HHHH-HHHHhCCCEEEECCCC--------------HHHHHHHHHHHHH--cCCCEEEEEEec
Confidence 34555555555 2222 3667899999998643 1112223445666 346789888776
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
.+|.
T Consensus 154 ~~g~ 157 (355)
T PRK05597 154 FDAQ 157 (355)
T ss_pred CeEE
Confidence 6664
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.099 Score=53.54 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=29.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.|++|+|||++| +|.+.++.|++.|+ +|.+..+..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4689999999988 99999999999994 456665544
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.06 Score=52.51 Aligned_cols=35 Identities=11% Similarity=0.296 Sum_probs=29.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
|+|.|+| +|.+|+.++..|++.|+ .|++..|+++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~---~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGH---EVRLWDADPAA 37 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCC---eeEEEeCCHHH
Confidence 5899999 99999999999999994 56888887644
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.087 Score=58.64 Aligned_cols=160 Identities=17% Similarity=0.223 Sum_probs=105.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cH--HHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SA--ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
|..+|+||-|..|-.|+..|+.+|. .++...+|+--+. ++ ..|++. ..+.
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~------------------------~GVq 1822 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRR------------------------RGVQ 1822 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHh------------------------cCeE
Confidence 7899999999999999999999995 3456666764332 22 233332 2333
Q ss_pred E--EeccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-cc
Q 015874 89 F--VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-CV 152 (399)
Q Consensus 89 ~--~~gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~~ 152 (399)
. ---|++. ..... .+++ -+--|+|+|+.... +++++...+.-+.+|.||=+..++ +.
T Consensus 1823 V~vsT~nitt------~~ga~-~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~ 1895 (2376)
T KOG1202|consen 1823 VQVSTSNITT------AEGAR-GLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP 1895 (2376)
T ss_pred EEEecccchh------hhhHH-HHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc
Confidence 2 2335553 22222 3332 35789999987542 244555555567888898888777 35
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
..+.||..||.+.--... ..+.||
T Consensus 1896 ~LdyFv~FSSvscGRGN~--------------------------------------------------------GQtNYG 1919 (2376)
T KOG1202|consen 1896 ELDYFVVFSSVSCGRGNA--------------------------------------------------------GQTNYG 1919 (2376)
T ss_pred ccceEEEEEeecccCCCC--------------------------------------------------------cccccc
Confidence 678899999875322111 125699
Q ss_pred HhHHHHHHHHHHh-hCCCcEEEEecCceec
Q 015874 233 FTKTMGEMLMQQS-KENLSLVIIRPTVVSG 261 (399)
Q Consensus 233 ~sK~~~E~~l~~~-~~~~~~~i~Rp~~V~G 261 (399)
.+..+.|+++++. ..|++-+.+--|.|..
T Consensus 1920 ~aNS~MERiceqRr~~GfPG~AiQWGAIGD 1949 (2376)
T KOG1202|consen 1920 LANSAMERICEQRRHEGFPGTAIQWGAIGD 1949 (2376)
T ss_pred hhhHHHHHHHHHhhhcCCCcceeeeecccc
Confidence 9999999999887 6788888877666543
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.11 Score=51.45 Aligned_cols=35 Identities=11% Similarity=0.287 Sum_probs=27.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+++|+|.||||++|+.+++.|.+. +. .++.+++++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~-p~-~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH-PE-VEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEECc
Confidence 378999999999999999998864 33 456666654
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.27 Score=47.83 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=67.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|.|.|| |.+|..++..++..|.. .|.+..+.++...... . ++ .+... .........
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~~~~~~--~-dl-----~~~~~---------~~~~~~~i~- 60 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGVPQGKA--L-DI-----AEAAP---------VEGFDTKIT- 60 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCchhHHHH--H-HH-----Hhhhh---------hcCCCcEEE-
Confidence 378999998 99999999999887632 5677777554432110 0 00 00000 000001111
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
. ..++ +.+.++|+||.+++.... .....+.+..|+.-...+++.+.+..+...++.+
T Consensus 61 ~----------~~d~--~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~ 118 (307)
T PRK06223 61 G----------TNDY--EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVV 118 (307)
T ss_pred e----------CCCH--HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 0 0122 336799999999986542 2344566778888888888888775333334444
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.1 Score=51.91 Aligned_cols=31 Identities=13% Similarity=0.415 Sum_probs=24.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
|+|.|.||||++|..+++.|.+. +. .++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEE
Confidence 58999999999999999998853 34 355533
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.21 Score=50.31 Aligned_cols=122 Identities=12% Similarity=0.071 Sum_probs=72.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcC-----eEEEE--EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLF--VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~-----~v~~~--~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
++.+.-+|.|+||+|.+|.+++..|+..+-- . .++.+ .+..++.... .-+| .+-..
T Consensus 40 ~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~-~~~~ei~L~L~diD~~~~~a~g~---a~DL-----~d~a~-------- 102 (387)
T TIGR01757 40 SWKKTVNVAVSGAAGMISNHLLFMLASGEVF-GQDQPIALKLLGSERSKEALEGV---AMEL-----EDSLY-------- 102 (387)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccc-CCCCceEEEEeccCccchhhhHH---HHHH-----HHhhh--------
Confidence 4445568999999999999999999876621 1 12222 3333332211 1111 00000
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCC-ceEE
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKL-KVFV 158 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~-~~~v 158 (399)
.. ..++.+..+| . ..++++|+||-+||...-+ +.....+..|+.-...+.+.+.++.+. ..++
T Consensus 103 ~~-~~~v~i~~~~-------------y-~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~ivi 167 (387)
T TIGR01757 103 PL-LREVSIGIDP-------------Y-EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVL 167 (387)
T ss_pred hh-cCceEEecCC-------------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 00 0122222111 1 4568999999999986533 567778999999999999999885323 3444
Q ss_pred EEe
Q 015874 159 HVS 161 (399)
Q Consensus 159 ~~S 161 (399)
.+|
T Consensus 168 VVs 170 (387)
T TIGR01757 168 VVG 170 (387)
T ss_pred EcC
Confidence 444
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.34 Score=45.57 Aligned_cols=132 Identities=14% Similarity=0.036 Sum_probs=69.9
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhcccccccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
.+.+++.+|+|.| .|.+|+.++..|...|- .+++...++.-..+.+.|. ...-..+...+.++++.... ..
T Consensus 19 q~~L~~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i---np 92 (240)
T TIGR02355 19 QEALKASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI---NP 92 (240)
T ss_pred HHHHhCCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH---CC
Confidence 3567888999998 67799999999999883 4566655443322211110 00001111112122221111 01
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.-+++.+...++ .+...+++.+.|+||.+... ...-..+-++|.+ ..+++|+.++.
T Consensus 93 ~v~i~~~~~~i~--------~~~~~~~~~~~DlVvd~~D~--------------~~~r~~ln~~~~~--~~ip~v~~~~~ 148 (240)
T TIGR02355 93 HIAINPINAKLD--------DAELAALIAEHDIVVDCTDN--------------VEVRNQLNRQCFA--AKVPLVSGAAI 148 (240)
T ss_pred CcEEEEEeccCC--------HHHHHHHhhcCCEEEEcCCC--------------HHHHHHHHHHHHH--cCCCEEEEEec
Confidence 233444443333 22334667899999998643 1222234456666 34678887776
Q ss_pred eeecC
Q 015874 164 YVAGE 168 (399)
Q Consensus 164 ~v~~~ 168 (399)
+.+|.
T Consensus 149 g~~G~ 153 (240)
T TIGR02355 149 RMEGQ 153 (240)
T ss_pred ccEeE
Confidence 66553
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.32 Score=47.53 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=69.9
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccc-CceEEEe
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFIS-EKITFVP 91 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~ 91 (399)
+|.|.|+ |.+|+.++..|+..+- +.++..+...+++.... ..+.+ ...+.. .++....
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~a~g~a~DL~~------------------~~~~~~~~~~~i~~ 60 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGL-FSEIVLIDVNEGVAEGEALDFHH------------------ATALTYSTNTKIRA 60 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHHHHHHHh------------------hhccCCCCCEEEEE
Confidence 4789998 9999999999988653 24567776655443221 11110 000111 1233332
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-cc--HHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ER--YDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~--~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
+| . +.++++|+||-+||...-+ +. ....+..|..-...+.+.+.++ ...-++.
T Consensus 61 ~~-------------y-~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~i 116 (307)
T cd05290 61 GD-------------Y-DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVII 116 (307)
T ss_pred CC-------------H-HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 22 1 4568999999999986433 33 4777999999999999999886 3443333
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.64 Score=39.35 Aligned_cols=126 Identities=20% Similarity=0.225 Sum_probs=66.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHH--H-HHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F-QNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+|.| .|.+|+.+++.|...|. .++.......-..+-+.| + ..+-.....-..++..... -....++.
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~---~np~~~v~ 75 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQE---INPDVEVE 75 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHH---HSTTSEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHH---hcCceeee
Confidence 57899998 67799999999999995 345555443211110000 0 0000000111111111111 01134667
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
.+..++. .. ....+++++|+||.+... ......+-+.+++. .+++++.++.+.+|
T Consensus 76 ~~~~~~~-------~~-~~~~~~~~~d~vi~~~d~--------------~~~~~~l~~~~~~~--~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 76 AIPEKID-------EE-NIEELLKDYDIVIDCVDS--------------LAARLLLNEICREY--GIPFIDAGVNGFYG 130 (135)
T ss_dssp EEESHCS-------HH-HHHHHHHTSSEEEEESSS--------------HHHHHHHHHHHHHT--T-EEEEEEEETTEE
T ss_pred eeecccc-------cc-cccccccCCCEEEEecCC--------------HHHHHHHHHHHHHc--CCCEEEEEeecCEE
Confidence 7777764 33 334667899999997543 22233455667763 45788888776655
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.33 Score=47.37 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=66.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|.|.|+ |.+|..++..|+..|.- ..+.++.|+.+.... ...+.+ . .... .......
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~-~ev~l~D~~~~~~~g~a~dl~~-------------~-----~~~~-~~~~i~~ 59 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLA-SEIVLVDINKAKAEGEAMDLAH-------------G-----TPFV-KPVRIYA 59 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCC-CEEEEEECCchhhhhHHHHHHc-------------c-----cccc-CCeEEee
Confidence 57999997 99999999999988842 456777776654321 111110 0 0000 1111111
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+ ++ ...+++|+||-+++...- .......+..|+.-...+.+.+.+.
T Consensus 60 ~------------d~--~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 60 G------------DY--ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred C------------CH--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 346899999999997543 3456677888999999999988886
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.41 Score=47.00 Aligned_cols=118 Identities=17% Similarity=0.216 Sum_probs=69.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|+|| |.+|+.++..|+..|. ..+....++++..... .. ++ .+. ....+.....
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g~-~l--Dl-----------~~~---~~~~~~~~~i- 62 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQGK-AL--DL-----------KHF---STLVGSNINI- 62 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchhH-HH--HH-----------hhh---ccccCCCeEE-
Confidence 5679999997 9999999998887763 3567776665543211 11 00 000 0000011111
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+ + .+ . +.+.++|+||.+|+....+ ......+..|..-...+.+.+.+..+...++.+|
T Consensus 63 ~~--~--------~d-~-~~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 63 LG--T--------NN-Y-EDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred Ee--C--------CC-H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 11 0 12 2 3568999999999875432 4556678889888888888888762223345443
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.28 Score=50.34 Aligned_cols=53 Identities=8% Similarity=-0.042 Sum_probs=39.6
Q ss_pred HHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEe
Q 015874 109 ELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVS 161 (399)
Q Consensus 109 ~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~S 161 (399)
..++++|+||-.||...-+ +....+++.|..-...+.+.+.+... ..+++.+.
T Consensus 195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~ 249 (452)
T cd05295 195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAG 249 (452)
T ss_pred HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 5578999999999986433 56677899999999999999988633 13444443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.15 Score=50.76 Aligned_cols=36 Identities=17% Similarity=0.328 Sum_probs=27.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.++|.|+||||++|+.+++.|++ .+. .++..++++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~-~p~-~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLAN-HPW-FEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHc-CCC-ceEEEEEcCh
Confidence 37899999999999999998886 333 3666665554
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.079 Score=50.93 Aligned_cols=40 Identities=25% Similarity=0.376 Sum_probs=33.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.+++|+|+|+ |.+|++++..|...|. .+|++..|+.++.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~~~a 160 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTVERA 160 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCHHHH
Confidence 56789999996 9999999999998883 4678888886543
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.051 Score=52.85 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=51.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
..++|-|||||.|.-++++|..+|.+ ...-.|+..+ +.++...| +.+...+..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~~k---l~~l~~~L---------------------G~~~~~~p~ 59 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSSAK---LDALRASL---------------------GPEAAVFPL 59 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCc---hhhccCCHHH---HHHHHHhc---------------------CccccccCC
Confidence 46899999999999999999999943 3555566543 33333322 122222222
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccC
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~ 125 (399)
. ..+..++...+.++|+||+|...
T Consensus 60 ~---------~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 60 G---------VPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred C---------CHHHHHHHHhcceEEEecccccc
Confidence 2 35566677889999999999754
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.59 Score=43.49 Aligned_cols=132 Identities=17% Similarity=0.062 Sum_probs=69.0
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhcccccccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
-+.+.+++|+|.| .|.+|+++++.|...|. .++++...+.-..+.+.|. ..+-..+..-+.++++.... ..
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---np 89 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI---NP 89 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh---CC
Confidence 3567788999998 78899999999999884 3455443222111111000 00000111111111111110 01
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.-+++.+..+++ . +...+++.++|+||.+... ...-..+-++|.+. ..++|+.+..
T Consensus 90 ~~~i~~~~~~i~-------~-~~~~~~~~~~DvVi~~~d~--------------~~~r~~l~~~~~~~--~ip~i~~g~~ 145 (228)
T cd00757 90 DVEIEAYNERLD-------A-ENAEELIAGYDLVLDCTDN--------------FATRYLINDACVKL--GKPLVSGAVL 145 (228)
T ss_pred CCEEEEecceeC-------H-HHHHHHHhCCCEEEEcCCC--------------HHHHHHHHHHHHHc--CCCEEEEEec
Confidence 134555555554 2 2234667889999998653 11223355566663 3678888776
Q ss_pred eeecC
Q 015874 164 YVAGE 168 (399)
Q Consensus 164 ~v~~~ 168 (399)
+.+|.
T Consensus 146 g~~g~ 150 (228)
T cd00757 146 GFEGQ 150 (228)
T ss_pred cCEEE
Confidence 66553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.18 Score=50.01 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=28.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEec
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRA 48 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~ 48 (399)
++++|.|.||||++|+.+++.|.+ ....|.++..+...
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 347899999999999999998884 45555556655433
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.082 Score=54.16 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=49.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|+|+ |.+|+++++.|.+.|+ .|.++.|+.+.. +.+++ ...+.++.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~---~v~vid~~~~~~---~~~~~-----------------------~~~~~~~~g 50 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN---DVTVIDTDEERL---RRLQD-----------------------RLDVRTVVG 50 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---cEEEEECCHHHH---HHHHh-----------------------hcCEEEEEe
Confidence 58999997 9999999999999894 457776655432 11111 135778888
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
|.++ .+.++.. ..++|+||-+..
T Consensus 51 d~~~-------~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 51 NGSS-------PDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CCCC-------HHHHHHcCCCcCCEEEEecC
Confidence 8884 4444344 567888877653
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.34 Score=46.22 Aligned_cols=114 Identities=23% Similarity=0.262 Sum_probs=72.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
-++-+|.|.||.|.||+-|... ++..+.|..+....-.....
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLL-lK~np~Vs~LaLYDi~~~~G------------------------------------- 67 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLL-LKLNPLVSELALYDIANTPG------------------------------------- 67 (345)
T ss_pred cCcceEEEEecCCccCccHHHH-HhcCcccceeeeeecccCCc-------------------------------------
Confidence 3456899999999999998754 55677776554443222111
Q ss_pred EeccCCCCCC-----CCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 90 VPGDISSEDL-----GLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~-----~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+..|++..+. |..-.+-++....++|+||--||...-+ ...+.+|.+|..-.+.|..++.++-+.-.+..+|
T Consensus 68 VaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 68 VAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred ccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 1112211111 1112334557788999999999987644 4567889999999999999988852223344344
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.19 Score=56.64 Aligned_cols=80 Identities=18% Similarity=0.198 Sum_probs=51.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcC------------eEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVK------------KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~------------~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
.+++|+|.|| |+||+..++.|.+.. ++. .|.+..+.... ++++.+.
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~-~~~~~~~~~~~~~~~lV~VaD~~~~~---a~~la~~----------------- 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVK-TISYYGDDSEEPTDVHVIVASLYLKD---AKETVEG----------------- 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCc-CccccccccccccccEEEEECCCHHH---HHHHHHh-----------------
Confidence 3579999996 999999999998743 221 24444333322 2222211
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
..++..+..|++ +.+.+..+.+++|+||++....
T Consensus 626 -----~~~~~~v~lDv~-------D~e~L~~~v~~~DaVIsalP~~ 659 (1042)
T PLN02819 626 -----IENAEAVQLDVS-------DSESLLKYVSQVDVVISLLPAS 659 (1042)
T ss_pred -----cCCCceEEeecC-------CHHHHHHhhcCCCEEEECCCch
Confidence 135677889988 4454546667899999998753
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.81 Score=42.77 Aligned_cols=132 Identities=18% Similarity=0.105 Sum_probs=70.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH----HHHHhhhhhHHHHHhhhcccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF----QNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
+.+++.+|+|.| .|.+|++++..|...|. .++++...+.-..+.+.|. .+.+.+...-...+++... . ..
T Consensus 23 ~~L~~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~-~--np 96 (231)
T PRK08328 23 EKLKKAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER-F--NS 96 (231)
T ss_pred HHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH-h--CC
Confidence 457788999998 67789999999999884 4566664443222222110 0011000010111111000 0 01
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.-+++.+.+.++ ..+ ...++++.|+||.+... ...-..+-++|.+. ..++|+.++.
T Consensus 97 ~v~v~~~~~~~~-------~~~-~~~~l~~~D~Vid~~d~--------------~~~r~~l~~~~~~~--~ip~i~g~~~ 152 (231)
T PRK08328 97 DIKIETFVGRLS-------EEN-IDEVLKGVDVIVDCLDN--------------FETRYLLDDYAHKK--GIPLVHGAVE 152 (231)
T ss_pred CCEEEEEeccCC-------HHH-HHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEeec
Confidence 234555555554 222 34667899999997543 11112233456663 4678988888
Q ss_pred eeecCc
Q 015874 164 YVAGER 169 (399)
Q Consensus 164 ~v~~~~ 169 (399)
+.+|..
T Consensus 153 g~~G~v 158 (231)
T PRK08328 153 GTYGQV 158 (231)
T ss_pred cCEEEE
Confidence 877753
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.38 Score=45.69 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=23.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
++|.|+|++|.+|+.+++.+.+. .++ ++...+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~-elvav~ 33 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDL-ELVAAV 33 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEE
Confidence 68999999999999999887653 333 344433
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.71 Score=46.41 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=30.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+.+++++|+|.| .|.+|++++..|...|. .++..+.++
T Consensus 131 ~~l~~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 457788999997 57899999999999994 456666655
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.66 Score=44.77 Aligned_cols=133 Identities=14% Similarity=0.052 Sum_probs=69.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|+.++..|...|- -++.....+.-..+.+.|. ..+-..+...+.++++.-.. ...
T Consensus 23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i---NP~ 96 (287)
T PRK08223 23 QRLRNSRVAIAG-LGGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI---NPE 96 (287)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH---CCC
Confidence 567888999998 67789999999999984 3455544433222111110 00001112222222221111 112
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++. .+ ..+++.++|+||++.-.. ++..-..+-++|.+. .+.+|+.|..+
T Consensus 97 v~V~~~~~~l~~-------~n-~~~ll~~~DlVvD~~D~~------------~~~~r~~ln~~c~~~--~iP~V~~~~~g 154 (287)
T PRK08223 97 LEIRAFPEGIGK-------EN-ADAFLDGVDVYVDGLDFF------------EFDARRLVFAACQQR--GIPALTAAPLG 154 (287)
T ss_pred CEEEEEecccCc-------cC-HHHHHhCCCEEEECCCCC------------cHHHHHHHHHHHHHc--CCCEEEEeccC
Confidence 355666666652 22 336678999999664220 011222344566664 46788877655
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
..|.
T Consensus 155 ~~gq 158 (287)
T PRK08223 155 MGTA 158 (287)
T ss_pred CeEE
Confidence 4443
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.2 Score=42.03 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=26.5
Q ss_pred cEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~~ 49 (399)
|+|.|.|++|-+|+.+++.+.+ .+. .-+-++.|..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~--~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF--ELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE--EEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc--EEEEEEecCC
Confidence 5899999999999999999988 442 2244445554
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.57 Score=42.80 Aligned_cols=39 Identities=26% Similarity=0.263 Sum_probs=30.6
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+.++.++|+|.|+ |.+|+.++..|.+.|. ..++...++
T Consensus 16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D 54 (200)
T TIGR02354 16 VQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFD 54 (200)
T ss_pred HHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 46678899999995 7799999999999994 245655554
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.13 Score=53.05 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=27.6
Q ss_pred hcCCcEEEEecC----------------cchhHHHHHHHHHHhCCCc
Q 015874 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 9 ~~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V 39 (399)
.++||+||||+| ||-.|.+|++.+..+|.+|
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~V 299 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEV 299 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcE
Confidence 389999999987 6789999999999999665
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.63 Score=45.41 Aligned_cols=116 Identities=18% Similarity=0.178 Sum_probs=67.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|.|+ |++|..++..|+..|.- .|.+..+.++...... . +.++... .... .+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~g~a--~------d~~~~~~-----------~~~~---~~ 56 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQGKA--L------DMYEASP-----------VGGF---DT 56 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhHHHH--H------hhhhhhh-----------ccCC---Cc
Confidence 67999996 99999999999987742 4566666443221110 0 0010000 0000 01
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+.- ..++ +. ..++|+||-+|+...-+ +.....+..|..-...+++.+.+..+-..++.+|
T Consensus 57 ~i~~------t~d~-~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t 118 (305)
T TIGR01763 57 KVTG------TNNY-AD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118 (305)
T ss_pred EEEe------cCCH-HH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1110 0122 12 57899999999975432 3455678889999999999888763333444444
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.41 Score=44.56 Aligned_cols=75 Identities=23% Similarity=0.279 Sum_probs=51.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++|.| .|-+|..+++.|.++|++| .+..+..+.. .+..+ .....+.+.+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~V---v~Id~d~~~~---~~~~~----------------------~~~~~~~v~g 51 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNV---VLIDRDEERV---EEFLA----------------------DELDTHVVIG 51 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCce---EEEEcCHHHH---HHHhh----------------------hhcceEEEEe
Confidence 5788887 7888999999999999655 6665655432 11111 0146778899
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEcccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~ 123 (399)
|-+ +.+.++++ ..++|+++-.-+.
T Consensus 52 d~t-------~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 52 DAT-------DEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred cCC-------CHHHHHhcCCCcCCEEEEeeCC
Confidence 999 56666555 4689999976553
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.51 Score=47.75 Aligned_cols=131 Identities=15% Similarity=0.066 Sum_probs=69.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+.+.+|+|.| .|.+|+.++..|...|. .++.....+.-..+.+.|. ...-..+.....+++..-.. ...
T Consensus 38 ~~L~~~~VlviG-~GGlGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~---np~ 111 (392)
T PRK07878 38 KRLKNARVLVIG-AGGLGSPTLLYLAAAGV--GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI---NPL 111 (392)
T ss_pred HHHhcCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh---CCC
Confidence 456778999998 67799999999999884 3445443332111111110 00001111111111111110 012
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++. .+ ...++.++|+||.+... ...-..+-++|.+. .++||+.++.+
T Consensus 112 v~i~~~~~~i~~-------~~-~~~~~~~~D~Vvd~~d~--------------~~~r~~ln~~~~~~--~~p~v~~~~~g 167 (392)
T PRK07878 112 VNVRLHEFRLDP-------SN-AVELFSQYDLILDGTDN--------------FATRYLVNDAAVLA--GKPYVWGSIYR 167 (392)
T ss_pred cEEEEEeccCCh-------hH-HHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEecc
Confidence 345555555552 22 33667899999987532 21222244566663 46799988887
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
.+|.
T Consensus 168 ~~G~ 171 (392)
T PRK07878 168 FEGQ 171 (392)
T ss_pred CEEE
Confidence 7774
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.68 Score=45.54 Aligned_cols=118 Identities=16% Similarity=0.174 Sum_probs=69.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|.| +|.+|+.++..++..|. ..+....++++.... +.+. ..+. .........+.
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~~-~~ld-------~~~~---------~~~~~~~~~I~ 64 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQG-KALD-------ISHS---------NVIAGSNSKVI 64 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhhH-HHHH-------HHhh---------hhccCCCeEEE
Confidence 447899999 59999999999888774 246777766654321 1110 0000 00001111121
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-c-----cHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-E-----RYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~-----~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. + .++ +.+.++|+||.+|+....+ + +...++..|+.-...+.+.+.+..+...++..|
T Consensus 65 ~---~--------~d~--~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 65 G---T--------NNY--EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred E---C--------CCH--HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1 0 111 3458999999999875421 2 456677889888888888888762222455444
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.97 Score=42.29 Aligned_cols=38 Identities=32% Similarity=0.245 Sum_probs=29.4
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.+.+.+.+|+|.| .|.+|+++++.|++.|- -+++....
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~ 43 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDF 43 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECC
Confidence 3557788999998 77899999999999883 44555443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.16 Score=43.68 Aligned_cols=38 Identities=21% Similarity=0.365 Sum_probs=30.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++++|+|+|+ |.+|..+++.|.+.| ...|.+..|+.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCHH
Confidence 56789999997 999999999999875 255788877654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.16 Score=43.27 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=60.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++++|++.| +| -|.+++..|.+.|+ .|.++..++... +..++ ..+.++
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~---~ViaIDi~~~aV---~~a~~------------------------~~~~~v 63 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGF---DVIVIDINEKAV---EKAKK------------------------LGLNAF 63 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCC---EEEEEECCHHHH---HHHHH------------------------hCCeEE
Confidence 457899998 66 78899999999994 557776655422 22111 357899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.+|+.++++ .+-+++|.|+-.=.. .+ -...+++.+++. ++.-+|.
T Consensus 64 ~dDlf~p~~---------~~y~~a~liysirpp-------~e-------l~~~~~~la~~~-~~~~~i~ 108 (134)
T PRK04148 64 VDDLFNPNL---------EIYKNAKLIYSIRPP-------RD-------LQPFILELAKKI-NVPLIIK 108 (134)
T ss_pred ECcCCCCCH---------HHHhcCCEEEEeCCC-------HH-------HHHHHHHHHHHc-CCCEEEE
Confidence 999997642 456788998865221 11 234578888886 5554443
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.12 Score=51.30 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=29.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.-+|+.|||.||+|.+|++.++-+...+ ...+..+++.+.
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~---~~~v~t~~s~e~ 194 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG---AIKVVTACSKEK 194 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcC---CcEEEEEcccch
Confidence 45678899999999999999997776666 233444455544
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=1.1 Score=42.87 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=28.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
+.+.+.+|+|.| .|.+|+++++.|.+.|- .+++.+..
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~ 62 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDM 62 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeC
Confidence 557889999998 77899999999999883 34444443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=93.76 E-value=1.5 Score=37.29 Aligned_cols=124 Identities=17% Similarity=0.132 Sum_probs=64.6
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH--H-HHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF--Q-NEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~--~-~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|+|.|+ |.+|+.+++.|+..|. .++.......-..+.+.|. . .+-..+...+.+++...... ..-+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~---p~v~i~~~ 74 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN---PGVNVTAV 74 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC---CCcEEEEE
Confidence 4889985 8999999999999985 3455554332111111110 0 00011111122222211110 12345555
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
..++.+ ... ...+.+.|+||.+... ......+.++|++. ..+++..++.+..|
T Consensus 75 ~~~~~~-------~~~-~~~~~~~diVi~~~d~--------------~~~~~~l~~~~~~~--~i~~i~~~~~g~~g 127 (143)
T cd01483 75 PEGISE-------DNL-DDFLDGVDLVIDAIDN--------------IAVRRALNRACKEL--GIPVIDAGGLGLGG 127 (143)
T ss_pred eeecCh-------hhH-HHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEcCCCcEE
Confidence 555442 221 3667899999998653 22334456677774 46678777766444
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.4 Score=49.25 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=29.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.|+||+|.+|..++..|.+.|+ .|.+..|+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~---~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF---EVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC---EEEEEECChH
Confidence 5899999999999999999999994 5677777653
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.49 Score=51.47 Aligned_cols=124 Identities=15% Similarity=0.035 Sum_probs=67.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH--HHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF--QNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+.+++.+|+|.|+ | +|++++..|...|- |-+++....+.-..+.+.|+ ...-+...+...++.+.... +..-
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i---np~i 176 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL---DPYL 176 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH---CCCC
Confidence 4577899999999 8 99999999999882 01334433332222222221 00011122222222222211 1124
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHH-HHHHHhccCCceEEEEec
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHL-VNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~l-l~~a~~~~~~~~~v~~SS 162 (399)
+++.+...++ .+...++++++|+||.+.-. + .++.+ -++|.+ ..+.+|+.|+
T Consensus 177 ~v~~~~~~i~--------~~n~~~~l~~~DlVvD~~D~--------------~-~~R~~ln~~a~~--~~iP~i~~~~ 229 (722)
T PRK07877 177 PVEVFTDGLT--------EDNVDAFLDGLDVVVEECDS--------------L-DVKVLLREAARA--RRIPVLMATS 229 (722)
T ss_pred EEEEEeccCC--------HHHHHHHhcCCCEEEECCCC--------------H-HHHHHHHHHHHH--cCCCEEEEcC
Confidence 6666766666 23345778899999998532 2 23334 345666 3456776664
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.15 Score=49.89 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=30.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+++|.|.||||.+|+.+++.|.++++.+..+..+...
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~ 37 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA 37 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc
Confidence 4689999999999999999998888777656665443
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.11 Score=48.15 Aligned_cols=36 Identities=22% Similarity=0.177 Sum_probs=30.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
|+|.|+||+|.+|+.++..|.+.|+ +|.+..|+.++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~---~V~v~~r~~~~ 36 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN---KIIIGSRDLEK 36 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC---EEEEEEcCHHH
Confidence 5899999999999999999999994 55777776544
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.53 Score=48.18 Aligned_cols=76 Identities=17% Similarity=0.199 Sum_probs=50.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..++|+|.|+ |.+|+.+++.|.+.|+ .|.++.++++.. +++.+. ..++.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~---~v~vid~~~~~~---~~~~~~----------------------~~~~~~i 280 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGY---SVKLIERDPERA---EELAEE----------------------LPNTLVL 280 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHHH---HHHHHH----------------------CCCCeEE
Confidence 4588999997 9999999999999884 456666554322 222211 1356788
Q ss_pred eccCCCCCCCCCchhhHH-HHhcCccEEEEccc
Q 015874 91 PGDISSEDLGLKDSNLKE-ELWNELDIMVNSAA 122 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~-~~~~~~D~Vih~Aa 122 (399)
.||.++ .+.++ ....++|+||-+..
T Consensus 281 ~gd~~~-------~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 281 HGDGTD-------QELLEEEGIDEADAFIALTN 306 (453)
T ss_pred ECCCCC-------HHHHHhcCCccCCEEEECCC
Confidence 999994 33332 33457898886543
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.66 Score=46.90 Aligned_cols=131 Identities=14% Similarity=0.034 Sum_probs=69.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHH--H-HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR--F-QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|+.++..|...|- -++.....+.-..+.+.| + ...-..+..-..++++.... ...
T Consensus 34 ~~L~~~~VlivG-~GGlG~~va~~La~~Gv--g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~---np~ 107 (390)
T PRK07411 34 KRLKAASVLCIG-TGGLGSPLLLYLAAAGI--GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEI---NPY 107 (390)
T ss_pred HHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHH---CCC
Confidence 467788999998 66789999999999884 344444333211111111 0 00001111111222221111 112
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++. .+ ...++.++|+||.+... ...-..+-++|.+ ..+.+|+.+..+
T Consensus 108 v~v~~~~~~~~~-------~~-~~~~~~~~D~Vvd~~d~--------------~~~r~~ln~~~~~--~~~p~v~~~~~g 163 (390)
T PRK07411 108 CQVDLYETRLSS-------EN-ALDILAPYDVVVDGTDN--------------FPTRYLVNDACVL--LNKPNVYGSIFR 163 (390)
T ss_pred CeEEEEecccCH-------Hh-HHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHH--cCCCEEEEEEcc
Confidence 456666666662 22 33667899999998653 1112223345555 346788887777
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
-+|.
T Consensus 164 ~~g~ 167 (390)
T PRK07411 164 FEGQ 167 (390)
T ss_pred CEEE
Confidence 6664
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=93.40 E-value=1.5 Score=42.61 Aligned_cols=114 Identities=18% Similarity=0.116 Sum_probs=68.7
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|.|.|+ |.+|+.++..|+..|- +.++.++.+.+++... +..+|.. . .... .......+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~~~g---~~~DL~~-----~---------~~~~-~~~~i~~~-- 58 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEKAKG---DALDLSH-----A---------SAFL-ATGTIVRG-- 58 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHHHH---HHHhHHH-----h---------cccc-CCCeEEEC--
Confidence 467885 8899999998887662 2457777776554322 2111100 0 0000 11111111
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. + . ..+.++|+||.+|+...- .++....+..|+.-...+.+.+.+..+...++.+|
T Consensus 59 ~-------~---~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 59 G-------D---Y-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred C-------C---H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 1 1 2 457899999999997543 34567778899999999999998863233344443
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=93.37 E-value=3.6 Score=43.52 Aligned_cols=118 Identities=19% Similarity=0.208 Sum_probs=70.2
Q ss_pred cCCcEEEEecCc-chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVT-GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGat-G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.++.++||||+ |.||-.++..|++-| .+|++..-+-+.. . ...|+.|+.+++.. +...-
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gG---AtVI~TTS~~s~~-r----------~efyr~LYa~~a~~-----ga~Lw 454 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGG---ATVIATTSRLSEE-R----------TEFYRSLYARHARY-----GAALW 454 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCC---cEEEEEcccccHH-H----------HHHHHHHHHhhCCC-----CceEE
Confidence 556889999986 789999999999988 4445543322211 1 12467777777664 45566
Q ss_pred EEeccCCCCCCCCCchhhHHHHh------------------cCccEEEEcccccC-c-----cccHHHHHHHhHHHHHHH
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW------------------NELDIMVNSAAITK-F-----DERYDVAFGINTLGVIHL 144 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~------------------~~~D~Vih~Aa~~~-~-----~~~~~~~~~~n~~~~~~l 144 (399)
.+..++.+.. |.+.+...+ ..+|.+|-.|+..- - ....+...++-+.....+
T Consensus 455 vVpaN~~Sys----DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rl 530 (866)
T COG4982 455 VVPANMGSYS----DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRL 530 (866)
T ss_pred EEeccccchh----hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHH
Confidence 6777766543 333332222 23688888888641 1 122333445555555566
Q ss_pred HHHHHh
Q 015874 145 VNFAKK 150 (399)
Q Consensus 145 l~~a~~ 150 (399)
+-.+++
T Consensus 531 iggl~~ 536 (866)
T COG4982 531 IGGLKK 536 (866)
T ss_pred HHHhhh
Confidence 555544
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=1.9 Score=39.78 Aligned_cols=131 Identities=20% Similarity=0.092 Sum_probs=69.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|+.++..|...|. .++.....+.-..+.+.|. .+. ..+.....++.+.... ...
T Consensus 24 ~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~d-vG~~Ka~~a~~~l~~l---np~ 96 (212)
T PRK08644 24 EKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFDVVEPSNLNRQQYFISQ-IGMPKVEALKENLLEI---NPF 96 (212)
T ss_pred HHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEeccccccccEeehhh-CCChHHHHHHHHHHHH---CCC
Confidence 557788999999 58899999999999884 3455555542111111110 000 1111122222221111 012
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++ .. ...+.+.++|+||.+... ......+.+.+.+. ..+.+|+.+..+
T Consensus 97 v~v~~~~~~i~-------~~-~~~~~~~~~DvVI~a~D~--------------~~~r~~l~~~~~~~-~~~p~I~~~~~~ 153 (212)
T PRK08644 97 VEIEAHNEKID-------ED-NIEELFKDCDIVVEAFDN--------------AETKAMLVETVLEH-PGKKLVAASGMA 153 (212)
T ss_pred CEEEEEeeecC-------HH-HHHHHHcCCCEEEECCCC--------------HHHHHHHHHHHHHh-CCCCEEEeehhh
Confidence 35555555555 22 233667899999987422 22223445566653 246788776655
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
-++.
T Consensus 154 ~~~~ 157 (212)
T PRK08644 154 GYGD 157 (212)
T ss_pred ccCC
Confidence 5553
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.38 Score=48.38 Aligned_cols=34 Identities=9% Similarity=0.256 Sum_probs=28.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++|.|.||+|.+|..++..|.+.|+. |++..|+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~---V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQ---VRILEQD 131 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCe---EEEeCCC
Confidence 478999999999999999999999954 4666553
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.93 Score=45.51 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=69.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|++++..|...|. .+++....+.-..+.+.|. ...-..+.....++++..... ..
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gv--g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n---p~ 110 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLASAGV--GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ---PD 110 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC---CC
Confidence 457788999998 67799999999999884 4556555443221111110 000001111122222211110 12
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++ .. ....+++++|+||.+... ...-..+-++|.+. .+.+|+.+..+
T Consensus 111 v~i~~~~~~i~-------~~-~~~~~~~~~DlVid~~Dn--------------~~~r~~in~~~~~~--~iP~v~~~~~g 166 (370)
T PRK05600 111 IRVNALRERLT-------AE-NAVELLNGVDLVLDGSDS--------------FATKFLVADAAEIT--GTPLVWGTVLR 166 (370)
T ss_pred CeeEEeeeecC-------HH-HHHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEEec
Confidence 34555555554 22 233677899999998643 22222333455553 45688887766
Q ss_pred eecC
Q 015874 165 VAGE 168 (399)
Q Consensus 165 v~~~ 168 (399)
-+|.
T Consensus 167 ~~G~ 170 (370)
T PRK05600 167 FHGE 170 (370)
T ss_pred CEEE
Confidence 5553
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.18 Score=48.19 Aligned_cols=38 Identities=18% Similarity=0.280 Sum_probs=31.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+++++|+|+ |.+|++++..|.+.| ..|.+..|+.++
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~~~ 152 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTVSK 152 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 34789999997 899999999999988 456777787543
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=93.20 E-value=1 Score=36.64 Aligned_cols=70 Identities=14% Similarity=0.225 Sum_probs=46.0
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|+|.|. |-+|..+++.|.+.+ ..|.++.+++... +...+ ..+.++.||.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~~~~---~~~~~------------------------~~~~~i~gd~ 49 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDPERV---EELRE------------------------EGVEVIYGDA 49 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHHH---HHHHH------------------------TTSEEEES-T
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCcHHH---HHHHh------------------------cccccccccc
Confidence 578875 679999999999965 4567776665332 22221 4578999999
Q ss_pred CCCCCCCCchhhHHH-HhcCccEEEEccc
Q 015874 95 SSEDLGLKDSNLKEE-LWNELDIMVNSAA 122 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~-~~~~~D~Vih~Aa 122 (399)
++ .+.+++ -.++++.|+-+..
T Consensus 50 ~~-------~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 50 TD-------PEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp TS-------HHHHHHTTGGCESEEEEESS
T ss_pred hh-------hhHHhhcCccccCEEEEccC
Confidence 94 555433 3457888887654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.28 Score=47.42 Aligned_cols=38 Identities=11% Similarity=0.271 Sum_probs=31.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++|++|+|+|. |.+|+.+++.|...| .+|++..|+..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~~ 185 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSSA 185 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 367899999996 889999999999989 45688878653
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.3 Score=47.16 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=29.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.++|++|+|.|++|.+|+.++..|+++|. .|++..|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence 36899999999999999999999999884 4555533
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.33 Score=43.12 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=30.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+.|++|+|.|+.+.+|.-+++.|.++| .+|++..|.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEECC
Confidence 4789999999997788999999999988 345666553
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=92.75 E-value=1.1 Score=43.48 Aligned_cols=114 Identities=16% Similarity=0.174 Sum_probs=64.8
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|.|.|| |.+|..++..|+..|.. .|.+..++++....... ++ .+.. . .......+. .
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~~---dl-----~~~~-~--------~~~~~~~I~-~-- 57 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKAL---DI-----SQAA-P--------ILGSDTKVT-G-- 57 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHHH---HH-----HHhh-h--------hcCCCeEEE-E--
Confidence 468898 99999999988877742 66777776543211110 00 0000 0 000111111 0
Q ss_pred CCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 95 SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ .+ . ..++++|+||.+++...- .....+.+..|+.-...+++.+.+..+...++.+|
T Consensus 58 t--------~d-~-~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 58 T--------ND-Y-EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred c--------CC-H-HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 1 11 2 346899999999987543 23445567778888888888888753333334333
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=92.75 E-value=1.2 Score=43.56 Aligned_cols=127 Identities=15% Similarity=0.118 Sum_probs=67.6
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|+|.|+ |.+|..+++.|+..|. ..++....+.-..+.+.|. .++-..+..-+.+++..... ...-+++.+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l---Np~v~V~~~ 74 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF---NPNVKIVAY 74 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH---CCCCeEEEE
Confidence 5899985 8899999999999884 4556554433221111000 00000111111111111110 012456677
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
..++.+. +.....++++|+||.+... ...-..+-+.|... ...+|...+.+.+|..
T Consensus 75 ~~~i~~~-------~~~~~f~~~~DvVv~a~Dn--------------~~ar~~in~~c~~~--~ip~I~~gt~G~~G~v 130 (312)
T cd01489 75 HANIKDP-------DFNVEFFKQFDLVFNALDN--------------LAARRHVNKMCLAA--DVPLIESGTTGFLGQV 130 (312)
T ss_pred eccCCCc-------cchHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHC--CCCEEEEecCcceeEE
Confidence 7777742 2223567899999987532 22233344556653 4678888887777653
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.1 Score=43.65 Aligned_cols=112 Identities=17% Similarity=0.122 Sum_probs=67.4
Q ss_pred EecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCCC
Q 015874 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (399)
Q Consensus 17 VTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 96 (399)
|.| .|.||++++..|+..+. +.++..+.+..+..... ..+|. + .......++....+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~g~---a~Dl~-----~---------~~~~~~~~~~i~~~---- 57 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDKAEGE---AMDLQ-----H---------AASFLPTPKKIRSG---- 57 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCChhhHH---HHHHH-----H---------hhcccCCCeEEecC----
Confidence 356 59999999999987663 24567776655443221 11110 0 00001122222211
Q ss_pred CCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 97 EDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ . ..++++|+||-+||...-+ ......++.|+.-...+.+.+.++.....++.+|
T Consensus 58 ------~---~-~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 113 (299)
T TIGR01771 58 ------D---Y-SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT 113 (299)
T ss_pred ------C---H-HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 1 1 4568999999999986433 4567789999999999999998863333444444
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=92.54 E-value=1.6 Score=41.00 Aligned_cols=127 Identities=12% Similarity=0.122 Sum_probs=68.3
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|+|.| .|.+|..+++.|+..|. .++++...+.-..+.+.|. ..+-..+..-+.+++..... ...-+++.+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~---np~v~i~~~ 74 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDR---NPNCKVVPY 74 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHH---CCCCEEEEE
Confidence 488888 78899999999999884 4556655443222211110 00001111112222111111 012456677
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
..++.+. .+.....++++|+||.+... ...-..+-+.+... .+.+|..++.+.+|.
T Consensus 75 ~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~--~iplI~~g~~G~~G~ 130 (234)
T cd01484 75 QNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL--IVPLIESGTEGFKGN 130 (234)
T ss_pred eccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEcccCCceE
Confidence 7777531 22223567899999987432 33333455566664 367888887776664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.18 Score=46.17 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=25.8
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec-CCcc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA-ADID 52 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~-~~~~ 52 (399)
.+...||+|-||+.|+++|.+.||+| ..-.|+ ++..
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV---~igs~r~~~~~ 38 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEV---IIGSSRGPKAL 38 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeE---EEecCCChhHH
Confidence 34455669999999999999999654 555444 4443
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.45 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=25.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
++|.|+||||++|++|++.|.+. +.+ .+..++++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~-~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYF-ELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEEEC
Confidence 47999999999999999977664 333 44555443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.2 Score=49.93 Aligned_cols=37 Identities=30% Similarity=0.240 Sum_probs=31.3
Q ss_pred chhhHhHHHHHHHHHHh-hCC-CcEEEEecCceecCCCC
Q 015874 229 NTYVFTKTMGEMLMQQS-KEN-LSLVIIRPTVVSGTYKE 265 (399)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~-~~~-~~~~i~Rp~~V~G~~~~ 265 (399)
.+|...|..-|.-++.. ... -.++|+|||.+.|.+..
T Consensus 267 f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 267 FPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred hhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 57999999999999887 322 36999999999999885
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=92.07 E-value=2.3 Score=39.87 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=71.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHH---hhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEV---LAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.++..+|+|.| -|.+|++.++.|.+.|- -++....-+.-......|.-..+ ..+...+.+++++-.. .
T Consensus 26 ekl~~~~V~VvG-iGGVGSw~veALaRsGi--g~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-----n 97 (263)
T COG1179 26 EKLKQAHVCVVG-IGGVGSWAVEALARSGI--GRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-----N 97 (263)
T ss_pred HHHhhCcEEEEe-cCchhHHHHHHHHHcCC--CeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-----C
Confidence 556778999998 67799999999999884 23444332221111111111111 1233344444442221 2
Q ss_pred CceEEEecc-CCCCCCCCCchhhHHHHhc-CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 85 EKITFVPGD-ISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 85 ~~i~~~~gD-l~~~~~~~~~~~~~~~~~~-~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
+..+....| +- .++..+.++. ++|+||.+- .|+..-..|+..|... + +-.+||
T Consensus 98 P~c~V~~~~~f~-------t~en~~~~~~~~~DyvIDai--------------D~v~~Kv~Li~~c~~~-k---i~vIss 152 (263)
T COG1179 98 PECEVTAINDFI-------TEENLEDLLSKGFDYVIDAI--------------DSVRAKVALIAYCRRN-K---IPVISS 152 (263)
T ss_pred CCceEeehHhhh-------CHhHHHHHhcCCCCEEEEch--------------hhhHHHHHHHHHHHHc-C---CCEEee
Confidence 333333332 22 3444445544 699999863 2456667888888885 3 345788
Q ss_pred ceeecCc
Q 015874 163 AYVAGER 169 (399)
Q Consensus 163 ~~v~~~~ 169 (399)
+++-+..
T Consensus 153 ~Gag~k~ 159 (263)
T COG1179 153 MGAGGKL 159 (263)
T ss_pred ccccCCC
Confidence 8777654
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.9 Score=46.85 Aligned_cols=41 Identities=22% Similarity=0.419 Sum_probs=33.1
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.+++.+++|+|.| .|-.|..+++.|.+.|+ .|.+..+..
T Consensus 7 ~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~---~V~~~D~~~ 47 (458)
T PRK01710 7 EFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGA---KVTAFDKKS 47 (458)
T ss_pred HHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 567888899999998 77799999999999994 456666543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.51 Score=45.83 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=30.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+.+++|+|.|. |.+|+.++..|.+.| .+|++..|+..
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~~ 186 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKSA 186 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCHH
Confidence 46899999995 889999999999989 46688877743
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.34 Score=49.38 Aligned_cols=40 Identities=20% Similarity=0.446 Sum_probs=33.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.+.+++|+|.|+ |.+|+.++..|.+.|. ..+++..|+.++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~~r 217 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTIEK 217 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCHHH
Confidence 367899999996 9999999999998885 467888887643
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.83 Score=44.99 Aligned_cols=36 Identities=17% Similarity=0.361 Sum_probs=27.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.++|.|.||+||.|..|++.|.. .++|. +...+.+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~-Hp~ve-~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAG-HPDVE-LILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhc-CCCeE-EEEeechh
Confidence 47899999999999999988876 56654 55544433
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.66 E-value=1 Score=43.65 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=31.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++++|+|.|+ |..+++++..|...|. .+|++..|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence 56789999996 5569999999988774 57899999865
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=91.64 E-value=3.4 Score=36.78 Aligned_cols=125 Identities=21% Similarity=0.095 Sum_probs=64.1
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHH---HHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQ---NEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|+|.| .|.+|+.++..|.+.|. .+++....+.-..+.+.|.. +. ..+..-+.++.+.... ...-+++.+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~v~~sNl~Rq~~~~~~-vg~~Ka~~~~~~l~~l---np~v~i~~~ 73 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDVVEPSNLNRQQYFLSQ-IGEPKVEALKENLREI---NPFVKIEAI 73 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEEcCcchhcccccHhh-CCChHHHHHHHHHHHH---CCCCEEEEE
Confidence 488998 58899999999999884 34566555431111111100 01 1111112222211111 012345555
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
...+. . +...++++++|+||.+... ...-..+.+.+.+. ....+|+.+..+-|+.
T Consensus 74 ~~~~~-------~-~~~~~~l~~~DlVi~~~d~--------------~~~r~~i~~~~~~~-~~ip~i~~~~~~~~~~ 128 (174)
T cd01487 74 NIKID-------E-NNLEGLFGDCDIVVEAFDN--------------AETKAMLAESLLGN-KNKPVVCASGMAGFGD 128 (174)
T ss_pred EeecC-------h-hhHHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHH-CCCCEEEEehhhccCC
Confidence 55554 2 2234667899999998432 12223355555553 2466777765555554
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.46 Score=45.85 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=31.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..+.+|+|+||+|.+|..+++.+.+.| ..|++++|+.+
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~~ 198 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSPE 198 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCHH
Confidence 457899999999999999999999999 45677776653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.77 Score=44.21 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=28.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|.|.| +|.+|..++..|+..| +.|++..++.+.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la~~G---~~V~l~d~~~~~ 38 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTAFHG---FDVTIYDISDEA 38 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHHhcC---CeEEEEeCCHHH
Confidence 6899998 5999999999999999 456777777644
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.24 Score=48.84 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=24.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQP 37 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~ 37 (399)
-.|.+|||+||+|.+|+..+.-+.+.|.
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC
Confidence 3478999999999999999988777784
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.69 Score=44.65 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=27.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
.++|++|+|.|+++.+|+-++..|+++|.+|
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatV 185 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASV 185 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 3789999999999999999999999988443
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.27 Score=44.12 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=27.3
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+|.|.|| |.+|+.++..++..| +.|....++.+..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G---~~V~l~d~~~~~l 35 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAG---YEVTLYDRSPEAL 35 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTT---SEEEEE-SSHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCC---CcEEEEECChHHH
Confidence 5889996 999999999999999 5568887766543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=91.09 E-value=1.8 Score=42.32 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=30.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.|++|.|.| .|-||+.+++.|..-| .+|++..|..
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG---~~V~~~~~~~ 169 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWG---FPLRCWSRSR 169 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCC
Confidence 36789999997 9999999999999888 4557766643
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.98 E-value=2.2 Score=46.23 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=54.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|++++..|...|- -+++....+.-..+.+.|. ...-..+.+...++++.... ...
T Consensus 39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i---nP~ 112 (679)
T PRK14851 39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI---NPF 112 (679)
T ss_pred HHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh---CCC
Confidence 567889999998 78899999999999984 2334333222111111110 00001122222222221111 013
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcc
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSA 121 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~A 121 (399)
.+++.+...++ ..+ ...++.++|+||.+.
T Consensus 113 ~~I~~~~~~i~-------~~n-~~~~l~~~DvVid~~ 141 (679)
T PRK14851 113 LEITPFPAGIN-------ADN-MDAFLDGVDVVLDGL 141 (679)
T ss_pred CeEEEEecCCC-------hHH-HHHHHhCCCEEEECC
Confidence 46677777776 233 346778999999765
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=90.98 E-value=1.4 Score=41.00 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=28.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCC-CcCeEEEEEec
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFVRA 48 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~-~V~~v~~~~R~ 48 (399)
++++|.|.| +|.+|+.++..|++.+. .+..+++..|+
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 467899998 79999999999998763 34346666664
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.74 Score=44.34 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=29.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
++|.|.|+ |.+|..++..|++.|++ |.+..|+++..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~---V~~~d~~~~~~ 37 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQ---TTLVDIKQEQL 37 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCc---EEEEeCCHHHH
Confidence 57999985 99999999999999954 57777765543
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.32 Score=48.58 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=28.8
Q ss_pred cEEEEecCcchhHHHHHHHHH-HhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll-~~g~~V~~v~~~~R~ 48 (399)
|+|.|.||||.+|+.+++.|. ++...+..+..+.-+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~ 37 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS 37 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch
Confidence 579999999999999999998 656666666666543
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.67 Score=44.69 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=32.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+++++|+|.|+ |..|++++..|.+.|. .+|++..|+.++.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~--~~i~I~nRt~~ka 162 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGV--TDITVINRNPDKL 162 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCC--CeEEEEeCCHHHH
Confidence 46889999985 8899999999999884 4688888886543
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=90.52 E-value=1.8 Score=35.84 Aligned_cols=29 Identities=14% Similarity=0.368 Sum_probs=22.9
Q ss_pred EEEEecCcchhHHHHHHHHHHh-CCCcCeEEEE
Q 015874 14 TILVSGVTGFVAKVFIEKILRV-QPNVKKLYLF 45 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~ 45 (399)
+|.|+|++|.+|..++..|... + ..+.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~---~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPD---FEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCC---ceEEEE
Confidence 4889999999999999998884 4 344555
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=90.36 E-value=4 Score=41.79 Aligned_cols=134 Identities=8% Similarity=0.012 Sum_probs=66.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHH---HHHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR---FQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+.+.+|+|.|++| +|+.+++.|+..|- ..+++..-..-...-+.+ +..+-+.+..-+.+.+...+. + ..
T Consensus 16 ~~L~~s~VlliG~gg-lGsEilKNLvL~GI--g~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eL-N--p~ 89 (425)
T cd01493 16 AALESAHVCLLNATA-TGTEILKNLVLPGI--GSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQEL-N--PD 89 (425)
T ss_pred HHHhhCeEEEEcCcH-HHHHHHHHHHHcCC--CeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHH-C--CC
Confidence 457778999998666 99999999999883 334444322110000000 000000011111111111110 0 11
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++++..++.+ ..+....++.+.|+||-+-.. ......+.+.|.+ ....+|+++|.+
T Consensus 90 V~i~~~~e~~~~------ll~~~~~f~~~fdiVI~t~~~--------------~~~~~~L~~~c~~--~~iPlI~~~s~G 147 (425)
T cd01493 90 VNGSAVEESPEA------LLDNDPSFFSQFTVVIATNLP--------------ESTLLRLADVLWS--ANIPLLYVRSYG 147 (425)
T ss_pred CEEEEEecccch------hhhhHHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHH--cCCCEEEEeccc
Confidence 244555544432 112223567889999854211 1122335566766 346799999999
Q ss_pred eecCc
Q 015874 165 VAGER 169 (399)
Q Consensus 165 v~~~~ 169 (399)
.||.-
T Consensus 148 ~~G~v 152 (425)
T cd01493 148 LYGYI 152 (425)
T ss_pred CEEEE
Confidence 99854
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.33 E-value=1.5 Score=40.06 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=29.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.++|++|+|.|| |-+|...++.|++.|. +|++..+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~ 41 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISP 41 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcC
Confidence 478999999996 9999999999999994 4566654
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.23 E-value=0.48 Score=47.38 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=25.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVR 47 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R 47 (399)
++|.|.||||++|+.+++.|+++ ...+.++..+..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 68999999999999999866654 343444555544
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.99 Score=46.03 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=29.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.|+|.|.| .|++|..++..|.+.| +.|++..|++.+
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G---~~V~~~D~~~~~ 38 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQ---KQVIGVDINQHA 38 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCC---CEEEEEeCCHHH
Confidence 47899997 7999999999999999 455777776543
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.77 Score=40.44 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=24.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN 38 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~ 38 (399)
.++||+|+|.|.++.+|+-|+..|.++|..
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at 62 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGAT 62 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-E
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCe
Confidence 378999999999999999999999998843
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=90.03 E-value=0.71 Score=45.63 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=30.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.||+|.|.| .|-||+.+++.|...| .+|.+..|..
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G---~~V~~~d~~~ 183 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFG---MRILYYSRTR 183 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 47899999998 6999999999999888 4557766654
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=90.03 E-value=1.5 Score=39.00 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=32.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+.|++|.|.| .|-||+++++.|..-| .+|....|....
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~~ 71 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPKP 71 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCCh
Confidence 357889999997 7999999999999988 567888887653
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.96 E-value=2.7 Score=47.11 Aligned_cols=132 Identities=13% Similarity=0.052 Sum_probs=68.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+++.+|+|.| .|.+|+.++..|...|- -++....-+.-..+.+.|. ...-+.+.+...+++..... ...
T Consensus 328 ~kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I---NP~ 401 (989)
T PRK14852 328 RRLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV---NPF 401 (989)
T ss_pred HHHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH---CCC
Confidence 457888999998 77899999999999883 2334332222111111110 00001111122222221110 112
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+...++ .+...++++++|+||.+.-... +.....+.+.|.+ ....+|+.++.+
T Consensus 402 v~I~~~~~~I~--------~en~~~fl~~~DiVVDa~D~~~------------~~~rr~l~~~c~~--~~IP~I~ag~~G 459 (989)
T PRK14852 402 LDIRSFPEGVA--------AETIDAFLKDVDLLVDGIDFFA------------LDIRRRLFNRALE--LGIPVITAGPLG 459 (989)
T ss_pred CeEEEEecCCC--------HHHHHHHhhCCCEEEECCCCcc------------HHHHHHHHHHHHH--cCCCEEEeeccc
Confidence 45666655555 2334467889999998653211 1122345566665 346688777755
Q ss_pred eec
Q 015874 165 VAG 167 (399)
Q Consensus 165 v~~ 167 (399)
.+|
T Consensus 460 ~~g 462 (989)
T PRK14852 460 YSC 462 (989)
T ss_pred cCe
Confidence 444
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.73 Score=45.07 Aligned_cols=40 Identities=13% Similarity=0.004 Sum_probs=31.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+|.+|+|+||+|.+|..++..+...| .+|++.+++.++
T Consensus 149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~G---~~Vi~~~~~~~~ 188 (338)
T cd08295 149 PKKGETVFVSAASGAVGQLVGQLAKLKG---CYVVGSAGSDEK 188 (338)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 3467899999999999999998877778 456777776543
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.78 E-value=0.37 Score=47.10 Aligned_cols=35 Identities=6% Similarity=0.111 Sum_probs=29.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
++|.| ||||-+|+.+++.|.+++..+.+++.+.-+
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 57999 999999999999999988888777776543
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.72 E-value=1.3 Score=42.82 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=32.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
..+++|+|.|+ |..|++++..|...|. .+|+++.|+..+.
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~--~~I~I~nR~~~ka 164 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGV--ERLTIFDVDPARA 164 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCC--CEEEEECCCHHHH
Confidence 56789999995 7799999999999884 4688888876544
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=89.70 E-value=2.1 Score=37.52 Aligned_cols=36 Identities=11% Similarity=0.193 Sum_probs=27.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+|+|.+.| .|-+|+.+++.|++.| +.|++..|+.++
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g---~~v~~~d~~~~~ 36 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAG---YEVTVYDRSPEK 36 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTT---TEEEEEESSHHH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcC---CeEEeeccchhh
Confidence 47899998 6999999999999999 556777776543
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.62 E-value=0.8 Score=44.20 Aligned_cols=40 Identities=13% Similarity=0.082 Sum_probs=32.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.++++|+|.|| |..|++++..|.+.|. .+|++..|+.++.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~~ka 164 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDTSRA 164 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCHHHH
Confidence 45789999995 8899999999998885 5688888876543
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=89.60 E-value=1.4 Score=42.91 Aligned_cols=76 Identities=9% Similarity=0.143 Sum_probs=51.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+|+.|.|+|+.| +|+-=++.--+-| .+|++++++.. ++++.+++ ..+
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG---~rV~vis~~~~kkeea~~~L---------------------------GAd 228 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMG---MRVTVISTSSKKKEEAIKSL---------------------------GAD 228 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhC---cEEEEEeCCchhHHHHHHhc---------------------------Ccc
Confidence 4789999999999 9977666666669 67799999873 33333332 222
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
.+ .|.++ +.++.+.+.+-.|.++|++..
T Consensus 229 ~f-v~~~~------d~d~~~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 229 VF-VDSTE------DPDIMKAIMKTTDGGIDTVSN 256 (360)
T ss_pred ee-EEecC------CHHHHHHHHHhhcCcceeeee
Confidence 22 23342 677776777778888887653
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=89.60 E-value=1.1 Score=43.26 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=30.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
++|.|.|+ |.+|..++..|+..| +.|++..++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G---~~V~l~d~~~~~~ 41 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAG---VDVLVFETTEELA 41 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCC---CEEEEEECCHHHH
Confidence 47999985 999999999999999 5568888877654
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=89.45 E-value=1.1 Score=43.39 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=31.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+|.+|+|+||+|.+|..++..+...| .+|++.+++.++
T Consensus 141 ~~~g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~~~ 180 (329)
T cd08294 141 PKAGETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSDDK 180 (329)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 3467899999999999999888877778 456777766543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=89.37 E-value=3.3 Score=40.71 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=28.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|.|.| +|-+|+.++..++..| +.|.+..++.+.
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~aG---~~V~l~D~~~~~ 42 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALAHG---LDVVAWDPAPGA 42 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCC---CeEEEEeCCHHH
Confidence 6899997 6999999999999999 455777776543
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=89.34 E-value=6.5 Score=38.01 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=28.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
.+.+.+.+|||.| .|.+|..+++.|+..|- ..++...
T Consensus 14 q~kL~~s~VLIvG-~gGLG~EiaKnLalaGV--g~itI~D 50 (286)
T cd01491 14 MKKLQKSNVLISG-LGGLGVEIAKNLILAGV--KSVTLHD 50 (286)
T ss_pred HHHHhcCcEEEEc-CCHHHHHHHHHHHHcCC--CeEEEEc
Confidence 3567778999998 56689999999999984 3444443
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.33 E-value=4.7 Score=40.59 Aligned_cols=38 Identities=18% Similarity=0.299 Sum_probs=30.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
-+.+++.+|+|.| .|.+|++++..|.+.|- .+++.+.-
T Consensus 171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~GV--geI~LVD~ 208 (393)
T PRK06153 171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTPV--REIHLFDG 208 (393)
T ss_pred HHHHhhCcEEEEc-CCccHHHHHHHHHHcCC--CEEEEECC
Confidence 4678889999998 67789999999999883 45555543
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=89.17 E-value=2 Score=41.91 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=21.8
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
+|.|.|||||.|..|++.|.. .+++
T Consensus 3 ~v~IvGasGy~G~el~rlL~~-HP~~ 27 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSG-RDDI 27 (310)
T ss_pred eEEEECCCChhHHHHHHHHhC-CCCe
Confidence 799999999999999988876 4665
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.09 E-value=1.9 Score=43.55 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=30.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.||+|.|.| .|-||+.+++.|..-| .+|.+..|..
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG---~~V~~~dr~~ 225 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFD---VKLHYTDRHR 225 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEECCCC
Confidence 37889999998 7999999999999888 4567776654
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=2.7 Score=43.52 Aligned_cols=39 Identities=10% Similarity=0.195 Sum_probs=30.2
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
...+.+++|+|.|+ |.+|..+++.|.+.|. .|.+..++.
T Consensus 11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~---~V~~~d~~~ 49 (480)
T PRK01438 11 HSDWQGLRVVVAGL-GVSGFAAADALLELGA---RVTVVDDGD 49 (480)
T ss_pred ccCcCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 34567889999995 8899999999999994 456665443
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=89.04 E-value=0.96 Score=44.22 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=31.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.+++|+|.|+ |-+|..+++.|...|. ..|++..|+.++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~~r 214 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTYER 214 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCHHH
Confidence 57899999986 9999999999987553 567888887643
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=88.99 E-value=1.1 Score=43.48 Aligned_cols=40 Identities=15% Similarity=0.058 Sum_probs=31.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-+|.+|+|+||+|.+|..++..+...| .+|++.+++.++
T Consensus 136 ~~~g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~~~ 175 (325)
T TIGR02825 136 VKGGETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEK 175 (325)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 3467899999999999999887777778 456777776543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=88.93 E-value=1.4 Score=42.92 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=28.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+|+|+||+|.+|..++..+...|. .+|++.+++.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCHH
Confidence 7999999999999999887777784 14677776654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=88.92 E-value=2.4 Score=41.50 Aligned_cols=32 Identities=13% Similarity=0.339 Sum_probs=24.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
+.+|.|.||||++|..|++.|.+ .+++ ++..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~-hp~~-~l~~~ 33 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAG-RSDI-ELLSI 33 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhc-CCCe-EEEEE
Confidence 35899999999999999987765 4454 34444
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=88.70 E-value=1.3 Score=42.15 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=32.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..+|++|+|+|++|.+|..++..+.+.| .+|++.+++..
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~~ 180 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSAE 180 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 4568999999999999999999988888 56688777653
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=88.64 E-value=3.8 Score=41.95 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=28.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.+++|+|+|+ |.+|.++++.|.++|+ .|.+..+..
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~---~v~~~d~~~ 38 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGA---EVAAYDAEL 38 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 46789999997 5799999999999994 456655443
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.63 E-value=1.8 Score=43.42 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=29.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+|+|||||+...+|-.+++.|.+.|+ +|++.....
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~---~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH---TVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 458999999999999999999999994 456665543
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.51 E-value=3.9 Score=38.87 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=29.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++|.|.|++|=+|+.+++.+.+.. ++.-+-++.|...
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~-~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAP-DLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCC-CceEEEEEecCCc
Confidence 4789999999999999999988754 4444566666654
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=88.27 E-value=1.2 Score=45.64 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=31.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.+++|+|.|+ |-+|..+++.|...|. ..|++..|+...
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~~r 218 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTLER 218 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCHHH
Confidence 67899999985 9999999999988874 357888886543
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=88.20 E-value=1.4 Score=44.15 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=29.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+.+.+|+|.|+ |-+|...++.|...| .+|.+..|+..
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lG---a~V~v~d~~~~ 201 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLG---ATVTILDINID 201 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCC---CeEEEEECCHH
Confidence 35678999986 899999999999989 45677777643
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=88.19 E-value=1.9 Score=45.06 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=29.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
|+|.|.| +|.+|+.++..|++.|+ .|.+..|+.+..
T Consensus 5 ~kIavIG-~G~MG~~iA~~la~~G~---~V~v~D~~~~~~ 40 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFLLAGI---DVAVFDPHPEAE 40 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCC---eEEEEeCCHHHH
Confidence 5788886 99999999999999994 567777766543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.17 E-value=1.1 Score=43.61 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=29.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+.|++|.|.| .|-||+.+++.|..-| .+|.+..|+
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~afG---~~V~~~~r~ 154 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKAFG---MNIYAYTRS 154 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 47899999998 7999999999877768 456777664
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.08 E-value=2.7 Score=40.32 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=27.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|+|.|.| .|.+|..++..|.+.| +.|.+..|+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g---~~V~~~d~~~ 33 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLG---HTVYGVSRRE 33 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 4799998 8999999999999998 4567777754
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.89 E-value=1.1 Score=43.41 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=27.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
++||+|+|.|-+|.+|+.++..|+++|+.|
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tV 185 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATV 185 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEE
Confidence 689999999999999999999999999544
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.77 E-value=1 Score=44.47 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=36.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHH
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALR 57 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~ 57 (399)
+..+|++|+|+|+. .+|..-++.+.+.| .+|+++.|+.++.+.+++
T Consensus 163 ~~~pG~~V~I~G~G-GlGh~avQ~Aka~g---a~Via~~~~~~K~e~a~~ 208 (339)
T COG1064 163 NVKPGKWVAVVGAG-GLGHMAVQYAKAMG---AEVIAITRSEEKLELAKK 208 (339)
T ss_pred CCCCCCEEEEECCc-HHHHHHHHHHHHcC---CeEEEEeCChHHHHHHHH
Confidence 45678999999976 78877777777689 677999999987755544
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.69 E-value=3.7 Score=40.31 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=29.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
++|.|.|| |--|++|+..|.++| +.|..-.|+++..
T Consensus 2 ~kI~ViGa-GswGTALA~~la~ng---~~V~lw~r~~~~~ 37 (329)
T COG0240 2 MKIAVIGA-GSWGTALAKVLARNG---HEVRLWGRDEEIV 37 (329)
T ss_pred ceEEEEcC-ChHHHHHHHHHHhcC---CeeEEEecCHHHH
Confidence 68999984 556999999999999 5568888886543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.58 E-value=1.2 Score=42.95 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=34.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA 55 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~ 55 (399)
.+++|+|.| +|..+++++..|++.|. .+|+++.|+.++.+.+
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~--~~i~V~NRt~~ra~~L 166 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGA--KRITVVNRTRERAEEL 166 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEEeCCHHHHHHH
Confidence 578999998 56689999999999984 5789999987765433
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=87.50 E-value=4.4 Score=39.33 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=28.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.|.| .|.+|+.++..|.+.|+ .|.+..|+..
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~g~---~V~~~~r~~~ 35 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARNGH---DVTLWARDPE 35 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEECCHH
Confidence 6899998 59999999999999994 4577777653
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=87.49 E-value=1.5 Score=41.66 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=31.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
..++.+|+|+|++|.+|..++..+...| .+|.+..++.
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g---~~v~~~~~~~ 174 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALG---ARVIATAGSE 174 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcC---CEEEEEcCCH
Confidence 4567899999999999999999999988 4567776654
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=87.44 E-value=1.3 Score=44.94 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=28.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
|+|.|.| .|++|..++..|.+.|+ .|.+..|+..+
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~---~V~~~d~~~~~ 35 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH---EVTGVDIDQEK 35 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC---eEEEEECCHHH
Confidence 5788997 89999999999999995 45777776543
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=87.35 E-value=3.4 Score=39.10 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=30.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+|+|.|.| .|-+|+.++..|.+.|..+..|.+..|+..
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~ 39 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPE 39 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 46899998 599999999999998854456778877653
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=87.14 E-value=7.7 Score=44.09 Aligned_cols=121 Identities=14% Similarity=0.108 Sum_probs=66.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-----------HHHHHHHHhhhhhHHHHHhhhc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-----------ALRFQNEVLAKDVFNVLKEKWG 76 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~ 76 (399)
..+...+|||.|+ |.+|..+++.|+..|- ..++......-...- ..+.+.+. ..+.|.+.-
T Consensus 20 ~kL~~s~VLIiG~-gGLG~EiaKnL~laGV--g~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea----~~~~L~eLN- 91 (1008)
T TIGR01408 20 QKMAKSNVLISGM-GGLGLEIAKNLVLAGV--KSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEA----VVKKLAELN- 91 (1008)
T ss_pred HHHhhCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCeecHhhCCCceecchHHcCchHHHH----HHHHHHHHC-
Confidence 4567789999995 5699999999999994 345544322110000 00001100 011111110
Q ss_pred ccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 015874 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (399)
Q Consensus 77 ~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~ 156 (399)
..-+++.+..+++ ...+.++|+||.+-.. ......+-++|++.++...
T Consensus 92 ------p~V~V~~~~~~l~------------~e~l~~fdvVV~t~~~--------------~~~~~~in~~cr~~~~~I~ 139 (1008)
T TIGR01408 92 ------PYVHVSSSSVPFN------------EEFLDKFQCVVLTEMS--------------LPLQKEINDFCHSQCPPIA 139 (1008)
T ss_pred ------CCceEEEecccCC------------HHHHcCCCEEEECCCC--------------HHHHHHHHHHHHHcCCCeE
Confidence 1123444444333 2456789999986322 2223345567777533357
Q ss_pred EEEEecceeecC
Q 015874 157 FVHVSTAYVAGE 168 (399)
Q Consensus 157 ~v~~SS~~v~~~ 168 (399)
||+.++.+.+|.
T Consensus 140 fI~~~~~G~~G~ 151 (1008)
T TIGR01408 140 FISADVRGLFGS 151 (1008)
T ss_pred EEEEeecceEEE
Confidence 999988888874
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=87.06 E-value=1.5 Score=44.84 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=32.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.+.+++|+|.|+ |-+|..+++.|.+.|. ..|++..|+..+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~~r 216 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTYER 216 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCHHH
Confidence 367899999996 9999999999988773 457888887543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=87.06 E-value=3.2 Score=39.58 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=24.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
|+|.|.| .|.||+.+++.|.+.+..+..+.+..|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~ 36 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN 36 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence 6899999 6999999999998753233223344343
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.97 E-value=4 Score=37.96 Aligned_cols=38 Identities=13% Similarity=0.264 Sum_probs=26.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~ 52 (399)
++|.|.| +|.||..+++.+.. | -++..+.+..|+.++.
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~-~~~~~e~v~v~D~~~ek~ 39 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRD-GRVDFELVAVYDRDEEKA 39 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhc-CCcceeEEEEecCCHHHH
Confidence 4688887 89999999987765 4 3334455555665554
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=86.89 E-value=1.7 Score=45.57 Aligned_cols=40 Identities=18% Similarity=0.315 Sum_probs=33.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.+++|+|.|+ |-+|..+++.|...|. .+|++..|+.++.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~era 303 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSEERV 303 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCHHHH
Confidence 56899999997 9999999999998884 4578888876543
|
|
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=86.75 E-value=6.4 Score=38.33 Aligned_cols=129 Identities=22% Similarity=0.176 Sum_probs=68.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhh---hhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLA---KDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~ 84 (399)
+-+.|.-|+|.| .|.+|+|.+--|++.|. .++....-.+-..+.+.|..-+.++ .+...-|++.+... .++
T Consensus 70 ~kl~~syVVVVG-~GgVGSwv~nmL~RSG~--qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~ski-aPw-- 143 (430)
T KOG2018|consen 70 EKLTNSYVVVVG-AGGVGSWVANMLLRSGV--QKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKI-APW-- 143 (430)
T ss_pred HHhcCcEEEEEe-cCchhHHHHHHHHHhcC--ceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhh-Ccc--
Confidence 446677788888 57799999999999995 4455554443333333332222211 12222233332211 000
Q ss_pred CceEEE--eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 85 EKITFV--PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 85 ~~i~~~--~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
..+... .-+..+ .++ -++.++|.|+.|- .|+..-..|+++|-.. +.+ .+||
T Consensus 144 ~eIdar~~l~~~~s------~ed---ll~gnPdFvvDci--------------DNidtKVdLL~y~~~~-~l~---Viss 196 (430)
T KOG2018|consen 144 CEIDARNMLWTSSS------EED---LLSGNPDFVVDCI--------------DNIDTKVDLLEYCYNH-GLK---VISS 196 (430)
T ss_pred ceecHHHhhcCCCc------hhh---hhcCCCCeEeEhh--------------hhhhhhhHHHHHHHHc-CCc---eEec
Confidence 111111 111111 111 2456799999873 3667777899999874 554 3566
Q ss_pred ceeecCc
Q 015874 163 AYVAGER 169 (399)
Q Consensus 163 ~~v~~~~ 169 (399)
+++....
T Consensus 197 ~Gaaaks 203 (430)
T KOG2018|consen 197 TGAAAKS 203 (430)
T ss_pred cCccccC
Confidence 6665544
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=86.68 E-value=1.4 Score=45.75 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=28.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+|+|.|.| +|++|..++..|.+.|+. ++|.++..+++
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g-~~V~gvD~~~~ 37 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPD-IEVVVVDISVP 37 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC-CeEEEEECCHH
Confidence 47899996 999999999999988644 35677765543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=86.61 E-value=1.1 Score=41.00 Aligned_cols=37 Identities=32% Similarity=0.373 Sum_probs=29.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
..++||+|+|+|. |-+|+++++.|.+.|+ +|.+..++
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~---~Vvv~D~~ 60 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGA---KLIVADIN 60 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 3578899999996 7899999999999995 44555444
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=86.60 E-value=1 Score=43.39 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=27.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
+.||+|.|.|.+|.+|+-++..|+++|++|
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatV 185 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATV 185 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEE
Confidence 689999999999999999999999999554
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=86.54 E-value=0.6 Score=42.59 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=24.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
|+|.|.||+|-+|+.++..|.+.|+.|
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v 27 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGV 27 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEE
Confidence 589999999999999999999999665
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=86.47 E-value=0.73 Score=48.55 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=31.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++++|+|+|+ |.+|++++..|.+.| .+|+++.|+.+
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G---~~V~i~nR~~e 413 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKG---ARVVIANRTYE 413 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEcCCHH
Confidence 56899999998 899999999999999 45677777643
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=86.26 E-value=0.33 Score=41.03 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=25.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
..++|-|.|+ |=+|.+|++.|.+.|+.| +-+.+|+.
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v--~~v~srs~ 44 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHEV--VGVYSRSP 44 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSEE--EEESSCHH
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCeE--EEEEeCCc
Confidence 3478999996 999999999999999654 22334554
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=85.90 E-value=2.2 Score=40.95 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=31.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..+.+|+|+|++|.+|..++..+...| .+|++.+++..
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g---~~v~~~~~~~~ 202 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFG---ATVIATAGSED 202 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 467899999999999999999999989 45677766553
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=85.73 E-value=2.7 Score=40.01 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=31.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++.+|+|+|++|.+|..++..+...| .++++.+++.+
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~g---~~v~~~~~~~~ 180 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAAG---ATVIATTRTSE 180 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEcCCHH
Confidence 457899999999999999999999888 55677776653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.64 E-value=5.3 Score=40.13 Aligned_cols=33 Identities=6% Similarity=-0.013 Sum_probs=25.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
++|.|.|.+|.||..+++.|.+.. . ..|+...|
T Consensus 5 ~~I~IIGl~GliGgslA~alk~~~-~-~~V~g~D~ 37 (370)
T PRK08818 5 PVVGIVGSAGAYGRWLARFLRTRM-Q-LEVIGHDP 37 (370)
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-C-CEEEEEcC
Confidence 689999999999999999998752 2 45565544
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.58 E-value=3.6 Score=41.53 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=29.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+.||+|.|.| .|-||+.+++.|..-|. +|.+..|.
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~---~V~~~d~~ 231 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNC---NLLYHDRL 231 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCC---EEEEECCC
Confidence 47899999999 89999999999998884 45666554
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=85.51 E-value=1.1 Score=35.13 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=26.7
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADI 51 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~ 51 (399)
+|.|. |+|-+|++|++.|++.|..-.+|... .|+.++
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~ 38 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEK 38 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHH
Confidence 46777 59999999999999998333455644 666543
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.36 E-value=2 Score=42.49 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=30.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..+|.+|+|+||+|.+|...+..+...| .+|++.+++.+
T Consensus 156 ~~~g~~VlV~GaaG~vG~~aiqlAk~~G---~~Vi~~~~~~~ 194 (348)
T PLN03154 156 PKKGDSVFVSAASGAVGQLVGQLAKLHG---CYVVGSAGSSQ 194 (348)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEcCCHH
Confidence 3467899999999999999987777778 45566665543
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=85.15 E-value=3.8 Score=43.37 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=46.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
-+|+|.| .|-+|+++++.|.++|++ +.+..+++++ .++.++ .+...+.|
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~---vvvId~d~~~---~~~~~~------------------------~g~~~i~G 466 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIP---LVVIETSRTR---VDELRE------------------------RGIRAVLG 466 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCC---EEEEECCHHH---HHHHHH------------------------CCCeEEEc
Confidence 3588887 788999999999999955 4565554432 222221 46788999
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNS 120 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~ 120 (399)
|.++ .+.+++. .+++|.++-+
T Consensus 467 D~~~-------~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 467 NAAN-------EEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCC-------HHHHHhcCccccCEEEEE
Confidence 9994 4444332 3478877654
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.07 E-value=2.7 Score=40.57 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=27.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
+.|++|+|.|-+..+|+-|+..|+++|..|
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atV 186 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCTV 186 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCeE
Confidence 679999999999999999999999988443
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=85.01 E-value=2.4 Score=39.16 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=30.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++.+|+|+|++| +|..++..+...| .+|.+.+++.+
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~~ 169 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSDE 169 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCHH
Confidence 5678999999999 9999998888888 55677777643
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.99 E-value=2.5 Score=40.95 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=64.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+-..|.+|+|+||+|-+|+....--.-+| .+|...+-+.++... +.++.|+ ...+
T Consensus 147 qpk~GetvvVSaAaGaVGsvvgQiAKlkG---~rVVGiaGg~eK~~~----------------l~~~lGf------D~~i 201 (340)
T COG2130 147 QPKAGETVVVSAAAGAVGSVVGQIAKLKG---CRVVGIAGGAEKCDF----------------LTEELGF------DAGI 201 (340)
T ss_pred CCCCCCEEEEEecccccchHHHHHHHhhC---CeEEEecCCHHHHHH----------------HHHhcCC------ceee
Confidence 44678899999999999987776544558 445776666554322 2222222 1222
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceee
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVA 166 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~ 166 (399)
.+..-|+ .....+..-+++|+.|.|.|- .+++++... +..-|++.+..++-|
T Consensus 202 dyk~~d~--------~~~L~~a~P~GIDvyfeNVGg-------------------~v~DAv~~~ln~~aRi~~CG~IS~Y 254 (340)
T COG2130 202 DYKAEDF--------AQALKEACPKGIDVYFENVGG-------------------EVLDAVLPLLNLFARIPVCGAISQY 254 (340)
T ss_pred ecCcccH--------HHHHHHHCCCCeEEEEEcCCc-------------------hHHHHHHHhhccccceeeeeehhhc
Confidence 2222222 223332334579999999875 233343331 234588889988888
Q ss_pred cCc
Q 015874 167 GER 169 (399)
Q Consensus 167 ~~~ 169 (399)
...
T Consensus 255 N~~ 257 (340)
T COG2130 255 NAP 257 (340)
T ss_pred CCC
Confidence 864
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=84.96 E-value=3 Score=39.68 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=31.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..|.+|+|.|++|.+|..++..+...| .+|++.+++.+
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g---~~v~~~~~~~~ 178 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALG---ATVTATTRSPE 178 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 457899999999999999998888888 45677776653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=84.85 E-value=5.5 Score=38.65 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=29.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++|.|.| +|.+|..++..|.+.|+. ..|.+..|+..
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~-~~V~~~dr~~~ 42 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLA-GEIVGADRSAE 42 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCC-cEEEEEECCHH
Confidence 36899998 999999999999988852 35777777653
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=84.71 E-value=3.6 Score=41.15 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=45.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+++|+|.|+ |.+|+.++..+.+.| .+|+++....+.. ...+ .-.++.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG---~~v~~~d~~~~~p--a~~~---------------------------ad~~~~ 48 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLG---YKVIVLDPDPDSP--AAQV---------------------------ADEVIV 48 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCCCCc--hhHh---------------------------CceEEe
Confidence 478999996 799999999999999 5567776554332 1111 112445
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMV 118 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vi 118 (399)
+|.. |.+.+.++.+.+|+|.
T Consensus 49 ~~~~-------D~~~l~~~a~~~dvit 68 (372)
T PRK06019 49 ADYD-------DVAALRELAEQCDVIT 68 (372)
T ss_pred cCCC-------CHHHHHHHHhcCCEEE
Confidence 6766 6667767778889874
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=84.70 E-value=2.5 Score=40.14 Aligned_cols=38 Identities=11% Similarity=0.177 Sum_probs=31.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++.+++|+|++|.+|..++..+...| .+|++..++..
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~~ 175 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFG---ARVFTTAGSDE 175 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 467899999999999999998888888 45677776543
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=84.63 E-value=5.6 Score=36.41 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
++|++|+|.| .|-+|..-++.|++.|. .|++....
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga---~VtVvsp~ 41 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKAGA---QLRVIAEE 41 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 6789999998 78899999999999994 45666443
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 399 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 1e-10 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 157 bits (397), Expect = 2e-43
Identities = 77/367 (20%), Positives = 130/367 (35%), Gaps = 66/367 (17%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
E +T+L++G TGF+ + + ++LR +L VRA + A R + F+
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRL------EKTFDS 125
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
+ ++++ V GD S DLGL L +D++V+SAA+ Y
Sbjct: 126 GDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFP-Y 183
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
FG N G L+ A KLK F +VSTA V S DA++
Sbjct: 184 HELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAI----------EPSAFTEDADI 232
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ--SKEN 248
+VI R GW Y +K GE+L+++
Sbjct: 233 RVIS------------------------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCA 268
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ--------GNLRCLVGETKVIM 300
L + + R ++ + D + + ++ +
Sbjct: 269 LPVAVFRCGMILADTSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHF 326
Query: 301 DVIPVDMVVNAMIVAMVAHAKQPSDAN-IYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D +PV V A+ V A YHV + + + L +D W+
Sbjct: 327 DGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVD----------WLI 376
Query: 360 KQGKPVK 366
+ G P++
Sbjct: 377 EAGYPIR 383
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 38/305 (12%), Positives = 72/305 (23%), Gaps = 93/305 (30%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
V G TG + I ++ L R +
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLV---LIHRPSS------------------------ 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDER-YDVA 133
++ + ++ D E LD ++ SA R +
Sbjct: 49 ---QIQRLAYLEPECRVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEE 98
Query: 134 FGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193
+ ++ ++V +AY
Sbjct: 99 VASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHP----------------------- 134
Query: 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML-MQQSKENLSLV 252
+G P E + YV K + +Q++ L +V
Sbjct: 135 ---------QGLPGHEGLFY-----DSLPSGKSS---YVLCKWALDEQAREQARNGLPVV 177
Query: 253 IIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311
I P +V G D+ T + A G + V +VI
Sbjct: 178 IGIPGMVLG------EL---DIGPTTGRVITAIGNGEMTHYVAGQ---RNVIDAAEAGRG 225
Query: 312 MIVAM 316
+++A+
Sbjct: 226 LLMAL 230
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 69/487 (14%), Positives = 138/487 (28%), Gaps = 169/487 (34%)
Query: 12 NKTILVSGVTGF-----VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKD 66
K +L+ GV G V + ++ + + K +L ++ + L ++L +
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ- 208
Query: 67 VFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNL--KEELWNELDIM--VNSAA 122
+ W +R + + K+ + + L + N L ++ V +A
Sbjct: 209 ----IDPNWTSRSDHSSNIKLRI-------HSIQAELRRLLKSKPYENCLLVLLNVQNAK 257
Query: 123 ITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFV-----HVSTAYVAGERTGLILENP 177
AF + C K+ + V+ A T + L++
Sbjct: 258 AWN-------AFNL-------------SC---KILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER---------------- 221
L + K L +K L
Sbjct: 295 SMT----------------LTPDEVKS-------LLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 222 ---AKLHGWPNTYVFTKTMG----EMLMQQSKENL----------SLVIIR-----PTVV 259
+ T+ K + +++ S L L + PT++
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Query: 260 SGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-----GETKVIMDV-------IPVDM 307
W + +K+ + V LV T I + + +
Sbjct: 392 LSLI------WFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVKLENEY 443
Query: 308 VVNAMIVAMVAHAK---------QPSDANIY-HVGSSLRNP-----VTLVSI--LDYGFV 350
++ IV K D Y H+G L+N +TL + LD+ F+
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503
Query: 351 YFTKKPWINKQGKPVKVSKIIL--FSSIASFHGYMQ-------------IRYLLPLK--- 392
+K I S IL + + Y+ + +L ++
Sbjct: 504 --EQK--IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 393 VCSKHKN 399
+CSK+ +
Sbjct: 560 ICSKYTD 566
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 8e-05
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV-AGER 169
I+++ AA TK D + D+A+ IN +G ++ A + V++ST YV G+R
Sbjct: 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNV---AVASQLVGAKLVYISTDYVFQGDR 114
Query: 170 TGLILE----NPL 178
E P+
Sbjct: 115 PEGYDEFHNPAPI 127
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 63 LAKDVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSA 121
L ++ +L E+ SE D++ L++ + D+++N+A
Sbjct: 12 LGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFP------RLEDFIIKKRPDVIINAA 65
Query: 122 AITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
A+T D + A+ IN V H+ + + VH+ST YV
Sbjct: 66 AMTDVDKCEIEKEKAYKINAEAVRHI---VRAGKVIDSYIVHISTDYV 110
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
++++N AA T D E+YD+A+ IN +G +L A + V +ST YV
Sbjct: 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNL---AAAAYSVGAEIVQISTDYV 116
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 41/168 (24%)
Query: 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFN 69
L N ++V G GFV ++++L N+V D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLE----------------------LGVNQVHVVDNLL 67
Query: 70 VLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT----- 124
++N + F I+ D L L +E D + + A
Sbjct: 68 S-----AEKINVPDHPAVRFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSS 115
Query: 125 KFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
D D NTL + L K +LK V+ + E+T
Sbjct: 116 IHDPLADHE--NNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD 161
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 115 DIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKV-FVHVSTAYV 165
D++VN+AA T D ++A +N V + AK + VH ST YV
Sbjct: 56 DVIVNAAAHTAVDKAESEPELAQLLNATSVEAI---AKAANETGAWVVHYSTDYV 107
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 399 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.98 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.98 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.98 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.98 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.98 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.98 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.98 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.97 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.96 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.96 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.96 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.96 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.95 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.95 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.94 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.94 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.93 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.93 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.92 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.92 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.91 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.9 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.9 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.89 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.88 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.88 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.88 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.88 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.87 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.87 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.86 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.86 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.86 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.86 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.86 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.85 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.85 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.84 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.84 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.84 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.84 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.84 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.84 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.84 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.84 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.84 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.84 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.84 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.84 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.84 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.84 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.84 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.84 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.84 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.84 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.84 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.84 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.84 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.83 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.83 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.83 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.83 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.83 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.83 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.83 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.83 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.83 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.83 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.83 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.83 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.83 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.83 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.83 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.83 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.82 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.82 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.82 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.82 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.82 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.82 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.82 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.82 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.82 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.82 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.82 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.82 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.82 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.82 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.82 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.82 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.82 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.82 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.82 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.82 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.82 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.82 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.82 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.82 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.82 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.82 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.82 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.81 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.81 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.81 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.81 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.81 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.81 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.81 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.81 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.81 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.81 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.81 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.81 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.81 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.81 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.81 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.81 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.81 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.81 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.81 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.81 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.8 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.8 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.8 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.8 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.8 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.8 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.8 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.8 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.8 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.8 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.8 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.8 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.8 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.8 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.8 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.8 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.8 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.8 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.8 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.79 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.79 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.79 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.79 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.79 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.79 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.79 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.79 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.79 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.79 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.79 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.79 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.79 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.79 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.79 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.79 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.79 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.79 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.79 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.78 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.78 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.78 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.78 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.78 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.78 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.78 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.78 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.78 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.78 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.78 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.77 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.77 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.77 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.77 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.77 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.77 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.77 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.77 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.77 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.77 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.76 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.76 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.76 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.76 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.76 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.76 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.76 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.75 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.75 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.75 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.75 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.75 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.74 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.74 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.74 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.74 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.74 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.73 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.73 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.73 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.72 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.72 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.71 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.71 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.7 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.7 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.7 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.69 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.69 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.69 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.69 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.69 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.68 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.67 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.66 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.65 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.62 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.56 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.53 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.53 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.53 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.48 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.48 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.48 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.33 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.27 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.25 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.24 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.24 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.19 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.16 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.14 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.13 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.99 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.66 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.65 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.47 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.47 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.41 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.36 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.32 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.31 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.1 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.03 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.95 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.94 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.9 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.89 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.82 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.7 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.68 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.67 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.66 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.64 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.64 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.56 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.28 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.13 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.06 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 96.86 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.77 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.77 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.73 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.73 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.73 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.68 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.64 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.59 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 96.58 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 96.49 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.48 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.47 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.41 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.41 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.35 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.33 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.31 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.31 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.29 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.28 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.24 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 96.18 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.13 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.13 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.11 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.06 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.06 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.02 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 95.96 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.96 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 95.94 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 95.94 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 95.93 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 95.89 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.88 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 95.88 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 95.86 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.84 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 95.81 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 95.8 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 95.73 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 95.72 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 95.71 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 95.62 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 95.61 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 95.54 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 95.54 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.52 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.51 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 95.49 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.43 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 95.42 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 95.41 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 95.36 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 95.31 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.3 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.21 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.17 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 94.98 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 94.97 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 94.95 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 94.95 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 94.95 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 94.86 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 94.84 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 94.83 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 94.81 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 94.77 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 94.76 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 94.72 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 94.66 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.65 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 94.65 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 94.51 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 94.47 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.4 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 94.39 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 94.29 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 94.27 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 94.22 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 94.18 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 94.05 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 93.96 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 93.89 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 93.81 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 93.79 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 93.77 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 93.75 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 93.74 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 93.73 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 93.72 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 93.66 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 93.66 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 93.61 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 93.6 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 93.51 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 93.48 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 93.46 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 93.39 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 93.33 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 93.32 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 93.08 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 92.96 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 92.91 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 92.75 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 92.71 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 92.64 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 92.54 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.54 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.54 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 92.37 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 92.31 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 92.27 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 92.16 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 92.08 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 91.99 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 91.97 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 91.93 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 91.84 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 91.75 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 91.74 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 91.65 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 91.62 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 91.59 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 91.58 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 91.56 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 91.56 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 91.28 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 91.27 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 91.16 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 91.14 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 91.02 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 90.83 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 90.79 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 90.76 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 90.69 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 90.49 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 90.38 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 90.33 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 90.31 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 90.26 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 90.23 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 90.15 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 90.15 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 89.96 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 89.96 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 89.93 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 89.89 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 89.88 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 89.84 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 89.82 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 89.78 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 89.69 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 89.54 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 89.51 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 89.48 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 89.47 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 89.41 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 89.37 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 89.29 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=277.86 Aligned_cols=269 Identities=19% Similarity=0.241 Sum_probs=208.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+.+|+|||||||||||++|+++|+++| ++|++++|+..... ....+.+. .......+
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNFSTGHQYNLDEVKTL-----------------VSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHT-----------------SCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCCCchhhhhhhhhc-----------------cccccCCc
Confidence 34678999999999999999999999999 56799999875432 22222210 00001158
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++++.+|++ +.+.+..+++++|+|||+|+.... ..++...+++|+.++.++++++++. ++++|||+||.
T Consensus 81 ~~~~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~ 152 (351)
T 3ruf_A 81 FCFIEGDIR-------DLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASS 152 (351)
T ss_dssp EEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEG
T ss_pred eEEEEccCC-------CHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecH
Confidence 999999999 556666888899999999997543 3456778999999999999999996 78999999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
++|+...+ .+++|+.+ ..+.+.|+.+|+++|++++
T Consensus 153 ~vyg~~~~----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~ 187 (351)
T 3ruf_A 153 STYGDHPA----LPKVEENI-----------------------------------------GNPLSPYAVTKYVNEIYAQ 187 (351)
T ss_dssp GGGTTCCC----SSBCTTCC-----------------------------------------CCCCSHHHHHHHHHHHHHH
T ss_pred HhcCCCCC----CCCccCCC-----------------------------------------CCCCChhHHHHHHHHHHHH
Confidence 99987643 22233221 2456789999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
.+ ..+++++++||+.|||+...+...+ ...+..++.....+....+++++++.++++|++|+|++++.++.....
T Consensus 188 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~ 264 (351)
T 3ruf_A 188 VYARTYGFKTIGLRYFNVFGRRQDPNGAY---AAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS 264 (351)
T ss_dssp HHHHHHCCCCEEEEECSEESTTCCCCSTT---CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG
T ss_pred HHHHHhCCCEEEEeeCceeCcCCCCCcch---hhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc
Confidence 87 5589999999999999987432111 133455667777777777778888999999999999999999874222
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.. +++||++++ .++|+.|+++.+++.+|..+
T Consensus 265 ~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 265 AK--DNIYNVAVG--DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp GC--SEEEEESCS--CCEEHHHHHHHHHHHHHTTC
T ss_pred cC--CCEEEeCCC--CcccHHHHHHHHHHHhCccc
Confidence 22 689999998 77999999999999999843
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=273.51 Aligned_cols=260 Identities=22% Similarity=0.277 Sum_probs=198.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|||||||||||++|+++|+++|++ ..|.++.|....... ..+.. -....++++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~~~~~~~~~-~~l~~--------------------~~~~~~~~~ 79 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYET-YKIINFDALTYSGNL-NNVKS--------------------IQDHPNYYF 79 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTT-EEEEEEECCCTTCCG-GGGTT--------------------TTTCTTEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCC-cEEEEEeccccccch-hhhhh--------------------hccCCCeEE
Confidence 67799999999999999999999999976 366777766422211 00000 001258999
Q ss_pred EeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+.+|++ +.+.+..++++ +|+|||+|+..... ..+..++++|+.++.++++++++. ++++|||+||.+
T Consensus 80 ~~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 151 (346)
T 4egb_A 80 VKGEIQ-------NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE 151 (346)
T ss_dssp EECCTT-------CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG
T ss_pred EEcCCC-------CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH
Confidence 999999 55556566665 99999999987543 566778999999999999999996 889999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+|+.... ..+++|+.+ ..+.+.|+.+|+++|++++.
T Consensus 152 vy~~~~~---~~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~ 187 (346)
T 4egb_A 152 VYGSLGK---TGRFTEETP-----------------------------------------LAPNSPYSSSKASADMIALA 187 (346)
T ss_dssp GGCCCCS---SCCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCc---CCCcCCCCC-----------------------------------------CCCCChhHHHHHHHHHHHHH
Confidence 9997531 122333222 24567899999999999998
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ ..+++++++||+.|||+...+ ...+..++.....+....+++++.+.++++|++|+|++++.++....
T Consensus 188 ~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-- 258 (346)
T 4egb_A 188 YYKTYQLPVIVTRCSNNYGPYQYP-------EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-- 258 (346)
T ss_dssp HHHHHCCCEEEEEECEEESTTCCT-------TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHhCCCEEEEeecceeCcCCCc-------cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--
Confidence 7 459999999999999988632 13344566777777766677888899999999999999999998543
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
. +++||++++ +++|+.|+++.+.+.+|.+.
T Consensus 259 ~--g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 259 V--GEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp T--TCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred C--CCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 2 689999998 77999999999999999754
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=264.28 Aligned_cols=245 Identities=17% Similarity=0.137 Sum_probs=196.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++|+++|+++| ++|++++|+..... . .+++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~-----------------------------~~~~~~~ 48 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTRSIGNKA-I-----------------------------NDYEYRV 48 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCC-----------------------------------CCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCCccc-C-----------------------------CceEEEE
Confidence 4799999999999999999999999 56799999843221 1 3788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|++ + +.+..+++++|+|||+|+..... ++...++.|+.++.++++++++. ++++|||+||.++|+....
T Consensus 49 ~Dl~-~-------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~ 118 (311)
T 3m2p_A 49 SDYT-L-------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETS 118 (311)
T ss_dssp CCCC-H-------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGG
T ss_pred cccc-H-------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCC
Confidence 9988 4 23346778999999999987655 56677899999999999999996 7899999999999996542
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCCC
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~ 249 (399)
.+++|+.+ ..+.+.|+.+|+++|++++.+ ..++
T Consensus 119 ----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~~~g~ 153 (311)
T 3m2p_A 119 ----LPWNEKEL-----------------------------------------PLPDLMYGVSKLACEHIGNIYSRKKGL 153 (311)
T ss_dssp ----CSBCTTSC-----------------------------------------CCCSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ----CCCCCCCC-----------------------------------------CCCCchhHHHHHHHHHHHHHHHHHcCC
Confidence 22222221 244678999999999999987 4799
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.|||+...+. ..+..++.....+....+++++++.++++|++|+|++++.++.... .+++|
T Consensus 154 ~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~ 222 (311)
T 3m2p_A 154 CIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK----VSGTF 222 (311)
T ss_dssp EEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT----CCEEE
T ss_pred CEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC----CCCeE
Confidence 999999999999887321 3344566777777777777888899999999999999999987432 26899
Q ss_pred EecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 330 HVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
|++++ .++|+.|+++.+++.+|.++.
T Consensus 223 ~i~~~--~~~s~~e~~~~i~~~~g~~~~ 248 (311)
T 3m2p_A 223 NIGSG--DALTNYEVANTINNAFGNKDN 248 (311)
T ss_dssp EECCS--CEECHHHHHHHHHHHTTCTTC
T ss_pred EeCCC--CcccHHHHHHHHHHHhCCCCc
Confidence 99998 779999999999999997653
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=270.91 Aligned_cols=264 Identities=19% Similarity=0.161 Sum_probs=200.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHH--hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILR--VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~--~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..+.+|+|||||||||||++|+++|++ .| ++|++++|.........+..+.+ .........
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~ 68 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSNTLFSNNRPSSL--------------GHFKNLIGF 68 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEECCCCC-------CCCC--------------CCGGGGTTC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEECCCccccccccchhhh--------------hhhhhcccc
Confidence 457789999999999999999999999 88 66799998765211100000000 000111235
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHH-hcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++.++.+|++ +.+.+..+ ..++|+|||+||.... ...+...+++|+.++.++++++++. +++ |||+||.
T Consensus 69 ~~~~~~~Dl~-------d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~ 139 (362)
T 3sxp_A 69 KGEVIAADIN-------NPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSA 139 (362)
T ss_dssp CSEEEECCTT-------CHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEG
T ss_pred CceEEECCCC-------CHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcH
Confidence 7789999999 45556566 6789999999997664 4678889999999999999999986 666 9999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
++|+.....++|+ . +..+.+.|+.+|+++|++++
T Consensus 140 ~vyg~~~~~~~E~-----~-----------------------------------------~~~p~~~Y~~sK~~~E~~~~ 173 (362)
T 3sxp_A 140 GVYGNTKAPNVVG-----K-----------------------------------------NESPENVYGFSKLCMDEFVL 173 (362)
T ss_dssp GGGCSCCSSBCTT-----S-----------------------------------------CCCCSSHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCC-----C-----------------------------------------CCCCCChhHHHHHHHHHHHH
Confidence 9999765433333 2 12456789999999999999
Q ss_pred HhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 244 QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 244 ~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
.+...++++++||++|||+...+... ....+..++.....+....+++++.+.++++|++|+|++++.++... ..
T Consensus 174 ~~~~~~~~~~lR~~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~--~~ 248 (362)
T 3sxp_A 174 SHSNDNVQVGLRYFNVYGPREFYKEK---TASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ--KS 248 (362)
T ss_dssp HTTTTSCEEEEEECSEESTTCGGGGG---GSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS--SC
T ss_pred HHhccCCEEEEEeCceeCcCCCCCCc---chhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC--CC
Confidence 88333899999999999998733111 11334556667777777667778888999999999999999998732 22
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
+ +||++++ .++|+.|+++.+++.+|
T Consensus 249 --g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 249 --G-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp --E-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred --C-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 4 9999998 77999999999999999
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=270.67 Aligned_cols=271 Identities=17% Similarity=0.177 Sum_probs=204.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+.+|+|||||||||||++|+++|+++ | ++|++++|+........ ...+
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~--------------------------~~~~ 70 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTD---WEVFGMDMQTDRLGDLV--------------------------KHER 70 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSS---CEEEEEESCCTTTGGGG--------------------------GSTT
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCC---CEEEEEeCChhhhhhhc--------------------------cCCC
Confidence 4467799999999999999999999999 8 56799999875432210 1268
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
++++.+|+++ +.+.+..+++++|+|||+|+.... ..++...+++|+.++.++++++++. + ++|||+||.
T Consensus 71 v~~~~~Dl~~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~ 142 (372)
T 3slg_A 71 MHFFEGDITI------NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTS 142 (372)
T ss_dssp EEEEECCTTT------CHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCG
T ss_pred eEEEeCccCC------CHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcH
Confidence 9999999993 345555677899999999998754 2466778899999999999999987 5 899999999
Q ss_pred eeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 164 YVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 164 ~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
++|+...+ .+.|..... .......+.+.|+.+|+++|+++
T Consensus 143 ~vyg~~~~~~~~e~~~~~---------------------------------------~~~p~~~p~~~Y~~sK~~~E~~~ 183 (372)
T 3slg_A 143 EVYGMCADEQFDPDASAL---------------------------------------TYGPINKPRWIYACSKQLMDRVI 183 (372)
T ss_dssp GGGBSCCCSSBCTTTCCE---------------------------------------EECCTTCTTHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCcccccc---------------------------------------ccCCCCCCCCcHHHHHHHHHHHH
Confidence 99997543 233332100 00001134458999999999999
Q ss_pred HHh-hCCCcEEEEecCceecCCCCCCCCcc-cCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 243 QQS-KENLSLVIIRPTVVSGTYKEPFPGWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 243 ~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
+.+ ..+++++++||+.|||+...+..+.. .....+..++.....+....+++++.+.++++|++|+|++++.++....
T Consensus 184 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 263 (372)
T 3slg_A 184 WGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN 263 (372)
T ss_dssp HHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred HHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc
Confidence 988 33899999999999999874321111 1223455666777777777777888899999999999999999998543
Q ss_pred CCCCCCcEEEecC-CCCCcccHHHHHHHHHHhhccCCC
Q 015874 321 KQPSDANIYHVGS-SLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 321 ~~~~~~~~yni~~-~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
... .+++||+++ + +++|+.|+++.+++.+|..+.
T Consensus 264 ~~~-~~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 264 GVA-TGKIYNIGNPN--NNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp GTT-TTEEEEECCTT--CEEEHHHHHHHHHHHHHHCTT
T ss_pred CcC-CCceEEeCCCC--CCccHHHHHHHHHHHhCCCcc
Confidence 111 268999999 5 579999999999999997643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=266.68 Aligned_cols=259 Identities=16% Similarity=0.146 Sum_probs=196.2
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+..++|+|||||||||||++|++.|+++|+ +|++++|+... .+
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~---------------------------------~~ 57 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGR---TVRGFDLRPSG---------------------------------TG 57 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTC---CEEEEESSCCS---------------------------------SC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCC---------------------------------CC
Confidence 4567789999999999999999999999994 56888887643 36
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
+.++.+|++ +.+.+..+++++|+|||+|+..... .....++++|+.++.++++++++. ++++|||+||.++
T Consensus 58 ~~~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~v 129 (347)
T 4id9_A 58 GEEVVGSLE-------DGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEV 129 (347)
T ss_dssp CSEEESCTT-------CHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred ccEEecCcC-------CHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHH
Confidence 788999999 5566667888999999999987654 345788999999999999999986 7899999999999
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
|+.... ...+++|+. +..+.+.|+.+|+++|++++.+
T Consensus 130 yg~~~~--~~~~~~E~~-----------------------------------------~~~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 130 YPENRP--EFLPVTEDH-----------------------------------------PLCPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp TTTTSC--SSSSBCTTS-----------------------------------------CCCCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC--CCCCcCCCC-----------------------------------------CCCCCChHHHHHHHHHHHHHHH
Confidence 997311 112222222 2245678999999999999977
Q ss_pred --hCCCcEEEEecCcee-------------cCCCCCCCCcc----cCcchHHHHHHHhhcCccccccCCCccccCe----
Q 015874 246 --KENLSLVIIRPTVVS-------------GTYKEPFPGWV----EDLKTINTLFVASAQGNLRCLVGETKVIMDV---- 302 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~-------------G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 302 (399)
..+++++++||+.|| |+...+...+. .....+..++.....+....+++++++.+++
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 568999999999999 65431100000 0013344556666777666677778888999
Q ss_pred eeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 303 i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
+|++|+|++++.++...... +++||++++ .++|+.|+++.+++.+|.+..
T Consensus 247 i~v~Dva~ai~~~~~~~~~~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPEAA---GGTFNLGAD--EPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp EEHHHHHHHHHHHHHCGGGT---TEEEEESCS--SCEEHHHHHHHHHHHHCCCEE
T ss_pred EeHHHHHHHHHHHhcCcccC---CCeEEECCC--CcccHHHHHHHHHHHhCCCCc
Confidence 99999999999999854222 689999998 779999999999999987543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-32 Score=260.28 Aligned_cols=249 Identities=15% Similarity=0.169 Sum_probs=189.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++| ++|+++.|........ ...+++++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------------~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRREF---------------------------VNPSAELHVR 50 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSCCGGG---------------------------SCTTSEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCCchhh---------------------------cCCCceEEEC
Confidence 689999999999999999999999 5678888876543111 1367889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
|+++++ +...+++ |+|||+|+.... ...+...+++|+.++.++++++++. ++++|||+||.++|+..
T Consensus 51 Dl~d~~--------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 51 DLKDYS--------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp CTTSTT--------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSC
T ss_pred ccccHH--------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCC
Confidence 999643 2244455 999999996532 3567788999999999999999986 78999999999999975
Q ss_pred CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 170 ~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
.+ .++|+ . +..+.+.|+.+|+++|.+++.+ +
T Consensus 121 ~~~~~~e~-----~-----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~~~~ 154 (312)
T 3ko8_A 121 DVIPTPEE-----E-----------------------------------------PYKPISVYGAAKAAGEVMCATYARL 154 (312)
T ss_dssp SSSSBCTT-----S-----------------------------------------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC-----C-----------------------------------------CCCCCChHHHHHHHHHHHHHHHHHH
Confidence 42 22222 2 1245678999999999999887 4
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcC-ccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
.+++++++||+.|||+.... ..+..++.+...+ ....+.+++.+.++++|++|+|++++.++.........
T Consensus 155 ~g~~~~~lrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 226 (312)
T 3ko8_A 155 FGVRCLAVRYANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226 (312)
T ss_dssp HCCEEEEEEECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred hCCCEEEEeeccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence 59999999999999987631 2233455555554 33345677888999999999999999999851111112
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
+++||++++ .++|+.|+++.+.+.+|.++.
T Consensus 227 ~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 256 (312)
T 3ko8_A 227 FLALNVGNV--DAVRVLDIAQIVAEVLGLRPE 256 (312)
T ss_dssp EEEEEESCS--SCEEHHHHHHHHHHHHTCCCE
T ss_pred CcEEEEcCC--CceeHHHHHHHHHHHhCCCCc
Confidence 689999998 779999999999999997653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=261.02 Aligned_cols=251 Identities=14% Similarity=0.087 Sum_probs=190.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
++.+|+|||||||||||++|+++|+++|+ +.... ...++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~~--------------------------------~~~~~ 41 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGED--------------------------------WVFVS 41 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTCE--------------------------------EEECC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------ccccc--------------------------------ccccC
Confidence 36789999999999999999999999984 11110 12445
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
++.+|++ +.+.+..++++ +|+|||+|+.... .+.+...+++|+.++.++++++++. ++++|||+||
T Consensus 42 ~~~~D~~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS 113 (319)
T 4b8w_A 42 SKDADLT-------DTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLS 113 (319)
T ss_dssp TTTCCTT-------SHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred ceecccC-------CHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Confidence 5688999 45555566665 9999999998652 3567788999999999999999996 7899999999
Q ss_pred ceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hhhHhHHHHHH
Q 015874 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEM 240 (399)
Q Consensus 163 ~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~ 240 (399)
.++|+...+ .++|+.... .+..+.+ +|+.+|+++|+
T Consensus 114 ~~vyg~~~~~~~~E~~~~~------------------------------------------~~~~p~~~~Y~~sK~~~E~ 151 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHN------------------------------------------GPPHNSNFGYSYAKRMIDV 151 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGB------------------------------------------SCCCSSSHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCcccccccc------------------------------------------CCCCCCcchHHHHHHHHHH
Confidence 999997543 344442100 0112233 59999999999
Q ss_pred HHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHH----hhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVA----SAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 241 ~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+++.+ ..+++++++||+.|||+...+... ....+..++.. ...+....+++++.+.++++|++|+|++++.
T Consensus 152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 152 QNRAYFQQYGCTFTAVIPTNVFGPHDNFNIE---DGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCCCTT---TSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeeccccCCCCCCCCc---cccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 99887 568999999999999998743211 11223334444 5667766777888899999999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
++....... +++||++++ .++|+.|+++.+.+.+|.+..
T Consensus 229 ~~~~~~~~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 267 (319)
T 4b8w_A 229 VLREYNEVE--PIILSVGEE--DEVSIKEAAEAVVEAMDFHGE 267 (319)
T ss_dssp HHHHCCCSS--CEEECCCGG--GCEEHHHHHHHHHHHTTCCSC
T ss_pred HHhccccCC--ceEEEecCC--CceeHHHHHHHHHHHhCCCCc
Confidence 998533322 579999998 779999999999999997543
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=258.59 Aligned_cols=266 Identities=17% Similarity=0.170 Sum_probs=195.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.+|+|||||||||||++++++|+++| ++|.++.|+....... +++... .+.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~---------------------~~~~~~~ 59 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG---YDVVIADNLVNSKREAIARIEKI---------------------TGKTPAF 59 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSSCTHHHHHHHHH---------------------HSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEecCCcchHHHHHHHHhh---------------------cCCCceE
Confidence 46899999999999999999999999 5678888876654322 222110 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+.+|++ +.+.+..+++ ++|+|||+||.... .......++.|+.++.++++++++. ++++||++||.+
T Consensus 60 ~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 60 HETDVS-------DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT 131 (341)
T ss_dssp ECCCTT-------CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEeecC-------CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce
Confidence 999999 4555556666 89999999998653 3455678899999999999999986 788999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+|+.... .+++|+.+ ..+.+.|+.+|+++|++++.
T Consensus 132 ~~g~~~~----~~~~e~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~ 166 (341)
T 3enk_A 132 VYGVPER----SPIDETFP-----------------------------------------LSATNPYGQTKLMAEQILRD 166 (341)
T ss_dssp GBCSCSS----SSBCTTSC-----------------------------------------CBCSSHHHHHHHHHHHHHHH
T ss_pred EecCCCC----CCCCCCCC-----------------------------------------CCCCChhHHHHHHHHHHHHH
Confidence 9986542 12222221 23457899999999999987
Q ss_pred h--hC-CCcEEEEecCceecCCCCCCCCcccC--cchHHHHHHHhhcCc--cccccC------CCccccCeeeHHHHHHH
Q 015874 245 S--KE-NLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGN--LRCLVG------ETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 245 ~--~~-~~~~~i~Rp~~V~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~~ 311 (399)
+ .. +++++++||+.|||+......+.... ...+..++.....+. ...+++ ++.+.++++|++|+|++
T Consensus 167 ~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a 246 (341)
T 3enk_A 167 VEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARG 246 (341)
T ss_dssp HHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHH
T ss_pred HhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHH
Confidence 7 33 59999999999999875322111110 122223444444332 222334 67889999999999999
Q ss_pred HHHHHHhcc-CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 312 MIVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 312 i~~~~~~~~-~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
++.++.... ... +++||++++ +++|+.|+++.+.+.+|.+..
T Consensus 247 ~~~~~~~~~~~~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 289 (341)
T 3enk_A 247 HIAALDALERRDA--SLTVNLGTG--RGYSVLEVVRAFEKASGRAVP 289 (341)
T ss_dssp HHHHHHHHHHHTS--CEEEEESCS--CCEEHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHhhhcCCc--ceEEEeCCC--CceeHHHHHHHHHHHhCCCcc
Confidence 999987521 112 689999998 779999999999999997543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=259.33 Aligned_cols=257 Identities=23% Similarity=0.273 Sum_probs=192.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc--ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI--DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
|.+|+|||||||||||++++++|+++|+. ++|+++.|.... ...+..+ . ...++
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~~~~~~~---------------------~--~~~~~ 56 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNPANLKDL---------------------E--DDPRY 56 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGGTTT---------------------T--TCTTE
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCchhHHhhh---------------------c--cCCce
Confidence 34689999999999999999999999743 467888886421 1111000 0 02578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++.+|++ +.+.+..++.++|+|||+||.... ..++..++++|+.++.++++++.+....++|||+||.+
T Consensus 57 ~~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~ 129 (336)
T 2hun_A 57 TFVKGDVA-------DYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDE 129 (336)
T ss_dssp EEEECCTT-------CHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred EEEEcCCC-------CHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHH
Confidence 99999999 455555677899999999998653 24567789999999999999999863347999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+||.... .+++|+. +..+.+.|+.+|.++|.+++.
T Consensus 130 vyg~~~~----~~~~E~~-----------------------------------------~~~~~~~Y~~sK~~~e~~~~~ 164 (336)
T 2hun_A 130 VYGDILK----GSFTEND-----------------------------------------RLMPSSPYSATKAASDMLVLG 164 (336)
T ss_dssp GGCCCSS----SCBCTTB-----------------------------------------CCCCCSHHHHHHHHHHHHHHH
T ss_pred HHCCCCC----CCcCCCC-----------------------------------------CCCCCCccHHHHHHHHHHHHH
Confidence 9986531 2222222 123457899999999999988
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ +.+++++++||+.|||+...+ . ..+..++.....+....+++++.+.++++|++|+|++++.++....
T Consensus 165 ~~~~~~~~~~ilrp~~v~g~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-- 235 (336)
T 2hun_A 165 WTRTYNLNASITRCTNNYGPYQFP-E------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-- 235 (336)
T ss_dssp HHHHTTCEEEEEEECEEESTTCCT-T------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHhCCCEEEEeeeeeeCcCCCc-C------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence 7 568999999999999988632 1 2233455566666655556777888999999999999999987432
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
. +++||++++ .++|+.|+++.+++.+|..
T Consensus 236 ~--g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 236 S--REIYNISAG--EEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp T--TCEEEECCS--CEECHHHHHHHHHHHTTCC
T ss_pred C--CCEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 2 679999998 7799999999999999875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-32 Score=259.54 Aligned_cols=246 Identities=18% Similarity=0.203 Sum_probs=189.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++| . .|.+..|+...... ...++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~--~v~~~~~~~~~~~~----------------------------~~~~~~~~~~ 50 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-E--IVVIDNLSSGNEEF----------------------------VNEAARLVKA 50 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-C--EEEECCCSSCCGGG----------------------------SCTTEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-C--EEEEEcCCCCChhh----------------------------cCCCcEEEEC
Confidence 689999999999999999999998 2 23433333332211 1357889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
|+++ +.+..+++++|+|||+|+.... .+.+...+++|+.++.++++++++. ++++|||+||.++|+..
T Consensus 51 Dl~~--------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~ 121 (313)
T 3ehe_A 51 DLAA--------DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEA 121 (313)
T ss_dssp CTTT--------SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSC
T ss_pred cCCh--------HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcC
Confidence 9994 3334667799999999996532 3677889999999999999999986 78899999999999975
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~ 247 (399)
.+ .+++|+. +..+.+.|+.+|.++|.+++.+ ..
T Consensus 122 ~~----~~~~E~~-----------------------------------------~~~~~~~Y~~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 122 KV----IPTPEDY-----------------------------------------PTHPISLYGASKLACEALIESYCHTF 156 (313)
T ss_dssp SS----SSBCTTS-----------------------------------------CCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CCCCCCC-----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 42 1222221 1244578999999999999987 56
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcC-ccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
+++++++||+.|||+.... ..+..++.....+ ....+.+++.+.++++|++|+|++++.++. ... .+
T Consensus 157 g~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-~~~---~~ 224 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTH--------GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-GDE---RV 224 (313)
T ss_dssp TCEEEEEECSCEESTTCCC--------SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-CCS---SE
T ss_pred CCCEEEEeeccccCcCCCc--------ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-cCC---CC
Confidence 9999999999999987632 2334455555555 333466888899999999999999999987 221 16
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
++||++++ +++|+.|+++.+++.+|.++.
T Consensus 225 ~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 253 (313)
T 3ehe_A 225 NIFNIGSE--DQIKVKRIAEIVCEELGLSPR 253 (313)
T ss_dssp EEEECCCS--CCEEHHHHHHHHHHHTTCCCE
T ss_pred ceEEECCC--CCeeHHHHHHHHHHHhCCCCc
Confidence 89999998 779999999999999997653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-31 Score=259.34 Aligned_cols=268 Identities=17% Similarity=0.181 Sum_probs=201.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|||||||||||++++++|+++| ++|++++|+.... ...+.+.+.+ ......++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 83 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSLV-----------------SEKQWSNF 83 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHS-----------------CHHHHTTE
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCccchhhHHHHhhhc-----------------ccccCCce
Confidence 4778999999999999999999999999 5678999876432 1222221110 00012578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
.++.+|++ +.+.+..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. ++++|||+||.+
T Consensus 84 ~~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~ 155 (352)
T 1sb8_A 84 KFIQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSS 155 (352)
T ss_dssp EEEECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred EEEECCCC-------CHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHH
Confidence 99999999 455566778899999999997653 2567788999999999999999986 789999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+|+...+ .+++|+.+ ..+.+.|+.+|+.+|.+++.
T Consensus 156 ~~~~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~ 190 (352)
T 1sb8_A 156 TYGDHPG----LPKVEDTI-----------------------------------------GKPLSPYAVTKYVNELYADV 190 (352)
T ss_dssp GGTTCCC----SSBCTTCC-----------------------------------------CCCCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCC----CCCCCCCC-----------------------------------------CCCCChhHHHHHHHHHHHHH
Confidence 9986542 12222221 23457899999999999987
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ ..+++++++||+.|||+...+...+ ...+..++.....+....+++++.+.++++|++|+|++++.++......
T Consensus 191 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 267 (352)
T 1sb8_A 191 FSRCYGFSTIGLRYFNVFGRRQDPNGAY---AAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDA 267 (352)
T ss_dssp HHHHHCCCCEEEEECCEECTTCCCCSTT---CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG
T ss_pred HHHHcCCCEEEEEECceeCcCCCCCcch---hhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccC
Confidence 6 4589999999999999886331111 1223345556666666666788888999999999999999988642221
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhh---ccCC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYF---TKKP 356 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~---~~~~ 356 (399)
. +++||++++ .++|+.|+++.+++.+ |.+.
T Consensus 268 ~--~~~~ni~~~--~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 268 R--NQVYNIAVG--GRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp C--SEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCC
T ss_pred C--CceEEeCCC--CCccHHHHHHHHHHHHHhcCCCC
Confidence 2 689999998 7799999999999999 7654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-31 Score=255.05 Aligned_cols=255 Identities=16% Similarity=0.154 Sum_probs=189.4
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+-.+.+.|+|||||||||||++++++|+++| ++|++++|+.... .
T Consensus 5 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~-~------------------------------ 50 (321)
T 2pk3_A 5 HHHHHHGSMRALITGVAGFVGKYLANHLTEQN---VEVFGTSRNNEAK-L------------------------------ 50 (321)
T ss_dssp --------CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCTTCC-C------------------------------
T ss_pred ccccccCcceEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCccc-c------------------------------
Confidence 34455667899999999999999999999999 5678888876431 0
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.++.++.+|+++ .+.+..++++ +|+|||+||.... .+.+...+++|+.++.++++++.+..++++|||
T Consensus 51 l~~~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~ 123 (321)
T 2pk3_A 51 PNVEMISLDIMD-------SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 123 (321)
T ss_dssp TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred ceeeEEECCCCC-------HHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 157889999994 4445455554 9999999998653 246788899999999999999977535899999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.++|+.... ...+++|+.+ ..+.+.|+.+|+++|
T Consensus 124 ~SS~~v~g~~~~--~~~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~E 160 (321)
T 2pk3_A 124 IGSSEEYGMILP--EESPVSEENQ-----------------------------------------LRPMSPYGVSKASVG 160 (321)
T ss_dssp EEEGGGTBSCCG--GGCSBCTTSC-----------------------------------------CBCCSHHHHHHHHHH
T ss_pred EccHHhcCCCCC--CCCCCCCCCC-----------------------------------------CCCCCccHHHHHHHH
Confidence 999999986410 1122232221 234578999999999
Q ss_pred HHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhc---C--ccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ---G--NLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+++.+ +.+++++++||+.|||+.... . ..+..++..... | ....+.+++.+.++++|++|+|+++
T Consensus 161 ~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~ 233 (321)
T 2pk3_A 161 MLARQYVKAYGMDIIHTRTFNHIGPGQSL-G------FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY 233 (321)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECTTCCT-T------SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCcccCcCCCC-C------chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHH
Confidence 999887 458999999999999988632 1 122234444433 5 3444567777889999999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.++.... . +++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 234 ~~~~~~~~--~--g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 271 (321)
T 2pk3_A 234 WLLSQYGK--T--GDVYNVCSG--IGTRIQDVLDLLLAMANVKI 271 (321)
T ss_dssp HHHHHHCC--T--TCEEEESCS--CEEEHHHHHHHHHHHSSSCC
T ss_pred HHHHhCCC--C--CCeEEeCCC--CCeeHHHHHHHHHHHhCCCC
Confidence 99997542 2 579999998 77999999999999998753
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.5e-31 Score=261.06 Aligned_cols=259 Identities=15% Similarity=0.065 Sum_probs=197.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|||||||||||++|+++|+++| ++|++++|+....... ...+++++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------------~~~~v~~~ 77 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMTE---------------------------DMFCDEFH 77 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEECCCccchhh---------------------------ccCCceEE
Confidence 56899999999999999999999999 5679999986543111 02478899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
.+|++ +.+.+..+++++|+|||+|+.... ...+...+++|+.++.++++++++. ++++|||+||.++|
T Consensus 78 ~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 78 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 149 (379)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred ECCCC-------CHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehhee
Confidence 99999 555566778899999999997653 4567888999999999999999986 78999999999999
Q ss_pred cCcCCcccc-ccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTGLILE-NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+.......+ ..++|+.+ .+..+.+.|+.+|+.+|++++.+
T Consensus 150 ~~~~~~~~~~~~~~E~~~---------------------------------------~~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDA---------------------------------------WPAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp CGGGSSSSSSCEECGGGG---------------------------------------SSBCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCCCcCcccC---------------------------------------CCCCCCChhHHHHHHHHHHHHHH
Confidence 864321000 11111110 01234578999999999999876
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc-ccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++++||+.|||+...+..+. ...+..++.....+.. ..+++++.+.++++|++|+|++++.++... .
T Consensus 191 ~~~~gi~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~- 265 (379)
T 2c5a_A 191 NKDFGIECRIGRFHNIYGPFGTWKGGR---EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F- 265 (379)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSC---CCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C-
T ss_pred HHHHCCCEEEEEeCceeCcCCCccccc---ccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-C-
Confidence 4589999999999999876432211 1234455656655554 445677788999999999999999999743 1
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ +++|+.|+++.+.+.+|.+.
T Consensus 266 ---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 294 (379)
T 2c5a_A 266 ---REPVNIGSD--EMVSMNEMAEMVLSFEEKKL 294 (379)
T ss_dssp ---CSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred ---CCeEEeCCC--CccCHHHHHHHHHHHhCCCC
Confidence 568999998 77999999999999998654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-31 Score=261.70 Aligned_cols=263 Identities=19% Similarity=0.168 Sum_probs=192.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|||||||||||++|+++|+++| ++ |++++|+....... +. ...++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~-----------------------l~--~~~~v 80 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQ---VHVVDNLLSAEKIN-----------------------VP--DHPAV 80 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSE---EEEECCCTTCCGGG-----------------------SC--CCTTE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCce---EEEEECCCCCchhh-----------------------cc--CCCce
Confidence 4778999999999999999999999998 54 58888876432100 00 02578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++.+|++ +.+.+..+++++|+|||+|+..... .++...+++|+.++.++++++++..++++|||+||.+
T Consensus 81 ~~~~~Dl~-------d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~ 153 (377)
T 2q1s_A 81 RFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC 153 (377)
T ss_dssp EEECSCTT-------CHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-
T ss_pred EEEECCCC-------CHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH
Confidence 99999999 4555657778999999999986542 4677889999999999999998842678999999999
Q ss_pred eecCcCC-ccc--cccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC-CCCchhhHhHHHHHH
Q 015874 165 VAGERTG-LIL--ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH-GWPNTYVFTKTMGEM 240 (399)
Q Consensus 165 v~~~~~~-~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~E~ 240 (399)
+|+...+ .+. |..+. .+. .+.+.|+.+|+++|+
T Consensus 154 vyg~~~~~~~~~~E~~~~-------------------------------------------~~~~~~~~~Y~~sK~~~E~ 190 (377)
T 2q1s_A 154 SIAEKTFDDAKATEETDI-------------------------------------------VSLHNNDSPYSMSKIFGEF 190 (377)
T ss_dssp -------------CCCCC-------------------------------------------CCSSCCCSHHHHHHHHHHH
T ss_pred HcCCCCCCCcCccccccc-------------------------------------------ccccCCCCchHHHHHHHHH
Confidence 9986542 222 32110 011 335789999999999
Q ss_pred HHHHh--hCCCcEEEEecCceecCCCCCCCC-cccC-----cchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH-
Q 015874 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPG-WVED-----LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA- 311 (399)
Q Consensus 241 ~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~- 311 (399)
+++.+ ..+++++++||+.|||+.....+| |... ...+..++.....+....+++++++.++++|++|+|++
T Consensus 191 ~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~ 270 (377)
T 2q1s_A 191 YSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGL 270 (377)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHH
Confidence 99877 458999999999999987621111 1100 13345566666777665666777889999999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++.++.... . + +||++++ +++|+.|+++.+++.+|.+.
T Consensus 271 i~~~~~~~~--~--g-~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 308 (377)
T 2q1s_A 271 IACAADGTP--G--G-VYNIASG--KETSIADLATKINEITGNNT 308 (377)
T ss_dssp HHHHHHCCT--T--E-EEECCCC--CCEEHHHHHHHHHHHHTCCS
T ss_pred HHHHHhcCC--C--C-eEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 998887422 2 5 9999998 77999999999999999754
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=254.17 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=195.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+|+|||||||||||++++++|+++ | ++|++++|....... +. +......++++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~-~~---------------------~~~~~~~~~~~ 58 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGNK-AN---------------------LEAILGDRVEL 58 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTT---CEEEEEECCCTTCCG-GG---------------------TGGGCSSSEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCC---CEEEEEeCCCCCCCh-hH---------------------HhhhccCCeEE
Confidence 479999999999999999999999 6 567899887532110 00 00111257899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+.+|++ +.+.+..+++++|+|||+|+.... ..+++..+++|+.++.++++++.+. ++ +|||+||.++|
T Consensus 59 ~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vy 129 (348)
T 1oc2_A 59 VVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVY 129 (348)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGG
T ss_pred EECCCC-------CHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEeccccee
Confidence 999999 556666788899999999998653 2456778999999999999999986 66 99999999999
Q ss_pred cCcCCc--------cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 167 GERTGL--------ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 167 ~~~~~~--------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
|..... ..+.+++|+. +..+.+.|+.+|+.+
T Consensus 130 g~~~~~~~~~~~~~~~~~~~~E~~-----------------------------------------~~~~~~~Y~~sK~~~ 168 (348)
T 1oc2_A 130 GDLPLREDLPGHGEGPGEKFTAET-----------------------------------------NYNPSSPYSSTKAAS 168 (348)
T ss_dssp CCBCCGGGSTTTTCSTTSSBCTTS-----------------------------------------CCCCCSHHHHHHHHH
T ss_pred CCCcccccccccccccCCCcCCCC-----------------------------------------CCCCCCccHHHHHHH
Confidence 864210 0012222222 224457899999999
Q ss_pred HHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 239 E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
|.+++.+ ..+++++++||+.|||+...+ . ..+..++.....+....+++++.+.++++|++|+|++++.++
T Consensus 169 e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 241 (348)
T 1oc2_A 169 DLIVKAWVRSFGVKATISNCSNNYGPYQHI-E------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL 241 (348)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCEESTTCCT-T------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeeceeeCCCCCc-c------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHh
Confidence 9999887 458999999999999988632 1 223345556666665566677788999999999999999998
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.... . +++||++++ .++|+.|+++.+.+.+|...
T Consensus 242 ~~~~--~--g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 242 TKGR--M--GETYLIGAD--GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp HHCC--T--TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred hCCC--C--CCeEEeCCC--CCCCHHHHHHHHHHHhCCCc
Confidence 7432 2 679999998 77999999999999998753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.4e-31 Score=255.56 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=193.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCc--CeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNV--KKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V--~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
|+|||||||||||++++++|+++ ++.+ ++|++++|..... ..+..+ . ...++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~---------------------~--~~~~~ 57 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV---------------------D--ADPRL 57 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG---------------------T--TCTTE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc---------------------c--cCCCe
Confidence 68999999999999999999996 3221 3568888865321 111000 0 12578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++.+|++ +.+.+..++.++|+|||+|+.... ..+++..+++|+.++.++++++.+. ++++|||+||.+
T Consensus 58 ~~~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~ 129 (337)
T 1r6d_A 58 RFVHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQ 129 (337)
T ss_dssp EEEECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEEEcCCC-------CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchH
Confidence 99999999 455565777899999999997653 2456778999999999999999996 788999999999
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+|+.... .+++|+.+ ..+.+.|+.+|+++|.+++.
T Consensus 130 vyg~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~ 164 (337)
T 1r6d_A 130 VYGSIDS----GSWTESSP-----------------------------------------LEPNSPYAASKAGSDLVARA 164 (337)
T ss_dssp GGCCCSS----SCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCC----CCCCCCCC-----------------------------------------CCCCCchHHHHHHHHHHHHH
Confidence 9986531 22222221 23457899999999999987
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ ..+++++++||+.|||+...+ . ..+..++.....+....+++++.+.++++|++|+|++++.++....
T Consensus 165 ~~~~~g~~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-- 235 (337)
T 1r6d_A 165 YHRTYGLDVRITRCCNNYGPYQHP-E------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-- 235 (337)
T ss_dssp HHHHHCCCEEEEEECEEECTTCCT-T------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHHCCCEEEEEeeeeECCCCCC-C------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC--
Confidence 6 458999999999999988632 1 2233455566666655566778889999999999999999987432
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
. +++||++++ .++|+.|+++.+++.+|.+
T Consensus 236 ~--g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 236 A--GEIYHIGGG--LELTNRELTGILLDSLGAD 264 (337)
T ss_dssp T--TCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred C--CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 2 679999998 7799999999999999875
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.9e-31 Score=255.85 Aligned_cols=249 Identities=14% Similarity=0.087 Sum_probs=183.6
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.....+|+|||||||||||++++++|+++| ++|++++|+......+ ...+
T Consensus 8 ~~~~~~M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l---------------------------~~~~ 57 (342)
T 2x4g_A 8 SRPGAHVKYAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQRL---------------------------AYLE 57 (342)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECTTSCGGGG---------------------------GGGC
T ss_pred cccccCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecChHhhhhh---------------------------ccCC
Confidence 333445799999999999999999999999 5679999987543211 0137
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++++.+|++ +.+.+..+++++|+|||+|+.... ...+..++++|+.++.++++++.+. ++++|||+||.++
T Consensus 58 ~~~~~~Dl~-------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 129 (342)
T 2x4g_A 58 PECRVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYA 129 (342)
T ss_dssp CEEEECCTT-------CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGG
T ss_pred eEEEEecCC-------CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHh
Confidence 889999999 555666778899999999997653 3566778999999999999999986 7899999999999
Q ss_pred ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC----CchhhHhHHHHHHH
Q 015874 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW----PNTYVFTKTMGEML 241 (399)
Q Consensus 166 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~~~E~~ 241 (399)
|+...+. ..+ +|+.+ ..+ .+.|+.+|+.+|.+
T Consensus 130 ~~~~~~~--~~~-~E~~~-----------------------------------------~~p~~~~~~~Y~~sK~~~e~~ 165 (342)
T 2x4g_A 130 MPRHPQG--LPG-HEGLF-----------------------------------------YDSLPSGKSSYVLCKWALDEQ 165 (342)
T ss_dssp SCCCTTS--SCB-CTTCC-----------------------------------------CSSCCTTSCHHHHHHHHHHHH
T ss_pred hCcCCCC--CCC-CCCCC-----------------------------------------CCccccccChHHHHHHHHHHH
Confidence 9865420 011 22221 122 57899999999999
Q ss_pred HHHh-hCCCcEEEEecCceecCCC-CCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 242 MQQS-KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 242 l~~~-~~~~~~~i~Rp~~V~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
++.+ ..+++++++||+.|||+.. .+ + +..++.....|....+ ++..++++|++|+|++++.++...
T Consensus 166 ~~~~~~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~ 233 (342)
T 2x4g_A 166 AREQARNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERG 233 (342)
T ss_dssp HHHHHHTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHS
T ss_pred HHHHhhcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCC
Confidence 9887 2399999999999999876 21 1 1234455555554443 457889999999999999999753
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.. +++||++++ . +|+.|+++.+.+.+|.+.
T Consensus 234 ~~----g~~~~v~~~--~-~s~~e~~~~i~~~~g~~~ 263 (342)
T 2x4g_A 234 RI----GERYLLTGH--N-LEMADLTRRIAELLGQPA 263 (342)
T ss_dssp CT----TCEEEECCE--E-EEHHHHHHHHHHHHTCCC
T ss_pred CC----CceEEEcCC--c-ccHHHHHHHHHHHhCCCC
Confidence 32 579999998 7 999999999999998754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.6e-30 Score=250.78 Aligned_cols=265 Identities=18% Similarity=0.191 Sum_probs=189.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|+|||||||||||++++++|+++|+ +|++++|.... ....+++.+. .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~r~~~~~~~~~~~l~~~---------------------~~ 57 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY---LPVVIDNFHNAFRGGGSLPESLRRVQEL---------------------TG 57 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC---CEEEEECSSSSCBCSSSSBHHHHHHHHH---------------------HT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCcccccccccHHHHHHHHhc---------------------cC
Confidence 47999999999999999999999994 56888886532 1122222110 12
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.+++++.+|+++ .+.+..+++ ++|+|||+|+.... .+.+...+++|+.++.++++++++. ++++||+
T Consensus 58 ~~~~~~~~D~~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~ 129 (348)
T 1ek6_A 58 RSVEFEEMDILD-------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVF 129 (348)
T ss_dssp CCCEEEECCTTC-------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCCCC-------HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 578899999994 455556666 89999999997643 2466788999999999999999985 7899999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC-CchhhHhHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~ 238 (399)
+||.++|+.... .+++|+.+ ..+ .+.|+.+|+.+
T Consensus 130 ~SS~~~~g~~~~----~~~~E~~~-----------------------------------------~~p~~~~Y~~sK~~~ 164 (348)
T 1ek6_A 130 SSSATVYGNPQY----LPLDEAHP-----------------------------------------TGGCTNPYGKSKFFI 164 (348)
T ss_dssp EEEGGGGCSCSS----SSBCTTSC-----------------------------------------CCCCSSHHHHHHHHH
T ss_pred ECcHHHhCCCCC----CCcCCCCC-----------------------------------------CCCCCCchHHHHHHH
Confidence 999999986432 22222221 122 57899999999
Q ss_pred HHHHHHh-hCC--CcEEEEecCceecCCCCCCCCccc---CcchHHHHHHHhh-cCccccccC------CCccccCeeeH
Q 015874 239 EMLMQQS-KEN--LSLVIIRPTVVSGTYKEPFPGWVE---DLKTINTLFVASA-QGNLRCLVG------ETKVIMDVIPV 305 (399)
Q Consensus 239 E~~l~~~-~~~--~~~~i~Rp~~V~G~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~v 305 (399)
|.+++.+ ..+ ++++++||+.|||+......+... ....+..++.... .+....+++ ++.+.++++|+
T Consensus 165 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 244 (348)
T 1ek6_A 165 EEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244 (348)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEH
T ss_pred HHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEH
Confidence 9999887 224 999999999999986411111100 0122223333333 333333333 56788999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+|+|++++.++.......+ +++||++++ .++|+.|+++.+++.+|.+.
T Consensus 245 ~Dva~a~~~~~~~~~~~~g-~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 292 (348)
T 1ek6_A 245 VDLAKGHIAALRKLKEQCG-CRIYNLGTG--TGYSVLQMVQAMEKASGKKI 292 (348)
T ss_dssp HHHHHHHHHHHHHHTTTCC-EEEEEECCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhcccccCC-ceEEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 9999999999975321221 379999998 77999999999999998653
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.3e-30 Score=249.22 Aligned_cols=259 Identities=20% Similarity=0.245 Sum_probs=189.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++++++|+++| ++|++++|....... ....+++++.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~ 50 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEG---LSVVVVDNLQTGHED---------------------------AITEGAKFYN 50 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGG---------------------------GSCTTSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCcCchh---------------------------hcCCCcEEEE
Confidence 3789999999999999999999999 567888887543210 0113688999
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|++ +.+.+..+++ ++|+|||+|+.... .+.+...+++|+.++.++++++++. ++++|||+||.++|
T Consensus 51 ~D~~-------~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~ 122 (330)
T 2c20_A 51 GDLR-------DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATY 122 (330)
T ss_dssp CCTT-------CHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGG
T ss_pred CCCC-------CHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceee
Confidence 9999 4555556666 89999999997653 2467788999999999999999986 78999999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
+...+ .+++|+.+ ..+.+.|+.+|..+|++++.+
T Consensus 123 ~~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~ 157 (330)
T 2c20_A 123 GEVDV----DLITEETM-----------------------------------------TNPTNTYGETKLAIEKMLHWYS 157 (330)
T ss_dssp CSCSS----SSBCTTSC-----------------------------------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCCcCCC-----------------------------------------CCCCChHHHHHHHHHHHHHHHH
Confidence 86432 22233221 134578999999999999887
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCccc-CcchHHHHHHHhhcC--ccccccC------CCccccCeeeHHHHHHHHHHH
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVE-DLKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~i~v~Dva~~i~~~ 315 (399)
..+++++++||+.|||+......+... ....+...+.....+ ....+++ ++++.++++|++|+|++++.+
T Consensus 158 ~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~ 237 (330)
T 2c20_A 158 QASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLG 237 (330)
T ss_dssp HTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred HHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHH
Confidence 458999999999999987421111100 011222223332222 2223333 567889999999999999999
Q ss_pred HHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+...... +.+++||++++ .++|+.|+++.+++.+|.+.
T Consensus 238 ~~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 275 (330)
T 2c20_A 238 LKDLQNG-GESDFYNLGNG--NGFSVKEIVDAVREVTNHEI 275 (330)
T ss_dssp HHHHHTT-CCCEEEECCCT--TCBCHHHHHHHHHHHTTSCC
T ss_pred HhccccC-CCCCeEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 8753221 12579999998 77999999999999998653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=253.42 Aligned_cols=265 Identities=19% Similarity=0.238 Sum_probs=196.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||++++++|+++ | ++|++++|+........ ...+++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~ 51 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISRFL--------------------------NHPHFHFVE 51 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGGGGGT--------------------------TCTTEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC---CEEEEEeCCcchHHHhh--------------------------cCCCeEEEe
Confidence 68999999999999999999998 7 56799999765421100 125789999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+|+++. .+.+..+++++|+|||+||.... ..++...+++|+.++.++++++++. + ++|||+||.++|+.
T Consensus 52 ~D~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 52 GDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGM 123 (345)
T ss_dssp CCTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBT
T ss_pred ccccCc------HHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCC
Confidence 999952 34444667789999999997653 3466778999999999999999986 5 89999999999987
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
..+ .++|.... .. ..+...+.+.|+.+|+.+|++++.+
T Consensus 124 ~~~~~~~e~~~~-----~~----------------------------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~ 164 (345)
T 2bll_A 124 CSDKYFDEDHSN-----LI----------------------------------VGPVNKPRWIYSVSKQLLDRVIWAYGE 164 (345)
T ss_dssp CCCSSBCTTTCC-----CB----------------------------------CCCTTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCcccc-----cc----------------------------------cCcccCcccccHHHHHHHHHHHHHHHH
Confidence 542 23333211 00 0000123458999999999999876
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcc-cCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||+......... .....+..++.....+....+++++.+.++++|++|+|++++.++.......
T Consensus 165 ~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~- 243 (345)
T 2bll_A 165 KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRC- 243 (345)
T ss_dssp HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTT-
T ss_pred hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccC-
Confidence 45899999999999999863321110 1112345566666777666666777889999999999999999997432111
Q ss_pred CCcEEEecCCCCC-cccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~-~~s~~el~~~l~~~~~~~~ 356 (399)
.+++||++++ . ++|+.|+++.+++.+|..+
T Consensus 244 ~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 244 DGEIINIGNP--ENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp TTEEEEECCT--TSEEEHHHHHHHHHHHHHTCT
T ss_pred CCceEEeCCC--CCCCCHHHHHHHHHHHhCCCc
Confidence 1689999997 5 6999999999999998754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=259.90 Aligned_cols=286 Identities=12% Similarity=0.061 Sum_probs=192.4
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH--------------HHHHHHHHhhhhhHHH
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA--------------ALRFQNEVLAKDVFNV 70 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~--------------~~~~~~~l~~~~~~~~ 70 (399)
++-.+.++++|||||||||||++|+++|+++| ++|+++.|....... .+.+.+
T Consensus 4 ~~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~---------- 70 (404)
T 1i24_A 4 SHHHHHHGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR---------- 70 (404)
T ss_dssp --------CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH----------
T ss_pred ccccccCCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEecCccccccccccccccccchhhhhhhh----------
Confidence 45567788999999999999999999999999 566888775321100 011110
Q ss_pred HHhhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCcc---ccH---HHHHHHhHHHHH
Q 015874 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD---ERY---DVAFGINTLGVI 142 (399)
Q Consensus 71 ~~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~~---~~~---~~~~~~n~~~~~ 142 (399)
+.. ....+++++.+|+++ .+.+..++++ +|+|||+||..... .+. ...+++|+.++.
T Consensus 71 ~~~--------~~~~~v~~~~~Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~ 135 (404)
T 1i24_A 71 WKA--------LTGKSIELYVGDICD-------FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTL 135 (404)
T ss_dssp HHH--------HHCCCCEEEESCTTS-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred Hhh--------ccCCceEEEECCCCC-------HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHH
Confidence 000 012578899999994 4545466665 99999999976432 122 347899999999
Q ss_pred HHHHHHHhccCC-ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccc
Q 015874 143 HLVNFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (399)
Q Consensus 143 ~ll~~a~~~~~~-~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
++++++++. +. ++||++||.++|+.....++|+.++++.... ....
T Consensus 136 ~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~--------------------------------~~~~ 182 (404)
T 1i24_A 136 NVLFAIKEF-GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGR--------------------------------TDTL 182 (404)
T ss_dssp HHHHHHHHH-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTE--------------------------------EEEE
T ss_pred HHHHHHHHh-CCCcEEEEeCcHHHhCCCCCCCCccccccccccc--------------------------------cccc
Confidence 999999986 55 6999999999998755444444221100000 0000
Q ss_pred cccCCCCchhhHhHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCC---CCcccC-------cchHHHHHHHhhcCcc
Q 015874 222 AKLHGWPNTYVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF---PGWVED-------LKTINTLFVASAQGNL 289 (399)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~ 289 (399)
..+..+.+.|+.+|+++|++++.+ ..+++++++||+.|||+...+. +++... ...+..++.....|..
T Consensus 183 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 262 (404)
T 1i24_A 183 PYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHP 262 (404)
T ss_dssp ECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCC
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCe
Confidence 012245678999999999999876 4589999999999999976321 011000 1345566777777776
Q ss_pred ccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHh---hccC
Q 015874 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY---FTKK 355 (399)
Q Consensus 290 ~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~---~~~~ 355 (399)
..+++++.+.++++|++|+|++++.++.... ..+..++||+++ .++|+.|+++.+++. +|.+
T Consensus 263 ~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~---~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 263 LTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT---EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp EEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS---EEEEHHHHHHHHHHHHHTTTCC
T ss_pred eEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC---CCCcHHHHHHHHHHHHHhhCCC
Confidence 6667888889999999999999999997432 121126999987 459999999999998 5543
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=256.36 Aligned_cols=266 Identities=14% Similarity=0.132 Sum_probs=195.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++|+|||||||||||++|+++|+++| ++|++++|+.......... + . ...++
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~---~-------------~------~~~~~ 59 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFET---A-------------R------VADGM 59 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHHH---T-------------T------TTTTS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEeCCCcccchhhHh---h-------------c------cCCce
Confidence 45788999999999999999999999999 5679999987543222110 0 0 12578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
+++.+|+++ .+.+..++++ +|+|||+||.... ...+...+++|+.++.++++++.+...+++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 60 QSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EEEEccccC-------HHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 899999994 4445455554 8999999996432 355678899999999999999998634889999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++|+.... ...++|+. +..+.+.|+.+|+++|+++
T Consensus 133 ~~vyg~~~~---~~~~~E~~-----------------------------------------~~~~~~~Y~~sK~~~e~~~ 168 (357)
T 1rkx_A 133 DKCYDNKEW---IWGYRENE-----------------------------------------AMGGYDPYSNSKGCAELVT 168 (357)
T ss_dssp GGGBCCCCS---SSCBCTTS-----------------------------------------CBCCSSHHHHHHHHHHHHH
T ss_pred HHHhCCCCc---CCCCCCCC-----------------------------------------CCCCCCccHHHHHHHHHHH
Confidence 999996542 01122211 1134578999999999999
Q ss_pred HHh--h---------CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 243 QQS--K---------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 243 ~~~--~---------~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+ . .+++++++||+.|||+...+. ...+..++.....|....+ .++.+.++++|++|+|++
T Consensus 169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a 241 (357)
T 1rkx_A 169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------DRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSG 241 (357)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------SCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHH
T ss_pred HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc------ccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHH
Confidence 876 2 289999999999999875211 1234455666666665444 345678999999999999
Q ss_pred HHHHHHhcc-CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 312 MIVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 312 i~~~~~~~~-~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++.++.... .....+++||++++...++|+.|+++.+++.+|.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~ 287 (357)
T 1rkx_A 242 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 287 (357)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence 999887411 100115799999741156999999999999998754
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=266.89 Aligned_cols=295 Identities=24% Similarity=0.344 Sum_probs=205.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHh---CCCcCeEEEEEecCCcccHHHHHHHHHhhh--hhHHHHHhhhcccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRV---QPNVKKLYLFVRAADIDSAALRFQNEVLAK--DVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~---g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~ 83 (399)
..++|+|||||||||||++|+++|++. | ++|++++|+.......+++.+.+... ..+..+ .+..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g---~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~ 138 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVD---GRLICLVRAESDEDARRRLEKTFDSGDPELLRHF--------KELA 138 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTT---CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHH--------HHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCC---CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhh--------hhhc
Confidence 356899999999999999999999999 6 67899999987665555554332110 000111 1112
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
..++.++.+|++++++++.. +.+..+++++|+|||+||..+. .++...+++|+.++.+++++|.+. ++++|||+||.
T Consensus 139 ~~~v~~v~~Dl~~~~~gld~-~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~ 215 (478)
T 4dqv_A 139 ADRLEVVAGDKSEPDLGLDQ-PMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTA 215 (478)
T ss_dssp TTTEEEEECCTTSGGGGCCH-HHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEG
T ss_pred cCceEEEEeECCCcccCCCH-HHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeeh
Confidence 36899999999998888744 4445778899999999999877 667778999999999999999985 78999999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
++|+.... ..++|+.+..+ ............+.|+.+|+++|++++
T Consensus 216 ~v~~~~~~----~~~~E~~~~~p------------------------------~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 261 (478)
T 4dqv_A 216 DVGAAIEP----SAFTEDADIRV------------------------------ISPTRTVDGGWAGGYGTSKWAGEVLLR 261 (478)
T ss_dssp GGGTTSCT----TTCCSSSCHHH------------------------------HCCEEECCTTSEECHHHHHHHHHHHHH
T ss_pred hhcCccCC----CCcCCcccccc------------------------------cCcccccccccccchHHHHHHHHHHHH
Confidence 99986432 22333221100 000000111234679999999999999
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHh-hcCcccc-ccCC------CccccCeeeHHHHHHHHH
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRC-LVGE------TKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~------~~~~~~~i~v~Dva~~i~ 313 (399)
.+ ..+++++++||+.|||+... .+......++..++... ..|..+. +++. ++..++++|++|+|++++
T Consensus 262 ~~~~~~gi~~~ivRpg~v~G~~~~--~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~ 339 (478)
T 4dqv_A 262 EANDLCALPVAVFRCGMILADTSY--AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIA 339 (478)
T ss_dssp HHHHHHCCCEEEEEECEEECCSSS--SSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHH
T ss_pred HHHHHhCCCeEEEECceeeCCCcc--CCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHH
Confidence 88 35999999999999998641 12112223344444433 2233322 2211 267899999999999999
Q ss_pred HHHHhccC-CCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 314 VAMVAHAK-QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 314 ~~~~~~~~-~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
.++..... ....+++||++++...++|+.|+++.+.+. |.
T Consensus 340 ~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~ 380 (478)
T 4dqv_A 340 VLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GY 380 (478)
T ss_dssp HHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TC
T ss_pred HHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CC
Confidence 99874211 112268999999833339999999999996 54
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=252.26 Aligned_cols=274 Identities=17% Similarity=0.184 Sum_probs=191.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc--HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||++++++|+++| ++|+++.|...... ....+. ...+++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~l~-----------------------~~~~~~~~ 55 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKGATDNLHWLS-----------------------SLGNFEFV 55 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTTHHHHHHHHH-----------------------TTCCCEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeCCCccCchhhhhhhc-----------------------cCCceEEE
Confidence 689999999999999999999999 56788888542211 111111 01468899
Q ss_pred eccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEecce
Q 015874 91 PGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAY 164 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~-~~v~~SS~~ 164 (399)
.+|++ +.+.+..++++ +|+|||+|+.... .+.+...+++|+.++.++++++.+. .++ +|||+||.+
T Consensus 56 ~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~ 127 (347)
T 1orr_A 56 HGDIR-------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNK 127 (347)
T ss_dssp ECCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGG
T ss_pred EcCCC-------CHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHH
Confidence 99999 45555566666 9999999997653 2467788999999999999999986 564 999999999
Q ss_pred eecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 165 v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|+...+ ...|.......+.. ..+.....+..+.+.|+.+|+++|++++
T Consensus 128 v~g~~~~~~~~e~~~~~~~~~~------------------------------~~~~~e~~~~~~~~~Y~~sK~~~E~~~~ 177 (347)
T 1orr_A 128 VYGDLEQYKYNETETRYTCVDK------------------------------PNGYDESTQLDFHSPYGCSKGAADQYML 177 (347)
T ss_dssp GGTTCTTSCEEECSSCEEETTC------------------------------TTCBCTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred HhCCCCcCCccccccccccccc------------------------------ccCccccCCCCCCCchHHHHHHHHHHHH
Confidence 9986432 12221100000000 0000001122456789999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCc-----cccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-----LRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+ ..+++++++||+.|||+...... ....+..++.....+. ...+++++++.++++|++|+|++++.++
T Consensus 178 ~~~~~~gi~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 253 (347)
T 1orr_A 178 DYARIFGLNTVVFRHSSMYGGRQFATY----DQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 253 (347)
T ss_dssp HHHHHHCCEEEEEEECCEECTTCCCBT----TBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHhCCcEEEEccCceeCcCCCCCC----cCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHH
Confidence 87 45899999999999998763211 1112334444444444 3445677889999999999999999998
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
....... +++||++++..+++|+.|+++.+.+.+|.+.
T Consensus 254 ~~~~~~~--g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 254 ANVSKIR--GNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp HTHHHHT--TCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hccccCC--CCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 7311111 5799999872225999999999999998754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=249.04 Aligned_cols=236 Identities=13% Similarity=0.056 Sum_probs=179.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+|+||||| +||||++|++.|+++| ++|++++|+.... ..++++
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-------------------------------~~~~~~ 45 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQG---HEVTGLRRSAQPM-------------------------------PAGVQT 45 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECTTSCC-------------------------------CTTCCE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------------ccCCce
Confidence 3568999999 5999999999999999 4568999986542 257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcC-ccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~-~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+.+|+++++ .+..++++ +|+|||+|+... ..+...+++|+.++.++++++++. ++++|||+||.++|+.
T Consensus 46 ~~~Dl~d~~-------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~ 115 (286)
T 3gpi_A 46 LIADVTRPD-------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQ 115 (286)
T ss_dssp EECCTTCGG-------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCC
T ss_pred EEccCCChH-------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcC
Confidence 999999643 33344454 999999999743 345667888999999999999985 7899999999999997
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
..+ .++|+ . +..+.+.|+.+|+++|++ +.+
T Consensus 116 ~~~~~~~E~-----~-----------------------------------------~~~p~~~Y~~sK~~~E~~-~~~-- 146 (286)
T 3gpi_A 116 EVEEWLDED-----T-----------------------------------------PPIAKDFSGKRMLEAEAL-LAA-- 146 (286)
T ss_dssp CCSSEECTT-----S-----------------------------------------CCCCCSHHHHHHHHHHHH-GGG--
T ss_pred CCCCCCCCC-----C-----------------------------------------CCCCCChhhHHHHHHHHH-Hhc--
Confidence 643 23333 2 124467899999999999 663
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
++++++||+.|||+... .++..+.. ....+.+...++++|++|+|++++.++...... ..++
T Consensus 147 -~~~~ilR~~~v~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~ 208 (286)
T 3gpi_A 147 -YSSTILRFSGIYGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA-VPER 208 (286)
T ss_dssp -SSEEEEEECEEEBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS-CCCS
T ss_pred -CCeEEEecccccCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC-CCCc
Confidence 99999999999998762 12333333 223466788999999999999999999853211 1268
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCCCCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~ 359 (399)
+||++++ +++|+.|+++.+++.+|.+....
T Consensus 209 ~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~~ 238 (286)
T 3gpi_A 209 LYIVTDN--QPLPVHDLLRWLADRQGIAYPAG 238 (286)
T ss_dssp EEEECCS--CCEEHHHHHHHHHHHTTCCCCCS
T ss_pred eEEEeCC--CCCCHHHHHHHHHHHcCCCCCCC
Confidence 9999998 77999999999999999765443
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=256.72 Aligned_cols=243 Identities=14% Similarity=0.093 Sum_probs=181.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc----ccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI----DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+.+|+|||||||||||++|+++|+++| ++|++++|+... ...... ....
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~-----------------------~~~~ 57 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASG---EEVTVLDDLRVPPMIPPEGTGK-----------------------FLEK 57 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECCCSSCCSSCCTTSSE-----------------------EECS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCcccccchhhhhh-----------------------hccC
Confidence 3567899999999999999999999999 456899887652 100000 0001
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+++++.+|++ ++|+|||+|+.... .......++ |+.++.++++++++. ++++|||+|
T Consensus 58 ~~~~~~~~Dl~-----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~S 118 (321)
T 3vps_A 58 PVLELEERDLS-----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGS 118 (321)
T ss_dssp CGGGCCHHHHT-----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred CCeeEEeCccc-----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEec
Confidence 22333333332 89999999998653 234455567 999999999999996 789999999
Q ss_pred cceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 162 TAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 162 S~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
|.++|+...+ .++|+ . +..+.+.|+.+|+.+|+
T Consensus 119 S~~v~~~~~~~~~~E~-----~-----------------------------------------~~~p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 119 TCEVYGQADTLPTPED-----S-----------------------------------------PLSPRSPYAASKVGLEM 152 (321)
T ss_dssp EGGGGCSCSSSSBCTT-----S-----------------------------------------CCCCCSHHHHHHHHHHH
T ss_pred CHHHhCCCCCCCCCCC-----C-----------------------------------------CCCCCChhHHHHHHHHH
Confidence 9999997642 23332 2 12446789999999999
Q ss_pred HHHHh--hCCC-cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 241 LMQQS--KENL-SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 241 ~l~~~--~~~~-~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+++.+ ..++ +++++||+.|||+...+ ...+..++.....+....+++++.+.++++|++|+|++++.++.
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~ 225 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERP-------DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN 225 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCT-------TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCC-------CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh
Confidence 99987 4688 99999999999988732 12344556666666666677888899999999999999999987
Q ss_pred hccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
.... + +||++++ +++|+.|+++.+. .+|.+..
T Consensus 226 ~~~~----g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~~ 257 (321)
T 3vps_A 226 RPLP----S-VVNFGSG--QSLSVNDVIRILQ-ATSPAAE 257 (321)
T ss_dssp SCCC----S-EEEESCS--CCEEHHHHHHHHH-TTCTTCE
T ss_pred cCCC----C-eEEecCC--CcccHHHHHHHHH-HhCCCCc
Confidence 4322 5 9999998 7799999999999 9887543
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=249.02 Aligned_cols=258 Identities=17% Similarity=0.112 Sum_probs=192.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
--.+|+|||||||||||++++++|+++| ++|++++|+...... .++.. + ....++.
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~~-~-------------------~~~~~~~ 66 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTR-WRLRE-L-------------------GIEGDIQ 66 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-HHHHH-T-------------------TCGGGEE
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCccccc-cchhh-c-------------------cccCceE
Confidence 3456899999999999999999999999 567999998654211 11110 0 0125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCC-ceEEEEec
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVST 162 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~-~~~v~~SS 162 (399)
++.+|+++ .+.+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ++||++||
T Consensus 67 ~~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS 138 (335)
T 1rpn_A 67 YEDGDMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQAST 138 (335)
T ss_dssp EEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEE
T ss_pred EEECCCCC-------HHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeC
Confidence 99999994 444545555 47999999997653 3567788999999999999999986 64 89999999
Q ss_pred ceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 163 ~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
.++|+...+ .++|+ .+ ..+.+.|+.+|+++|.+
T Consensus 139 ~~v~g~~~~~~~~E~-----~~-----------------------------------------~~p~~~Y~~sK~~~e~~ 172 (335)
T 1rpn_A 139 SEMFGLIQAERQDEN-----TP-----------------------------------------FYPRSPYGVAKLYGHWI 172 (335)
T ss_dssp GGGGCSCSSSSBCTT-----SC-----------------------------------------CCCCSHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCcc-----cC-----------------------------------------CCCCChhHHHHHHHHHH
Confidence 999987542 23332 21 23457899999999999
Q ss_pred HHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 242 l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
++.+ ..+++++++||+.+||+.... .+.. ..+..++.....|... ...+++++.++++|++|+|++++.++..
T Consensus 173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 248 (335)
T 1rpn_A 173 TVNYRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ 248 (335)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhc
Confidence 9887 458999999999999987621 1111 2233455555666533 3457778899999999999999999974
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.. .++||++++ .++|+.|+++.+.+.+|.+
T Consensus 249 ~~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 249 DK-----ADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp SS-----CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred CC-----CCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 22 368999998 7799999999999999874
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=250.02 Aligned_cols=251 Identities=17% Similarity=0.119 Sum_probs=187.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+|+|||||||||||++|+++|+++ | ++|++++|+...... . .++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~----~-------------------------~~~~~ 49 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGT---ENVIASDIRKLNTDV----V-------------------------NSGPF 49 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCG---GGEEEEESCCCSCHH----H-------------------------HSSCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCC---CEEEEEcCCCccccc----c-------------------------CCCce
Confidence 478999999999999999999999 8 556889887654210 0 25678
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~--~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
+.+|++ +.+.+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++++. ++++|||+||.++
T Consensus 50 ~~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 121 (312)
T 2yy7_A 50 EVVNAL-------DFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAV 121 (312)
T ss_dssp EECCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGG
T ss_pred EEecCC-------CHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHH
Confidence 999999 4555556666 89999999997543 2567788999999999999999986 7889999999999
Q ss_pred ecCcCC--ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 166 AGERTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 166 ~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
|+.... .+.|. . +..+.+.|+.+|+++|++++
T Consensus 122 ~~~~~~~~~~~e~-----~-----------------------------------------~~~~~~~Y~~sK~~~e~~~~ 155 (312)
T 2yy7_A 122 FGPTTPKENTPQY-----T-----------------------------------------IMEPSTVYGISKQAGERWCE 155 (312)
T ss_dssp CCTTSCSSSBCSS-----C-----------------------------------------BCCCCSHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCcccc-----C-----------------------------------------cCCCCchhHHHHHHHHHHHH
Confidence 986432 22222 1 12446789999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccC
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAK 321 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~ 321 (399)
.+ ..+++++++||+.|||+...+..... ..+...+.....+....+++++++.++++|++|+|++++.++.....
T Consensus 156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp HHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred HHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 76 45899999999999998764322110 11223333333333344456677889999999999999999974332
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
....+++||+++ .++|+.|+++.+.+.+|.
T Consensus 233 ~~~~~~~~ni~~---~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 233 KIKIHSSYNLAA---MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp GCCCSSCEECCS---EEECHHHHHHHHHTTCTT
T ss_pred ccccCceEEeCC---CccCHHHHHHHHHHHCCC
Confidence 111147899985 569999999999999873
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-30 Score=252.21 Aligned_cols=256 Identities=18% Similarity=0.221 Sum_probs=191.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCC--cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAAD--IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+|||||||||||++|+++|++. | ++|+++.|... ....+..+ . ...++++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~---------------------~--~~~~~~~ 54 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQ---DTVVNIDKLTYAGNLESLSDI---------------------S--ESNRYNF 54 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCS---CEEEEEECCCTTCCGGGGTTT---------------------T--TCTTEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCC---CeEEEEecCCCCCchhhhhhh---------------------h--cCCCeEE
Confidence 57999999999999999999998 6 56788888652 11111000 0 0257899
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhc-cCCc-------e
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC-VKLK-------V 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~-------~ 156 (399)
+.+|++ +.+.+..+++ ++|+|||+||.... ...++..+++|+.++.++++++.+. .+++ +
T Consensus 55 ~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~ 127 (361)
T 1kew_A 55 EHADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFR 127 (361)
T ss_dssp EECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCE
T ss_pred EECCCC-------CHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCce
Confidence 999999 4555556666 89999999998653 2466788999999999999999874 2555 9
Q ss_pred EEEEecceeecCcCC--cc-cc---ccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 157 FVHVSTAYVAGERTG--LI-LE---NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~--~~-~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
|||+||.++||.... .. .+ .+++|+. +..+.+.
T Consensus 128 iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~-----------------------------------------~~~~~~~ 166 (361)
T 1kew_A 128 FHHISTDEVYGDLPHPDEVENSVTLPLFTETT-----------------------------------------AYAPSSP 166 (361)
T ss_dssp EEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS-----------------------------------------CCCCCSH
T ss_pred EEEeCCHHHhCCCcccccccccccCCCCCCCC-----------------------------------------CCCCCCc
Confidence 999999999986431 00 00 0222221 2244678
Q ss_pred hhHhHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 231 YVFTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
|+.+|+++|.+++.+ +.+++++++||+.|||+...+ . ..+..++.....+....+++++.+.++++|++|+
T Consensus 167 Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 239 (361)
T 1kew_A 167 YSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-T------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-c------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence 999999999999887 458999999999999988632 1 2233455566666655556777889999999999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
|++++.++.... . +++||++++ .++|+.|+++.+++.+|..
T Consensus 240 a~a~~~~~~~~~--~--g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 240 ARALHMVVTEGK--A--GETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHHHCC--T--TCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC--C--CCEEEecCC--CeeeHHHHHHHHHHHhCCc
Confidence 999999997432 2 679999998 7799999999999999864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=251.86 Aligned_cols=278 Identities=14% Similarity=0.180 Sum_probs=190.0
Q ss_pred CcEEEEecCcchhHHHHHHHHH-HhCCCcCeEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll-~~g~~V~~v~~~~R~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|+|||||||||||++++++|+ ++| ++|+++.|..... ...+.+.+.+ +.... ....
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~ 65 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARKL----------QQSDG---PKPP 65 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHHH----------HHSCS---SCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEecCCcccccccccchHHHHHHHH----------HHhhc---cccc
Confidence 5799999999999999999999 999 5678888875431 0012211100 00000 0001
Q ss_pred Cc---eEEEeccCCCCCCCCCchhhHHHHhc--C-ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 015874 85 EK---ITFVPGDISSEDLGLKDSNLKEELWN--E-LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 85 ~~---i~~~~gDl~~~~~~~~~~~~~~~~~~--~-~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~ 155 (399)
.+ ++++.+|+++ .+.+..+++ + +|+|||+|+.... .+.+...+++|+.++.++++++++. +++
T Consensus 66 ~~~~~~~~~~~Dl~d-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~ 137 (397)
T 1gy8_A 66 WADRYAALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCD 137 (397)
T ss_dssp TTTCCCEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cCCceEEEEECCCCC-------HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCC
Confidence 24 8899999994 444445555 5 9999999998654 2567788999999999999999986 789
Q ss_pred eEEEEecceeecCcCCc-c--ccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 156 VFVHVSTAYVAGERTGL-I--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~-~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+|||+||.++|+..... . ...+++|+. +..+.+.|+
T Consensus 138 ~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~-----------------------------------------~~~p~~~Y~ 176 (397)
T 1gy8_A 138 KIIFSSSAAIFGNPTMGSVSTNAEPIDINA-----------------------------------------KKSPESPYG 176 (397)
T ss_dssp EEEEEEEGGGTBSCCC-----CCCCBCTTS-----------------------------------------CCBCSSHHH
T ss_pred EEEEECCHHHhCCCCcccccccccCcCccC-----------------------------------------CCCCCCchH
Confidence 99999999999864310 0 011222222 123457899
Q ss_pred HhHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCCCCcc-c-CcchHHHHH----HHhhcCcc------------ccc
Q 015874 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWV-E-DLKTINTLF----VASAQGNL------------RCL 292 (399)
Q Consensus 233 ~sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~-~-~~~~~~~~~----~~~~~~~~------------~~~ 292 (399)
.+|+++|.+++.+ ..+++++++||+.|||+......+.. . ....+..++ .+...+.. ..+
T Consensus 177 ~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (397)
T 1gy8_A 177 ESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPI 256 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCcee
Confidence 9999999999887 45899999999999998752211111 0 112222222 14444432 233
Q ss_pred cC------CCccccCeeeHHHHHHHHHHHHHhccCCC--CCC---cEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 293 VG------ETKVIMDVIPVDMVVNAMIVAMVAHAKQP--SDA---NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 293 ~~------~~~~~~~~i~v~Dva~~i~~~~~~~~~~~--~~~---~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++ ++++.++|+|++|+|++++.++....... +.+ ++||++++ +++|+.|+++.+.+.+|.+.
T Consensus 257 ~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 329 (397)
T 1gy8_A 257 FGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPI 329 (397)
T ss_dssp ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCC
T ss_pred ecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 34 56789999999999999999987432211 013 79999998 77999999999999998643
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=244.18 Aligned_cols=249 Identities=20% Similarity=0.232 Sum_probs=188.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++++++|+++| ++|.++.|....... ....++.++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDNLATGKRE---------------------------NVPKGVPFFRV 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECCCSSCCGG---------------------------GSCTTCCEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCCcCchh---------------------------hcccCeEEEEC
Confidence 589999999999999999999999 556888774322100 00136778999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc-eee
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA-YVA 166 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~-~v~ 166 (399)
|+++ .+.+..+++ ++|+|||+|+.... .+++...+++|+.++.++++++++. ++++||++||. ++|
T Consensus 51 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 51 DLRD-------KEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIY 122 (311)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHH
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhc
Confidence 9994 444445555 79999999997653 2456778999999999999999985 78899999999 899
Q ss_pred cC-cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GE-RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+. ... .+.+|+.+ ..+.+.|+.+|+++|.+++.+
T Consensus 123 g~~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 123 GEVPEG----ERAEETWP-----------------------------------------PRPKSPYAASKAAFEHYLSVY 157 (311)
T ss_dssp CCCCTT----CCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCC----CCcCCCCC-----------------------------------------CCCCChHHHHHHHHHHHHHHH
Confidence 85 221 11222211 134578999999999999876
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc-----CCCccccCeeeHHHHHHHHHHHHHh
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-----GETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
+.+++++++||+.|||+...... ....+..++.+...+....++ +++.+.++++|++|+|++++.++..
T Consensus 158 ~~~~~~~~~~lrp~~v~Gp~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 158 GQSYGLKWVSLRYGNVYGPRQDPHG----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp HHHHCCCEEEEEECEEECTTCCSSS----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeeccccCcCCCCCC----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence 46899999999999998763211 012233455555566655555 6777889999999999999999874
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
. +++||++++ .++|+.|+++.+++.+|.+.
T Consensus 234 ~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 263 (311)
T 2p5y_A 234 L------EGIYNVGTG--EGHTTREVLMAVAEAAGKAP 263 (311)
T ss_dssp C------CEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred C------CCEEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 2 479999998 77999999999999998653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=247.71 Aligned_cols=257 Identities=15% Similarity=0.136 Sum_probs=192.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
...+.+|+|||||||||||++|+++|+++| ++|++++|...... ....+ ....
T Consensus 22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-----------------------~~~~ 75 (343)
T 2b69_A 22 HMEKDRKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRKRNVEHW-----------------------IGHE 75 (343)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGGGTGGG-----------------------TTCT
T ss_pred ccccCCCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeCCCccchhhhhhh-----------------------ccCC
Confidence 345678999999999999999999999999 56789988754321 11000 0125
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
++.++.+|+.+.. +.++|+|||+|+.... ..++...+++|+.++.++++++.+. ++ +|||+||
T Consensus 76 ~~~~~~~D~~~~~------------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS 141 (343)
T 2b69_A 76 NFELINHDVVEPL------------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 141 (343)
T ss_dssp TEEEEECCTTSCC------------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred ceEEEeCccCChh------------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECc
Confidence 7889999998531 3579999999997653 3466778999999999999999986 55 8999999
Q ss_pred ceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 163 ~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
.++|+.... .++|..+.+.. +..+.+.|+.+|+++|++
T Consensus 142 ~~v~g~~~~~~~~E~~~~~~~-----------------------------------------~~~~~~~Y~~sK~~~E~~ 180 (343)
T 2b69_A 142 SEVYGDPEVHPQSEDYWGHVN-----------------------------------------PIGPRACYDEGKRVAETM 180 (343)
T ss_dssp GGGGBSCSSSSBCTTCCCBCC-----------------------------------------SSSTTHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCcccccccCC-----------------------------------------CCCCCCchHHHHHHHHHH
Confidence 999986542 34444332111 123456799999999999
Q ss_pred HHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 242 l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
++.+ ..+++++++||+.|||+...+.. ...+..++.....+....+++++.+.++++|++|+|++++.++...
T Consensus 181 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 181 CYAYMKQEGVEVRVARIFNTFGPRMHMND-----GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTC-----CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHHhCCcEEEEEEcceeCcCCCCCc-----ccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence 9876 46899999999999998763211 1233455666666666666778888999999999999999988632
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
. +++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 256 -~----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 256 -V----SSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp -C----CSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred -C----CCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 1 468999998 77999999999999998754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=250.32 Aligned_cols=251 Identities=14% Similarity=0.167 Sum_probs=188.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|||||||||||++|+++|+++| ++ |+++.|...... ... ..++
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~-~~~--------------------------~~~~ 92 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK-FVN--------------------------LVDL 92 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGG-GGG--------------------------TTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcch-hhc--------------------------ccCc
Confidence 3567899999999999999999999998 54 578888764321 000 0122
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc-----CccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. +.+|++ +.+.+..+.+ ++|+|||+|+.... ...++..+++|+.++.++++++.+. ++ +|||+|
T Consensus 93 ~-~~~d~~-------~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~S 162 (357)
T 2x6t_A 93 N-IADYMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYAS 162 (357)
T ss_dssp C-CSEEEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEE
T ss_pred e-EeeecC-------cHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence 3 678888 5555556665 59999999998654 4567888999999999999999986 67 999999
Q ss_pred cceeecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 162 TAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 162 S~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
|.++|+...+ .++|+. +..+.+.|+.+|+++|.
T Consensus 163 S~~v~g~~~~~~~~E~~----------------------------------------------~~~p~~~Y~~sK~~~E~ 196 (357)
T 2x6t_A 163 SAATYGGRTSDFIESRE----------------------------------------------YEKPLNVFGYSKFLFDE 196 (357)
T ss_dssp EGGGGCSCSSCCCSSGG----------------------------------------------GCCCSSHHHHHHHHHHH
T ss_pred chHHhCCCCCCCcCCcC----------------------------------------------CCCCCChhHHHHHHHHH
Confidence 9999986542 223321 12445789999999999
Q ss_pred HHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc-ccCeeeHHHHHHHHHHHHH
Q 015874 241 LMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 241 ~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~i~~~~~ 317 (399)
+++.+ ..+++++++||+.|||+...+.. . ....+..++.....+....+++++.+ .++++|++|+|++++.++.
T Consensus 197 ~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~ 273 (357)
T 2x6t_A 197 YVRQILPEANSQIVGFRYFNVYGPREGHKG-S--MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273 (357)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCTTCG-G--GSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCeEECCCCCCCc-c--cchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh
Confidence 99887 45899999999999998763211 0 11233455566666665556677778 8999999999999999997
Q ss_pred hccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
... +++||++++ .++|+.|+++.+.+.+|.+
T Consensus 274 ~~~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 274 NGV-----SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HCC-----CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred cCC-----CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 432 479999998 7799999999999999876
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=259.84 Aligned_cols=275 Identities=18% Similarity=0.202 Sum_probs=192.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..+|+|||||||||||++++++|++.| ++|++++|+.......+++.+.+... ++..+......++.+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~---------~~~~~~~~~~~~v~~ 134 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY---------FSEETVEMMLSNIEV 134 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHH---------SCHHHHHHHHTTEEE
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHh---------ccccccccccCceEE
Confidence 456799999999999999999998888 67899999988665556655443221 000001112368999
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+.+|+++++... ...++|+|||+||.......+...+++|+.++.++++++.+ ++++|||+||.++ |..
T Consensus 135 v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~ 203 (427)
T 4f6c_A 135 IVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTY 203 (427)
T ss_dssp EEECC---CCCC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSE
T ss_pred EeCCCCCcccCC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCC
Confidence 999999743211 45789999999999877778888999999999999999998 6789999999999 543
Q ss_pred CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-hC
Q 015874 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KE 247 (399)
Q Consensus 170 ~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~ 247 (399)
.. ...+.+++|+++.. +..+.+.|+.+|+++|.+++.+ +.
T Consensus 204 ~~~~~~~~~~~E~~~~~--------------------------------------~~~~~~~Y~~sK~~~E~~~~~~~~~ 245 (427)
T 4f6c_A 204 FDIDTEDVTFSEADVYK--------------------------------------GQLLTSPYTRSKFYSELKVLEAVNN 245 (427)
T ss_dssp ECSSCSCCEECTTCSCS--------------------------------------SCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCcccccccccc--------------------------------------CCCCCCchHHHHHHHHHHHHHHHHc
Confidence 11 11223333332210 1135689999999999999988 67
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
+++++++|||.|||+..............+..++.....+..... +.++..+++++++|+|++++.++.... .++
T Consensus 246 g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~----~g~ 320 (427)
T 4f6c_A 246 GLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT----PQI 320 (427)
T ss_dssp TCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC----CCS
T ss_pred CCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC----CCC
Confidence 999999999999998873211000011234455555555433222 335678999999999999999987433 278
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
+||++++ +++++.|+++.+++ ++
T Consensus 321 ~~~l~~~--~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 321 IYHVLSP--NKMPVKSLLECVKR-KE 343 (427)
T ss_dssp EEEESCS--CCEEHHHHHHHHHS-SC
T ss_pred EEEecCC--CCCcHHHHHHHHHH-cC
Confidence 9999998 77999999999998 44
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=247.18 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=183.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|||||||||||++|+++|+++|+ .|+++.|+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~v~~~~r~~----------------------------------------- 37 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD----------------------------------------- 37 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT-----------------------------------------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEecCc-----------------------------------------
Confidence 468999999999999999999999994 456665531
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
.+|++ +.+.+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. ++++|||+||.+
T Consensus 38 ~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~ 109 (321)
T 1e6u_A 38 ELNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 109 (321)
T ss_dssp TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred cCCcc-------CHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHH
Confidence 36887 4455556666 89999999998652 3466788999999999999999986 789999999999
Q ss_pred eecCcC-CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC-CchhhHhHHHHHHHH
Q 015874 165 VAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMGEMLM 242 (399)
Q Consensus 165 v~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~l 242 (399)
+|+... ..++|+..... +..+ .+.|+.+|+.+|+++
T Consensus 110 vyg~~~~~~~~E~~~~~~------------------------------------------~~~p~~~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 110 IYPKLAKQPMAESELLQG------------------------------------------TLEPTNEPYAIAKIAGIKLC 147 (321)
T ss_dssp GSCTTCCSSBCGGGTTSS------------------------------------------CCCGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCcCccccccC------------------------------------------CCCCCCCccHHHHHHHHHHH
Confidence 998643 23334322100 0122 247999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhc----C-ccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ----G-NLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+ ..+++++++||+.|||+...+... ....+..++..+.. | ....+++++.+.++++|++|+|++++.+
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~ 224 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPS---NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 224 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTT---CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCC---CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHH
Confidence 886 458999999999999988732110 11223344444432 3 3344567788899999999999999999
Q ss_pred HHhccCC-----CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 316 MVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 316 ~~~~~~~-----~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+...... ...+++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 225 MELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp HHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCCS
T ss_pred HhCcccccccccccCCceEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 9743221 001468999998 77999999999999998654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=243.86 Aligned_cols=246 Identities=15% Similarity=0.178 Sum_probs=174.4
Q ss_pred EEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
+|||||||||||++++++|+++| ++ |+++.|...... ...+ .++. +.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~-~~~~--------------------------~~~~-~~~ 49 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK-FVNL--------------------------VDLN-IAD 49 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGG-GHHH--------------------------HTSC-CSE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCch-hhhc--------------------------Ccce-ecc
Confidence 48999999999999999999998 54 578888765421 1111 1222 678
Q ss_pred cCCCCCCCCCchhhHHHHhc-----CccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 93 DISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
|++ +.+.+..+.+ ++|+|||+|+.... ...+...+++|+.++.++++++.+. ++ +|||+||.++|
T Consensus 50 d~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 120 (310)
T 1eq2_A 50 YMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATY 120 (310)
T ss_dssp EEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGG
T ss_pred ccc-------cHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHh
Confidence 888 5555656665 49999999998654 3567888999999999999999986 67 99999999999
Q ss_pred cCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+...+ .++|+. +..+.+.|+.+|+.+|++++.+
T Consensus 121 g~~~~~~~~E~~----------------------------------------------~~~p~~~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 121 GGRTSDFIESRE----------------------------------------------YEKPLNVYGYSKFLFDEYVRQI 154 (310)
T ss_dssp TTCCSCBCSSGG----------------------------------------------GCCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------CCCCCChhHHHHHHHHHHHHHH
Confidence 86542 233321 1244578999999999999887
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc-ccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV-IMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..+++++++||+.|||+...+.. .....+..++..+..+....+++++.+ .++++|++|+|++++.++....
T Consensus 155 ~~~~g~~~~~lrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-- 229 (310)
T 1eq2_A 155 LPEANSQIVGFRYFNVYGPREGHKG---SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (310)
T ss_dssp GGGCSSCEEEEEECEEESSSCGGGG---GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHcCCCEEEEeCCcEECcCCCCCC---ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence 45899999999999998763211 011234455666666665556677778 8999999999999999997432
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
+++||++++ .++|+.|+++.+.+.+|.+
T Consensus 230 ---~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 230 ---SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp ---CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred ---CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 479999998 7799999999999999875
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=262.91 Aligned_cols=273 Identities=18% Similarity=0.192 Sum_probs=192.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++|+++|++.| ++|+|++|+........++.+.+.... +..+......+++++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~~---------~~~~~~~~~~~v~~v~ 217 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDYF---------SEETVEMMLSNIEVIV 217 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHHS---------CHHHHHHHSTTEEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHhc---------ccccchhccCceEEEe
Confidence 5799999999999999999998888 678999999886656666655432210 0001112247899999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|+++++. +. ...++|+|||+||..++...+..+.+.|+.++.+++++|.+ +.++|||+||.++ |....
T Consensus 218 ~Dl~d~~~-------l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~ 286 (508)
T 4f6l_B 218 GDFECMDD-------VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFD 286 (508)
T ss_dssp EBTTBCSS-------CC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEEC
T ss_pred cCCccccc-------CC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCc
Confidence 99997432 11 45789999999999887777888899999999999999998 6789999999999 54211
Q ss_pred -ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-hCCC
Q 015874 172 -LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENL 249 (399)
Q Consensus 172 -~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~~~ 249 (399)
...+.+++|+++.. ...+.+.|+.+|+.+|++++.+ ..|+
T Consensus 287 ~~~~~~~~~E~~~~~--------------------------------------~~~~~~~Y~~sK~~~E~~~~~~~~~gi 328 (508)
T 4f6l_B 287 IDTEDVTFSEADVYK--------------------------------------GQLLTSPYTRSKFYSELKVLEAVNNGL 328 (508)
T ss_dssp TTCSCCEECTTCSCS--------------------------------------SBCCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCcCcccccccccc--------------------------------------cccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 11223333332211 1135689999999999999988 6799
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.|||+..............+..++.....+..... +.++..++++|++|+|++++.++.... .+++|
T Consensus 329 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~~~~ 403 (508)
T 4f6l_B 329 DGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT----PQIIY 403 (508)
T ss_dssp EEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC----SCSEE
T ss_pred CEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC----CCCEE
Confidence 9999999999998873210001111234455655555433222 345789999999999999999987433 26899
Q ss_pred EecCCCCCcccHHHHHHHHHHhh
Q 015874 330 HVGSSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~~~ 352 (399)
|++++ +++|+.|+++.+.+..
T Consensus 404 nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 404 HVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp EESCS--CEEEHHHHHHHHHSSC
T ss_pred EeCCC--CCCCHHHHHHHHHHcC
Confidence 99999 7899999999999764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=239.11 Aligned_cols=264 Identities=18% Similarity=0.224 Sum_probs=182.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||++++++|+++| +.|+++.|.... ....+++.+. .+.++.++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~ 56 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIERL---------------------GGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHHH---------------------HTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCCcchhHHHHHHhh---------------------cCCcceEEE
Confidence 589999999999999999999999 456777764332 2222222110 024678899
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|+++ .+.+..+++ ++|+|||+||.... .+.+...+++|+.++.++++++++. ++++||++||.++|
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 128 (338)
T 1udb_A 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred ccCCC-------HHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHh
Confidence 99994 444445454 59999999997543 2456678999999999999999885 78899999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
+.... .+++|+.+. ..+.+.|+.+|+++|++++.+
T Consensus 129 g~~~~----~~~~e~~~~----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~ 164 (338)
T 1udb_A 129 GDNPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CSCCS----SSBCTTSCC----------------------------------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCcCcccCC----------------------------------------CCCCChHHHHHHHHHHHHHHHH
Confidence 86431 122222110 012468999999999999887
Q ss_pred -hC-CCcEEEEecCceecCCCCCCCCccc-C-cchHHHHHHHhhc--CccccccC------CCccccCeeeHHHHHHHHH
Q 015874 246 -KE-NLSLVIIRPTVVSGTYKEPFPGWVE-D-LKTINTLFVASAQ--GNLRCLVG------ETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 246 -~~-~~~~~i~Rp~~V~G~~~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~i~v~Dva~~i~ 313 (399)
.. +++++++||++|||+......+... . ...+...+..... +....+.+ ++.+.+++||++|+|++++
T Consensus 165 ~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~ 244 (338)
T 1udb_A 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_dssp HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHH
T ss_pred HhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHH
Confidence 33 7999999999999985421111110 0 0112223333322 22222222 4567899999999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.+++......+ +++||++++ .++|+.|+++.+++.+|.+
T Consensus 245 ~~l~~~~~~~~-~~~yni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 245 VAMEKLANKPG-VHIYNLGAG--VGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHTTCCE-EEEEEESCS--CCEEHHHHHHHHHHHHTSC
T ss_pred HHHhhhhccCC-CcEEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 99874321121 379999998 7799999999999999864
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-29 Score=242.28 Aligned_cols=258 Identities=15% Similarity=0.129 Sum_probs=190.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++|+|||||||||||++++++|+++| ++|++++|+...... .++.+ + + ...++++
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~-~-------------~------~~~~~~~ 56 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG---YEVYGADRRSGEFAS-WRLKE-L-------------G------IENDVKI 56 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCCSTTTT-HHHHH-T-------------T------CTTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCccccc-ccHhh-c-------------c------ccCceeE
Confidence 467999999999999999999999999 567899998754321 11111 0 0 0247889
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCC-ceEEEEecc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL-KVFVHVSTA 163 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~-~~~v~~SS~ 163 (399)
+.+|+++ .+.+.++++ ++|+|||+||.... .++++..+++|+.++.++++++.+. ++ ++|||+||.
T Consensus 57 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~ 128 (345)
T 2z1m_A 57 IHMDLLE-------FSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTS 128 (345)
T ss_dssp CCCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEG
T ss_pred EECCCCC-------HHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEech
Confidence 9999994 444545555 47999999997653 3567888999999999999999986 65 899999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
++||...+ .+++|+. +..+.+.|+.+|+++|.+++
T Consensus 129 ~vyg~~~~----~~~~e~~-----------------------------------------~~~~~~~Y~~sK~~~e~~~~ 163 (345)
T 2z1m_A 129 EMFGKVQE----IPQTEKT-----------------------------------------PFYPRSPYAVAKLFGHWITV 163 (345)
T ss_dssp GGGCSCSS----SSBCTTS-----------------------------------------CCCCCSHHHHHHHHHHHHHH
T ss_pred hhcCCCCC----CCCCccC-----------------------------------------CCCCCChhHHHHHHHHHHHH
Confidence 99986542 1222221 12345789999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
.+ +.+++++++|+.++||++... + +. ...+..++.+...+... .+.+++...++++|++|+|++++.++....
T Consensus 164 ~~~~~~~~~~~~~r~~~~~gpg~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~ 239 (345)
T 2z1m_A 164 NYREAYNMFACSGILFNHESPLRGI-E-FV--TRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE 239 (345)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT-T-SH--HHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred HHHHHhCCceEeeeeeeecCCCCCC-c-ch--hHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 87 458999999999999987521 1 11 11122334444455433 245777788999999999999999986322
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.++||++++ .++|+.|+++.+++.+|.+
T Consensus 240 -----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 240 -----PDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp -----CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred -----CceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 358999998 7799999999999999875
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-29 Score=243.72 Aligned_cols=280 Identities=15% Similarity=0.124 Sum_probs=193.1
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
++..++++|+|||||||||||++++++|+++| ++|++++|+.... +.+.+.+ ... .+
T Consensus 4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~---------~~~--------~~ 60 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKL---ANLQKRW---------DAK--------YP 60 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------HHH--------ST
T ss_pred CcccCCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCcccH---HHHHHHh---------hcc--------CC
Confidence 45567889999999999999999999999999 5678898865332 1111110 000 12
Q ss_pred CceEEE-eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 85 EKITFV-PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 85 ~~i~~~-~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.+++++ .+|+++++ .+..+++++|+|||+|+......++...+++|+.++.++++++.+..++++||++||.
T Consensus 61 ~~~~~~~~~D~~d~~-------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 61 GRFETAVVEDMLKQG-------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TTEEEEECSCTTSTT-------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CceEEEEecCCcChH-------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 468888 89999643 3334556899999999987766677889999999999999999853368999999999
Q ss_pred eeecCcC-----CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 164 YVAGERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 164 ~v~~~~~-----~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++|+... ..++|+.+. +..... .+ . ..+..+..+.+.|+.+|+++
T Consensus 134 ~~~~~~~~~~~~~~~~E~~~~-----~~~~~~-----~~-----------------~---~~~~~~~~~~~~Y~~sK~~~ 183 (342)
T 1y1p_A 134 VSALIPKPNVEGIYLDEKSWN-----LESIDK-----AK-----------------T---LPESDPQKSLWVYAASKTEA 183 (342)
T ss_dssp GGTCCCCTTCCCCEECTTCCC-----HHHHHH-----HH-----------------H---SCTTSTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcccCccccC-----chhhhh-----hc-----------------c---ccccccccchHHHHHHHHHH
Confidence 9986432 233443321 100000 00 0 00000112236799999999
Q ss_pred HHHHHHh--h--CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 239 EMLMQQS--K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 239 E~~l~~~--~--~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
|.+++.+ . .+++++++||+.|||+...+... . ..+..++..+..+....+.+++ +.++++|++|+|++++.
T Consensus 184 e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~ 258 (342)
T 1y1p_A 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLG 258 (342)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHH
Confidence 9999877 2 27899999999999987643211 1 2344566666676655545544 57899999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
++... ... +..| ++++ .++|+.|+++.+.+.+|..
T Consensus 259 ~~~~~-~~~--g~~~-~~~g--~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 259 CLVLP-QIE--RRRV-YGTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHCT-TCC--SCEE-EECC--EEECHHHHHHHHHHHCTTS
T ss_pred HHcCc-ccC--CceE-EEeC--CCCCHHHHHHHHHHHCCCc
Confidence 98742 222 3334 3344 5699999999999999864
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-29 Score=237.99 Aligned_cols=233 Identities=16% Similarity=0.112 Sum_probs=170.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++| ++|++++|++... ++ ..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R~~~~~---------------------------------~~---~~ 41 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSRKPGPG---------------------------------RI---TW 41 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------------EE---EH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCcC---------------------------------ee---ec
Confidence 789999999999999999999999 5668999976432 11 11
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccC------cc-ccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEEecce
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITK------FD-ERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVSTAY 164 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~------~~-~~~~~~~~~n~~~~~~ll~~a~~~~-~~~~~v~~SS~~ 164 (399)
| +.....++++|+|||+|+..- +. .....+.+.|+.++.+|++++.... +.++||+.||++
T Consensus 42 ~-----------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 42 D-----------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA 110 (298)
T ss_dssp H-----------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG
T ss_pred c-----------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee
Confidence 1 111234568999999998531 11 2345678889999999999998862 456799999999
Q ss_pred eecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 165 v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|+.... ...|+ +| ..+.+.|+..|...|....
T Consensus 111 vyg~~~~~~~~E~-----~p-----------------------------------------~~~~~~~~~~~~~~e~~~~ 144 (298)
T 4b4o_A 111 YYQPSLTAEYDED-----SP-----------------------------------------GGDFDFFSNLVTKWEAAAR 144 (298)
T ss_dssp GSCCCSSCCBCTT-----CC-----------------------------------------CSCSSHHHHHHHHHHHHHC
T ss_pred eecCCCCCccccc-----CC-----------------------------------------ccccchhHHHHHHHHHHHH
Confidence 9997653 22332 21 1334567777777776543
Q ss_pred HhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 244 QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 244 ~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
....+++++++||+.|||+... .+..++.....+.. ...+++++.++|||++|+|++++.+++... .
T Consensus 145 ~~~~~~~~~~~r~~~v~g~~~~----------~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~-~- 211 (298)
T 4b4o_A 145 LPGDSTRQVVVRSGVVLGRGGG----------AMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANH-V- 211 (298)
T ss_dssp CSSSSSEEEEEEECEEECTTSH----------HHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTT-C-
T ss_pred hhccCCceeeeeeeeEEcCCCC----------chhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCC-C-
Confidence 3367899999999999998751 12233433444433 345788999999999999999999997432 2
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
.++||++++ +++|+.|+++.+++.+|++.+.
T Consensus 212 --~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~~~ 242 (298)
T 4b4o_A 212 --HGVLNGVAP--SSATNAEFAQTFGAALGRRAFI 242 (298)
T ss_dssp --CEEEEESCS--CCCBHHHHHHHHHHHHTCCCCC
T ss_pred --CCeEEEECC--CccCHHHHHHHHHHHhCcCCcc
Confidence 469999999 8899999999999999976543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=234.09 Aligned_cols=224 Identities=17% Similarity=0.183 Sum_probs=173.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||| ||||++|+++|+++| ++|++++|+..... .+. ..+++++.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~~~------------------------~~~~~~~~ 53 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQG---WRIIGTSRNPDQME---AIR------------------------ASGAEPLL 53 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGT---CEEEEEESCGGGHH---HHH------------------------HTTEEEEE
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCC---CEEEEEEcChhhhh---hHh------------------------hCCCeEEE
Confidence 379999998 999999999999999 56799999865431 111 15789999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~ 170 (399)
+|+++. + +.++|+|||+|+....... .+.++++++++. .++++|||+||.++|+...
T Consensus 54 ~D~~d~-------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~ 111 (286)
T 3ius_A 54 WPGEEP-------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHD 111 (286)
T ss_dssp SSSSCC-------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCT
T ss_pred eccccc-------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCC
Confidence 999952 2 5689999999997654321 246788888874 3789999999999999764
Q ss_pred C-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 171 G-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 171 ~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
+ .++|+ .+ ..+.+.|+.+|+.+|++++.+ .++
T Consensus 112 ~~~~~E~-----~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~-~~~ 144 (286)
T 3ius_A 112 GAWVDET-----TP-----------------------------------------LTPTAARGRWRVMAEQQWQAV-PNL 144 (286)
T ss_dssp TCEECTT-----SC-----------------------------------------CCCCSHHHHHHHHHHHHHHHS-TTC
T ss_pred CCCcCCC-----CC-----------------------------------------CCCCCHHHHHHHHHHHHHHhh-cCC
Confidence 3 33333 21 244578999999999999986 689
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.|||+...++. .+..|....+.++ .+.++++|++|+|++++.++.... . +++|
T Consensus 145 ~~~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~--~--g~~~ 205 (286)
T 3ius_A 145 PLHVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD--P--GAVY 205 (286)
T ss_dssp CEEEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC--T--TCEE
T ss_pred CEEEEeccceECCCchHHH--------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC--C--CCEE
Confidence 9999999999998864321 1233444444444 478999999999999999998433 2 6799
Q ss_pred EecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 330 ni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
|++++ +++|+.|+++.+++.+|.++
T Consensus 206 ~i~~~--~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 206 NVCDD--EPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp EECCS--CCBCHHHHHHHHHHHHTCCC
T ss_pred EEeCC--CCccHHHHHHHHHHHcCCCC
Confidence 99998 77999999999999999764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=243.63 Aligned_cols=243 Identities=18% Similarity=0.212 Sum_probs=184.8
Q ss_pred CCcccHHhhcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 1 ~~~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
|+++.+...+++|+|||||||||||++++++|+++ |+ .+|.+++|+..+. ....+.+
T Consensus 10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~~---~~~~~~~----------------- 67 (344)
T 2gn4_A 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELKQ---SEMAMEF----------------- 67 (344)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHHH---HHHHHHH-----------------
T ss_pred CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhhH---HHHHHHh-----------------
Confidence 45667778899999999999999999999999999 84 2678998865322 1111111
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCce
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKV 156 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~ 156 (399)
...++.++.+|++ +.+.+..+++++|+|||+||.... ...+...+++|+.++.++++++.+. ++++
T Consensus 68 ---~~~~v~~~~~Dl~-------d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~ 136 (344)
T 2gn4_A 68 ---NDPRMRFFIGDVR-------DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQ 136 (344)
T ss_dssp ---CCTTEEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred ---cCCCEEEEECCCC-------CHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 1257899999999 556666788899999999997653 2456788999999999999999996 7899
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||..++. +.+.|+.+|+
T Consensus 137 ~V~~SS~~~~~-----------------------------------------------------------p~~~Y~~sK~ 157 (344)
T 2gn4_A 137 VIALSTDKAAN-----------------------------------------------------------PINLYGATKL 157 (344)
T ss_dssp EEEECCGGGSS-----------------------------------------------------------CCSHHHHHHH
T ss_pred EEEecCCccCC-----------------------------------------------------------CccHHHHHHH
Confidence 99999975432 2367999999
Q ss_pred HHHHHHHHhh-----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCc-cccccCCCccccCeeeHHHHHH
Q 015874 237 MGEMLMQQSK-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN-LRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 237 ~~E~~l~~~~-----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
++|.+++.+. .+++++++|||+|||+.. ..+..++..+..|. ...+ .++...++++|++|+|+
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----------~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~ 226 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----------SVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVS 226 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----------SHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----------CHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHH
Confidence 9999998872 579999999999999764 12234445555565 3333 35667889999999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
+++.++.... . +++|++.++ ++|+.|+++.+.+..+
T Consensus 227 ~v~~~l~~~~--~--g~~~~~~~~---~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 227 FVLKSLKRMH--G--GEIFVPKIP---SMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHHCC--S--SCEEEECCC---EEEHHHHHHHHCTTCC
T ss_pred HHHHHHhhcc--C--CCEEecCCC---cEEHHHHHHHHHHhCC
Confidence 9999998532 1 579998774 4999999999987653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=237.68 Aligned_cols=248 Identities=17% Similarity=0.152 Sum_probs=182.8
Q ss_pred EEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|||||||||||++++++|+++ | +.|+++.|+.... .++.++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~--------------------------------~~~~~~~ 45 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK---KNVIASDIVQRDT--------------------------------GGIKFIT 45 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG---GGEEEEESSCCCC--------------------------------TTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC---CEEEEecCCCccc--------------------------------cCceEEE
Confidence 4899999999999999999998 7 4568888875432 1456889
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~--~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
+|++ +.+.+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++++. ++++||++||.++|+
T Consensus 46 ~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 46 LDVS-------NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCC
T ss_pred ecCC-------CHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhC
Confidence 9999 4455556665 89999999997542 3467788999999999999999986 789999999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
.... ....+|+. +..+.+.|+.+|+++|.+++.+
T Consensus 118 ~~~~---~~~~~e~~-----------------------------------------~~~p~~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 118 PETP---KNKVPSIT-----------------------------------------ITRPRTMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp TTSC---SSSBCSSS-----------------------------------------CCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCccccc-----------------------------------------cCCCCchHHHHHHHHHHHHHHHHH
Confidence 6421 01111111 1244678999999999999876
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
..+++++++||+.+||+...+..... ......+.....+.....+++++..++++|++|+|++++.++.........
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTT---DYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSS---THHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred hcCCeEEEEecCcEeccCCCCCCcch---hHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 56899999999999998653322111 112223333333333344556678899999999999999998743221111
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+++||+++ ..+|+.|+++.+.+.++.
T Consensus 231 g~~~~i~~---~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 231 RNGYNVTA---YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp CSCEECCS---EEECHHHHHHHHHTTCCS
T ss_pred CceEecCC---ccccHHHHHHHHHHHCCc
Confidence 47899986 459999999999999874
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=239.57 Aligned_cols=246 Identities=20% Similarity=0.270 Sum_probs=186.7
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.+++|+|||||||||||++|+++|+++| ++|++++|+....... ... ..+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-----------------------~~~--l~~ 66 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQG---HEILVIDNFATGKREV-----------------------LPP--VAG 66 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEECCSSSCGGG-----------------------SCS--CTT
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCccchhh-----------------------hhc--cCC
Confidence 356788999999999999999999999999 5679999965432100 000 147
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~--~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
++++.+|++ +.+.+..+++ ++|+|||+||.... ...+. +++|+.++.++++++.+. ++++||++||
T Consensus 67 v~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS 136 (330)
T 2pzm_A 67 LSVIEGSVT-------DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQT 136 (330)
T ss_dssp EEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEE
T ss_pred ceEEEeeCC-------CHHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecC
Confidence 889999999 4555556677 89999999998654 23333 899999999999999985 7899999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++|+..... +.+++|+. .+.+.|+.+|+++|+++
T Consensus 137 ~~~~~~~~~~--~~~~~E~~-------------------------------------------~~~~~Y~~sK~~~e~~~ 171 (330)
T 2pzm_A 137 ALCYGRPATV--PIPIDSPT-------------------------------------------APFTSYGISKTAGEAFL 171 (330)
T ss_dssp GGGGCSCSSS--SBCTTCCC-------------------------------------------CCCSHHHHHHHHHHHHH
T ss_pred HHHhCCCccC--CCCcCCCC-------------------------------------------CCCChHHHHHHHHHHHH
Confidence 9999864320 01222211 23468999999999999
Q ss_pred HHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH-HHHHHHHhccC
Q 015874 243 QQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN-AMIVAMVAHAK 321 (399)
Q Consensus 243 ~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-~i~~~~~~~~~ 321 (399)
+.+ +++.+++||+++||++. . + ..+..++.....+. .+++++. .++++|++|+|+ +++.++.. ..
T Consensus 172 ~~~--~~~~~~iR~~~v~gp~~-~-~------~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~-~~ 237 (330)
T 2pzm_A 172 MMS--DVPVVSLRLANVTGPRL-A-I------GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEG-RP 237 (330)
T ss_dssp HTC--SSCEEEEEECEEECTTC-C-S------SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTT-CC
T ss_pred HHc--CCCEEEEeeeeeECcCC-C-C------CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhc-CC
Confidence 985 89999999999999874 1 1 12233444555554 3345555 889999999999 99988863 21
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 322 ~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
+++||++++ .++|+.|+++.+.+.+|..
T Consensus 238 ----g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 238 ----TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp ----CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred ----CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 579999998 7799999999999999876
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=238.74 Aligned_cols=244 Identities=22% Similarity=0.221 Sum_probs=181.0
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+....+++|+|||||||||||++++++|+++| ++|++++|+....... +.. .
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-----------------------l~~--~ 65 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERG---DKVVGIDNFATGRREH-----------------------LKD--H 65 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCGGG-----------------------SCC--C
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCCccchhh-----------------------Hhh--c
Confidence 44567889999999999999999999999999 5679999875432100 000 0
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCcc--ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKFD--ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~~--~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
.+++++.+|++ +.+.+..++++ +|+|||+|+..... .++. +++|+.++.++++++.+. ++++||++
T Consensus 66 ~~~~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 135 (333)
T 2q1w_A 66 PNLTFVEGSIA-------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF 135 (333)
T ss_dssp TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCceEEEEeCC-------CHHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 47889999999 45555566666 99999999986542 2333 899999999999999985 78999999
Q ss_pred ecceeec----CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC-chhhHhH
Q 015874 161 STAYVAG----ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP-NTYVFTK 235 (399)
Q Consensus 161 SS~~v~~----~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK 235 (399)
||.++|+ ...+.++|.. .+. +.|+.+|
T Consensus 136 SS~~~~g~~~~~~~~~~~E~~------------------------------------------------~p~~~~Y~~sK 167 (333)
T 2q1w_A 136 QTALCYGVKPIQQPVRLDHPR------------------------------------------------NPANSSYAISK 167 (333)
T ss_dssp EEGGGGCSCCCSSSBCTTSCC------------------------------------------------CCTTCHHHHHH
T ss_pred CcHHHhCCCcccCCCCcCCCC------------------------------------------------CCCCCchHHHH
Confidence 9999998 3321222221 123 6899999
Q ss_pred HHHHHHHHH-hhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 236 TMGEMLMQQ-SKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 236 ~~~E~~l~~-~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+++|++++. +. +++++||+.+||+.. . . ..+..++.....+. .+++ +...+++++++|+|++++.
T Consensus 168 ~~~E~~~~~s~~---~~~ilR~~~v~gp~~-~-~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 168 SANEDYLEYSGL---DFVTFRLANVVGPRN-V-S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHTC---CEEEEEESEEESTTC-C-S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhC---CeEEEeeceEECcCC-c-C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 999999988 53 899999999999873 1 1 22334455555554 3344 5678999999999999999
Q ss_pred HHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
++.... +++||++++ .++|+.|+++.+.+.+|.+
T Consensus 234 ~~~~~~-----g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 234 AVDGVG-----HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHTTCC-----CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHhcCC-----CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 986322 579999998 7799999999999999875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=241.20 Aligned_cols=259 Identities=16% Similarity=0.154 Sum_probs=188.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||++++++|+++| ++|++++|+.... ...+.+.+ .. ......+++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~l~~-------------~~----~~~~~~~~~~~ 84 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNTGRIEHLYK-------------NP----QAHIEGNMKLH 84 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTGGGC--------------------------CEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCccccchhhHHHHhh-------------hh----ccccCCCceEE
Confidence 689999999999999999999999 5678999986431 11110000 00 00012578899
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEec
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVST 162 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~---~~~v~~SS 162 (399)
.+|+++ .+.+..+++ ++|+|||+||.... .+++...+++|+.++.++++++.+. .+ ++||++||
T Consensus 85 ~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS 156 (375)
T 1t2a_A 85 YGDLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQAST 156 (375)
T ss_dssp ECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEE
T ss_pred EccCCC-------HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecc
Confidence 999994 444445555 47999999998654 2567788999999999999999985 55 79999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
.++|+...+ .+++|+.+ ..+.+.|+.+|+++|.++
T Consensus 157 ~~~~~~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~ 191 (375)
T 1t2a_A 157 SELYGKVQE----IPQKETTP-----------------------------------------FYPRSPYGAAKLYAYWIV 191 (375)
T ss_dssp GGGTCSCSS----SSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHH
T ss_pred hhhhCCCCC----CCCCccCC-----------------------------------------CCCCChhHHHHHHHHHHH
Confidence 999986532 12222221 134578999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
+.+ ..+++++++|++.+||+...+ .+.. ..+..++.....|... ...+++++.++++|++|+|++++.++...
T Consensus 192 ~~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~ 267 (375)
T 1t2a_A 192 VNFREAYNLFAVNGILFNHESPRRGA--NFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 267 (375)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHhCCCEEEEecccccCCCCCC--Ccch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcC
Confidence 877 458999999999999987521 1111 1223444455555433 34577788999999999999999999742
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
. .++||++++ .++|+.|+++.+++.+|.+
T Consensus 268 ~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 268 E-----PEDFVIATG--EVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp S-----CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred C-----CceEEEeCC--CcccHHHHHHHHHHHhCCC
Confidence 2 368999998 7799999999999999875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=234.83 Aligned_cols=226 Identities=19% Similarity=0.247 Sum_probs=178.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||+++++.|+++| ++|++++|. ++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------------~~ 40 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE---YDIYPFDKK------------------------------------------LL 40 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT---EEEEEECTT------------------------------------------TS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC---CEEEEeccc------------------------------------------cc
Confidence 489999999999999999999999 567888762 37
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+.+..+++ ++|+|||+|+..... ..+...+++|+.++.++++++++. ++ +|||+||.++|+
T Consensus 41 D~~-------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 41 DIT-------NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQ 111 (287)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcC
Confidence 888 4555556666 699999999987643 577888999999999999999986 55 699999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+ .+++|+.+ ..+.+.|+.+|+.+|++++.+
T Consensus 112 ~~~~----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~-- 144 (287)
T 3sc6_A 112 GDRP----EGYDEFHN-----------------------------------------PAPINIYGASKYAGEQFVKEL-- 144 (287)
T ss_dssp CCCS----SCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHH--
T ss_pred CCCC----CCCCCCCC-----------------------------------------CCCCCHHHHHHHHHHHHHHHh--
Confidence 6542 22333221 244678999999999999986
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
..+++++||+.|||+... ..+..++.....+....+.++ +.++++|++|+|++++.++.... ++
T Consensus 145 ~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~-----~~ 208 (287)
T 3sc6_A 145 HNKYFIVRTSWLYGKYGN---------NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL-----YG 208 (287)
T ss_dssp CSSEEEEEECSEECSSSC---------CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC-----CE
T ss_pred CCCcEEEeeeeecCCCCC---------cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC-----CC
Confidence 347899999999998652 223345555555655555544 78999999999999999997432 46
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
+||++++ .++|+.|+++.+++.+|.++.
T Consensus 209 ~~~i~~~--~~~s~~e~~~~i~~~~g~~~~ 236 (287)
T 3sc6_A 209 TYHVSNT--GSCSWFEFAKKIFSYANMKVN 236 (287)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHTCCCE
T ss_pred eEEEcCC--CcccHHHHHHHHHHHcCCCcc
Confidence 9999998 779999999999999997543
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=237.34 Aligned_cols=240 Identities=17% Similarity=0.103 Sum_probs=157.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++++++|+++| ++|++++|+... .+ ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---------------------------------~~--~~~ 43 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCGFRRAR---------------------------------PK--FEQ 43 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEccCCCC---------------------------------CC--eEE
Confidence 5899999999999999999999999 567888876432 11 567
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|++++ +.+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++.+. ++ +|||+||.++|
T Consensus 44 ~Dl~d~-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 114 (315)
T 2ydy_A 44 VNLLDS-------NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVF 114 (315)
T ss_dssp ---------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ecCCCH-------HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHc
Confidence 899853 32334444 59999999997653 3566778999999999999999986 55 99999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
+.....++|. .+ ..+.+.|+.+|..+|++++.+
T Consensus 115 ~~~~~~~~E~-----~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~- 147 (315)
T 2ydy_A 115 DGTNPPYREE-----DI-----------------------------------------PAPLNLYGKTKLDGEKAVLEN- 147 (315)
T ss_dssp CSSSCSBCTT-----SC-----------------------------------------CCCCSHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCCCC-----CC-----------------------------------------CCCcCHHHHHHHHHHHHHHHh-
Confidence 8633333333 21 134578999999999999985
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh-cCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
+++++++||+.|||+...+...+.. .++.... .+....+. +.+.++++|++|+|++++.++.........
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 218 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAVT------VMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSI 218 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTTG------GGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHHH------HHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCC
Confidence 5678999999999987632112222 2233333 44433333 356889999999999999988743111112
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 219 ~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 219 KGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp CEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred CCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 689999998 77999999999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=240.03 Aligned_cols=259 Identities=14% Similarity=0.104 Sum_probs=186.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
||+|||||||||||++++++|+++| ++|++++|+.... ..++.+.+ .. .....++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~-------------~~-----~~~~~~~~~ 59 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFNTERVDHIYQ-------------DP-----HTCNPKFHL 59 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC---------------------------------------CCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccchHHHHHHhh-------------cc-----ccCCCceEE
Confidence 4799999999999999999999999 5678888876431 11111100 00 001257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCC---ceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKL---KVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~---~~~v~~S 161 (399)
+.+|+++ .+.+..+++ ++|+|||+||.... .+.+...+++|+.++.++++++.+. ++ ++||++|
T Consensus 60 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~S 131 (372)
T 1db3_A 60 HYGDLSD-------TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQAS 131 (372)
T ss_dssp CCCCSSC-------HHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEE
T ss_pred EECCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeC
Confidence 9999994 444445555 47999999997643 2456778899999999999999986 55 7999999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|.++|+...+ .+++|+.+ ..+.+.|+.+|+++|.+
T Consensus 132 S~~v~g~~~~----~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~ 166 (372)
T 1db3_A 132 TSELYGLVQE----IPQKETTP-----------------------------------------FYPRSPYAVAKLYAYWI 166 (372)
T ss_dssp EGGGGTTCCS----SSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHH
T ss_pred ChhhhCCCCC----CCCCccCC-----------------------------------------CCCCChHHHHHHHHHHH
Confidence 9999986532 12222221 23457899999999999
Q ss_pred HHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 242 l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
++.+ ..+++++++|++.+||+.... .+.. ..+..++.....|... .+.+++++.++++|++|+|++++.++..
T Consensus 167 ~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~ 242 (372)
T 1db3_A 167 TVNYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ 242 (372)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS
T ss_pred HHHHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc
Confidence 9877 458999999999999987632 1111 2233445555566533 3457778899999999999999998863
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.. +++||++++ .++|+.|+++.+++.+|.+
T Consensus 243 ~~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 243 EQ-----PEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp SS-----CCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred CC-----CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 21 368999998 7799999999999999864
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=237.32 Aligned_cols=261 Identities=16% Similarity=0.109 Sum_probs=191.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCC----cCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN----VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~----V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+++|+|||||||||||++|+++|+++|+. +++|+++.|+...... ...
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------------~~~ 63 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------------GFS 63 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------------TCC
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------------ccC
Confidence 367899999999999999999999999931 1256888887643211 013
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc--cccHHHHHHHhHHHHHHHHHHHHhcc----CCceE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF--DERYDVAFGINTLGVIHLVNFAKKCV----KLKVF 157 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~--~~~~~~~~~~n~~~~~~ll~~a~~~~----~~~~~ 157 (399)
.++.++.+|+++ .+.+..++ .++|+|||+||.... .+++...+++|+.++.++++++++.. ++++|
T Consensus 64 ~~~~~~~~Dl~d-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 64 GAVDARAADLSA-------PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp SEEEEEECCTTS-------TTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CceeEEEcCCCC-------HHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 578899999995 44444555 489999999997642 35677889999999999999998863 27899
Q ss_pred EEEecceeecCcC-CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 158 VHVSTAYVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 158 v~~SS~~v~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
|++||.++|+... ..++|+ .+ ..+.+.|+.+|+
T Consensus 137 v~~SS~~~~~~~~~~~~~E~-----~~-----------------------------------------~~~~~~Y~~sK~ 170 (342)
T 2hrz_A 137 VFTSSIAVFGAPLPYPIPDE-----FH-----------------------------------------TTPLTSYGTQKA 170 (342)
T ss_dssp EEEEEGGGCCSSCCSSBCTT-----CC-----------------------------------------CCCSSHHHHHHH
T ss_pred EEeCchHhhCCCCCCCcCCC-----CC-----------------------------------------CCCcchHHHHHH
Confidence 9999999998642 223332 21 134578999999
Q ss_pred HHHHHHHHh--hCCCcEEEEecCceec-CCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 237 MGEMLMQQS--KENLSLVIIRPTVVSG-TYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 237 ~~E~~l~~~--~~~~~~~i~Rp~~V~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
++|.+++.+ ..+++.+++|++.||| ++. +... ....+..++.....+....++.+++..++++|++|+|++++
T Consensus 171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~ 246 (342)
T 2hrz_A 171 ICELLLSDYSRRGFFDGIGIRLPTICIRPGK-PNAA---ASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI 246 (342)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEECEETTCCSS-CCCS---GGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceeEEeeeEEecCCC-Ccch---hHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence 999999887 4478999999999998 443 1111 11234455566666665555555567788999999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.++.......+.+++||+++ .++|+.|+++.+++.+|..+
T Consensus 247 ~~~~~~~~~~~~~~~~ni~g---~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 247 HGAMIDVEKVGPRRNLSMPG---LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp HHHHSCHHHHCSCCEEECCC---EEEEHHHHHHHHHHHHCHHH
T ss_pred HHHhccccccCCccEEEcCC---CCCCHHHHHHHHHHHcCccc
Confidence 99874321001157999964 56999999999999998653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=259.50 Aligned_cols=269 Identities=19% Similarity=0.238 Sum_probs=197.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+.+|+|||||||||||++++++|+++ | ++|++++|+........ ...++
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g---~~V~~~~r~~~~~~~~~--------------------------~~~~v 362 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAISRFL--------------------------NHPHF 362 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSS---EEEEEEESCCTTTGGGT--------------------------TCTTE
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCC---CEEEEEEcCchhhhhhc--------------------------cCCce
Confidence 457899999999999999999999998 7 56799999865431100 12578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
+++.+|++++ .+....+++++|+|||+||.... ..++...+++|+.++.++++++.+. + ++|||+||.+
T Consensus 363 ~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~ 434 (660)
T 1z7e_A 363 HFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSE 434 (660)
T ss_dssp EEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGG
T ss_pred EEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHH
Confidence 9999999952 33344566789999999997653 3567788999999999999999986 5 8999999999
Q ss_pred eecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 165 v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|+.... .++|+ .+... ......+.+.|+.+|+++|++++
T Consensus 435 vyg~~~~~~~~E~-----~~~~~----------------------------------~~p~~~p~~~Y~~sK~~~E~~~~ 475 (660)
T 1z7e_A 435 VYGMCSDKYFDED-----HSNLI----------------------------------VGPVNKPRWIYSVSKQLLDRVIW 475 (660)
T ss_dssp GGBTCCSSSBCTT-----TCCEE----------------------------------ECCTTCTTHHHHHHHHHHHHHHH
T ss_pred HcCCCCCcccCCC-----ccccc----------------------------------cCcccCCCCCcHHHHHHHHHHHH
Confidence 9986532 23333 21000 00001334579999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCC-cccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPG-WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
.+ ..+++++++||+.|||+...+... .......+..++.....+....+++++.+.++++|++|+|++++.++....
T Consensus 476 ~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 555 (660)
T 1z7e_A 476 AYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG 555 (660)
T ss_dssp HHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred HHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcc
Confidence 76 458999999999999988632100 000112344556666677666666777889999999999999999997432
Q ss_pred CCCCCCcEEEecCCCCC-cccHHHHHHHHHHhhccCC
Q 015874 321 KQPSDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~-~~s~~el~~~l~~~~~~~~ 356 (399)
... .+++||++++ + ++|+.|+++.+.+.+|..+
T Consensus 556 ~~~-~g~~~ni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 556 NRC-DGEIINIGNP--ENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp GTT-TTEEEEECCG--GGEEEHHHHHHHHHHHHHHCT
T ss_pred ccC-CCeEEEECCC--CCCcCHHHHHHHHHHHhcCCC
Confidence 111 1689999987 5 6999999999999998753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=253.66 Aligned_cols=276 Identities=17% Similarity=0.172 Sum_probs=190.9
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+...+.+|+|||||||||||++|+++|+++| ++|++++|...... ..+++.. + ..
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~-~--------------------~~ 60 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEV-L--------------------TK 60 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHH-H--------------------HT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCcchHHHHHHHhh-c--------------------cC
Confidence 4456778999999999999999999999999 56788888764432 1222111 0 12
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.++.++.+|+++ .+.+..+++ ++|+|||+||.... .......+++|+.++.++++++++. ++++||+
T Consensus 61 ~~v~~v~~Dl~d-------~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~ 132 (699)
T 1z45_A 61 HHIPFYEVDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVF 132 (699)
T ss_dssp SCCCEEECCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CceEEEEcCCCC-------HHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 578899999994 445556666 89999999997653 2345677899999999999999886 7899999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.++|+.....-...+.+|+. +..+.+.|+.+|+++|
T Consensus 133 ~SS~~vyg~~~~~~~~~~~~E~~-----------------------------------------~~~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 133 SSSATVYGDATRFPNMIPIPEEC-----------------------------------------PLGPTNPYGHTKYAIE 171 (699)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTTS-----------------------------------------CCCCCSHHHHHHHHHH
T ss_pred ECcHHHhCCCccccccCCccccC-----------------------------------------CCCCCChHHHHHHHHH
Confidence 99999998642100001122211 1234578999999999
Q ss_pred HHHHHh--h--CCCcEEEEecCceecCCCCCCCCccc--CcchHHHHHHHhhcC--ccccccC------CCccccCeeeH
Q 015874 240 MLMQQS--K--ENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQG--NLRCLVG------ETKVIMDVIPV 305 (399)
Q Consensus 240 ~~l~~~--~--~~~~~~i~Rp~~V~G~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~i~v 305 (399)
++++.+ . .+++++++||+.|||+......+-.. ....+..++.....+ ....+++ ++.+.+++||+
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 999876 3 68999999999999986421111100 011222334444332 2333344 56788999999
Q ss_pred HHHHHHHHHHHHhcc---CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 306 DMVVNAMIVAMVAHA---KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~---~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+|+|++++.++.... ...+.+++||++++ .++|+.|+++.+++.+|.+.
T Consensus 252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCcHHHHHHHHHHHhCCCC
Confidence 999999999887421 11112579999998 77999999999999998754
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=232.68 Aligned_cols=232 Identities=20% Similarity=0.178 Sum_probs=177.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++++++|+ +| ++|++++|+.. ++.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r~~~--------------------------------------~~~~ 38 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDVHSK--------------------------------------EFCG 38 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECTTCS--------------------------------------SSCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEeccccc--------------------------------------cccc
Confidence 589999999999999999999 78 56788877641 2478
Q ss_pred cCCCCCCCCCchhhHHHHhcC--ccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+.+..++++ +|+|||+|+.... ...+...+++|+.++.++++++++. ++ +|||+||.++|+
T Consensus 39 D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFP 109 (299)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEe
Confidence 998 44555555654 9999999997653 3567888999999999999999986 55 799999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+ .+++|+.+ ..+.+.|+.+|+.+|++++.+
T Consensus 110 ~~~~----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~-- 142 (299)
T 1n2s_A 110 GTGD----IPWQETDA-----------------------------------------TSPLNVYGKTKLAGEKALQDN-- 142 (299)
T ss_dssp CCTT----CCBCTTSC-----------------------------------------CCCSSHHHHHHHHHHHHHHHH--
T ss_pred CCCC----CCCCCCCC-----------------------------------------CCCccHHHHHHHHHHHHHHHh--
Confidence 6542 12222221 234578999999999999986
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
..+++++||+.|||+... ..+..++.....+....+.++ +.++++|++|+|++++.++.........++
T Consensus 143 ~~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~ 211 (299)
T 1n2s_A 143 CPKHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (299)
T ss_dssp CSSEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred CCCeEEEeeeeecCCCcC---------cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCc
Confidence 348999999999998752 123344555555554444443 789999999999999999975421110157
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
+||++++ +++|+.|+++.+.+.+|.+
T Consensus 212 ~~~i~~~--~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 212 LYHLVAG--GTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHH
T ss_pred eEEEeCC--CCCCHHHHHHHHHHHhCCC
Confidence 9999998 7799999999999999875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=224.81 Aligned_cols=222 Identities=16% Similarity=0.107 Sum_probs=163.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+|||||||||++++++|+++| ++|++++|+...... ...++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~----------------------------~~~~~~~~~ 52 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG---FEVTAVVRHPEKIKI----------------------------ENEHLKVKK 52 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT---CEEEEECSCGGGCCC----------------------------CCTTEEEEC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEcCcccchh----------------------------ccCceEEEE
Confidence 4799999999999999999999999 667999998654311 126789999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|++ +.+.+..+++++|+|||+|+..... ...+++|+.++.++++++++. ++++||++||.+++....+
T Consensus 53 ~Dl~-------d~~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~ 121 (227)
T 3dhn_A 53 ADVS-------SLDEVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPG 121 (227)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETT
T ss_pred ecCC-------CHHHHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCC
Confidence 9999 5566668888999999999864221 225778999999999999996 7899999999987765443
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCCC
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENL 249 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~ 249 (399)
...|+ .+..+.+.|+.+|+.+|.+++.+ ..++
T Consensus 122 ~~~~~----------------------------------------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~ 155 (227)
T 3dhn_A 122 LRLMD----------------------------------------------SGEVPENILPGVKALGEFYLNFLMKEKEI 155 (227)
T ss_dssp EEGGG----------------------------------------------TTCSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred Ccccc----------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhhccCc
Confidence 22221 11134568999999999888877 5689
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.|||+.... +... ..+..+...++ .++++|++|+|++++.++.... .. +++|
T Consensus 156 ~~~ilrp~~v~g~~~~~--~~~~------------~~~~~~~~~~~---~~~~i~~~Dva~ai~~~l~~~~-~~--g~~~ 215 (227)
T 3dhn_A 156 DWVFFSPAADMRPGVRT--GRYR------------LGKDDMIVDIV---GNSHISVEDYAAAMIDELEHPK-HH--QERF 215 (227)
T ss_dssp EEEEEECCSEEESCCCC--CCCE------------EESSBCCCCTT---SCCEEEHHHHHHHHHHHHHSCC-CC--SEEE
T ss_pred cEEEEeCCcccCCCccc--ccee------------ecCCCcccCCC---CCcEEeHHHHHHHHHHHHhCcc-cc--CcEE
Confidence 99999999999987632 1110 11122222222 2899999999999999998433 22 7899
Q ss_pred EecCCCCCcccHHH
Q 015874 330 HVGSSLRNPVTLVS 343 (399)
Q Consensus 330 ni~~~~~~~~s~~e 343 (399)
+++++ ++.++++
T Consensus 216 ~~~~~--~~~~~~~ 227 (227)
T 3dhn_A 216 TIGYL--EHHHHHH 227 (227)
T ss_dssp EEECC--SCCC---
T ss_pred EEEee--hhcccCC
Confidence 99999 6677653
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-28 Score=237.87 Aligned_cols=257 Identities=14% Similarity=0.108 Sum_probs=187.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc--HHHHHHHHHhhhhhHHHHHhhhcccccccccC-ceEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFISE-KITF 89 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~i~~ 89 (399)
|+|||||||||||++|+++|+++| ++|++++|+..... .++.+.+.+ ..... ++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 87 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNTQRINHIYIDP------------------HNVNKALMKL 87 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTTTTC--------------------------CCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCCccccchhhhhhhhcc------------------ccccccceEE
Confidence 589999999999999999999999 56799999865311 111000000 00012 7889
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCc-----eEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLK-----VFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~-----~~v~ 159 (399)
+.+|+++ .+.+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++.+. .++ +|||
T Consensus 88 ~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~ 159 (381)
T 1n7h_A 88 HYADLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQ 159 (381)
T ss_dssp EECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEE
T ss_pred EECCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEE
Confidence 9999994 444445555 47999999998654 2567788999999999999999885 444 9999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.++|+...+. ++|+.+ ..+.+.|+.+|+++|
T Consensus 160 ~SS~~vyg~~~~~-----~~E~~~-----------------------------------------~~~~~~Y~~sK~~~E 193 (381)
T 1n7h_A 160 AGSSEMFGSTPPP-----QSETTP-----------------------------------------FHPRSPYAASKCAAH 193 (381)
T ss_dssp EEEGGGGTTSCSS-----BCTTSC-----------------------------------------CCCCSHHHHHHHHHH
T ss_pred eCcHHHhCCCCCC-----CCCCCC-----------------------------------------CCCCCchHHHHHHHH
Confidence 9999999975432 232221 234578999999999
Q ss_pred HHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHH
Q 015874 240 MLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 240 ~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+++.+ ..+++++++|++++||+.... .+.. ..+..++.....+... ...+++.+.++++|++|+|++++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~ 269 (381)
T 1n7h_A 194 WYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLML 269 (381)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHH
Confidence 999887 458999999999999987521 1111 1123344445555433 34577788999999999999999998
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.... +++||++++ .++|+.|+++.+++.+|.+
T Consensus 270 ~~~~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 270 QQEK-----PDDYVVATE--EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp TSSS-----CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred hCCC-----CCeEEeeCC--CCCcHHHHHHHHHHHcCCC
Confidence 6322 368999998 7799999999999999864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-28 Score=228.81 Aligned_cols=226 Identities=18% Similarity=0.185 Sum_probs=174.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
-+.|+|||||||||||++++++|+++| ++|++++|+
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~----------------------------------------- 45 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKN---VEVIPTDVQ----------------------------------------- 45 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTT-----------------------------------------
T ss_pred cccceEEEECCCChHHHHHHHHHHhCC---CeEEeccCc-----------------------------------------
Confidence 345899999999999999999999999 566887663
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
.+|++ +.+.+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++.+. ++ +|||+||.+
T Consensus 46 -~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~ 115 (292)
T 1vl0_A 46 -DLDIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDY 115 (292)
T ss_dssp -TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGG
T ss_pred -cCCCC-------CHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHH
Confidence 36777 4444556666 79999999997653 3567888999999999999999986 66 999999999
Q ss_pred eecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 165 v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|+...+ .++|+ .+ ..+.+.|+.+|+.+|.+++
T Consensus 116 v~~~~~~~~~~E~-----~~-----------------------------------------~~~~~~Y~~sK~~~E~~~~ 149 (292)
T 1vl0_A 116 VFDGEAKEPITEF-----DE-----------------------------------------VNPQSAYGKTKLEGENFVK 149 (292)
T ss_dssp GSCSCCSSCBCTT-----SC-----------------------------------------CCCCSHHHHHHHHHHHHHH
T ss_pred eECCCCCCCCCCC-----CC-----------------------------------------CCCccHHHHHHHHHHHHHH
Confidence 9986532 23332 21 2345789999999999999
Q ss_pred HhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 244 QSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 244 ~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
.+ +.+++++||+.|||+ . +. .+..++.....+....+.+ ++.++++|++|+|++++.++... .
T Consensus 150 ~~--~~~~~~lR~~~v~G~-~---~~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~---~ 212 (292)
T 1vl0_A 150 AL--NPKYYIVRTAWLYGD-G---NN------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK---N 212 (292)
T ss_dssp HH--CSSEEEEEECSEESS-S---SC------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT---C
T ss_pred hh--CCCeEEEeeeeeeCC-C---cC------hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC---C
Confidence 86 347999999999998 3 11 2233444444454444444 36889999999999999999753 2
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 213 --~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 213 --YGTFHCTCK--GICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp --CEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred --CcEEEecCC--CCccHHHHHHHHHHHhCCCC
Confidence 689999998 77999999999999998753
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-27 Score=228.84 Aligned_cols=262 Identities=16% Similarity=0.174 Sum_probs=169.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
||+|||||||||||++++++|+++| ++|++++| +.........+.+ + . ....+++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~-~-----------------~-~~~~~~~~~ 58 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPERKRDVSFLTN-L-----------------P-GASEKLHFF 58 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCCC----CCCHHHHT-S-----------------T-THHHHEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCC---CEEEEEEeCCccchhHHHHHHh-h-----------------h-ccCCceEEE
Confidence 5899999999999999999999999 55688888 5422111111110 0 0 001367889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-cc-HHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee-c
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ER-YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA-G 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~-~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~-~ 167 (399)
.+|+++ .+.+..+++++|+|||+|+...+. .+ ...++++|+.++.++++++.+..++++|||+||.+++ +
T Consensus 59 ~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~ 131 (322)
T 2p4h_X 59 NADLSN-------PDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSF 131 (322)
T ss_dssp CCCTTC-------GGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSC
T ss_pred ecCCCC-------HHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHccc
Confidence 999994 455557788999999999865332 22 3458899999999999999885357899999998754 3
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hhhHhHHHHHHHHHHh-
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~~~- 245 (399)
.... ...++|+.+.+.+.. .+..+.. .|+.||+++|.++.++
T Consensus 132 ~~~~---~~~~~e~~~~~~~~~---------------------------------~~~~p~~~~Y~~sK~~~e~~~~~~~ 175 (322)
T 2p4h_X 132 NGKD---KDVLDESDWSDVDLL---------------------------------RSVKPFGWNYAVSKTLAEKAVLEFG 175 (322)
T ss_dssp SSSC---CSEECTTCCCCHHHH---------------------------------HHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CeecCCccccchhhh---------------------------------cccCcccccHHHHHHHHHHHHHHHH
Confidence 2211 112222222111100 0001122 6999999999999877
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||+...+. . ......+.....|....+ +. ..++++|++|+|++++.++.. ...
T Consensus 176 ~~~gi~~~~lrp~~v~g~~~~~~---~---~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~-~~~-- 243 (322)
T 2p4h_X 176 EQNGIDVVTLILPFIVGRFVCPK---L---PDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLEN-SVP-- 243 (322)
T ss_dssp HHTTCCEEEEEECEEESCCCSSS---C---CHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHS-CCC--
T ss_pred HhcCCcEEEEcCCceECCCCCCC---C---CchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhC-cCC--
Confidence 4689999999999999875321 1 111111112233332222 22 234899999999999999863 222
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
.+.|| +++ .++|+.|+++.+.+.++.
T Consensus 244 -~g~~~-~~~--~~~s~~e~~~~i~~~~~~ 269 (322)
T 2p4h_X 244 -GGRYN-CSP--FIVPIEEMSQLLSAKYPE 269 (322)
T ss_dssp -CEEEE-CCC--EEEEHHHHHHHHHHHCTT
T ss_pred -CCCEE-EcC--CCCCHHHHHHHHHHhCCC
Confidence 23598 455 679999999999988753
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=234.81 Aligned_cols=262 Identities=18% Similarity=0.195 Sum_probs=170.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++|+++|+++| ++|.+++|+.+.......+.+ + + ...+++++.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~r~~~~~~~~~~~~~-~-------------~------~~~~~~~~~ 65 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG---YAVNTTVRDPDNQKKVSHLLE-L-------------Q------ELGDLKIFR 65 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEESCTTCTTTTHHHHH-H-------------G------GGSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCcchhhhHHHHHh-c-------------C------CCCcEEEEe
Confidence 6899999999999999999999999 556888887654322211110 0 0 124788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccH-HHHHHHhHHHHHHHHHHHHhccCCceEEEEecce-eecC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERY-DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY-VAGE 168 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~-~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~-v~~~ 168 (399)
+|++++ +.+..+++++|+|||+|+..... ..+ ...+++|+.++.++++++.+..++++|||+||.+ +|+.
T Consensus 66 ~Dl~d~-------~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 66 ADLTDE-------LSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp CCTTTS-------SSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred cCCCCh-------HHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 999953 33446678899999999976432 222 3478999999999999999863489999999987 4432
Q ss_pred cC-C---ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC-CchhhHhHHHHHHHHH
Q 015874 169 RT-G---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 169 ~~-~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~l~ 243 (399)
.. + .++|+... +.+.. .+..+ ...|+.||.++|.+++
T Consensus 139 ~~~~~~~~~~E~~~~-----~~~~~---------------------------------~~~~~~~~~Y~~sK~~~E~~~~ 180 (338)
T 2rh8_A 139 QLDGTGLVVDEKNWT-----DIEFL---------------------------------TSAKPPTWGYPASKTLAEKAAW 180 (338)
T ss_dssp HHTCSCCCCCTTTTT-----CC----------------------------------------CCCCCCTTSCCHHHHHHH
T ss_pred CcCCCCcccChhhcc-----chhhc---------------------------------cccCCccchHHHHHHHHHHHHH
Confidence 11 1 23333221 10000 00111 1259999999999998
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc-CC----CccccCeeeHHHHHHHHHHHH
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GE----TKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+ ..+++++++||+.|||+...+. .. ..+ ..+.....|....+. .. +...++++|++|+|++++.++
T Consensus 181 ~~~~~~gi~~~~lrp~~v~Gp~~~~~---~~--~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 254 (338)
T 2rh8_A 181 KFAEENNIDLITVIPTLMAGSSLTSD---VP--SSI-GLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVA 254 (338)
T ss_dssp HHHHHHTCCEEEEEECEEESCCSSSS---CC--HHH-HHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEeCCceECCCCCCC---CC--chH-HHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHH
Confidence 76 3589999999999999976321 11 111 111122233222111 00 012348999999999999988
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+. ... .+.|+++++ .+|+.|+++.+.+.++.
T Consensus 255 ~~-~~~---~~~~~~~~~---~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 255 EK-ESA---SGRYICCAA---NTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HC-TTC---CEEEEECSE---EECHHHHHHHHHHHCTT
T ss_pred cC-CCc---CCcEEEecC---CCCHHHHHHHHHHhCCC
Confidence 63 221 357888763 48999999999998753
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=227.46 Aligned_cols=262 Identities=15% Similarity=0.161 Sum_probs=172.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|||||||||||++++++|+++| ++|++++|+.+.......+.+ + . ....+++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-~-----------------~-~~~~~~~~~ 61 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPTNVKKVKHLLD-L-----------------P-KAETHLTLW 61 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCTTCHHHHHHHHT-S-----------------T-THHHHEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEECCcchhHHHHHHHh-c-----------------c-cCCCeEEEE
Confidence 67899999999999999999999999 566888887653212111110 0 0 001368899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-cc-HHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce-eec
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ER-YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY-VAG 167 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~-~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~-v~~ 167 (399)
.+|+++ .+.+..+++++|+|||+|+...+. .+ ....+++|+.++.++++++.+...+++|||+||.+ +|+
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 62 KADLAD-------EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp ECCTTS-------TTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred EcCCCC-------HHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 999995 344446678999999999976432 22 34578999999999999998863389999999987 454
Q ss_pred CcC--CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 168 ERT--GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 168 ~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
... ..++|+. +...+... ....+.+.|+.+|.++|.++..+
T Consensus 135 ~~~~~~~~~E~~-----~~~~~~~~--------------------------------~~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 135 QEHQLPVYDESC-----WSDMEFCR--------------------------------AKKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp SSSCCSEECTTC-----CCCHHHHH--------------------------------HHCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCccc-----CCchhhhc--------------------------------ccCCccchHHHHHHHHHHHHHHH
Confidence 321 1233332 21111100 00113357999999999999876
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||+.|||+...+. + . ..+.. ......|.... .+.. ....++|++|+|++++.++.. ...
T Consensus 178 ~~~~gi~~~~lrp~~v~Gp~~~~~--~-~--~~~~~-~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~~~~-~~~- 247 (337)
T 2c29_D 178 AKENNIDFITIIPTLVVGPFIMSS--M-P--PSLIT-ALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYLFEN-PKA- 247 (337)
T ss_dssp HHHHTCCEEEEEECEEESCCSCSS--C-C--HHHHH-HTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHHHHC-TTC-
T ss_pred HHHcCCcEEEEeCCceECCCCCCC--C-C--chHHH-HHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHHhcC-ccc-
Confidence 4689999999999999876321 1 1 01001 10112232221 1211 124499999999999998863 221
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
.+.|++++ ..+|+.|+++.+.+.++
T Consensus 248 --~~~~~~~~---~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 248 --EGRYICSS---HDCIILDLAKMLREKYP 272 (337)
T ss_dssp --CEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred --CceEEEeC---CCCCHHHHHHHHHHHCC
Confidence 34687665 45899999999999874
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=227.62 Aligned_cols=252 Identities=15% Similarity=0.122 Sum_probs=182.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCC--CcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQP--NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~--~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+|+|||||||||||++++++|+++|. .+++|++++|+...... ...++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~----------------------------~~~~~~~ 52 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH----------------------------EDNPINY 52 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC----------------------------CSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc----------------------------ccCceEE
Confidence 58999999999999999999999881 12356899998654310 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcC---ccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-cCCceEE-------
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNE---LDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-VKLKVFV------- 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~---~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v------- 158 (399)
+.+|++ +.+.+..++++ +|+|||+|+... .++...+++|+.++.++++++++. .++++||
T Consensus 53 ~~~Dl~-------d~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i 123 (364)
T 2v6g_A 53 VQCDIS-------DPDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 123 (364)
T ss_dssp EECCTT-------SHHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHH
T ss_pred EEeecC-------CHHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceE
Confidence 999999 45555566776 999999999763 456778999999999999999984 2588997
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
|+||.++||.... ...+++|+.+. ....+.| +.+
T Consensus 124 ~~Ss~~vyg~~~~--~~~~~~E~~~~----------------------------------------~~~~~~y----~~~ 157 (364)
T 2v6g_A 124 YMGPFESYGKIES--HDPPYTEDLPR----------------------------------------LKYMNFY----YDL 157 (364)
T ss_dssp HHCCGGGTTTSCC--CCSSBCTTSCC----------------------------------------CSSCCHH----HHH
T ss_pred EEechhhcccccc--CCCCCCccccC----------------------------------------Cccchhh----HHH
Confidence 8999999986420 01222332211 0124567 468
Q ss_pred HHHHHHh--hCC-CcEEEEecCceecCCCCCCCCcccCcchHHHH-HHHh--hcCccccccCCC---ccccCeeeHHHHH
Q 015874 239 EMLMQQS--KEN-LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTL-FVAS--AQGNLRCLVGET---KVIMDVIPVDMVV 309 (399)
Q Consensus 239 E~~l~~~--~~~-~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~---~~~~~~i~v~Dva 309 (399)
|++++++ ..+ ++++++||+.|||+....... .....+ +... ..|....+++++ ...+++++++|+|
T Consensus 158 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva 232 (364)
T 2v6g_A 158 EDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN-----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA 232 (364)
T ss_dssp HHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC-----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHH
T ss_pred HHHHHHHhhcCCCceEEEECCCceeCCCCCcccc-----hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHH
Confidence 8888876 355 999999999999988732111 111221 2222 245555556666 3457889999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++++.++..... . +++||++++ .++|+.|+++.+++.+|.+.
T Consensus 233 ~a~~~~~~~~~~-~--g~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 233 EHHIWAAVDPYA-K--NEAFNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp HHHHHHHHCGGG-T--TEEEEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHhCCCC-C--CceEEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 999999974321 2 579999998 67999999999999998754
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-27 Score=243.48 Aligned_cols=236 Identities=14% Similarity=0.123 Sum_probs=171.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||||++|++.|+++| ++|++++|+.... ..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R~~~~~-----------------------------------~~v~ 188 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVRKEPKP-----------------------------------GKRF 188 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSSCCT-----------------------------------TCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCc-----------------------------------ccee
Confidence 7899999999999999999999999 5679999987542 1256
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
+|+.+. . ...+.++|+|||+|+.... ......++++|+.++.++++++....++++|||+||+++||
T Consensus 189 ~d~~~~-----~----~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 189 WDPLNP-----A----SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCTTSC-----C----TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ecccch-----h----HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 777632 1 1345789999999998632 34567789999999999999944434789999999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-h
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-K 246 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~ 246 (399)
.... ...++|+.+ .+.+.|+.+|...|.++..+ .
T Consensus 260 ~~~~---~~~~~E~~~------------------------------------------~~~~~y~~~~~~~E~~~~~~~~ 294 (516)
T 3oh8_A 260 HDRG---DEILTEESE------------------------------------------SGDDFLAEVCRDWEHATAPASD 294 (516)
T ss_dssp SEEE---EEEECTTSC------------------------------------------CCSSHHHHHHHHHHHTTHHHHH
T ss_pred CCCC---CCccCCCCC------------------------------------------CCcChHHHHHHHHHHHHHHHHh
Confidence 3211 112222221 13467999999999887765 6
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.|++++++||+.|||+..+ .+..++.....+. ....+++++.+++||++|+|++++.++.... . .
T Consensus 295 ~gi~~~ilRp~~v~Gp~~~----------~~~~~~~~~~~g~-~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~---~ 359 (516)
T 3oh8_A 295 AGKRVAFIRTGVALSGRGG----------MLPLLKTLFSTGL-GGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-I---S 359 (516)
T ss_dssp TTCEEEEEEECEEEBTTBS----------HHHHHHHTTC----CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT-C---C
T ss_pred CCCCEEEEEeeEEECCCCC----------hHHHHHHHHHhCC-CcccCCCCceEceEeHHHHHHHHHHHHhCcc-c---C
Confidence 7999999999999997741 1222333333333 2355778899999999999999999997432 2 4
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++||++++ +++|+.|+++.+++.+|.++
T Consensus 360 g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 360 GPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp EEEEESCS--CCEEHHHHHHHTTC------
T ss_pred CcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 68999999 78999999999999998754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-27 Score=222.20 Aligned_cols=219 Identities=13% Similarity=0.198 Sum_probs=169.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|+|||||||||++++++|+++ | ++|++++|+...... +. ..+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~---l~------------------------~~~~~~~ 50 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA---SQIIAIVRNVEKAST---LA------------------------DQGVEVR 50 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTTHH---HH------------------------HTTCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC---CeEEEEEcCHHHHhH---Hh------------------------hcCCeEE
Confidence 57999999999999999999998 8 567999997654321 11 1468899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|++ +.+.+..+++++|+|||+|+.. . . . +.|+.++.++++++++. ++++|||+||.+++..
T Consensus 51 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~-~-~--~---~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-- 113 (287)
T 2jl1_A 51 HGDYN-------QPESLQKAFAGVSKLLFISGPH-Y-D--N---TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES-- 113 (287)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECCCCC-S-C--H---HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC--
T ss_pred EeccC-------CHHHHHHHHhcCCEEEEcCCCC-c-C--c---hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC--
Confidence 99999 5566667888999999999862 1 1 1 57899999999999986 7899999999977521
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
+..|+.+|..+|++++. .+++
T Consensus 114 ---------------------------------------------------------~~~y~~~K~~~E~~~~~--~~~~ 134 (287)
T 2jl1_A 114 ---------------------------------------------------------IIPLAHVHLATEYAIRT--TNIP 134 (287)
T ss_dssp ---------------------------------------------------------CSTHHHHHHHHHHHHHH--TTCC
T ss_pred ---------------------------------------------------------CCchHHHHHHHHHHHHH--cCCC
Confidence 24699999999999986 6899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
++++||+.++|+.. .. .+...+ ..+... ...++..++++|++|+|++++.++.... .. +++||
T Consensus 135 ~~ilrp~~~~~~~~---~~------~~~~~~---~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~--g~~~~ 197 (287)
T 2jl1_A 135 YTFLRNALYTDFFV---NE------GLRAST---ESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEG-HE--NKTYN 197 (287)
T ss_dssp EEEEEECCBHHHHS---SG------GGHHHH---HHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSS-CT--TEEEE
T ss_pred eEEEECCEeccccc---hh------hHHHHh---hCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCC-CC--CcEEE
Confidence 99999999887531 11 111111 123222 3345678899999999999999997422 22 68999
Q ss_pred ecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 331 i~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++++ .++|+.|+++.+.+.+|.+.
T Consensus 198 i~~~--~~~s~~e~~~~i~~~~g~~~ 221 (287)
T 2jl1_A 198 LVSN--QPWTFDELAQILSEVSGKKV 221 (287)
T ss_dssp ECCS--SCBCHHHHHHHHHHHHSSCC
T ss_pred ecCC--CcCCHHHHHHHHHHHHCCcc
Confidence 9998 67999999999999999754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=235.33 Aligned_cols=215 Identities=18% Similarity=0.181 Sum_probs=171.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++|+ .+|++ +
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v~~-----------------------------------------------~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD--HHIFE-----------------------------------------------V 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--CEEEE-----------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEE-----------------------------------------------E
Confidence 6899999999999999999999984 03333 3
Q ss_pred cC-CCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEecceeecCcC
Q 015874 93 DI-SSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAYVAGERT 170 (399)
Q Consensus 93 Dl-~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~-~~v~~SS~~v~~~~~ 170 (399)
|+ . +.+.+..+++++|+|||+|+.... +.+...++.|+.++.++++++++. +++ +|||+||.++|+
T Consensus 32 d~~~-------d~~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 32 HRQT-------KEEELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CTTC-------CHHHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---
T ss_pred CCCC-------CHHHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---
Confidence 44 3 445555677789999999998654 344556788999999999999986 665 999999998877
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCC
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KEN 248 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~ 248 (399)
.+.|+.+|+++|++++.+ +.+
T Consensus 100 ---------------------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~g 122 (369)
T 3st7_A 100 ---------------------------------------------------------DNPYGESKLQGEQLLREYAEEYG 122 (369)
T ss_dssp ---------------------------------------------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------CCCchHHHHHHHHHHHHHHHHhC
Confidence 157999999999999987 468
Q ss_pred CcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcE
Q 015874 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 249 ~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
++++++||+.|||+...+. ....+..++.....+....+ .++++.++++|++|+|++++.++...... .+++
T Consensus 123 ~~~~i~R~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~--~~~~ 194 (369)
T 3st7_A 123 NTVYIYRWPNLFGKWCKPN-----YNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTI--ENGV 194 (369)
T ss_dssp CCEEEEEECEEECTTCCTT-----SSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCE--ETTE
T ss_pred CCEEEEECCceeCCCCCCC-----cchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCccc--CCce
Confidence 9999999999999987442 11344456666666665444 46788999999999999999999853321 1479
Q ss_pred EEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 329 YHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 329 yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
||++++ +++|+.|+++.+++.+|.+
T Consensus 195 ~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 195 PTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp ECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred EEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 999998 7899999999999999865
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=216.71 Aligned_cols=218 Identities=17% Similarity=0.221 Sum_probs=164.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+|+|||||||||++++++|+++| ++|.+++|+..+... +. ..++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~---~~------------------------~~~~ 66 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQGPE---LR------------------------ERGA 66 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGGHHH---HH------------------------HTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHHHHH---HH------------------------hCCC
Confidence 55789999999999999999999999999 567999998654321 11 1478
Q ss_pred -EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 88 -TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 88 -~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+++.+|++ . . +.+.++++|+|||+||.... ..++..+++|+.++.++++++++. ++++||++||.+.+
T Consensus 67 ~~~~~~Dl~-~-----~---~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 67 SDIVVANLE-E-----D---FSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTV 135 (236)
T ss_dssp SEEEECCTT-S-----C---CGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCS
T ss_pred ceEEEcccH-H-----H---HHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCC
Confidence 89999998 1 1 12446799999999997543 567888999999999999999886 78999999996543
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
... .. + .+.+.|+.+|+.+|.+++.
T Consensus 136 ~~~------~~-----~------------------------------------------~~~~~Y~~sK~~~e~~~~~-- 160 (236)
T 3e8x_A 136 DPD------QG-----P------------------------------------------MNMRHYLVAKRLADDELKR-- 160 (236)
T ss_dssp CGG------GS-----C------------------------------------------GGGHHHHHHHHHHHHHHHH--
T ss_pred CCC------CC-----h------------------------------------------hhhhhHHHHHHHHHHHHHH--
Confidence 321 00 0 1235799999999999985
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.++|+... + .. .....+...+++++++|+|++++.++.... .. +
T Consensus 161 ~gi~~~~lrpg~v~~~~~~---~------------------~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~--g 215 (236)
T 3e8x_A 161 SSLDYTIVRPGPLSNEEST---G------------------KV-TVSPHFSEITRSITRHDVAKVIAELVDQQH-TI--G 215 (236)
T ss_dssp SSSEEEEEEECSEECSCCC---S------------------EE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGG-GT--T
T ss_pred CCCCEEEEeCCcccCCCCC---C------------------eE-EeccCCCcccCcEeHHHHHHHHHHHhcCcc-cc--C
Confidence 7999999999999997541 1 11 112233446899999999999999997432 22 6
Q ss_pred cEEEecCCCCCcccHHHHHHHHH
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGF 349 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~ 349 (399)
++||++++ ++++.|+++.++
T Consensus 216 ~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 216 KTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp EEEEEEEC---SEEHHHHHHTC-
T ss_pred CeEEEeCC---CcCHHHHHHHhc
Confidence 89999886 389999988764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=217.19 Aligned_cols=222 Identities=16% Similarity=0.144 Sum_probs=171.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+|+||||||||+||+++++.|+++| ++|+++.|+..+.. ..++++
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~~------------------------------~~~~~~ 47 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA---EILRLADLSPLDPA------------------------------GPNEEC 47 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE---EEEEEEESSCCCCC------------------------------CTTEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC---CEEEEEecCCcccc------------------------------CCCCEE
Confidence 346899999999999999999999999 66799999876542 257899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+.+|++ +.+.+..+++++|+|||+||.. ....++..+++|+.++.++++++++. +.++||++||.++|+..
T Consensus 48 ~~~Dl~-------d~~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~ 118 (267)
T 3rft_A 48 VQCDLA-------DANAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYY 118 (267)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTS
T ss_pred EEcCCC-------CHHHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCC
Confidence 999999 5666668888999999999984 44667889999999999999999886 78999999999999754
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KE 247 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~ 247 (399)
.. ...++|+. +..+.+.|+.||+.+|.+++.+ +.
T Consensus 119 ~~---~~~~~e~~-----------------------------------------~~~~~~~Y~~sK~~~e~~~~~~a~~~ 154 (267)
T 3rft_A 119 PQ---TERLGPDV-----------------------------------------PARPDGLYGVSKCFGENLARMYFDKF 154 (267)
T ss_dssp BT---TSCBCTTS-----------------------------------------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CC---CCCCCCCC-----------------------------------------CCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 32 11222221 1244578999999999999876 56
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
+++++++||+.|+|+.. ++...+++++++|+++++..++...... ..
T Consensus 155 g~~~~~vr~~~v~~~~~------------------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~---~~ 201 (267)
T 3rft_A 155 GQETALVRIGSCTPEPN------------------------------NYRMLSTWFSHDDFVSLIEAVFRAPVLG---CP 201 (267)
T ss_dssp CCCEEEEEECBCSSSCC------------------------------STTHHHHBCCHHHHHHHHHHHHHCSCCC---SC
T ss_pred CCeEEEEEeecccCCCC------------------------------CCCceeeEEcHHHHHHHHHHHHhCCCCC---ce
Confidence 89999999999998532 1234567899999999999988743221 35
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++++.++ ++.++.++... +.+|-
T Consensus 202 ~~~~~s~--~~~~~~~~~~~--~~~g~ 224 (267)
T 3rft_A 202 VVWGASA--NDAGWWDNSHL--GFLGW 224 (267)
T ss_dssp EEEECCC--CTTCCBCCGGG--GGGCC
T ss_pred EEEEeCC--CCCCcccChhH--HHCCC
Confidence 7788777 55666665332 44444
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-25 Score=210.13 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=169.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||++++++|++ | ++|++++|+.... .+ +.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r~~~~~--------------------------------~~---~~~ 41 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYNSSEIQ--------------------------------GG---YKL 41 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEESSSCCT--------------------------------TC---EEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecCCCcCC--------------------------------CC---cee
Confidence 5799999999999999999994 8 5568898876321 12 689
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. +. +||++||.++|+
T Consensus 42 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 42 DLTD-------FPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFD 112 (273)
T ss_dssp CTTS-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSC
T ss_pred ccCC-------HHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEc
Confidence 9994 444545555 49999999998654 3567888999999999999999985 55 899999999998
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
...+.+.|+ .+ ..+.+.|+.+|+.+|.+++.
T Consensus 113 ~~~~~~~e~-----~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~--- 143 (273)
T 2ggs_A 113 GEKGNYKEE-----DI-----------------------------------------PNPINYYGLSKLLGETFALQ--- 143 (273)
T ss_dssp SSSCSBCTT-----SC-----------------------------------------CCCSSHHHHHHHHHHHHHCC---
T ss_pred CCCCCcCCC-----CC-----------------------------------------CCCCCHHHHHHHHHHHHHhC---
Confidence 654333333 11 13457899999999999876
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
++++++||+.|||+. . ....++.....+....+.++ .+++++++|+|++++.++.... .+
T Consensus 144 -~~~~~iR~~~v~G~~-----~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-----~g 203 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRNK-----G------FPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-----TG 203 (273)
T ss_dssp -TTCEEEEECCCBSSS-----S------HHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-----CE
T ss_pred -CCeEEEecccccccc-----H------HHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-----CC
Confidence 678999999999821 1 11223334445544444343 7899999999999999997532 35
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+||+++ .++|+.|+++.+.+.+|.+.
T Consensus 204 ~~~i~~---~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 204 IIHVAG---ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp EEECCC---CCEEHHHHHHHHHHHTTCCS
T ss_pred eEEECC---CcccHHHHHHHHHHHhCCCh
Confidence 899988 45999999999999998764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-26 Score=208.48 Aligned_cols=208 Identities=15% Similarity=0.251 Sum_probs=161.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||++++++|+++| ++|++++|+...... ..+++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVPQ-----------------------------YNNVKAVHF 48 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSCC-----------------------------CTTEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCccchhh-----------------------------cCCceEEEe
Confidence 689999999999999999999999 667999998654311 157899999
Q ss_pred cCCCCCCCCCc-hhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 93 DISSEDLGLKD-SNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 93 Dl~~~~~~~~~-~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
|++ + .+.+.++++++|+|||+|+.... ..+++|+.++.++++++++. ++++||++||.++++...
T Consensus 49 D~~-------d~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~- 114 (219)
T 3dqp_A 49 DVD-------WTPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK- 114 (219)
T ss_dssp CTT-------SCHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG-
T ss_pred ccc-------CCHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc-
Confidence 999 5 56666778899999999998642 24678999999999999986 789999999987765321
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
+.| + . ..+.+.|+.+|+.+|++++. ..++++
T Consensus 115 ------~~e------~-~-----------------------------------~~~~~~Y~~sK~~~e~~~~~-~~~i~~ 145 (219)
T 3dqp_A 115 ------WIG------A-G-----------------------------------FDALKDYYIAKHFADLYLTK-ETNLDY 145 (219)
T ss_dssp ------CCS------H-H-----------------------------------HHHTHHHHHHHHHHHHHHHH-SCCCEE
T ss_pred ------ccc------c-c-----------------------------------cccccHHHHHHHHHHHHHHh-ccCCcE
Confidence 111 0 0 02246899999999999952 378999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEe
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni 331 (399)
+++||+.+||+... +.. . . +...+++++++|+|++++.++..... . +++||+
T Consensus 146 ~ilrp~~v~g~~~~---~~~-------------------~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~-~--g~~~~i 197 (219)
T 3dqp_A 146 TIIQPGALTEEEAT---GLI-------------------D-I--NDEVSASNTIGDVADTIKELVMTDHS-I--GKVISM 197 (219)
T ss_dssp EEEEECSEECSCCC---SEE-------------------E-E--SSSCCCCEEHHHHHHHHHHHHTCGGG-T--TEEEEE
T ss_pred EEEeCceEecCCCC---Ccc-------------------c-c--CCCcCCcccHHHHHHHHHHHHhCccc-c--CcEEEe
Confidence 99999999997541 100 0 1 24678999999999999999974332 1 689999
Q ss_pred cCCCCCcccHHHHHH
Q 015874 332 GSSLRNPVTLVSILD 346 (399)
Q Consensus 332 ~~~~~~~~s~~el~~ 346 (399)
+++ ..++.|+.+
T Consensus 198 ~~g---~~~~~e~~~ 209 (219)
T 3dqp_A 198 HNG---KTAIKEALE 209 (219)
T ss_dssp EEC---SEEHHHHHH
T ss_pred CCC---CccHHHHHH
Confidence 886 388998864
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=213.50 Aligned_cols=214 Identities=14% Similarity=0.145 Sum_probs=161.8
Q ss_pred EEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 14 TILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|||||||||++++++|+++ | ++|++++|+...... +. ..+++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~---~~------------------------~~~~~~~~ 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA---SQIVAIVRNPAKAQA---LA------------------------AQGITVRQ 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTCHH---HH------------------------HTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC---ceEEEEEcChHhhhh---hh------------------------cCCCeEEE
Confidence 4899999999999999999998 8 567999998654321 11 14688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|++ +.+.+..+++++|+|||+|+... ..|+.++.++++++++. ++++||++||.++|..
T Consensus 51 ~D~~-------d~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~--- 110 (286)
T 2zcu_A 51 ADYG-------DEAALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTS--- 110 (286)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTTC---
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC---
Confidence 9999 55666678889999999998521 24788999999999986 7899999999977520
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
+..|+.+|..+|++++. .++++
T Consensus 111 --------------------------------------------------------~~~y~~sK~~~e~~~~~--~~~~~ 132 (286)
T 2zcu_A 111 --------------------------------------------------------PLGLADEHIETEKMLAD--SGIVY 132 (286)
T ss_dssp --------------------------------------------------------CSTTHHHHHHHHHHHHH--HCSEE
T ss_pred --------------------------------------------------------cchhHHHHHHHHHHHHH--cCCCe
Confidence 24699999999999986 58999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhh-cCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
+++||+.++++.. .. +.... .+.. . .+.++..++++|++|+|++++.++.... .. +++||
T Consensus 133 ~ilrp~~~~~~~~----------~~----~~~~~~~~~~-~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~--g~~~~ 193 (286)
T 2zcu_A 133 TLLRNGWYSENYL----------AS----APAALEHGVF-I-GAAGDGKIASATRADYAAAAARVISEAG-HE--GKVYE 193 (286)
T ss_dssp EEEEECCBHHHHH----------TT----HHHHHHHTEE-E-ESCTTCCBCCBCHHHHHHHHHHHHHSSS-CT--TCEEE
T ss_pred EEEeChHHhhhhH----------HH----hHHhhcCCce-e-ccCCCCccccccHHHHHHHHHHHhcCCC-CC--CceEE
Confidence 9999987666321 11 11121 2222 2 3455678999999999999999997422 22 67999
Q ss_pred ecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 331 i~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++++ .++|+.|+++.+.+.+|.+.
T Consensus 194 i~~~--~~~s~~e~~~~i~~~~g~~~ 217 (286)
T 2zcu_A 194 LAGD--SAWTLTQLAAELTKQSGKQV 217 (286)
T ss_dssp ECCS--SCBCHHHHHHHHHHHHSSCC
T ss_pred EeCC--CcCCHHHHHHHHHHHHCCCC
Confidence 9998 67999999999999998754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=214.10 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=170.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++++++|+++| ++|++++|+..... ..+++++.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------------------------------~~~~~~~~~ 49 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDIVDLGAA------------------------------EAHEEIVAC 49 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE---EEEEECCSSCCCCC------------------------------CTTEEECCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCCCcccc------------------------------CCCccEEEc
Confidence 689999999999999999999999 66799988765320 135788999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|++ +.+.+..+++++|+|||+|+.. ....+...+++|+.++.++++++.+. ++++||++||.++|+....
T Consensus 50 Dl~-------d~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~- 119 (267)
T 3ay3_A 50 DLA-------DAQAVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR- 119 (267)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT-
T ss_pred cCC-------CHHHHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC-
Confidence 999 5555667788999999999976 34556788999999999999999985 7899999999999986432
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCCCc
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~~ 250 (399)
..+++|+.+ ..+.+.|+.+|+.+|.+++.+ ..+++
T Consensus 120 --~~~~~E~~~-----------------------------------------~~~~~~Y~~sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 120 --TTRIDTEVP-----------------------------------------RRPDSLYGLSKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp --TSCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --CCCCCCCCC-----------------------------------------CCCCChHHHHHHHHHHHHHHHHHHcCCC
Confidence 122222221 234578999999999999876 56899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
++++||+.+|+... ++...+++++++|+|++++.++..... . .++||
T Consensus 157 ~~~lrp~~v~~~~~------------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~-~--~~~~~ 203 (267)
T 3ay3_A 157 TLNIRIGSCFPKPK------------------------------DARMMATWLSVDDFMRLMKRAFVAPKL-G--CTVVY 203 (267)
T ss_dssp EEEEEECBCSSSCC------------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC-C--EEEEE
T ss_pred EEEEeceeecCCCC------------------------------CCCeeeccccHHHHHHHHHHHHhCCCC-C--ceeEe
Confidence 99999999984210 112356889999999999999974321 1 46899
Q ss_pred ecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 331 i~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.++ ...++.++.+. +.+|..+
T Consensus 204 ~~~~--~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 204 GASA--NTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp ECCS--CSSCCBCCGGG--GGGCCCC
T ss_pred cCCC--ccccccCHHHH--HHcCCCC
Confidence 9887 56788888776 6666544
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=217.71 Aligned_cols=234 Identities=15% Similarity=0.138 Sum_probs=169.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
|.+|+|+|||||||||++|++.|++.| +.|++++|+.... .....+. .+ ...+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~-~l--------------------~~~~v~ 63 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFK-AL--------------------EDKGAI 63 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHH-HH--------------------HHTTCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHH-HH--------------------HhCCcE
Confidence 456899999999999999999999999 5569999987332 1111111 11 126899
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
++.+|++ +.+.+..+++ ++|+|||+|+.. |+.++.++++++++...+++||+ | +|
T Consensus 64 ~~~~Dl~-------d~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~ 120 (346)
T 3i6i_A 64 IVYGLIN-------EQEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S---EF 120 (346)
T ss_dssp EEECCTT-------CHHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S---CC
T ss_pred EEEeecC-------CHHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c---cc
Confidence 9999999 5566667788 999999999972 77889999999999733899986 4 34
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
|.. ..|. . +..+.+.|+.+|+.+|+++++
T Consensus 121 g~~---~~e~-----~-----------------------------------------~~~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 121 GHD---VNRA-----D-----------------------------------------PVEPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp SSC---TTTC-----C-----------------------------------------CCTTHHHHHHHHHHHHHHHHH--
T ss_pred CCC---CCcc-----C-----------------------------------------cCCCcchHHHHHHHHHHHHHH--
Confidence 421 1111 1 113346799999999999988
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.++|.... .+... ......+....++++++..+++++++|+|++++.++...... +
T Consensus 150 ~g~~~tivrpg~~~g~~~~---~~~~~-------~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~---~ 216 (346)
T 3i6i_A 150 SGIPFTYICCNSIASWPYY---NNIHP-------SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTL---N 216 (346)
T ss_dssp TTCCBEEEECCEESSCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGT---T
T ss_pred cCCCEEEEEecccccccCc---ccccc-------ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcccc---C
Confidence 6899999999999996541 11110 111112334456688888999999999999999999743221 5
Q ss_pred cEEEecC-CCCCcccHHHHHHHHHHhhccCC
Q 015874 327 NIYHVGS-SLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 327 ~~yni~~-~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++|++.+ + +.+|+.|+++.+++.+|.+.
T Consensus 217 ~~~~i~g~~--~~~s~~e~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 217 KSVHFRPSC--NCLNINELASVWEKKIGRTL 245 (346)
T ss_dssp EEEECCCGG--GEECHHHHHHHHHHHHTSCC
T ss_pred eEEEEeCCC--CCCCHHHHHHHHHHHHCCCC
Confidence 7888874 4 67999999999999999764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=205.16 Aligned_cols=232 Identities=16% Similarity=0.143 Sum_probs=169.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+|+|+|||||||||++++++|+++ | ++|+++.|+.... +. ...++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g---~~V~~~~r~~~~~---~~-------------------------~~~~~ 50 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDK---FVAKGLVRSAQGK---EK-------------------------IGGEA 50 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTT---CEEEEEESCHHHH---HH-------------------------TTCCT
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCC---cEEEEEEcCCCch---hh-------------------------cCCCe
Confidence 45789999999999999999999999 6 5678898864221 10 02467
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------c----ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------D----ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~----~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.++.+|++ +.+.+.++++++|+|||+|+.... . +.....+++|+.++.++++++++.
T Consensus 51 ~~~~~D~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (253)
T 1xq6_A 51 DVFIGDIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 123 (253)
T ss_dssp TEEECCTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH
T ss_pred eEEEecCC-------CHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc
Confidence 88999999 556666788899999999996532 1 122346789999999999999986
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
++++||++||.+++..... . .+.. .+.|
T Consensus 124 -~~~~iv~~SS~~~~~~~~~------~--------------------------------------------~~~~-~~~y 151 (253)
T 1xq6_A 124 -GVKHIVVVGSMGGTNPDHP------L--------------------------------------------NKLG-NGNI 151 (253)
T ss_dssp -TCSEEEEEEETTTTCTTCG------G--------------------------------------------GGGG-GCCH
T ss_pred -CCCEEEEEcCccCCCCCCc------c--------------------------------------------cccc-chhH
Confidence 7889999999976432110 0 0000 1358
Q ss_pred hHhHHHHHHHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 232 VFTKTMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 232 ~~sK~~~E~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+|+.+|.+++. .+++++++||+.++|+.... ..+.. +....+.+ ...++++++|+|++
T Consensus 152 ~~sK~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~-~~~~~--------------~~~~~~~~---~~~~~~~~~Dva~~ 211 (253)
T 1xq6_A 152 LVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGV-RELLV--------------GKDDELLQ---TDTKTVPRADVAEV 211 (253)
T ss_dssp HHHHHHHHHHHHT--SSSCEEEEEECEEECSCSSS-SCEEE--------------ESTTGGGG---SSCCEEEHHHHHHH
T ss_pred HHHHHHHHHHHHh--CCCceEEEecceeecCCcch-hhhhc--------------cCCcCCcC---CCCcEEcHHHHHHH
Confidence 8899999999886 68999999999999986521 11110 11111222 13579999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCC-CcccHHHHHHHHHHhhcc
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~-~~~s~~el~~~l~~~~~~ 354 (399)
++.++..... . +++||++++.. .++|+.|+++.+++.+|+
T Consensus 212 ~~~~~~~~~~-~--g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 212 CIQALLFEEA-K--NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHTTCGGG-T--TEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHcCccc-c--CCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 9999874321 1 67999998631 459999999999998875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=205.92 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=161.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||+++++.|++. | ++|.+++|+..+.... ...+++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g---~~V~~~~R~~~~~~~~---------------------------~~~~v~~~~ 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI---DHFHIGVRNVEKVPDD---------------------------WRGKVSVRQ 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC---TTEEEEESSGGGSCGG---------------------------GBTTBEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC---CcEEEEECCHHHHHHh---------------------------hhCCCEEEE
Confidence 67999999999999999999987 8 4569999987543221 136899999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|++ +.+.+..+++++|+|||+|+..... ..|+.++.++++++++. ++++||++||.+....
T Consensus 51 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~--- 112 (289)
T 3e48_A 51 LDYF-------NQESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHN--- 112 (289)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTT---
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCC---
Confidence 9999 5666668889999999999875432 34788999999999996 7899999999542110
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
.+..+...+..+|..+.. .++++
T Consensus 113 -------------------------------------------------------~~~~~~~~~~~~e~~~~~--~g~~~ 135 (289)
T 3e48_A 113 -------------------------------------------------------NPFHMSPYFGYASRLLST--SGIDY 135 (289)
T ss_dssp -------------------------------------------------------CCSTTHHHHHHHHHHHHH--HCCEE
T ss_pred -------------------------------------------------------CCCccchhHHHHHHHHHH--cCCCE
Confidence 011122223345555554 58999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEe
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni 331 (399)
+++||+.++|+.. .++.....+.. ...+.++..+++++++|+|++++.++...... +++||+
T Consensus 136 ~ilrp~~~~~~~~--------------~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~---g~~~~~ 197 (289)
T 3e48_A 136 TYVRMAMYMDPLK--------------PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTW---GKRYLL 197 (289)
T ss_dssp EEEEECEESTTHH--------------HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT---TCEEEE
T ss_pred EEEeccccccccH--------------HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcC---CceEEe
Confidence 9999999998532 11222222222 23345678899999999999999999853322 579999
Q ss_pred cCCCCCcccHHHHHHHHHHhhccCC
Q 015874 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 332 ~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+ + ..+|+.|+++.+.+.+|++.
T Consensus 198 ~-~--~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 198 S-G--YSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp C-C--EEEEHHHHHHHHHHHHTSCC
T ss_pred C-C--CcCCHHHHHHHHHHHHCCce
Confidence 9 8 78999999999999999754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=198.73 Aligned_cols=214 Identities=12% Similarity=0.005 Sum_probs=149.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++++++|+++| ++|++++|+..+. ..+ ...+++++.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~---~~~------------------------~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDPQKA---ADR------------------------LGATVATLVK 50 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHH------------------------TCTTSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEeccccc---ccc------------------------cCCCceEEec
Confidence 689999999999999999999999 5679999975432 110 1257899999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|+++++ . ..+.++|+|||+|+...... ....|+.++.++++++++. + ++||++||++++....+.
T Consensus 51 D~~d~~-------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 51 EPLVLT-------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD 115 (224)
T ss_dssp CGGGCC-------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS
T ss_pred cccccc-------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC
Confidence 999643 2 55689999999999862222 1467999999999999986 6 999999998655533210
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-hCCCcE
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSL 251 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~~~~~ 251 (399)
. ....++. ....+.+.|+.+|+.+|.+.... ..++++
T Consensus 116 ~-~~~~~~~-----------------------------------------~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~ 153 (224)
T 3h2s_A 116 H-PMILDFP-----------------------------------------ESAASQPWYDGALYQYYEYQFLQMNANVNW 153 (224)
T ss_dssp S-CGGGGCC-----------------------------------------GGGGGSTTHHHHHHHHHHHHHHTTCTTSCE
T ss_pred c-cccccCC-----------------------------------------CCCccchhhHHHHHHHHHHHHHHhcCCCcE
Confidence 0 0000000 00022467999999999653332 568999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEe
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni 331 (399)
+++||+.+||+.. ..++.. +.. .+.. +...+++++++|+|++++.++.... .. +++|++
T Consensus 154 ~ivrp~~v~g~~~--~~~~~~--------------~~~-~~~~-~~~~~~~i~~~DvA~~~~~~l~~~~-~~--g~~~~~ 212 (224)
T 3h2s_A 154 IGISPSEAFPSGP--ATSYVA--------------GKD-TLLV-GEDGQSHITTGNMALAILDQLEHPT-AI--RDRIVV 212 (224)
T ss_dssp EEEEECSBCCCCC--CCCEEE--------------ESS-BCCC-CTTSCCBCCHHHHHHHHHHHHHSCC-CT--TSEEEE
T ss_pred EEEcCccccCCCc--ccCcee--------------ccc-cccc-CCCCCceEeHHHHHHHHHHHhcCcc-cc--CCEEEE
Confidence 9999999999843 122111 011 1111 2345789999999999999998432 22 689999
Q ss_pred cCC
Q 015874 332 GSS 334 (399)
Q Consensus 332 ~~~ 334 (399)
++.
T Consensus 213 ~~~ 215 (224)
T 3h2s_A 213 RDA 215 (224)
T ss_dssp EEC
T ss_pred ecC
Confidence 987
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=205.56 Aligned_cols=232 Identities=13% Similarity=0.032 Sum_probs=170.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||||+||++++++|+++|. ++|.+++|+...... ..+. ..+++++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~R~~~~~~~-~~l~------------------------~~~~~~~~ 57 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT--FKVRVVTRNPRKKAA-KELR------------------------LQGAEVVQ 57 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS--SEEEEEESCTTSHHH-HHHH------------------------HTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC--ceEEEEEcCCCCHHH-HHHH------------------------HCCCEEEE
Confidence 57999999999999999999999882 356899998754311 1111 15788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|++ +.+.+...++++|+|||+|+..... ..+.|+.++.++++++++. ++++||++|+.++++...+
T Consensus 58 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~ 124 (299)
T 2wm3_A 58 GDQD-------DQVIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAG 124 (299)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTT
T ss_pred ecCC-------CHHHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCC
Confidence 9999 5566667888999999999853211 1346788999999999986 8899999888877653210
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
.+...|+.+|..+|++++. .++++
T Consensus 125 ------------------------------------------------------~~~~~y~~sK~~~e~~~~~--~gi~~ 148 (299)
T 2wm3_A 125 ------------------------------------------------------RLAAAHFDGKGEVEEYFRD--IGVPM 148 (299)
T ss_dssp ------------------------------------------------------SCCCHHHHHHHHHHHHHHH--HTCCE
T ss_pred ------------------------------------------------------cccCchhhHHHHHHHHHHH--CCCCE
Confidence 2246799999999999987 58999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc-ccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
+++||+.+||+... .+.... ...|.. ......++..+++++++|+|+++..++....... +++|+
T Consensus 149 ~ilrp~~~~~~~~~---~~~~~~---------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~--g~~~~ 214 (299)
T 2wm3_A 149 TSVRLPCYFENLLS---HFLPQK---------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYV--GQNIG 214 (299)
T ss_dssp EEEECCEEGGGGGT---TTCCEE---------CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHT--TCEEE
T ss_pred EEEeecHHhhhchh---hcCCcc---------cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhC--CeEEE
Confidence 99999999996431 111100 012211 1112235678899999999999999987422112 57899
Q ss_pred ecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 331 i~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++ ..+|+.|+++.+.+.+|++.
T Consensus 215 ~~g---~~~s~~e~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 215 LST---CRHTAEEYAALLTKHTRKVV 237 (299)
T ss_dssp CCS---EEECHHHHHHHHHHHHSSCE
T ss_pred eee---ccCCHHHHHHHHHHHHCCCc
Confidence 986 45999999999999999754
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=196.27 Aligned_cols=218 Identities=14% Similarity=0.071 Sum_probs=138.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|||||||||+++++.|+++| ++|++++|+..+.... ..+++++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~----------------------------~~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVRNAGKITQT----------------------------HKDINILQK 49 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCSHHHHHH----------------------------CSSSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEcCchhhhhc----------------------------cCCCeEEec
Confidence 689999999999999999999999 6679999986432110 157889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~~ 172 (399)
|+++++ . +.+.++|+|||+|+.... ..+.|+.++.++++++++. +++++|++||.+++....+.
T Consensus 50 D~~d~~-------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 113 (221)
T 3ew7_A 50 DIFDLT-------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG 113 (221)
T ss_dssp CGGGCC-------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------
T ss_pred cccChh-------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC
Confidence 999642 2 556889999999998432 1456899999999999986 78999999998766533210
Q ss_pred cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--hCCCc
Q 015874 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--KENLS 250 (399)
Q Consensus 173 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~~~~~ 250 (399)
....++ .+..+.+.|+.+|..+|.+..-. ..+++
T Consensus 114 ---~~~~~~-----------------------------------------~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 114 ---NTLLES-----------------------------------------KGLREAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp -------------------------------------------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred ---cccccc-----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 000000 01123456999999999873222 46899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
++++||+.+||+.. ..+. +. ..+....+.+++ .++++++|+|++++.++.... .. ++.||
T Consensus 150 ~~ivrp~~v~g~~~--~~~~---------~~---~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~-~~--g~~~~ 209 (221)
T 3ew7_A 150 WTYISPSAMFEPGE--RTGD---------YQ---IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPN-HL--NEHFT 209 (221)
T ss_dssp EEEEECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSCS-CT--TSEEE
T ss_pred EEEEeCcceecCCC--ccCc---------eE---eccccceecCCC---CceEeHHHHHHHHHHHHhCcc-cc--CCEEE
Confidence 99999999999833 1110 00 011111222322 368999999999999998433 22 68999
Q ss_pred ecCCCCCcccHHH
Q 015874 331 VGSSLRNPVTLVS 343 (399)
Q Consensus 331 i~~~~~~~~s~~e 343 (399)
++++ .+.+..|
T Consensus 210 ~~~~--~~~~~~~ 220 (221)
T 3ew7_A 210 VAGK--LEHHHHH 220 (221)
T ss_dssp CCC----------
T ss_pred ECCC--Ccccccc
Confidence 9998 5555443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-24 Score=196.45 Aligned_cols=200 Identities=18% Similarity=0.130 Sum_probs=150.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||||+||++++++|+++|+. .+|++++|+....... ...++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------------~~~~~~~ 67 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------------AYKNVNQ 67 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------------ccCCceE
Confidence 67899999999999999999999999941 1679999987543211 0146788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+.+|+++ .+.+..+++++|+|||+||.......++..+++|+.++.++++++++. +.++||++||.++|+..
T Consensus 68 ~~~D~~d-------~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~ 139 (242)
T 2bka_A 68 EVVDFEK-------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS 139 (242)
T ss_dssp EECCGGG-------GGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC
T ss_pred EecCcCC-------HHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC
Confidence 9999994 444446677999999999976544556778999999999999999885 78899999999887621
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
.+.|+.+|+..|.+++. .++
T Consensus 140 ----------------------------------------------------------~~~Y~~sK~~~e~~~~~--~~~ 159 (242)
T 2bka_A 140 ----------------------------------------------------------NFLYLQVKGEVEAKVEE--LKF 159 (242)
T ss_dssp ----------------------------------------------------------SSHHHHHHHHHHHHHHT--TCC
T ss_pred ----------------------------------------------------------cchHHHHHHHHHHHHHh--cCC
Confidence 35799999999999987 467
Q ss_pred -cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 250 -SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 250 -~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
+++++|||.|+|+...+ .....+...... ..+...+ ...+++++|+|++++.++..
T Consensus 160 ~~~~~vrpg~v~~~~~~~--------~~~~~~~~~~~~-~~~~~~~----~~~~~~~~dva~~~~~~~~~ 216 (242)
T 2bka_A 160 DRYSVFRPGVLLCDRQES--------RPGEWLVRKFFG-SLPDSWA----SGHSVPVVTVVRAMLNNVVR 216 (242)
T ss_dssp SEEEEEECCEEECTTGGG--------SHHHHHHHHHHC-SCCTTGG----GGTEEEHHHHHHHHHHHHTS
T ss_pred CCeEEEcCceecCCCCCC--------cHHHHHHHHhhc-ccCcccc----CCcccCHHHHHHHHHHHHhC
Confidence 69999999999986521 011112222222 2221111 23589999999999999973
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-25 Score=200.25 Aligned_cols=201 Identities=16% Similarity=0.095 Sum_probs=152.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||||+||++++++|+++|+. ++|++++|+.... ..+++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~-~~V~~~~r~~~~~-------------------------------~~~~~~~ 51 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------------HPRLDNP 51 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------------CTTEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCC-CeEEEEeCCCccc-------------------------------CCCceEE
Confidence 3689999999999999999999999941 2678888876531 2467888
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
.+|+++ .+.+.+.+ +|+|||+|+.... ...++..+++|+.++.++++++++. ++++||++||.++|+.
T Consensus 52 ~~D~~~-------~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~- 120 (215)
T 2a35_A 52 VGPLAE-------LLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK- 120 (215)
T ss_dssp BSCHHH-------HGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eccccC-------HHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-
Confidence 999984 33332333 9999999997643 3567788999999999999999986 7889999999988763
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
+.+.|+.+|+.+|++++. .++
T Consensus 121 ---------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~ 141 (215)
T 2a35_A 121 ---------------------------------------------------------SSIFYNRVKGELEQALQE--QGW 141 (215)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCC
T ss_pred ---------------------------------------------------------CccHHHHHHHHHHHHHHH--cCC
Confidence 135799999999999987 589
Q ss_pred c-EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcE
Q 015874 250 S-LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 250 ~-~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
+ ++++||+.+||+...+ .+... .. +....+ .+ ..++++|++|+|++++.++.... +++
T Consensus 142 ~~~~~vrp~~v~g~~~~~--~~~~~----------~~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~-----~~~ 200 (215)
T 2a35_A 142 PQLTIARPSLLFGPREEF--RLAEI----------LA-APIARI-LP--GKYHGIEACDLARALWRLALEEG-----KGV 200 (215)
T ss_dssp SEEEEEECCSEESTTSCE--EGGGG----------TT-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC-----SEE
T ss_pred CeEEEEeCceeeCCCCcc--hHHHH----------HH-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC-----CCc
Confidence 9 9999999999987631 11111 11 111111 22 26799999999999999997322 579
Q ss_pred EEecCC
Q 015874 329 YHVGSS 334 (399)
Q Consensus 329 yni~~~ 334 (399)
||++++
T Consensus 201 ~~i~~~ 206 (215)
T 2a35_A 201 RFVESD 206 (215)
T ss_dssp EEEEHH
T ss_pred eEEcHH
Confidence 999886
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=203.79 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=165.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+|||||||||+++++.|+++| ++|++++|+..... .+.+.+ ..+++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~-~~~l~~-----------------------~~~v~~v 56 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGLI-AEELQA-----------------------IPNVTLF 56 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSHH-HHHHHT-----------------------STTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCChhh-HHHHhh-----------------------cCCcEEE
Confidence 46899999999999999999999999 45689999876431 111110 1368899
Q ss_pred ecc-CCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecce--ee
Q 015874 91 PGD-ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAY--VA 166 (399)
Q Consensus 91 ~gD-l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~--v~ 166 (399)
.+| ++ +.+.+..+++++|+|||+++.... ..|..+ .++++++++. + +++|||+||.+ .|
T Consensus 57 ~~D~l~-------d~~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~ 119 (352)
T 1xgk_A 57 QGPLLN-------NVPLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLY 119 (352)
T ss_dssp ESCCTT-------CHHHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGT
T ss_pred ECCccC-------CHHHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCcccccc
Confidence 999 98 555566778899999999875321 236666 9999999986 6 89999999985 22
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
+. .+++.|+.+|+.+|++++.
T Consensus 120 ~~---------------------------------------------------------~~~~~y~~sK~~~E~~~~~-- 140 (352)
T 1xgk_A 120 GP---------------------------------------------------------WPAVPMWAPKFTVENYVRQ-- 140 (352)
T ss_dssp SS---------------------------------------------------------CCCCTTTHHHHHHHHHHHT--
T ss_pred CC---------------------------------------------------------CCCccHHHHHHHHHHHHHH--
Confidence 21 1236799999999999987
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeH-HHHHHHHHHHHHhccC-CC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPV-DMVVNAMIVAMVAHAK-QP 323 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v-~Dva~~i~~~~~~~~~-~~ 323 (399)
.+++++++||+ +||+..... +...+. ......|... .+++++++.++++|+ +|+|++++.++..... ..
T Consensus 141 ~gi~~~ivrpg-~~g~~~~~~--~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~ 212 (352)
T 1xgk_A 141 LGLPSTFVYAG-IYNNNFTSL--PYPLFQ-----MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN 212 (352)
T ss_dssp SSSCEEEEEEC-EEGGGCBSS--SCSSCB-----EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHT
T ss_pred cCCCEEEEecc-eecCCchhc--cccccc-----ccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhC
Confidence 48999999976 688654211 000000 0001122321 235556788999999 9999999999975321 11
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||+++ ..+|+.|+++.+++.+|++.
T Consensus 213 --g~~~~l~~---~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 213 --GHRIALTF---ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp --TCEEEECS---EEECHHHHHHHHHHHHTSCE
T ss_pred --CeEEEEec---CCCCHHHHHHHHHHHHCCCC
Confidence 57999995 45999999999999999764
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=183.36 Aligned_cols=203 Identities=13% Similarity=0.097 Sum_probs=149.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||||+||++++++|+++| ++|++++|+...... ....+++++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~---------------------------~~~~~~~~~ 51 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPS---------------------------EGPRPAHVV 51 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSCS---------------------------SSCCCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeChhhccc---------------------------ccCCceEEE
Confidence 34899999999999999999999999 567999997643211 013578899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|++ +.+.+..+++++|+|||+|+...... + .++|+.++.++++++++. ++++||++||.++|+...
T Consensus 52 ~~D~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~-~---~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 52 VGDVL-------QAADVDKTVAGQDAVIVLLGTRNDLS-P---TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp ESCTT-------SHHHHHHHHTTCSEEEECCCCTTCCS-C---CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECccCCCCCC-c---cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcc
Confidence 99999 55556677889999999999764421 1 247899999999999986 789999999999887532
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
.. + .+.+.|+.+|..+|++++. .+++
T Consensus 120 ~~----------~------------------------------------------~~~~~y~~~K~~~e~~~~~--~~i~ 145 (206)
T 1hdo_A 120 KV----------P------------------------------------------PRLQAVTDDHIRMHKVLRE--SGLK 145 (206)
T ss_dssp CS----------C------------------------------------------GGGHHHHHHHHHHHHHHHH--TCSE
T ss_pred cc----------c------------------------------------------ccchhHHHHHHHHHHHHHh--CCCC
Confidence 10 0 0235799999999999976 6899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
++++||+.++. .. ..+.... .+.+.+. .++++++|+|++++.++... .. .+++|+
T Consensus 146 ~~~lrp~~~~~-~~--~~~~~~~-----------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~-~~--~g~~~~ 200 (206)
T 1hdo_A 146 YVAVMPPHIGD-QP--LTGAYTV-----------------TLDGRGP--SRVISKHDLGHFMLRCLTTD-EY--DGHSTY 200 (206)
T ss_dssp EEEECCSEEEC-CC--CCSCCEE-----------------ESSSCSS--CSEEEHHHHHHHHHHTTSCS-TT--TTCEEE
T ss_pred EEEEeCCcccC-CC--CCcceEe-----------------cccCCCC--CCccCHHHHHHHHHHHhcCc-cc--ccccee
Confidence 99999999832 22 1111000 0011111 48999999999999998742 22 268999
Q ss_pred ecCC
Q 015874 331 VGSS 334 (399)
Q Consensus 331 i~~~ 334 (399)
++++
T Consensus 201 i~~g 204 (206)
T 1hdo_A 201 PSHQ 204 (206)
T ss_dssp EECC
T ss_pred eecc
Confidence 9886
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=194.88 Aligned_cols=239 Identities=12% Similarity=0.159 Sum_probs=165.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+|+|+|||||||||+++++.|+++| +.|++++|+.... ...+.+.. + ...++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~-~--------------------~~~~~~~ 59 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNIDKVQMLLY-F--------------------KQLGAKL 59 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHHHHHHHHH-H--------------------HTTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECCCcccchhHHHHHHH-H--------------------HhCCeEE
Confidence 5789999999999999999999999 4568999986532 11111110 0 0257899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecceeecC
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVAGE 168 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~v~~~ 168 (399)
+.+|++ +.+.+..+++++|+|||+|+..... .|+.++.++++++++. + +++||+ | +||.
T Consensus 60 ~~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~-g~v~~~v~-S---~~g~ 119 (313)
T 1qyd_A 60 IEASLD-------DHQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLP-S---EFGM 119 (313)
T ss_dssp ECCCSS-------CHHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEEC-S---CCSS
T ss_pred EeCCCC-------CHHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhc-CCCceEEe-c---CCcC
Confidence 999999 5556667888999999999975432 2677889999999986 6 899985 3 3443
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCC
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKEN 248 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~ 248 (399)
..... +. +. .+....| .+|..+|+++++ .+
T Consensus 120 ~~~~~-~~------~~----------------------------------------~p~~~~y-~sK~~~e~~~~~--~g 149 (313)
T 1qyd_A 120 DPDIM-EH------AL----------------------------------------QPGSITF-IDKRKVRRAIEA--AS 149 (313)
T ss_dssp CTTSC-CC------CC----------------------------------------SSTTHHH-HHHHHHHHHHHH--TT
T ss_pred Ccccc-cc------CC----------------------------------------CCCcchH-HHHHHHHHHHHh--cC
Confidence 21100 00 00 0112468 999999999986 68
Q ss_pred CcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcE
Q 015874 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 249 ~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
++++++||+.++|.....+..... .....+....++++++..+++++++|+|++++.++..... . ++.
T Consensus 150 ~~~~ilrp~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-~--~~~ 217 (313)
T 1qyd_A 150 IPYTYVSSNMFAGYFAGSLAQLDG---------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-L--NKT 217 (313)
T ss_dssp CCBCEEECCEEHHHHTTTSSCTTC---------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG-S--SSE
T ss_pred CCeEEEEeceeccccccccccccc---------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc-C--Cce
Confidence 999999999998854311111000 0001122334456777889999999999999999874321 1 467
Q ss_pred EEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 329 YHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 329 yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
|+++++. +.+|+.|+++.+.+.+|++..
T Consensus 218 ~~~~g~~-~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 218 MYIRPPM-NILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp EECCCGG-GEEEHHHHHHHHHHHHTCCCE
T ss_pred EEEeCCC-CccCHHHHHHHHHHhcCCCCc
Confidence 7776531 569999999999999997643
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=189.53 Aligned_cols=248 Identities=15% Similarity=0.142 Sum_probs=168.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+.... +...+++ +. ..++.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~-------------~~------~~~~~ 67 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDHG---QKVCNNI-------------GS------PDVIS 67 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH-------------CC------TTTEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCChhHH---HHHHHHh-------------CC------CCceE
Confidence 4678999999999999999999999999 5568887764321 1111111 10 13788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 68 ~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 147 (278)
T 2bgk_A 68 FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS 147 (278)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCe
Confidence 99999996432111111111122379999999997532 1457788999999999999988763 25679
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+.... .....|+.+|+
T Consensus 148 iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~ 172 (278)
T 2bgk_A 148 IVFTASISSFTAGE-------------------------------------------------------GVSHVYTATKH 172 (278)
T ss_dssp EEEECCGGGTCCCT-------------------------------------------------------TSCHHHHHHHH
T ss_pred EEEEeeccccCCCC-------------------------------------------------------CCCcchHHHHH
Confidence 99999998765321 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..|.+++.+ ..+++++++|||.|+++....... .. ........... +.....+++++|+|++
T Consensus 173 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~---~~~~~~~~~~~-------~~~~~~~~~~~dva~~ 239 (278)
T 2bgk_A 173 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG---VD---SSRVEELAHQA-------ANLKGTLLRAEDVADA 239 (278)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS---CC---HHHHHHHHHHT-------CSSCSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc---cc---hhHHHHhhhcc-------cccccccCCHHHHHHH
Confidence 999998876 358999999999999986532111 00 11111111100 1123468999999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhh
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~ 352 (399)
++.++...... -.+..|++.++ ..+++.|+++.+.+.+
T Consensus 240 ~~~l~~~~~~~-~~G~~~~v~gg--~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 240 VAYLAGDESKY-VSGLNLVIDGG--YTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHSGGGTT-CCSCEEEESTT--GGGCCTHHHHHSCSCC
T ss_pred HHHHcCccccc-CCCCEEEECCc--ccccCCccchhhhhhc
Confidence 99988643221 22789999998 6799999998876643
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=193.04 Aligned_cols=232 Identities=14% Similarity=0.140 Sum_probs=159.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-Ccc---cHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DID---SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+|+|+||||||+||+++++.|+++|+ .|++++|+. ... ...+.+. .+ ...++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~~-~l--------------------~~~~v 57 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN---PTYALVRKTITAANPETKEELID-NY--------------------QSLGV 57 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC---CEEEEECCSCCSSCHHHHHHHHH-HH--------------------HHTTC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC---cEEEEECCCcccCChHHHHHHHH-HH--------------------HhCCC
Confidence 57899999999999999999999994 568999986 211 1111111 00 02578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecceee
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVA 166 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~v~ 166 (399)
+++.+|++ +.+.+..+++++|+|||+|+... +.++.++++++++. + +++||+ | +|
T Consensus 58 ~~v~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S---~~ 113 (307)
T 2gas_A 58 ILLEGDIN-------DHETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEA-GNVKKFFP-S---EF 113 (307)
T ss_dssp EEEECCTT-------CHHHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHH-CCCSEEEC-S---CC
T ss_pred EEEEeCCC-------CHHHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhc-CCceEEee-c---cc
Confidence 89999999 55666688889999999999743 34577899999886 5 899983 3 34
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
|... .+. .+.. +..+.| .+|..+|.+++.
T Consensus 114 g~~~---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~-- 142 (307)
T 2gas_A 114 GLDV---DRH-----DAVE----------------------------------------PVRQVF-EEKASIRRVIEA-- 142 (307)
T ss_dssp SSCT---TSC-----CCCT----------------------------------------THHHHH-HHHHHHHHHHHH--
T ss_pred ccCc---ccc-----cCCC----------------------------------------cchhHH-HHHHHHHHHHHH--
Confidence 4211 110 0000 002468 999999999886
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+++++++||+.+++.... .+... ......+....++++++..+++++++|+|++++.++..... . +
T Consensus 143 ~~i~~~~lrp~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~--~ 209 (307)
T 2gas_A 143 EGVPYTYLCCHAFTGYFLR---NLAQL-------DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT-L--N 209 (307)
T ss_dssp HTCCBEEEECCEETTTTGG---GTTCT-------TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG-T--T
T ss_pred cCCCeEEEEcceeeccccc---ccccc-------ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc-c--C
Confidence 5899999999998885431 11110 00001122234456677889999999999999999974321 1 4
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.|++.++. +.+|+.|+++.+.+.+|++.
T Consensus 210 ~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 210 KAVHIRLPK-NYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp EEEECCCGG-GEEEHHHHHHHHHHHHTSCC
T ss_pred ceEEEeCCC-CcCCHHHHHHHHHHHhCCCC
Confidence 677776431 56999999999999999754
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=187.39 Aligned_cols=236 Identities=12% Similarity=0.047 Sum_probs=154.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+||||++++++|+++| ++|+++.|+..... . .+.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG---HTVIGIDRGQADIE-------------------------------A---DLST 44 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCChhHcc-------------------------------c---cccC
Confidence 589999999999999999999999 56789998765320 0 1567
Q ss_pred cCCCCCCCCCchhhHHHHh----cCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEeccee
Q 015874 93 DISSEDLGLKDSNLKEELW----NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~----~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS~~v 165 (399)
|++ +.+.+..++ .++|+|||+||.......++..+++|+.++.++++++.+. .+.++||++||..+
T Consensus 45 D~~-------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 45 PGG-------RETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp HHH-------HHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred Ccc-------cHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 877 344444444 3899999999987645678889999999999999988763 24589999999998
Q ss_pred ecCcCC--ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 166 AGERTG--LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 166 ~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
|+.... ...|.... .+.+.. ....+ ....+.+.|+.+|++.|.+++
T Consensus 118 ~~~~~~~~~~~~~~~~----~~~~~~---------------------~~~~~-------~~~~~~~~Y~~sK~a~~~~~~ 165 (255)
T 2dkn_A 118 TQPGAAELPMVEAMLA----GDEARA---------------------IELAE-------QQGQTHLAYAGSKYAVTCLAR 165 (255)
T ss_dssp GSTTGGGCHHHHHHHH----TCHHHH---------------------HHHHH-------HHCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhcc----cchhhh---------------------hhhcc-------ccCCcchhHHHHHHHHHHHHH
Confidence 874321 00000000 000000 00000 001223579999999999998
Q ss_pred Hh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 244 QS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 244 ~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
.+ ..+++++++|||.|+|+.... ++.....+....... + ...++++++|+|++++.++..
T Consensus 166 ~~~~~~~~~gi~v~~v~pg~v~~~~~~~-------------~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~ 230 (255)
T 2dkn_A 166 RNVVDWAGRGVRLNVVAPGAVETPLLQA-------------SKADPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGP 230 (255)
T ss_dssp HTHHHHHHTTCEEEEEEECCBCSHHHHH-------------HHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHhhcCcEEEEEcCCcccchhhhh-------------cccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCC
Confidence 76 258999999999999854310 000000000000001 1 345799999999999999974
Q ss_pred ccCCCCCCcEEEecCCCCCcccHH
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLV 342 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~ 342 (399)
..... .++.|+++++ ..+++.
T Consensus 231 ~~~~~-~G~~~~v~gg--~~~~~~ 251 (255)
T 2dkn_A 231 QASFI-HGSVLFVDGG--MDALMR 251 (255)
T ss_dssp GGTTC-CSCEEEESTT--HHHHHC
T ss_pred Ccccc-eeeEEEecCC--eEeeee
Confidence 32211 2689999997 445443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=192.84 Aligned_cols=228 Identities=13% Similarity=0.152 Sum_probs=160.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-Ccc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+|+|+||||||+||+++++.|+++| +.|++++|+. ... ...+.+.. + ...+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~~-~--------------------~~~~v~ 59 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLREE-F--------------------RSMGVT 59 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHHH-H--------------------HHTTCE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHHH-h--------------------hcCCcE
Confidence 5789999999999999999999999 4568999986 321 11111110 0 025789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecceeec
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVAG 167 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~v~~ 167 (399)
++.+|++ +.+.+..+++++|+|||+|+... +.++.++++++++. + +++||+ | +||
T Consensus 60 ~v~~D~~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S---~~g 115 (321)
T 3c1o_A 60 IIEGEME-------EHEKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP-S---DFG 115 (321)
T ss_dssp EEECCTT-------CHHHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC-S---CCS
T ss_pred EEEecCC-------CHHHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec-c---ccc
Confidence 9999999 55666688899999999998642 45678899999986 6 899983 3 344
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
... .|. .+.. ...+.| .+|..+|++++. .
T Consensus 116 ~~~---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~ 144 (321)
T 3c1o_A 116 CEE---DRI-----KPLP----------------------------------------PFESVL-EKKRIIRRAIEA--A 144 (321)
T ss_dssp SCG---GGC-----CCCH----------------------------------------HHHHHH-HHHHHHHHHHHH--H
T ss_pred cCc---ccc-----ccCC----------------------------------------CcchHH-HHHHHHHHHHHH--c
Confidence 211 111 0000 002468 999999999986 5
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHH---HhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV---ASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
+++++++||+.+++... ..+.. ....+....++++++..+++++++|+|+++..++..... .
T Consensus 145 ~~~~~~lrp~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~- 209 (321)
T 3c1o_A 145 ALPYTYVSANCFGAYFV-------------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC-C- 209 (321)
T ss_dssp TCCBEEEECCEEHHHHH-------------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG-T-
T ss_pred CCCeEEEEeceeccccc-------------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc-c-
Confidence 89999999998887421 01110 011222334456677889999999999999999974322 1
Q ss_pred CCcEEEecC-CCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGS-SLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~-~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
++.|++.+ + +.+|+.|+++.+.+.+|++.
T Consensus 210 -g~~~~~~g~~--~~~t~~e~~~~~~~~~g~~~ 239 (321)
T 3c1o_A 210 -NRIVIYRPPK--NIISQNELISLWEAKSGLSF 239 (321)
T ss_dssp -TEEEECCCGG--GEEEHHHHHHHHHHHHTSCC
T ss_pred -CeEEEEeCCC--CcccHHHHHHHHHHHcCCcc
Confidence 56788764 4 56999999999999999764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=186.34 Aligned_cols=249 Identities=13% Similarity=0.044 Sum_probs=161.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+||||||+|+||++++++|+++| ++|.+..|+.+.... ..++ .+.++.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~---~~~~---------------------~~~~~~~ 55 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAG---DTVIGTARRTEALDD---LVAA---------------------YPDRAEA 55 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGHH---HHHH---------------------CTTTEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHH---HHHh---------------------ccCCceE
Confidence 467999999999999999999999999 567888887654322 1111 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++.+.+. .+..+||+
T Consensus 56 ~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~ 135 (281)
T 3m1a_A 56 ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVN 135 (281)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996432111111111222379999999997532 2567778999999966666655331 26789999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .+.+.|+.||.+.|
T Consensus 136 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 159 (281)
T 3m1a_A 136 ISSFGGQLSF--------------------------------------------------------AGFSAYSATKAALE 159 (281)
T ss_dssp ECCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EcCccccCCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 9998654321 22467999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCc-ccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+++.+ ..++++++++||.|.++...+.... ...... +......... .. .......+.+++|+|++++
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~--~~~~~~~~~~~~dva~a~~ 233 (281)
T 3m1a_A 160 QLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPA---YAEKVGPTRQ-LV--QGSDGSQPGDPAKAAAAIR 233 (281)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTT---THHHHHHHHH-HH--HC-----CBCHHHHHHHHH
T ss_pred HHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchh---hHHHhHHHHH-HH--hhccCCCCCCHHHHHHHHH
Confidence 999876 3689999999999988764332111 111111 1111110000 11 1123456788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhc
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~ 353 (399)
.++..... +..|+++++ ....+.+....+.+.++
T Consensus 234 ~~~~~~~~----~~~~~l~s~--~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 234 LALDTEKT----PLRLALGGD--AVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHSSSC----CSEEEESHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC----CeEEecCch--HHHHHHHHHHHHHHHHH
Confidence 99974322 468999987 55667777777766654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=183.34 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=156.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .. .+.++.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 63 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAA---NHVVDEI---------QQ---------LGGQAF 63 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHH---------HH---------hCCceE
Confidence 3788999999999999999999999999 5678888875322 2222111 00 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
++.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 64 ~~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 136 (255)
T 1fmc_A 64 ACRCDITSE-------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN 136 (255)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999953 3333333 389999999997542 2456788999999999999988642 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .+...|+
T Consensus 137 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (255)
T 1fmc_A 137 GGGVILTITSMAAENKN--------------------------------------------------------INMTSYA 160 (255)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcccH
Confidence 56899999998765521 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|.+.|.+++.+ ..+++++++|||.|+++.... ... ..+......+ .....+++++|
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~---~~~-----~~~~~~~~~~---------~~~~~~~~~~d 223 (255)
T 1fmc_A 161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VIT-----PEIEQKMLQH---------TPIRRLGQPQD 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCC-----HHHHHHHHHT---------CSSCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh---ccC-----hHHHHHHHhc---------CCcccCCCHHH
Confidence 9999999998876 348999999999999864311 000 1112222221 11245789999
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCCCCCccc
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT 340 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s 340 (399)
+|++++.++...... -.+++|+++++ ...|
T Consensus 224 va~~~~~l~~~~~~~-~~G~~~~v~gg--~~~s 253 (255)
T 1fmc_A 224 IANAALFLCSPAASW-VSGQILTVSGG--GVQE 253 (255)
T ss_dssp HHHHHHHHHSGGGTT-CCSCEEEESTT--SCCC
T ss_pred HHHHHHHHhCCcccc-CCCcEEEECCc--eecc
Confidence 999999988643221 12679999998 4454
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=187.25 Aligned_cols=235 Identities=21% Similarity=0.235 Sum_probs=157.8
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|+..+++|+||||||+|+||++++++|+++| ++|.+..|+.+.. +...+++ ..
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~ 54 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREG---ATVAIADIDIERA---RQAAAEI---------------------GP 54 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------CT
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CC
Confidence 4556889999999999999999999999999 5568888764322 2222111 35
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-C
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-L 154 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~ 154 (399)
++.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ++ .
T Consensus 55 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~ 134 (259)
T 4e6p_A 55 AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRG 134 (259)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred CceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 67899999996432111111111223379999999997532 2567888999999999999988653 12 4
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 135 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 158 (259)
T 4e6p_A 135 GKIINMASQAGRRGE--------------------------------------------------------ALVAIYCAT 158 (259)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred eEEEEECChhhccCC--------------------------------------------------------CCChHHHHH
Confidence 689999998655421 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh---cCccccccCCCccccCeeeHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA---QGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~v~ 306 (399)
|...+.+.+.+ ..++++++++||.|+++.... ...++.... .+.......+......+.+.+
T Consensus 159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 228 (259)
T 4e6p_A 159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG----------VDALFARYENRPRGEKKRLVGEAVPFGRMGTAE 228 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH----------HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTH
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh----------hhhhhhhhccCChHHHHHHHhccCCCCCCcCHH
Confidence 99999999876 458999999999999865311 001111111 111111112223456789999
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|++++.++..... .-.+.+|++.++
T Consensus 229 dva~~v~~L~s~~~~-~itG~~i~vdgG 255 (259)
T 4e6p_A 229 DLTGMAIFLASAESD-YIVSQTYNVDGG 255 (259)
T ss_dssp HHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCCccC-CCCCCEEEECcC
Confidence 999999988863322 223789999987
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=190.62 Aligned_cols=258 Identities=17% Similarity=0.158 Sum_probs=171.1
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|...+.+|+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ .+. + ...
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-~-----~~~ 62 (281)
T 3svt_A 4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDKL---AGAVQEL---------EAL-G-----ANG 62 (281)
T ss_dssp ----CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HTT-C-----CSS
T ss_pred CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HHh-C-----CCC
Confidence 45566889999999999999999999999999 5568888875432 2222111 100 0 012
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 63 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 142 (281)
T 3svt_A 63 GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG 142 (281)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 378899999996432111111222223478999999997321 2457788999999999999987663 23
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 143 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 166 (281)
T 3svt_A 143 GGSFVGISSIAASNTH--------------------------------------------------------RWFGAYGV 166 (281)
T ss_dssp CEEEEEECCHHHHSCC--------------------------------------------------------TTCTHHHH
T ss_pred CcEEEEEeCHHHcCCC--------------------------------------------------------CCChhHHH
Confidence 4589999998765432 22467999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
||...+.+.+.+ ..++++.+++||.|.++.... +... .......... .....+.+++|+
T Consensus 167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~----~~~~~~~~~~---------~p~~r~~~~~dv 230 (281)
T 3svt_A 167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA---ITES----AELSSDYAMC---------TPLPRQGEVEDV 230 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTC----HHHHHHHHHH---------CSSSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cccC----HHHHHHHHhc---------CCCCCCCCHHHH
Confidence 999999999866 457999999999998854311 0000 0111111111 122356789999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCCCCCccc-HHHHHHHHHHhhccCCCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s-~~el~~~l~~~~~~~~~~ 358 (399)
|++++.++..... .-.+..|++.++ ..++ ..++.+.+.+.++...+.
T Consensus 231 a~~~~~l~s~~~~-~itG~~~~vdgG--~~~~~~~~~~~~~~~~~~~~~~~ 278 (281)
T 3svt_A 231 ANMAMFLLSDAAS-FVTGQVINVDGG--QMLRRGPDFSAMLEPVFGRDALR 278 (281)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT--GGGSCCCCCHHHHHHHHCTTGGG
T ss_pred HHHHHHHhCcccC-CCCCCEEEeCCC--hhcccCCcchhccccccCCcccc
Confidence 9999998864322 223789999888 4455 678888888888865543
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=189.02 Aligned_cols=224 Identities=16% Similarity=0.188 Sum_probs=159.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++|+||||||+||+++++.|+++| +.|++++|+.. .......+. ..+++++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~l~------------------------~~~v~~v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTRPNSSKTTLLDEFQ------------------------SLGAIIVK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECTTCSCHHHHHHHH------------------------HTTCEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCC---CcEEEEECCCCchhhHHHHhh------------------------cCCCEEEE
Confidence 489999999999999999999999 45689999875 221111111 15788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccC-CceEEEEecceeecCcC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVK-LKVFVHVSTAYVAGERT 170 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~-~~~~v~~SS~~v~~~~~ 170 (399)
+|++ +.+.+..+++++|+|||+|+... +.++.++++++++. + +++||+ | +||...
T Consensus 65 ~Dl~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S---~~g~~~ 120 (318)
T 2r6j_A 65 GELD-------EHEKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVA-GNIKRFLP-S---DFGVEE 120 (318)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHH-CCCCEEEC-S---CCSSCT
T ss_pred ecCC-------CHHHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhc-CCCCEEEe-e---ccccCc
Confidence 9999 55666688889999999998632 45678899999986 5 899985 3 344211
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
.|. .+.. .....| .+|..+|+++++ .+++
T Consensus 121 ---~~~-----~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~~~~ 149 (318)
T 2r6j_A 121 ---DRI-----NALP----------------------------------------PFEALI-ERKRMIRRAIEE--ANIP 149 (318)
T ss_dssp ---TTC-----CCCH----------------------------------------HHHHHH-HHHHHHHHHHHH--TTCC
T ss_pred ---ccc-----cCCC----------------------------------------CcchhH-HHHHHHHHHHHh--cCCC
Confidence 110 0000 001358 999999999987 6899
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yn 330 (399)
++++||+.+++... ..++.....+....++++++..+++++++|+|+++..++..... . ++.|+
T Consensus 150 ~~~lr~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~--~~~~~ 213 (318)
T 2r6j_A 150 YTYVSANCFASYFI-------------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA-L--NRVVI 213 (318)
T ss_dssp BEEEECCEEHHHHH-------------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG-T--TEEEE
T ss_pred eEEEEcceehhhhh-------------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc-c--CeEEE
Confidence 99999988776311 11111112233334556777899999999999999999874321 1 46777
Q ss_pred ecC-CCCCcccHHHHHHHHHHhhccCC
Q 015874 331 VGS-SLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 331 i~~-~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+.+ + +.+|+.|+++.+.+.+|++.
T Consensus 214 ~~g~~--~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 214 YRPST--NIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp CCCGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred ecCCC--CccCHHHHHHHHHHHhCCCC
Confidence 754 4 56999999999999999764
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-22 Score=190.94 Aligned_cols=232 Identities=13% Similarity=0.177 Sum_probs=160.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc---cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID---SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+|+|+|||||||||+++++.|+++| +.|++++|+.... ...+.+. .+ ...+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~~-~l--------------------~~~~v~ 59 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLE-SF--------------------KASGAN 59 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHH-HH--------------------HTTTCE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCHHHHHHHH-HH--------------------HhCCCE
Confidence 5789999999999999999999999 4568899986432 1111111 00 125789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
++.+|++ +.+.+..+++++|+|||+|+... +.++.++++++++..++++||+ |+ ||.
T Consensus 60 ~v~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~ 116 (308)
T 1qyc_A 60 IVHGSID-------DHASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGN 116 (308)
T ss_dssp EECCCTT-------CHHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSS
T ss_pred EEEeccC-------CHHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---ccc
Confidence 9999999 45556677889999999998642 3456789999998623899984 43 442
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC-CchhhHhHHHHHHHHHHhhC
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW-PNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~l~~~~~ 247 (399)
.. .|. .+. .+ ...| .+|..+|++++. .
T Consensus 117 ~~---~~~-----~~~-----------------------------------------~p~~~~y-~sK~~~e~~~~~--~ 144 (308)
T 1qyc_A 117 DV---DNV-----HAV-----------------------------------------EPAKSVF-EVKAKVRRAIEA--E 144 (308)
T ss_dssp CT---TSC-----CCC-----------------------------------------TTHHHHH-HHHHHHHHHHHH--H
T ss_pred Cc---ccc-----ccC-----------------------------------------CcchhHH-HHHHHHHHHHHh--c
Confidence 11 110 000 11 2458 999999999987 5
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
+++++++||+.++|..... +... ......+....++++++..+++++++|+|++++.++..... . ++
T Consensus 145 ~~~~~~~r~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~--~~ 211 (308)
T 1qyc_A 145 GIPYTYVSSNCFAGYFLRS---LAQA-------GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-L--NK 211 (308)
T ss_dssp TCCBEEEECCEEHHHHTTT---TTCT-------TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-T--TE
T ss_pred CCCeEEEEeceeccccccc---cccc-------cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc-c--Ce
Confidence 8999999999998854311 1110 00001122334557777899999999999999998863221 1 56
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+|++.++. +.+|+.|+++.+.+.+|++.
T Consensus 212 ~~~~~g~~-~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 212 TLYLRLPA-NTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp EEECCCGG-GEEEHHHHHHHHHHHTTSCC
T ss_pred EEEEeCCC-CccCHHHHHHHHHHHhCCCC
Confidence 78876431 56999999999999999764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=180.96 Aligned_cols=219 Identities=17% Similarity=0.160 Sum_probs=154.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||++++++|+++| ++|.++.|+.... +...++ ..++
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~----------------------~~~~ 54 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSDL---VSLAKE----------------------CPGI 54 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHH----------------------STTC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHh----------------------ccCC
Confidence 34788999999999999999999999999 5668888865321 111111 1356
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK- 153 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~- 153 (399)
+++.+|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 55 ~~~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 127 (244)
T 1cyd_A 55 EPVCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV 127 (244)
T ss_dssp EEEECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEecCCC-------HHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC
Confidence 778999994 444445554 58999999996532 2456778999999999999988763 13
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 128 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 151 (244)
T 1cyd_A 128 PGSIVNVSSMVAHVTF--------------------------------------------------------PNLITYSS 151 (244)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CeEEEEEcchhhcCCC--------------------------------------------------------CCcchhHH
Confidence 5789999998766532 11357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|.+.|.+++.+ ..+++++++|||.|+++..... + . ...++.....+ ...+++++++|+
T Consensus 152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-~----~~~~~~~~~~~---------~~~~~~~~~~dv 215 (244)
T 1cyd_A 152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-A----DPEFARKLKER---------HPLRKFAEVEDV 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-C----CHHHHHHHHHH---------STTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-c----CHHHHHHHHhc---------CCccCCCCHHHH
Confidence 999999999876 2589999999999998643100 0 0 01112222111 123689999999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++...... ..+..+++.++
T Consensus 216 a~~~~~l~~~~~~~-~~G~~~~v~gG 240 (244)
T 1cyd_A 216 VNSILFLLSDRSAS-TSGGGILVDAG 240 (244)
T ss_dssp HHHHHHHHSGGGTT-CCSSEEEESTT
T ss_pred HHHHHHHhCchhhc-ccCCEEEECCC
Confidence 99999998743222 22678888776
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=187.90 Aligned_cols=250 Identities=12% Similarity=0.060 Sum_probs=165.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .+. .+.++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~--------~~~~~ 78 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVL---KATAEQI---------SSQ--------TGNKV 78 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------HSSCE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HHh--------cCCce
Confidence 35788999999999999999999999999 5668888875332 2221111 110 12578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 79 ~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 158 (302)
T 1w6u_A 79 HAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAA 158 (302)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999996432111111111223467999999996432 2457788999999999998887652 24578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||.+.+... .+...|+.+|.
T Consensus 159 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 182 (302)
T 1w6u_A 159 FLSITTIYAETGS--------------------------------------------------------GFVVPSASAKA 182 (302)
T ss_dssp EEEECCTHHHHCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEcccccccCC--------------------------------------------------------CCcchhHHHHH
Confidence 9999998655421 22357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.|.+++.+ ..+++++++|||.|+++.... ..... . ........+ .....+++++|+|++
T Consensus 183 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-~---~~~~~~~~~---------~p~~~~~~~~dva~~ 247 (302)
T 1w6u_A 183 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS--RLDPT-G---TFEKEMIGR---------IPCGRLGTVEELANL 247 (302)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC--------CCTT-S---HHHHHHHTT---------CTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh--hcccc-h---hhHHHHHhc---------CCcCCCCCHHHHHHH
Confidence 999999876 368999999999999863210 01010 0 001111111 112357889999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
++.++...... -.+.+|++.++ ..+++.++++.+.+..|.
T Consensus 248 ~~~l~~~~~~~-~~G~~~~v~gg--~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 248 AAFLCSDYASW-INGAVIKFDGG--EEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHTSGGGTT-CCSCEEEESTT--HHHHHHSTTGGGGGCCHH
T ss_pred HHHHcCCcccc-cCCCEEEECCC--eeeccCCccccchhhccc
Confidence 99988633221 12689999998 668888888777776654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=179.02 Aligned_cols=254 Identities=14% Similarity=0.102 Sum_probs=152.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ ... . ..+.++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-~-----~~~~~~~~ 62 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAERL---EETRQQI---------LAA-G-----VSEQNVNS 62 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHT-T-----CCGGGEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhc-c-----cCCCceeE
Confidence 678999999999999999999999999 5668888875322 2221111 000 0 01246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
+.+|+++++......+...+.+.++|+|||+||... ..+.++..+++|+.++.++++++.+. .+ .
T Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g 141 (278)
T 1spx_A 63 VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G 141 (278)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred EecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence 999999643211111111112238999999999753 22456778999999999999988763 13 7
Q ss_pred eEEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 156 VFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 156 ~~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
+||++||... +... .....|+.+
T Consensus 142 ~iv~isS~~~~~~~~--------------------------------------------------------~~~~~Y~~s 165 (278)
T 1spx_A 142 EIVNISSIASGLHAT--------------------------------------------------------PDFPYYSIA 165 (278)
T ss_dssp EEEEECCTTSSSSCC--------------------------------------------------------TTSHHHHHH
T ss_pred eEEEEecccccccCC--------------------------------------------------------CCccHHHHH
Confidence 9999999865 4321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..|+++++++||.|.++........................ .. ....+++.+|+|
T Consensus 166 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----p~~~~~~~~dvA 236 (278)
T 1spx_A 166 KAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE----CV-----PAGVMGQPQDIA 236 (278)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----HC-----TTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh----cC-----CCcCCCCHHHHH
Confidence 99999998765 35899999999999987542110000000000000111111 01 113478999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhh
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~ 352 (399)
++++.++.......-.+..|++.++ ..+++.|+++.+.+..
T Consensus 237 ~~v~~l~s~~~~~~~tG~~~~vdgG--~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 237 EVIAFLADRKTSSYIIGHQLVVDGG--SSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHHHHCHHHHTTCCSCEEEESTT--GGGC------------
T ss_pred HHHHHHcCccccCcccCcEEEECCC--cccccCcccccHHHHh
Confidence 9999988643221012689999998 6799999999887754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=175.39 Aligned_cols=224 Identities=15% Similarity=0.136 Sum_probs=153.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.... +...+++ .. .+.++.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 65 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAMA---TKAVEDL---------RM---------EGHDVS 65 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceE
Confidence 3678999999999999999999999999 5678888875322 1111111 10 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~-~-------~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
++.+|++++ +.+..++ .++|+|||+||... . .+.+...+++|+.++.++++++.+.
T Consensus 66 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (260)
T 3awd_A 66 SVVMDVTNT-------ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIML 138 (260)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 999999964 3332332 47999999999654 1 2446778999999999999988652
Q ss_pred -cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 152 -~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
.+..+||++||.+.+.... ..+...
T Consensus 139 ~~~~~~iv~~sS~~~~~~~~------------------------------------------------------~~~~~~ 164 (260)
T 3awd_A 139 EQKQGVIVAIGSMSGLIVNR------------------------------------------------------PQQQAA 164 (260)
T ss_dssp HHTCEEEEEECCGGGTSCCS------------------------------------------------------SSCCHH
T ss_pred hcCCCEEEEEecchhcccCC------------------------------------------------------CCCccc
Confidence 2567999999986543211 012267
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.+|.+.|.+++.+ ..+++++++|||.|+++.... .+.. ..+......+ .....+++.
T Consensus 165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~ 228 (260)
T 3awd_A 165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GMEK-----PELYDAWIAG---------TPMGRVGQP 228 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HHTC-----HHHHHHHHHT---------CTTSSCBCH
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--ccCC-----hHHHHHHHhc---------CCcCCCCCH
Confidence 999999999999876 268999999999999976420 0000 1112222111 112357899
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|++++.++...... -.+..|++.++
T Consensus 229 ~dva~~~~~l~~~~~~~-~~G~~~~v~gg 256 (260)
T 3awd_A 229 DEVASVVQFLASDAASL-MTGAIVNVDAG 256 (260)
T ss_dssp HHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcc-CCCcEEEECCc
Confidence 99999999988643222 12689999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-21 Score=179.38 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=151.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce-
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI- 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i- 87 (399)
.+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ +.++
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 60 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASG---ARLILIDREAAAL---DRAAQEL---------------------GAAVA 60 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------GGGEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------cccce
Confidence 3678999999999999999999999999 5678888875322 2211111 1356
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+.... +.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 61 ~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~i 139 (254)
T 2wsb_A 61 ARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAI 139 (254)
T ss_dssp EEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 8899999964321111111111 3579999999997542 2456778999999988888876542 257899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... ..+...|+.+|.+
T Consensus 140 v~isS~~~~~~~~------------------------------------------------------~~~~~~Y~~sK~a 165 (254)
T 2wsb_A 140 VNLGSMSGTIVNR------------------------------------------------------PQFASSYMASKGA 165 (254)
T ss_dssp EEECCGGGTSCCS------------------------------------------------------SSCBHHHHHHHHH
T ss_pred EEEecchhccCCC------------------------------------------------------CCcchHHHHHHHH
Confidence 9999987654211 0122579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.|.+++.+ ..+++++++|||.|+++...... . ........... .....+++.+|+|+++
T Consensus 166 ~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~---~----~~~~~~~~~~~---------~~~~~~~~~~dva~~~ 229 (254)
T 2wsb_A 166 VHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR---E----RPELFETWLDM---------TPMGRCGEPSEIAAAA 229 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH---T----CHHHHHHHHHT---------STTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc---c----ChHHHHHHHhc---------CCCCCCCCHHHHHHHH
Confidence 99998866 34899999999999986431100 0 00111111111 1124578999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++...... -.+..+++.++
T Consensus 230 ~~l~~~~~~~-~~G~~~~v~gG 250 (254)
T 2wsb_A 230 LFLASPAASY-VTGAILAVDGG 250 (254)
T ss_dssp HHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHhCccccc-ccCCEEEECCC
Confidence 9988643221 12688999876
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=177.84 Aligned_cols=215 Identities=17% Similarity=0.179 Sum_probs=152.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||+++++.|+++| .+|.+..|+..... ..++.
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~------------------------------~~~~~ 71 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRN---YRVVATSRSIKPSA------------------------------DPDIH 71 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCCCCS------------------------------STTEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhhcc------------------------------cCceE
Confidence 4678999999999999999999999999 56788888865431 14688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++|
T Consensus 72 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv 151 (260)
T 3un1_A 72 TVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIV 151 (260)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99999996432111111111223489999999997532 2567888999999999999987431 3567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... ..+...|+.||.+.
T Consensus 152 ~isS~~~~~~~~------------------------------------------------------~~~~~~Y~~sKaa~ 177 (260)
T 3un1_A 152 SITTSLVDQPMV------------------------------------------------------GMPSALASLTKGGL 177 (260)
T ss_dssp EECCTTTTSCBT------------------------------------------------------TCCCHHHHHHHHHH
T ss_pred EEechhhccCCC------------------------------------------------------CCccHHHHHHHHHH
Confidence 999986654221 12345799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++++++||.|.++.... . . ..... .......+.+++|+|++++
T Consensus 178 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~------~--~----~~~~~---------~~~p~~r~~~~~dva~av~ 236 (260)
T 3un1_A 178 NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA------E--T----HSTLA---------GLHPVGRMGEIRDVVDAVL 236 (260)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG------G--G----HHHHH---------TTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH------H--H----HHHHh---------ccCCCCCCcCHHHHHHHHH
Confidence 9998876 348999999999999875411 0 0 11111 1122346788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+.. .... .+.+|++.++
T Consensus 237 ~L~~-~~~i--tG~~i~vdGG 254 (260)
T 3un1_A 237 YLEH-AGFI--TGEILHVDGG 254 (260)
T ss_dssp HHHH-CTTC--CSCEEEESTT
T ss_pred Hhcc-cCCC--CCcEEEECCC
Confidence 8843 2222 2789999887
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=174.73 Aligned_cols=218 Identities=19% Similarity=0.235 Sum_probs=152.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|+++.|+.+.. +.+.+++ .++.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~----------------------~~~~ 55 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQADL---DSLVREC----------------------PGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHS----------------------TTCE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHc----------------------CCCC
Confidence 3678999999999999999999999999 5668888864321 2111110 2456
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-C
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-L 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~ 154 (399)
++.+|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ .
T Consensus 56 ~~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~ 128 (244)
T 3d3w_A 56 PVCVDLGD-------WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTTC-------HHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCC-------HHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 77999995 444445554 58999999997532 2456788999999999999888663 23 6
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .+...|+.+
T Consensus 129 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (244)
T 3d3w_A 129 GAIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCST 152 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cEEEEeCchhhccCC--------------------------------------------------------CCCchHHHH
Confidence 789999998755421 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|++.|.+++.+ ..+++++++|||.|+++..... +... . .......+ .....+++++|+|
T Consensus 153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~-~----~~~~~~~~---------~~~~~~~~~~dva 216 (244)
T 3d3w_A 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSDP-H----KAKTMLNR---------IPLGKFAEVEHVV 216 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCST-T----HHHHHHHT---------CTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccCh-H----HHHHHHhh---------CCCCCCcCHHHHH
Confidence 99999999876 3589999999999998653110 0000 0 11111111 1234688999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.++.|++.++
T Consensus 217 ~~~~~l~~~~~~~-~~G~~~~v~gG 240 (244)
T 3d3w_A 217 NAILFLLSDRSGM-TTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHcCccccC-CCCCEEEECCC
Confidence 9999998643221 12679999887
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=176.52 Aligned_cols=229 Identities=10% Similarity=0.087 Sum_probs=156.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+|+||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ .. .+.++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~ 63 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAG---ASVVVTDLKSEGA---EAVAAAI---------RQ---------AGGKA 63 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHT---CEEEEEESSHHHH---HHHHHHH---------HH---------TTCCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcE
Confidence 34788999999999999999999999999 5568888865432 2222211 00 13678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 64 ~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 143 (256)
T 3gaf_A 64 IGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAIL 143 (256)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 999999996432111111122223479999999997542 2567888999999999999987642 2457999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 144 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 167 (256)
T 3gaf_A 144 NISSMAGENTN--------------------------------------------------------VRMASYGSSKAAV 167 (256)
T ss_dssp EECCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcCHHHcCCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99998754321 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..++++..++||.|.++.... +.. ......... ......+.+.+|+|++++
T Consensus 168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~-----~~~~~~~~~---------~~p~~r~~~~~dva~~~~ 230 (256)
T 3gaf_A 168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---VLT-----PEIERAMLK---------HTPLGRLGEAQDIANAAL 230 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH---HCC-----HHHHHHHHT---------TCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCcEEEEEEEccccCchhhh---ccC-----HHHHHHHHh---------cCCCCCCCCHHHHHHHHH
Confidence 9999866 458999999999998753210 000 011111111 112345789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 231 ~L~s~~~~-~itG~~i~vdgG 250 (256)
T 3gaf_A 231 FLCSPAAA-WISGQVLTVSGG 250 (256)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCCccc-CccCCEEEECCC
Confidence 98864322 223789999998
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=177.39 Aligned_cols=242 Identities=10% Similarity=0.043 Sum_probs=150.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||+++++.|+++| ++|.++.|+.... +...+.+ ... +.. ......++
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-~~~-~~~~~~~~ 65 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEG---ATVAACDLDRAAA---QETVRLL---------GGP-GSK-EGPPRGNH 65 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHTC-----------------------CC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHHH---------Hhc-Ccc-ccccCcce
Confidence 34678999999999999999999999999 5678888875322 1111111 000 000 00001468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCc-cEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNEL-DIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~-D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~ 155 (399)
.++.+|+++++......+...+.+.++ |+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..
T Consensus 66 ~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g 145 (264)
T 2pd6_A 66 AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG 145 (264)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc
Confidence 899999996432110111111122345 999999997542 2467788999999999999988763 13 56
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .+...|+.+|
T Consensus 146 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 169 (264)
T 2pd6_A 146 SIINISSIVGKVGN--------------------------------------------------------VGQTNYAASK 169 (264)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------TTBHHHHHHH
T ss_pred eEEEECChhhccCC--------------------------------------------------------CCChhhHHHH
Confidence 89999998544321 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+++.+ ..+++++++|||.|+++...... . .+......+ .....+++.+|+|+
T Consensus 170 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~------~~~~~~~~~---------~~~~~~~~~~dva~ 231 (264)
T 2pd6_A 170 AGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP---Q------KVVDKITEM---------IPMGHLGDPEDVAD 231 (264)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGG---------CTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC---H------HHHHHHHHh---------CCCCCCCCHHHHHH
Confidence 9999988776 36899999999999997642110 0 011111110 11235789999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCCCCCcccHHH
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVS 343 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~e 343 (399)
+++.++..... .-.+..+++.++ ..++...
T Consensus 232 ~~~~l~~~~~~-~~~G~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 232 VVAFLASEDSG-YITGTSVEVTGG--LFMAENL 261 (264)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT--C------
T ss_pred HHHHHcCCccc-CCCCCEEEECCC--ceecccc
Confidence 99998864322 122788999988 4454443
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=179.73 Aligned_cols=243 Identities=12% Similarity=0.068 Sum_probs=158.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc---------ccHHHHHHHHHhhhhhHHHHHhhhccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI---------DSAALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
..++||+||||||+|+||+++++.|+++| .+|.+..|+... ....+...+.+ .
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~------ 67 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAG---ADIAICDRCENSDVVGYPLATADDLAETVALV---------E------ 67 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH---------H------
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCccccccccccccHHHHHHHHHHH---------H------
Confidence 35789999999999999999999999999 566888887432 11222211111 0
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+.
T Consensus 68 ---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 144 (281)
T 3s55_A 68 ---KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG 144 (281)
T ss_dssp ---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---hcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 013678999999996432111111222223479999999997542 2567888999999999999987542
Q ss_pred ---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 015874 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (399)
Q Consensus 152 ---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
.+..+||++||...+... ...
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 168 (281)
T 3s55_A 145 MIKRNYGRIVTVSSMLGHSAN--------------------------------------------------------FAQ 168 (281)
T ss_dssp HHHHTCEEEEEECCGGGGSCC--------------------------------------------------------TTC
T ss_pred HHHcCCCEEEEECChhhcCCC--------------------------------------------------------CCC
Confidence 256789999998655421 123
Q ss_pred chhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCC---CcccCcchHHHHHHHhhcCccccccCCCcccc
Q 015874 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP---GWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (399)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
..|+.+|...+.+.+.+ ..|+++.+++||.|+++...... .+... +...........+........
T Consensus 169 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 242 (281)
T 3s55_A 169 ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD------LEKPTLKDVESVFASLHLQYA 242 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------------CCHHHHHHHHHHHCSSSC
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc------ccccchhHHHHHHHhhhccCc
Confidence 57999999999998876 35899999999999997652100 00000 000000000000001111236
Q ss_pred CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 301 ~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+++.+|+|++++.++..... .-.+.++++.++
T Consensus 243 ~~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdgG 275 (281)
T 3s55_A 243 PFLKPEEVTRAVLFLVDEASS-HITGTVLPIDAG 275 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCCccc-CCCCCEEEECCC
Confidence 789999999999999874332 223789999987
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-20 Score=170.25 Aligned_cols=204 Identities=14% Similarity=0.143 Sum_probs=137.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+||||||||+||++++++|+++|. ++|.+++|+.+.... ....++.+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~~---------------------------~~~~~~~~ 71 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIHK---------------------------PYPTNSQI 71 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSCS---------------------------SCCTTEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhcc---------------------------cccCCcEE
Confidence 4457899999999999999999999982 356888998654321 11357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+.+|++ +.+.+..+++++|+|||+|+.... ...+.++++++++. ++++||++||.++|+..
T Consensus 72 ~~~Dl~-------d~~~~~~~~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~ 132 (236)
T 3qvo_A 72 IMGDVL-------NHAALKQAMQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEV 132 (236)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC----
T ss_pred EEecCC-------CHHHHHHHhcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCC
Confidence 999999 566666888999999999986321 13466889999885 78999999999999864
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
.+...+ ..+ .....+...+..+|..+.. .++
T Consensus 133 ~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~~~l~~--~gi 163 (236)
T 3qvo_A 133 PGKFVE--WNN---------------------------------------------AVIGEPLKPFRRAADAIEA--SGL 163 (236)
T ss_dssp -----------------------------------------------------------CGGGHHHHHHHHHHHT--SCS
T ss_pred Cccccc--chh---------------------------------------------hcccchHHHHHHHHHHHHH--CCC
Confidence 321000 000 0112344455666766665 689
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++|||.++++.... +. ...........+++.+|+|++++.++....... ++.|
T Consensus 164 ~~~~vrPg~i~~~~~~~---~~-------------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~--g~~~ 219 (236)
T 3qvo_A 164 EYTILRPAWLTDEDIID---YE-------------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHI--GENI 219 (236)
T ss_dssp EEEEEEECEEECCSCCC---CE-------------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTT--TEEE
T ss_pred CEEEEeCCcccCCCCcc---eE-------------------EeccCCCCCCcEECHHHHHHHHHHHHcCccccc--CeeE
Confidence 99999999999865411 00 001111112358999999999999998433222 7899
Q ss_pred EecCC
Q 015874 330 HVGSS 334 (399)
Q Consensus 330 ni~~~ 334 (399)
+++++
T Consensus 220 ~i~~~ 224 (236)
T 3qvo_A 220 GINQP 224 (236)
T ss_dssp EEECS
T ss_pred EecCC
Confidence 99887
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=175.50 Aligned_cols=229 Identities=14% Similarity=0.124 Sum_probs=152.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+... ..+...+++ .. .+.++.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~l---------~~---------~~~~~~ 74 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSK--AAEEVVAEL---------KK---------LGAQGV 74 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCchH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 3678999999999999999999999999 566888883211 122222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
++.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. ..
T Consensus 75 ~~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 147 (274)
T 1ja9_A 75 AIQADISKP-------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR 147 (274)
T ss_dssp EEECCTTSH-------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999953 3333333 389999999997532 2456778999999999999988764 11
Q ss_pred CceEEEEecceee-cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 154 LKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 154 ~~~~v~~SS~~v~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
..+||++||...+ ... .....|+
T Consensus 148 ~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~ 171 (274)
T 1ja9_A 148 GGRIILTSSIAAVMTGI--------------------------------------------------------PNHALYA 171 (274)
T ss_dssp EEEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHH
T ss_pred CCEEEEEcChHhccCCC--------------------------------------------------------CCCchHH
Confidence 2689999998776 321 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCC-----CCCcccCcchHHHHHHHhhcCccccccCCCccccCe
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-----FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
.+|.+.|.+++.+ ..+++++++|||.|+++.... .+....... ......... ......++
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~ 241 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLA---------NMNPLKRI 241 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHH---------HTSTTSSC
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHH---------hcCCCCCc
Confidence 9999999998876 358999999999998754310 000000000 001111111 11234578
Q ss_pred eeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 303 i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++|+|++++.++...... -.+++|+++++
T Consensus 242 ~~~~dva~~i~~l~~~~~~~-~~G~~~~v~gG 272 (274)
T 1ja9_A 242 GYPADIGRAVSALCQEESEW-INGQVIKLTGG 272 (274)
T ss_dssp BCHHHHHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCccccc-ccCcEEEecCC
Confidence 99999999999988643221 12679999886
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.2e-20 Score=172.13 Aligned_cols=230 Identities=13% Similarity=0.080 Sum_probs=151.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+.+++|+|+||||+|+||++++++|+++| ++|.++.| +.+. .+...+++ .. .+.+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~l---------~~---------~~~~ 58 (261)
T 1gee_A 3 KDLEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKEDE---ANSVLEEI---------KK---------VGGE 58 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHHH---------HH---------TTCE
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEcCCChHH---HHHHHHHH---------Hh---------cCCc
Confidence 45789999999999999999999999999 56688888 4322 22222111 00 1256
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~ 155 (399)
+.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..
T Consensus 59 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~ 138 (261)
T 1gee_A 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG 138 (261)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC
Confidence 8899999996432110111111122379999999997532 2457788999999999998887653 13 57
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .+...|+.+|
T Consensus 139 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 162 (261)
T 1gee_A 139 TVINMSSVHEKIPW--------------------------------------------------------PLFVHYAASK 162 (261)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEeCCHHhcCCC--------------------------------------------------------CCccHHHHHH
Confidence 99999997644311 2245799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+.+.+ ..+++++++|||.|+++.... ... ........... .....+++.+|+|+
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~~dva~ 226 (261)
T 1gee_A 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE---KFA----DPEQRADVESM---------IPMGYIGEPEEIAA 226 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH---HHH----SHHHHHHHHTT---------CTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh---ccc----ChhHHHHHHhc---------CCCCCCcCHHHHHH
Confidence 9999888765 358999999999999865310 000 00111111110 11235789999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++...... -.+..+++.++
T Consensus 227 ~~~~l~~~~~~~-~~G~~~~v~gg 249 (261)
T 1gee_A 227 VAAWLASSEASY-VTGITLFADGG 249 (261)
T ss_dssp HHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHhCccccC-CCCcEEEEcCC
Confidence 999988632221 12678999887
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=174.03 Aligned_cols=226 Identities=13% Similarity=0.092 Sum_probs=154.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| .+|.+..|+..... ...+++ .+ .+.++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~~~---~~~~~~---------~~---------~~~~~~~ 58 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQASAE---KFENSM---------KE---------KGFKARG 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHH---HHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------Hh---------cCCceEE
Confidence 578999999999999999999999999 56688888754322 222111 00 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++++.+. ++..+||+
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 138 (247)
T 3lyl_A 59 LVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIIS 138 (247)
T ss_dssp EECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 9999996432111111111122368999999997632 2567788999999999999987653 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|.+.+
T Consensus 139 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 162 (247)
T 3lyl_A 139 IGSVVGSAGN--------------------------------------------------------PGQTNYCAAKAGVI 162 (247)
T ss_dssp ECCTHHHHCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EcchhhccCC--------------------------------------------------------CCcHHHHHHHHHHH
Confidence 9998654421 22357999999988
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..++++.+++||.|.++...... . ...... ........+.+.+|+|++++.
T Consensus 163 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~------~~~~~~---------~~~~~~~~~~~~~dva~~i~~ 224 (247)
T 3lyl_A 163 GFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---D------EQKSFI---------ATKIPSGQIGEPKDIAAAVAF 224 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---H------HHHHHH---------HTTSTTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---H------HHHHHH---------hhcCCCCCCcCHHHHHHHHHH
Confidence 888765 45899999999999886542211 0 111111 111234568899999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.++.+++.++
T Consensus 225 l~s~~~~-~~tG~~i~vdgG 243 (247)
T 3lyl_A 225 LASEEAK-YITGQTLHVNGG 243 (247)
T ss_dssp HHSGGGT-TCCSCEEEESTT
T ss_pred HhCCCcC-CccCCEEEECCC
Confidence 8864322 223789999887
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=175.78 Aligned_cols=230 Identities=15% Similarity=0.104 Sum_probs=153.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. ++..+++ .. .+.++
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~ 65 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDG---AHVVVSSRKQENV---DRTVATL---------QG---------EGLSV 65 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCce
Confidence 35788999999999999999999999999 5668888875322 2211111 00 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 66 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~ 145 (260)
T 2zat_A 66 TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGS 145 (260)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence 889999996432111111111223479999999996421 2457788999999999999887642 35689
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 146 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 169 (260)
T 2zat_A 146 VLIVSSVGAYHPF--------------------------------------------------------PNLGPYNVSKT 169 (260)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEEechhhcCCC--------------------------------------------------------CCchhHHHHHH
Confidence 9999998766531 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.+ ..++++++++||.|.++.... .+... ....... .......+++.+|+|++
T Consensus 170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-----~~~~~~~---------~~~~~~~~~~~~dva~~ 233 (260)
T 2zat_A 170 ALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMDK-----ARKEYMK---------ESLRIRRLGNPEDCAGI 233 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSSH-----HHHHHHH---------HHHTCSSCBCGGGGHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccCh-----HHHHHHH---------hcCCCCCCCCHHHHHHH
Confidence 999998876 358999999999998754310 00000 0000000 00123457899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+..++..... .-.+.+|++.++
T Consensus 234 v~~l~s~~~~-~~tG~~~~vdgG 255 (260)
T 2zat_A 234 VSFLCSEDAS-YITGETVVVGGG 255 (260)
T ss_dssp HHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHcCcccC-CccCCEEEECCC
Confidence 9988864322 112789999988
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=174.22 Aligned_cols=228 Identities=14% Similarity=0.095 Sum_probs=152.2
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+++|+|+||||+ |+||+++++.|+++| ++|.++.|+.......+.+.+ . ..+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~-------------~---------~~~ 59 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLAE-------------A---------LGG 59 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHT---CEEEEEESCGGGHHHHHHHHH-------------H---------TTC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHH-------------h---------cCC
Confidence 4678999999999 999999999999999 566888887532112222211 1 023
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 60 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 139 (261)
T 2wyu_A 60 ALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (261)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred cEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence 7889999996432111111111223479999999997531 2457788999999999999999874 123
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||.+.+... .....|+.+
T Consensus 140 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 163 (261)
T 2wyu_A 140 GGIVTLTYYASEKVV--------------------------------------------------------PKYNVMAIA 163 (261)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEEecccccCCC--------------------------------------------------------CCchHHHHH
Confidence 589999997654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.+ ..++++++++||.|+++...... ............. ....+.+.+|+|
T Consensus 164 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~---------p~~~~~~~~dva 227 (261)
T 2wyu_A 164 KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-------GFTKMYDRVAQTA---------PLRRNITQEEVG 227 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-------THHHHHHHHHHHS---------TTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-------ccHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence 99999998866 34899999999999986542111 0111111111110 112467899999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..|++.++
T Consensus 228 ~~v~~l~s~~~~-~~tG~~~~vdgG 251 (261)
T 2wyu_A 228 NLGLFLLSPLAS-GITGEVVYVDAG 251 (261)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcChhhc-CCCCCEEEECCC
Confidence 999998863222 222789999887
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=171.76 Aligned_cols=220 Identities=16% Similarity=0.145 Sum_probs=150.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+.... +...+++ .+. .+.++.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~--------~~~~~~~ 61 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAG---STVIITGTSGERA---KAVAEEI---------ANK--------YGVKAHG 61 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------HHH--------HCCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHHH---------Hhh--------cCCceEE
Confidence 678999999999999999999999999 5678888865332 2221111 000 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
+.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (248)
T 2pnf_A 62 VEMNLLSE-------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134 (248)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333333 379999999997542 2456778999999998888766542 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 135 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (248)
T 2pnf_A 135 RWGRIVNISSVVGFTGN--------------------------------------------------------VGQVNYS 158 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhcCCC--------------------------------------------------------CCCchHH
Confidence 56899999997543311 1135799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|...+.+++.+ ..+++++++|||.++++..... . .......... .....+++.+|
T Consensus 159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~----~-----~~~~~~~~~~---------~~~~~~~~~~d 220 (248)
T 2pnf_A 159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL----S-----EEIKQKYKEQ---------IPLGRFGSPEE 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----C-----HHHHHHHHHT---------CTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc----c-----HHHHHHHHhc---------CCCCCccCHHH
Confidence 9999999988765 3589999999999988654211 0 0111111110 11245889999
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++...... ..+++|++.++
T Consensus 221 va~~~~~l~~~~~~~-~~G~~~~v~gg 246 (248)
T 2pnf_A 221 VANVVLFLCSELASY-ITGEVIHVNGG 246 (248)
T ss_dssp HHHHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHHHhCchhhc-CCCcEEEeCCC
Confidence 999999988643221 12689999876
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=172.47 Aligned_cols=223 Identities=13% Similarity=0.132 Sum_probs=153.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec-CCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA-ADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+++|+|+||||+|+||++++++|+++| ++|.++.|+ ..... ...+++ .. .+.+
T Consensus 3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~---~~~~~~---------~~---------~~~~ 58 (258)
T 3afn_B 3 PDLKGKRVLITGSSQGIGLATARLFARAG---AKVGLHGRKAPANID---ETIASM---------RA---------DGGD 58 (258)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCCTTHH---HHHHHH---------HH---------TTCE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEECCCchhhHH---HHHHHH---------Hh---------cCCc
Confidence 45789999999999999999999999999 567888898 44322 211111 00 1257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccc-cCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAI-TKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~-~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+.++.+|++++ +.+..++ .++|+|||+||. ... .+.++..+++|+.++.++++++.+.
T Consensus 59 ~~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (258)
T 3afn_B 59 AAFFAADLATS-------EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPH 131 (258)
T ss_dssp EEEEECCTTSH-------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred eEEEECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 88999999953 3333333 379999999996 321 2346778999999999999877542
Q ss_pred ---cC--C---ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 152 ---VK--L---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 152 ---~~--~---~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
.+ . .+||++||...+...
T Consensus 132 ~~~~~~~~~~~~~iv~~sS~~~~~~~------------------------------------------------------ 157 (258)
T 3afn_B 132 LAAAAKASGQTSAVISTGSIAGHTGG------------------------------------------------------ 157 (258)
T ss_dssp HHHHHHHHTSCEEEEEECCTHHHHCC------------------------------------------------------
T ss_pred HHhcccCCCCCcEEEEecchhhccCC------------------------------------------------------
Confidence 11 2 789999998654410
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
..+...|+.+|.+.|.+++.+ ..+++++++|||.|+++..... . ..+......+ ..
T Consensus 158 -~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~------~~~~~~~~~~---------~~ 218 (258)
T 3afn_B 158 -GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---T------QDVRDRISNG---------IP 218 (258)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---C------HHHHHHHHTT---------CT
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---C------HHHHHHHhcc---------CC
Confidence 022357999999999998865 3489999999999998754211 0 1122222221 12
Q ss_pred ccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 299 ~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...+++++|+|++++.++.......-.++.|++.++
T Consensus 219 ~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg 254 (258)
T 3afn_B 219 MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254 (258)
T ss_dssp TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence 346899999999999988643220112689999886
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-20 Score=167.45 Aligned_cols=202 Identities=15% Similarity=0.200 Sum_probs=142.3
Q ss_pred cEEEEecCcchhHHHHHHHHH-HhCCCcCeEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAAD-IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll-~~g~~V~~v~~~~R~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+||||||+||++++++|+ ++| ++|.++.|+.+ ....+. + ...++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r~~~~~~~~~~---~----------------------~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD---MHITLYGRQLKTRIPPEI---I----------------------DHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEESSHHHHSCHHH---H----------------------TSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEecCccccchhhc---c----------------------CCCceEEE
Confidence 569999999999999999999 889 56789999754 332211 0 13678999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|++ +.+.+..+++++|+|||+|+.. |+. +.++++++++. +.++||++||.++|+...
T Consensus 58 ~~D~~-------d~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 58 EGSFQ-------NPGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSC
T ss_pred ECCCC-------CHHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCC
Confidence 99999 5566667888999999999863 344 88999999885 788999999999887432
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
+...+. . .....+.|+.+|...|.+++. .+++
T Consensus 117 ~~~~~~----------------~------------------------------~~~~~~~y~~~K~~~e~~~~~--~~i~ 148 (221)
T 3r6d_A 117 VALEKW----------------T------------------------------FDNLPISYVQGERQARNVLRE--SNLN 148 (221)
T ss_dssp HHHHHH----------------H------------------------------HHTSCHHHHHHHHHHHHHHHH--SCSE
T ss_pred cccccc----------------c------------------------------ccccccHHHHHHHHHHHHHHh--CCCC
Confidence 100000 0 001122799999999999987 6999
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH--HhccCCCCCCcE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM--VAHAKQPSDANI 328 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~--~~~~~~~~~~~~ 328 (399)
++++|||.++++... +. .............+++.+|+|++++.++ ....... ++.
T Consensus 149 ~~~vrpg~v~~~~~~---~~------------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~--~~~ 205 (221)
T 3r6d_A 149 YTILRLTWLYNDPEX---TD------------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFH--RTS 205 (221)
T ss_dssp EEEEEECEEECCTTC---CC------------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGT--TEE
T ss_pred EEEEechhhcCCCCC---cc------------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhh--cce
Confidence 999999999986321 00 0000011111234899999999999999 6333221 567
Q ss_pred EEecCC
Q 015874 329 YHVGSS 334 (399)
Q Consensus 329 yni~~~ 334 (399)
+.+.++
T Consensus 206 ~~i~~~ 211 (221)
T 3r6d_A 206 IGVGEP 211 (221)
T ss_dssp EEEECT
T ss_pred eeecCC
Confidence 777765
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=174.52 Aligned_cols=220 Identities=15% Similarity=0.140 Sum_probs=150.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+|+||||+|+||++++++|+++| ++|.+..|+.+.. +...+++ ..++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~ 55 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEEG---KAMAAEL---------------------ADAA 55 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHT---------------------GGGE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------hcCc
Confidence 34788999999999999999999999999 5668888875322 2221111 1347
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 56 ~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 135 (260)
T 1nff_A 56 RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI 135 (260)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEE
Confidence 889999996432111111111122389999999997532 2467788999999998887766542 256899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 136 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 159 (260)
T 1nff_A 136 INISSIEGLAGT--------------------------------------------------------VACHGYTATKFA 159 (260)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHH
T ss_pred EEEeehhhcCCC--------------------------------------------------------CCchhHHHHHHH
Confidence 999998765421 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..|++++++|||.|+++... +... ... ......+++.+|+|+++
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~--------------~~~-----~~~~~~~~~~~dvA~~v 216 (260)
T 1nff_A 160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE--------------DIF-----QTALGRAAEPVEVSNLV 216 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT--------------TCS-----CCSSSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchh--------------hHH-----hCccCCCCCHHHHHHHH
Confidence 99998765 35899999999999986541 1000 000 01123578899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..|++.++
T Consensus 217 ~~l~s~~~~-~~~G~~~~v~gG 237 (260)
T 1nff_A 217 VYLASDESS-YSTGAEFVVDGG 237 (260)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCcccc-CCcCCEEEECCC
Confidence 998864322 122789999887
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=174.85 Aligned_cols=237 Identities=15% Similarity=0.139 Sum_probs=154.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ ... .+.++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~--------~~~~~~~ 61 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEG---AHIVLVARQVDRL---HEAARSL---------KEK--------FGVRVLE 61 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------HCCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHH---------HHh--------cCCceEE
Confidence 678999999999999999999999999 5668888875332 2222111 000 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 62 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 141 (263)
T 3ai3_A 62 VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIH 141 (263)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 9999996432111111111223479999999997532 2467788999999999999887642 25689999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 142 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 165 (263)
T 3ai3_A 142 NASICAVQPL--------------------------------------------------------WYEPIYNVTKAALM 165 (263)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ECchhhcCCC--------------------------------------------------------CCcchHHHHHHHHH
Confidence 9998766532 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+ ..+++++++|||.|+++..... ..+..... ............ ......+++.+|+|+++
T Consensus 166 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~dvA~~~ 237 (263)
T 3ai3_A 166 MFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE--------HAPIKRFASPEELANFF 237 (263)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH--------HCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc--------CCCCCCCcCHHHHHHHH
Confidence 998876 3689999999999998643100 00000000 000111111110 01234688999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... ..-.+..|++.++
T Consensus 238 ~~l~s~~~-~~~~G~~~~vdgG 258 (263)
T 3ai3_A 238 VFLCSERA-TYSVGSAYFVDGG 258 (263)
T ss_dssp HHHTSTTC-TTCCSCEEEESTT
T ss_pred HHHcCccc-cCCCCcEEEECCC
Confidence 98886322 1122789999887
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-20 Score=173.88 Aligned_cols=229 Identities=17% Similarity=0.145 Sum_probs=157.4
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|...++||+|+||||+|+||+++++.|+++| .+|.+..|+.+..... .+++ +
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~---~~~~---------------------~ 56 (271)
T 3tzq_B 4 SMTAELENKVAIITGACGGIGLETSRVLARAG---ARVVLADLPETDLAGA---AASV---------------------G 56 (271)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSCHHHH---HHHH---------------------C
T ss_pred CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHH---HHHh---------------------C
Confidence 45667889999999999999999999999999 5668888887653221 1111 3
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 136 (271)
T 3tzq_B 57 RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA 136 (271)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 578899999996432111111121223479999999997622 2457788999999999999988432 3
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (271)
T 3tzq_B 137 GGGAIVNISSATAHAAY--------------------------------------------------------DMSTAYA 160 (271)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------SSCHHHH
T ss_pred CCCEEEEECCHHHcCCC--------------------------------------------------------CCChHHH
Confidence 56799999998755421 2235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.||...+.+.+.+ ..|+++++++||.|.++.... .+. .......... .....+...+|
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~------~~~~~~~~~~---------~~~~r~~~p~d 223 (271)
T 3tzq_B 161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GLP------QPIVDIFATH---------HLAGRIGEPHE 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----C------HHHHHHHHTT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cCC------HHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999998876 368999999999999976421 010 0111111111 11234678899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++..... .-.+..+++.++
T Consensus 224 vA~~v~~L~s~~~~-~itG~~i~vdGG 249 (271)
T 3tzq_B 224 IAELVCFLASDRAA-FITGQVIAADSG 249 (271)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccC-CcCCCEEEECCC
Confidence 99999998874332 223789999887
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-20 Score=172.19 Aligned_cols=228 Identities=15% Similarity=0.105 Sum_probs=140.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .. .+.++.
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 66 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYEL---NECLSKW---------QK---------KGFQVT 66 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCeeE
Confidence 3678999999999999999999999999 5668888865322 2211111 00 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+.....+ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 67 ~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~i 146 (266)
T 1xq1_A 67 GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNI 146 (266)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99999995322110111111122 679999999997532 2457778999999999999988432 267899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 147 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 170 (266)
T 1xq1_A 147 IFMSSIAGVVSA--------------------------------------------------------SVGSIYSATKGA 170 (266)
T ss_dssp EEEC------------------------------------------------------------------CCHHHHHHHH
T ss_pred EEEccchhccCC--------------------------------------------------------CCCchHHHHHHH
Confidence 999998765421 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..+++++++|||.|+++...... .. .+...... ......+++.+|+|+++
T Consensus 171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-----~~~~~~~~---------~~~~~~~~~~~dva~~~ 233 (266)
T 1xq1_A 171 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---DD-----EFKKVVIS---------RKPLGRFGEPEEVSSLV 233 (266)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHHHH
T ss_pred HHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---CH-----HHHHHHHh---------cCCCCCCcCHHHHHHHH
Confidence 99999876 34899999999999997642110 00 00111111 01122477899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++...... -.++.+++.++
T Consensus 234 ~~l~~~~~~~-~~G~~~~v~gG 254 (266)
T 1xq1_A 234 AFLCMPAASY-ITGQTICVDGG 254 (266)
T ss_dssp HHHTSGGGTT-CCSCEEECCCC
T ss_pred HHHcCccccC-ccCcEEEEcCC
Confidence 9888633221 12688999887
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.8e-20 Score=171.33 Aligned_cols=225 Identities=15% Similarity=0.100 Sum_probs=149.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|+++| ++|.++.|+.+. . ...+++ .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~-~---~~~~~~----------------------~~-~~ 53 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG-K---EVAEAI----------------------GG-AF 53 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH-H---HHHHHH----------------------TC-EE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhH-H---HHHHHh----------------------hC-CE
Confidence 678999999999999999999999999 566888887654 1 111111 14 78
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 54 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 133 (256)
T 2d1y_A 54 FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN 133 (256)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 8999996432111111111223479999999997532 2457788999999999999987652 24679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 134 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 157 (256)
T 2d1y_A 134 VASVQGLFAE--------------------------------------------------------QENAAYNASKGGLV 157 (256)
T ss_dssp ECCGGGTSBC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred EccccccCCC--------------------------------------------------------CCChhHHHHHHHHH
Confidence 9998654321 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh-cCccccccCCCccccCeeeHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA-QGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+.+.+ ..++++++++||.|.++... ..+.... ................+++.+|+|++++
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~ 224 (256)
T 2d1y_A 158 NLTRSLALDLAPLRIRVNAVAPGAIATEAVL-------------EAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 224 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------------HHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCeEEEEEeeCCccCchhh-------------hccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 998866 35899999999998764210 0000000 0000000111122356899999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..|++.++
T Consensus 225 ~l~s~~~~-~~~G~~~~v~gG 244 (256)
T 2d1y_A 225 FLASEKAS-FITGAILPVDGG 244 (256)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCchhc-CCCCCEEEECCC
Confidence 98864322 122789999887
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-20 Score=174.26 Aligned_cols=241 Identities=13% Similarity=0.082 Sum_probs=156.6
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC----------cccHHHHHHHHHhhhhhHHHHHhhh
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------IDSAALRFQNEVLAKDVFNVLKEKW 75 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~ 75 (399)
++..++||+|+||||+|+||.+++++|+++| .+|.+..|... .....+...+.+
T Consensus 9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------------- 72 (280)
T 3pgx_A 9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARLV------------- 72 (280)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHH-------------
T ss_pred cccccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHHH-------------
Confidence 3456889999999999999999999999999 56688887431 111222222211
Q ss_pred cccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHH
Q 015874 76 GTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFA 148 (399)
Q Consensus 76 ~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a 148 (399)
. ..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++
T Consensus 73 ~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 147 (280)
T 3pgx_A 73 E-----DQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRAT 147 (280)
T ss_dssp H-----TTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred H-----hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 0 013678899999996432111111111223479999999997642 2567788999999999999987
Q ss_pred Hhc---c-CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 015874 149 KKC---V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (399)
Q Consensus 149 ~~~---~-~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (399)
.+. . ...+||++||...+...
T Consensus 148 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 172 (280)
T 3pgx_A 148 VPAMIEAGNGGSIVVVSSSAGLKAT------------------------------------------------------- 172 (280)
T ss_dssp HHHHHHHCSCEEEEEECCGGGTSCC-------------------------------------------------------
T ss_pred HHHHHhcCCCCEEEEEcchhhccCC-------------------------------------------------------
Confidence 553 1 25689999998654421
Q ss_pred CCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc-cCCCcc
Q 015874 225 HGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKV 298 (399)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 298 (399)
.....|+.+|.+.+.+.+.+ ..|++++.++||.|.++...+ ......+..... ....+ ......
T Consensus 173 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~ 242 (280)
T 3pgx_A 173 -PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP--------EAMMEIFARHPS-FVHSFPPMPVQP 242 (280)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH--------HHHHHHHHHCGG-GGGGSCCBTTBC
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch--------hhhhhhhhcCch-hhhhhhhcccCC
Confidence 12357999999999998866 368999999999999865421 000111111100 00010 111112
Q ss_pred ccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 299 ~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
. .+++.+|+|++++.++..... .-.+..+++.++
T Consensus 243 ~-r~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 276 (280)
T 3pgx_A 243 N-GFMTADEVADVVAWLAGDGSG-TLTGTQIPVDKG 276 (280)
T ss_dssp S-SCBCHHHHHHHHHHHHSGGGT-TCSSCEEEESTT
T ss_pred C-CCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 2 489999999999998864332 223789999886
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-20 Score=172.32 Aligned_cols=223 Identities=11% Similarity=0.133 Sum_probs=148.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||+++++.|+++| .+|.++.|+........ ++ ...++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~---~~---------------------~~~~~ 55 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEG---ATVLGLDLKPPAGEEPA---AE---------------------LGAAV 55 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSCC------------------------------------C
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHHH---HH---------------------hCCce
Confidence 34789999999999999999999999999 56688888876542211 11 12578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-c---
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-V--- 152 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~--- 152 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 56 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 135 (257)
T 3tpc_A 56 RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGE 135 (257)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Confidence 899999996432111111222223489999999997531 2567888999999999999988763 1
Q ss_pred -----CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 153 -----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 153 -----~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
+..+||++||...+... ..
T Consensus 136 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 159 (257)
T 3tpc_A 136 PDADGERGVIVNTASIAAFDGQ--------------------------------------------------------IG 159 (257)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC--------------------------------------------------------TT
T ss_pred ccCCCCCeEEEEEechhhccCC--------------------------------------------------------CC
Confidence 34579999998765421 12
Q ss_pred CchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccc-cC
Q 015874 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI-MD 301 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 301 (399)
...|+.||...+.+.+.+ ..|+++++++||.|.++.....+ . ........ .... ..
T Consensus 160 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~------~~~~~~~~---------~~p~~~r 221 (257)
T 3tpc_A 160 QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---Q------DVQDALAA---------SVPFPPR 221 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------------C---------CSSSSCS
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---H------HHHHHHHh---------cCCCCCC
Confidence 357999999999988765 46899999999999886542111 0 00001110 1111 35
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+...+|+|++++.++.. ... .+..+++.++
T Consensus 222 ~~~~~dva~~v~~l~s~-~~i--tG~~i~vdGG 251 (257)
T 3tpc_A 222 LGRAEEYAALVKHICEN-TML--NGEVIRLDGA 251 (257)
T ss_dssp CBCHHHHHHHHHHHHHC-TTC--CSCEEEESTT
T ss_pred CCCHHHHHHHHHHHccc-CCc--CCcEEEECCC
Confidence 78899999999998863 222 2789999887
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=172.22 Aligned_cols=228 Identities=13% Similarity=0.090 Sum_probs=150.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+++|+|+||||+|+||+++++.|+++| ++|.++.| +.+. .+...+++ ... .+.+
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~---------~~~--------~~~~ 63 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGA---AQRLVAEL---------NAA--------RAGS 63 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHHH---------HHH--------STTC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChHH---HHHHHHHH---------HHh--------cCCc
Confidence 34688999999999999999999999999 56688888 4322 22222211 000 0247
Q ss_pred eEEEeccCCCC----CCCCCchhhHHHHhcCccEEEEcccccCc-------c-----------ccHHHHHHHhHHHHHHH
Q 015874 87 ITFVPGDISSE----DLGLKDSNLKEELWNELDIMVNSAAITKF-------D-----------ERYDVAFGINTLGVIHL 144 (399)
Q Consensus 87 i~~~~gDl~~~----~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~-----------~~~~~~~~~n~~~~~~l 144 (399)
+.++.+|++++ +......+...+.+.++|+|||+||.... . +.++..+++|+.++.++
T Consensus 64 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 143 (276)
T 1mxh_A 64 AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFL 143 (276)
T ss_dssp EEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHH
T ss_pred eEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHH
Confidence 88999999975 32111111111223479999999997532 1 55677899999999999
Q ss_pred HHHHHhc--cCC------ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhh
Q 015874 145 VNFAKKC--VKL------KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKN 216 (399)
Q Consensus 145 l~~a~~~--~~~------~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (399)
++++.+. .+. .+||++||...+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------- 176 (276)
T 1mxh_A 144 IRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL----------------------------------------------- 176 (276)
T ss_dssp HHHHHHTC-------CCCEEEEEECCGGGGSCC-----------------------------------------------
T ss_pred HHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC-----------------------------------------------
Confidence 9998874 233 789999998765421
Q ss_pred ccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccc
Q 015874 217 LGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (399)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (399)
.....|+.+|...+.+.+.+ ..|+++++++||.|.++ . . +.. .........
T Consensus 177 ---------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~---~~~------~~~~~~~~~---- 232 (276)
T 1mxh_A 177 ---------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A---MPQ------ETQEEYRRK---- 232 (276)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S---SCH------HHHHHHHTT----
T ss_pred ---------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c---CCH------HHHHHHHhc----
Confidence 12357999999999998766 34899999999999997 2 1 111 111121111
Q ss_pred ccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 292 ~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+ ..+++++.+|+|++++.++..... .-.+..+++.++
T Consensus 233 ~p----~~r~~~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 270 (276)
T 1mxh_A 233 VP----LGQSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 270 (276)
T ss_dssp CT----TTSCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CC----CCCCCCCHHHHHHHHHHHhCcccc-CccCcEEEECCc
Confidence 11 123378999999999998864322 112688999886
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-20 Score=173.55 Aligned_cols=244 Identities=16% Similarity=0.123 Sum_probs=157.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc---------ccHHHHHHHHHhhhhhHHHHHhhhccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI---------DSAALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
..+.||+||||||+|+||.++++.|+++| .+|.+..|+... ....+...+.+ ..
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~----- 71 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAATVKLV---------ED----- 71 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH---------HH-----
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecccccccccccccchHHHHHHHHHH---------Hh-----
Confidence 45789999999999999999999999999 556888876321 11122211111 00
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhc----
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC---- 151 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~---- 151 (399)
.+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+.
T Consensus 72 ----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 72 ----IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp ----HTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ----cCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 13688999999996432111111111223479999999998643 3567888999999999999987653
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
....+||++||...+..... + ......|
T Consensus 148 ~~~g~iv~isS~~~~~~~~~-----------~-----------------------------------------~~~~~~Y 175 (278)
T 3sx2_A 148 GTGGSIVLISSSAGLAGVGS-----------A-----------------------------------------DPGSVGY 175 (278)
T ss_dssp CSCEEEEEECCGGGTSCCCC-----------S-----------------------------------------SHHHHHH
T ss_pred CCCcEEEEEccHHhcCCCcc-----------C-----------------------------------------CCCchHh
Confidence 12568999999865432110 0 0112469
Q ss_pred hHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHh-hcCccccccCCCccccCeeeH
Q 015874 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 232 ~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v 305 (399)
+.||.+.+.+.+.+ ..+++++.++||.|.++.... ......+... .............. ..+++.
T Consensus 176 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p 246 (278)
T 3sx2_A 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN--------EFTREWLAKMAAATDTPGAMGNAMP-VEVLAP 246 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS--------HHHHHHHHHHHHHCC--CTTSCSSS-CSSBCH
T ss_pred HHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh--------hhHHHHHhhccchhhhhhhhhhhcC-cCcCCH
Confidence 99999999998866 458999999999998865421 0011111111 11111111222223 678899
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|++++.++..... .-.+..+++.++
T Consensus 247 ~dvA~~v~~l~s~~~~-~itG~~i~vdGG 274 (278)
T 3sx2_A 247 EDVANAVAWLVSDQAR-YITGVTLPVDAG 274 (278)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-cccCCEEeECCC
Confidence 9999999998864322 223789999887
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=168.18 Aligned_cols=225 Identities=13% Similarity=0.132 Sum_probs=141.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+|+||||+|+||++++++|+++| ++|.++. |+.... +...+.+ .. .+.++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G---~~V~~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 58 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMG---ANIVLNGSPASTSL---DATAEEF---------KA---------AGINVV 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECTTCSHH---HHHHHHH---------HH---------TTCCEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCcCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 578999999999999999999999999 4567774 444322 2221111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 59 ~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv 138 (247)
T 2hq1_A 59 VAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKII 138 (247)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999996432110111111122379999999997532 2457788999999999998887652 2567999
Q ss_pred EEecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 159 HVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 159 ~~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
++||.. .++. .....|+.+|..
T Consensus 139 ~~sS~~~~~~~---------------------------------------------------------~~~~~Y~~sK~a 161 (247)
T 2hq1_A 139 NITSIAGIIGN---------------------------------------------------------AGQANYAASKAG 161 (247)
T ss_dssp EECC------------------------------------------------------------------CHHHHHHHHH
T ss_pred EEcChhhccCC---------------------------------------------------------CCCcHhHHHHHH
Confidence 999974 3432 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.|.+++.+ ..++++++++||.+.++..... . .........+ .....+++.+|+|+++
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~-----~~~~~~~~~~---------~~~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL----P-----DKVKEMYLNN---------IPLKRFGTPEEVANVV 223 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----C-----HHHHHHHHTT---------STTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc----c-----hHHHHHHHhh---------CCCCCCCCHHHHHHHH
Confidence 99998876 3489999999999876432110 0 0111111111 1234588999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++...... -.+++|+++++
T Consensus 224 ~~l~~~~~~~-~~G~~~~v~gG 244 (247)
T 2hq1_A 224 GFLASDDSNY-ITGQVINIDGG 244 (247)
T ss_dssp HHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHcCccccc-ccCcEEEeCCC
Confidence 9888643221 12679999887
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-19 Score=169.79 Aligned_cols=225 Identities=14% Similarity=0.139 Sum_probs=151.6
Q ss_pred cHHhhcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 015874 5 SVVEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
+|+..+.+|+|+||||+ |+||+++++.|+++| ++|.++.|+.......+.+.+ .
T Consensus 2 ~mm~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~-------------~-------- 57 (265)
T 1qsg_A 2 SHMGFLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFAA-------------Q-------- 57 (265)
T ss_dssp ---CTTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHHH-------------H--------
T ss_pred ccccccCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEcCcHHHHHHHHHHHH-------------h--------
Confidence 34445788999999999 999999999999999 566888887622122222221 1
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc------------cccHHHHHHHhHHHHHH
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF------------DERYDVAFGINTLGVIH 143 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ 143 (399)
.....++.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.++.+
T Consensus 58 -~~~~~~~~~D~~~~-------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 129 (265)
T 1qsg_A 58 -LGSDIVLQCDVAED-------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 129 (265)
T ss_dssp -TTCCCEEECCTTCH-------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHH
T ss_pred -cCCcEEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHH
Confidence 02347889999964 3332332 368999999997531 24567789999999999
Q ss_pred HHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 015874 144 LVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (399)
Q Consensus 144 ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
+++++.+. .+..+||++||.+.+...
T Consensus 130 l~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 156 (265)
T 1qsg_A 130 MAKACRSMLNPGSALLTLSYLGAERAI----------------------------------------------------- 156 (265)
T ss_dssp HHHHHGGGEEEEEEEEEEECGGGTSBC-----------------------------------------------------
T ss_pred HHHHHHHHhccCCEEEEEcchhhccCC-----------------------------------------------------
Confidence 99999874 223589999997654321
Q ss_pred ccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCc
Q 015874 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297 (399)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
.....|+.+|...+.+.+.+ ..++++++++||.|.++...... ...........+.
T Consensus 157 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~--------- 217 (265)
T 1qsg_A 157 ---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVT--------- 217 (265)
T ss_dssp ---TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHS---------
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcC---------
Confidence 12357999999999998866 34899999999999987542111 1111121111110
Q ss_pred cccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 298 ~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
....+.+.+|+|++++.++..... .-.+..|++.++
T Consensus 218 p~~~~~~~~dva~~v~~l~s~~~~-~~tG~~~~vdgG 253 (265)
T 1qsg_A 218 PIRRTVTIEDVGNSAAFLCSDLSA-GISGEVVHVDGG 253 (265)
T ss_dssp TTSSCCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHhCchhc-CccCCEEEECCC
Confidence 112467899999999998863322 222688999887
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-20 Score=176.99 Aligned_cols=243 Identities=14% Similarity=0.106 Sum_probs=153.1
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+...+.+|+||||||+|+||++++++|+++| .+|.+..|+... ..+...+++ ......
T Consensus 19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G---~~V~~~~r~~~~--~~~~~~~~~-----------------~~~~~~ 76 (281)
T 3v2h_A 19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAG---ANIVLNGFGAPD--EIRTVTDEV-----------------AGLSSG 76 (281)
T ss_dssp ---CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEECCCCHH--HHHHHHHHH-----------------HTTCSS
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHHH-----------------hhccCC
Confidence 3456788999999999999999999999999 556777774321 122222211 011236
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..
T Consensus 77 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 156 (281)
T 3v2h_A 77 TVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG 156 (281)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 78999999996432111111222223479999999997532 2567788999999999999987542 2567
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 157 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 180 (281)
T 3v2h_A 157 RIINIASAHGLVAS--------------------------------------------------------PFKSAYVAAK 180 (281)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCcccccCC--------------------------------------------------------CCchHHHHHH
Confidence 89999998654321 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcC-ccccccCCCccccCeeeHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva 309 (399)
.+.+.+.+.+ ..|+++..++||.|.++...... ..... ....... ........+.....+++.+|+|
T Consensus 181 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~p~~r~~~~edvA 253 (281)
T 3v2h_A 181 HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI---PDQAR----TRGITEEQVINEVMLKGQPTKKFITVEQVA 253 (281)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------------CCTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc---chhhh----hcCCCHHHHHHHHHHhcCCCCCccCHHHHH
Confidence 9999998866 45899999999999987542110 00000 0000000 0001122334456799999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.|..+++.++
T Consensus 254 ~~v~~L~s~~a~-~itG~~i~vdGG 277 (281)
T 3v2h_A 254 SLALYLAGDDAA-QITGTHVSMDGG 277 (281)
T ss_dssp HHHHHHHSSGGG-GCCSCEEEESTT
T ss_pred HHHHHHcCCCcC-CCCCcEEEECCC
Confidence 999998863322 112789999887
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=173.45 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=153.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|+++| .+|.+..|+... ..+...+++ .. .+.++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 58 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEG---YNVAVNYAGSKE--KAEAVVEEI---------KA---------KGVDSFA 58 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTSCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCcEEE
Confidence 357899999999999999999999999 455776665421 122222111 00 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 59 ~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~ 138 (246)
T 3osu_A 59 IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIIN 138 (246)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999996432111111111223479999999997632 2567788999999999999988432 25679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.||...+
T Consensus 139 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 162 (246)
T 3osu_A 139 LSSVVGAVGN--------------------------------------------------------PGQANYVATKAGVI 162 (246)
T ss_dssp ECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EcchhhcCCC--------------------------------------------------------CCChHHHHHHHHHH
Confidence 9998654321 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.+ ..+++++.++||.|.++..... . .........+ .....+.+.+|+|++++.
T Consensus 163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~------~~~~~~~~~~---------~p~~r~~~~~dva~~v~~ 224 (246)
T 3osu_A 163 GLTKSAARELASRGITVNAVAPGFIVSDMTDAL---S------DELKEQMLTQ---------IPLARFGQDTDIANTVAF 224 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---C------HHHHHHHHTT---------CTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEEECCCcCCccccc---C------HHHHHHHHhc---------CCCCCCcCHHHHHHHHHH
Confidence 988765 4589999999999998654221 1 1122222221 123456788999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..|++.++
T Consensus 225 l~s~~~~-~itG~~i~vdgG 243 (246)
T 3osu_A 225 LASDKAK-YITGQTIHVNGG 243 (246)
T ss_dssp HTSGGGT-TCCSCEEEESTT
T ss_pred HhCcccc-CCCCCEEEeCCC
Confidence 8864322 223789999887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=173.87 Aligned_cols=237 Identities=15% Similarity=0.176 Sum_probs=156.5
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|...++||+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ .+ .+
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~ 59 (264)
T 3ucx_A 4 SMGGLLTDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVERL---EDVAKQV---------TD---------TG 59 (264)
T ss_dssp ---CTTTTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TT
T ss_pred CcCCCcCCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cC
Confidence 46677899999999999999999999999999 5668888865432 2222211 00 13
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKL 154 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~ 154 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. +..
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 139 (264)
T 3ucx_A 60 RRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK 139 (264)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 578999999996432111111222223479999999987421 2567888999999999999987653 123
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 140 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 163 (264)
T 3ucx_A 140 GAVVNVNSMVVRHSQ--------------------------------------------------------AKYGAYKMA 163 (264)
T ss_dssp CEEEEECCGGGGCCC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEECcchhccCC--------------------------------------------------------CccHHHHHH
Confidence 689999998654421 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCc-----chHHHHHHHhhcCccccccCCCccccCeee
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL-----KTINTLFVASAQGNLRCLVGETKVIMDVIP 304 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 304 (399)
|...+.+.+.+ ..++++..++||.|.++.... +.... .....+.... ........+.+
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~ 231 (264)
T 3ucx_A 164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS---YFEHQAGKYGTSVEDIYNAA---------AAGSDLKRLPT 231 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH---HHHHHHHHTTCCHHHHHHHH---------HTTSSSSSCCB
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH---HHHhhhhhcCCCHHHHHHHH---------hccCCcccCCC
Confidence 99999998866 468999999999998854310 00000 0000011111 11223456789
Q ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 305 v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+|+|++++.++..... .-.+..+++.++
T Consensus 232 p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 260 (264)
T 3ucx_A 232 EDEVASAILFMASDLAS-GITGQALDVNCG 260 (264)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 99999999998864332 223789999887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.5e-20 Score=171.10 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=149.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+||||||+|+||+++++.|+++| ++|.+..|+.+.. +...+++ ..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~ 62 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNEEKL---KSLGNAL---------------------KDNY 62 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------CSSE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHh---------------------ccCc
Confidence 45788999999999999999999999999 5668888865332 2222211 2578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
.++.+|+++ .+....+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 63 ~~~~~D~~~-------~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 135 (249)
T 3f9i_A 63 TIEVCNLAN-------KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY 135 (249)
T ss_dssp EEEECCTTS-------HHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEcCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 899999995 344444443 69999999997542 3567889999999999999887542 356
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 136 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 159 (249)
T 3f9i_A 136 GRIINISSIVGIAGN--------------------------------------------------------PGQANYCAS 159 (249)
T ss_dssp EEEEEECCCCC--CC--------------------------------------------------------SCSHHHHHH
T ss_pred cEEEEEccHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 789999998765432 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+++.+ ..++++.+++||.|.++...... . ........ ......+.+.+|+|
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~------~~~~~~~~---------~~~~~~~~~~~dva 221 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---E------KQREAIVQ---------KIPLGTYGIPEDVA 221 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---H------HHHHHHHH---------HCTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---H------HHHHHHHh---------cCCCCCCcCHHHHH
Confidence 99999988766 45899999999999886542110 0 11111111 11235678899999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.++.|++.++
T Consensus 222 ~~~~~l~s~~~~~-~tG~~~~vdgG 245 (249)
T 3f9i_A 222 YAVAFLASNNASY-ITGQTLHVNGG 245 (249)
T ss_dssp HHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHcCCccCC-ccCcEEEECCC
Confidence 9999988743322 23789999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=174.09 Aligned_cols=225 Identities=18% Similarity=0.137 Sum_probs=130.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+||||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ .. .+.++.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~ 61 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEAA---EAVAKQI---------VA---------DGGTAI 61 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4678999999999999999999999999 5568888865432 2222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----------FDERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.+|+++++......+...+.+.++|+|||+||... ..+.++..+++|+.++.++++++.+. .+..
T Consensus 62 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 141 (253)
T 3qiv_A 62 SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG 141 (253)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 9999999643211111111122348999999999731 12557788999999988887776542 2567
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+.. ...|+.+|
T Consensus 142 ~iv~isS~~~~~~-----------------------------------------------------------~~~Y~asK 162 (253)
T 3qiv_A 142 AIVNQSSTAAWLY-----------------------------------------------------------SNYYGLAK 162 (253)
T ss_dssp EEEEECC----------------------------------------------------------------------CCH
T ss_pred EEEEECCccccCC-----------------------------------------------------------CchhHHHH
Confidence 8999999876531 24599999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+++.+ ..++++.+++||.|.++...... . ..+......+ .....+...+|+|+
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~-----~~~~~~~~~~---------~~~~~~~~~~dva~ 225 (253)
T 3qiv_A 163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---P-----KEMVDDIVKG---------LPLSRMGTPDDLVG 225 (253)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------CCHHHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC---c-----HHHHHHHhcc---------CCCCCCCCHHHHHH
Confidence 9999998866 35899999999999987542110 0 0111111111 12234556789999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++...... -.++.|++.++
T Consensus 226 ~~~~l~s~~~~~-~tG~~~~vdgG 248 (253)
T 3qiv_A 226 MCLFLLSDEASW-ITGQIFNVDGG 248 (253)
T ss_dssp HHHHHHSGGGTT-CCSCEEEC---
T ss_pred HHHHHcCccccC-CCCCEEEECCC
Confidence 999988643321 12789999887
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-20 Score=175.46 Aligned_cols=231 Identities=11% Similarity=0.068 Sum_probs=155.2
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|...+++|+||||||+|+||+++++.|+++| .+|.+..|+.... +...+++. . .+
T Consensus 21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~~---------~---------~~ 76 (270)
T 3ftp_A 21 SMDKTLDKQVAIVTGASRGIGRAIALELARRG---AMVIGTATTEAGA---EGIGAAFK---------Q---------AG 76 (270)
T ss_dssp --CCTTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHHH---------H---------HT
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHH---------h---------cC
Confidence 45566889999999999999999999999999 5668888865432 22221110 0 13
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 77 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 156 (270)
T 3ftp_A 77 LEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARG 156 (270)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 578889999996432111111111223479999999997532 2567888999999999999987642 245
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 157 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 180 (270)
T 3ftp_A 157 GRIVNITSVVGSAGN--------------------------------------------------------PGQVNYAAA 180 (270)
T ss_dssp EEEEEECCHHHHHCC--------------------------------------------------------TTBHHHHHH
T ss_pred CEEEEECchhhCCCC--------------------------------------------------------CCchhHHHH
Confidence 789999998654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+.+.+ ..|+++++++||.|.++..... . ......... ......+.+.+|+|
T Consensus 181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~--~~~~~~~~~---------~~p~~r~~~pedvA 242 (270)
T 3ftp_A 181 KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL-------P--QEQQTALKT---------QIPLGRLGSPEDIA 242 (270)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS-------C--HHHHHHHHT---------TCTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc-------C--HHHHHHHHh---------cCCCCCCCCHHHHH
Confidence 99999888765 4589999999999877432110 0 011111111 11234578999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.|.++++.++
T Consensus 243 ~~v~~L~s~~~~-~itG~~i~vdGG 266 (270)
T 3ftp_A 243 HAVAFLASPQAG-YITGTTLHVNGG 266 (270)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCCCcC-CccCcEEEECCC
Confidence 999998863322 223789999887
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=171.95 Aligned_cols=227 Identities=15% Similarity=0.162 Sum_probs=150.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .. ..++.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~-------------~~------~~~~~ 57 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDVG---EKAAKSV-------------GT------PDQIQ 57 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH-------------CC------TTTEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh-------------hc------cCceE
Confidence 4788999999999999999999999999 5668888865322 2211111 00 14788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC-ceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL-KVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~-~~~ 157 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++.+.+. .+. .+|
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~i 137 (251)
T 1zk4_A 58 FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 99999996432111111111223469999999997532 2456788999999998888776542 244 789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 138 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 161 (251)
T 1zk4_A 138 INMSSIEGFVGD--------------------------------------------------------PSLGAYNASKGA 161 (251)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEeCCchhccCC--------------------------------------------------------CCCccchHHHHH
Confidence 999998765421 123579999999
Q ss_pred HHHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 238 GEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 238 ~E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.|.+++.+ ..+++++++|||.|+++.....+ . ....... ........+++.+|+|+
T Consensus 162 ~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~-----~~~~~~~--------~~~~~~~~~~~~~dva~ 224 (251)
T 1zk4_A 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP----G-----AEEAMSQ--------RTKTPMGHIGEPNDIAY 224 (251)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST----T-----HHHHHTS--------TTTCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC----c-----hhhhHHH--------hhcCCCCCCcCHHHHHH
Confidence 99988754 24799999999999986532110 0 0011100 01112245889999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++...... -.+..|++.++
T Consensus 225 ~~~~l~~~~~~~-~~G~~~~v~gG 247 (251)
T 1zk4_A 225 ICVYLASNESKF-ATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHcCccccc-ccCcEEEECCC
Confidence 999988643221 12678999887
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=167.16 Aligned_cols=227 Identities=13% Similarity=0.093 Sum_probs=150.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| ++|.++.|+.... +...+++. ...+.++.++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~-----------------~~~~~~~~~~~ 58 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSAETL---EETARTHW-----------------HAYADKVLRVR 58 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHS-----------------TTTGGGEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHH-----------------HhcCCcEEEEE
Confidence 6899999999999999999999999 5678888875322 22211110 00135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++.+.+. .+.++||
T Consensus 59 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 138 (250)
T 2cfc_A 59 ADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIV 138 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 99996432111111111122379999999997532 2457778999999998888776542 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 139 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 162 (250)
T 2cfc_A 139 NIASVASLVAF--------------------------------------------------------PGRSAYTTSKGAV 162 (250)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECChhhccCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998765421 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
|.+++.+ ..+++++++|||.|+++.... .... ..+......+ .....+.+.+|+|++++
T Consensus 163 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~----~~~~~~~~~~---------~~~~~~~~~~dva~~~~ 226 (250)
T 2cfc_A 163 LQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW---RLDQ----PELRDQVLAR---------IPQKEIGTAAQVADAVM 226 (250)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH---HHTS----HHHHHHHHTT---------CTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEEeCcCccCcccc---ccCC----HHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9998876 348999999999999976411 0000 0111111111 11235789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 227 ~l~~~~~~-~~~G~~~~v~gG 246 (250)
T 2cfc_A 227 FLAGEDAT-YVNGAALVMDGA 246 (250)
T ss_dssp HHHSTTCT-TCCSCEEEESTT
T ss_pred HHcCchhh-cccCCEEEECCc
Confidence 98863222 112678999876
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=175.75 Aligned_cols=229 Identities=15% Similarity=0.119 Sum_probs=156.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||+++++.|+++| .+|.+..|+.... .+...+.+ . ..+.++.
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~--~~~~~~~~----------~--------~~~~~~~ 100 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEG---ANIAIAYLDEEGD--ANETKQYV----------E--------KEGVKCV 100 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH----------H--------TTTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHHH----------H--------hcCCcEE
Confidence 4688999999999999999999999999 5668888876422 11111111 0 0135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 101 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 99999996432111111222233479999999997531 2567888999999999999998874 34568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 181 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 204 (291)
T 3ijr_A 181 TASIVAYEGN--------------------------------------------------------ETLIDYSATKGAIV 204 (291)
T ss_dssp ECCTHHHHCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EechHhcCCC--------------------------------------------------------CCChhHHHHHHHHH
Confidence 9998766532 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.+ ..++++..++||.|.++.... ... ...... .........+.+.+|+|++++.
T Consensus 205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~-----~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~ 267 (291)
T 3ijr_A 205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFD-----EKKVSQ---------FGSNVPMQRPGQPYELAPAYVY 267 (291)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSC-----HHHHHH---------TTTTSTTSSCBCGGGTHHHHHH
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCC-----HHHHHH---------HHccCCCCCCcCHHHHHHHHHH
Confidence 998866 458999999999998854200 000 001111 1112234567789999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+++.++
T Consensus 268 L~s~~~~-~itG~~i~vdGG 286 (291)
T 3ijr_A 268 LASSDSS-YVTGQMIHVNGG 286 (291)
T ss_dssp HHSGGGT-TCCSCEEEESSS
T ss_pred HhCCccC-CCcCCEEEECCC
Confidence 8864332 223789999887
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=171.19 Aligned_cols=228 Identities=18% Similarity=0.152 Sum_probs=151.6
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.||+|+||||+ |+||+++++.|+++| ++|.++.|+.......+.+.+ . ..+
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~-------------~---------~~~ 72 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREG---AQLAFTYATPKLEKRVREIAK-------------G---------FGS 72 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHH-------------H---------TTC
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHH-------------h---------cCC
Confidence 4788999999999 999999999999999 566888887632112222211 1 023
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-c-C
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-V-K 153 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~-~ 153 (399)
+.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. . +
T Consensus 73 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 152 (285)
T 2p91_A 73 DLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR 152 (285)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 6788999996432111111111223479999999997532 2457788999999999999998774 1 3
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||.+.+... .....|+.
T Consensus 153 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 176 (285)
T 2p91_A 153 NGAIVTLSYYGAEKVV--------------------------------------------------------PHYNVMGI 176 (285)
T ss_dssp CCEEEEEECGGGTSBC--------------------------------------------------------TTTTHHHH
T ss_pred CCEEEEEccchhccCC--------------------------------------------------------CCccHHHH
Confidence 4799999997654321 12357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|...+.+.+.+ ..|+++++++||.|.++...... ............. ....+.+.+|+
T Consensus 177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~---------p~~~~~~~~dv 240 (285)
T 2p91_A 177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-------GFHLLMEHTTKVN---------PFGKPITIEDV 240 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-------THHHHHHHHHHHS---------TTSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-------chHHHHHHHHhcC---------CCCCCcCHHHH
Confidence 999999998765 35899999999999987542111 0111111111110 11236789999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+..|++.++
T Consensus 241 a~~~~~l~s~~~~-~~tG~~~~vdgg 265 (285)
T 2p91_A 241 GDTAVFLCSDWAR-AITGEVVHVDNG 265 (285)
T ss_dssp HHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHcCCccc-CCCCCEEEECCC
Confidence 9999998863222 222678999887
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=168.79 Aligned_cols=183 Identities=16% Similarity=0.153 Sum_probs=137.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||++++++|+++ +|.++.|+... .+++.+++ .. +++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~---~~~~~~~~----------------------~~-~~~~~ 49 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGA---LAELAREV----------------------GA-RALPA 49 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHH---HHHHHHHH----------------------TC-EECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHH---HHHHHHhc----------------------cC-cEEEe
Confidence 68999999999999999999885 56888886432 22222111 12 78899
Q ss_pred cCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++++. +..+||++||
T Consensus 50 D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS 121 (207)
T 2yut_A 50 DLAD-------ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA 121 (207)
T ss_dssp CTTS-------HHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred eCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9995 444445555 89999999997532 2467788999999999999999653 6789999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .+...|+.+|...|.++
T Consensus 122 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 145 (207)
T 2yut_A 122 YPRYVQV--------------------------------------------------------PGFAAYAAAKGALEAYL 145 (207)
T ss_dssp CHHHHSS--------------------------------------------------------TTBHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCcchHHHHHHHHHHHH
Confidence 9776532 22357999999999999
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..+++++++|||.++++.. . +.+....++++++|+|++++.++.
T Consensus 146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~-------~---------------------~~~~~~~~~~~~~dva~~~~~~~~ 197 (207)
T 2yut_A 146 EAARKELLREGVHLVLVRLPAVATGLW-------A---------------------PLGGPPKGALSPEEAARKVLEGLF 197 (207)
T ss_dssp HHHHHHHHTTTCEEEEECCCCBCSGGG-------G---------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhCCEEEEEecCcccCCCc-------c---------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence 876 2589999999999987431 0 011234789999999999999997
Q ss_pred h
Q 015874 318 A 318 (399)
Q Consensus 318 ~ 318 (399)
.
T Consensus 198 ~ 198 (207)
T 2yut_A 198 R 198 (207)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=170.19 Aligned_cols=231 Identities=12% Similarity=0.095 Sum_probs=150.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...++ ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------------------~~~~~~~ 62 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAG---ATVAIADLDVMAA---QAVVAG---------------------LENGGFA 62 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHT---------------------CTTCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHH---------------------HhcCCeE
Confidence 678999999999999999999999999 5668888865321 111111 0126788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~v 158 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..+||
T Consensus 63 ~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv 142 (263)
T 3ak4_A 63 VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIV 142 (263)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999996432111111111122379999999997532 2457788999999999999987653 23 57999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 143 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 166 (263)
T 3ak4_A 143 NTASLAAKVGA--------------------------------------------------------PLLAHYSASKFAV 166 (263)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EecccccccCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCc---ccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW---VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+.+.+.+ ..+++++++|||.|+++.......+ ..... .......... ......+++.+|+|+
T Consensus 167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~p~~~~~~~~dvA~ 236 (263)
T 3ak4_A 167 FGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMT-PEAVRAEYVS---------LTPLGRIEEPEDVAD 236 (263)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSC-HHHHHHHHHH---------TCTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccC-cHHHHHHHHh---------cCCCCCCcCHHHHHH
Confidence 9988766 3589999999999988542100000 00000 0001111111 112345889999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.+..|++.++
T Consensus 237 ~v~~l~s~~~~-~~tG~~~~vdgG 259 (263)
T 3ak4_A 237 VVVFLASDAAR-FMTGQGINVTGG 259 (263)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHhCcccc-CCCCCEEEECcC
Confidence 99998864322 122789999887
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=168.57 Aligned_cols=218 Identities=13% Similarity=0.152 Sum_probs=147.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
||+|+||||+|+||++++++|+++|+ +|.++ .|+.... +.+.+++ .. .+.++.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~---~v~~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~~ 56 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSAKAA---EEVSKQI---------EA---------YGGQAITF 56 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHH---HHHHHHH---------HH---------HTCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHH---HHHHHHH---------Hh---------cCCcEEEE
Confidence 58999999999999999999999994 55664 5553322 2221111 00 12578899
Q ss_pred eccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 91 PGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 57 ~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 57 GGDVSKE-------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp ECCTTSH-------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 9999964 3333333 379999999997542 2457778999999999999988763 25
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 130 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (244)
T 1edo_A 130 KGRIINIASVVGLIGN--------------------------------------------------------IGQANYAA 153 (244)
T ss_dssp CEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------CCCccchh
Confidence 6899999998554321 12357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|...+.+.+.+ ..+++++++|||.|+++..... . ......... . .....+++.+|+
T Consensus 154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~------~~~~~~~~~-~--------~~~~~~~~~~dv 215 (244)
T 1edo_A 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---G------EDMEKKILG-T--------IPLGRTGQPENV 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---C------HHHHHHHHT-S--------CTTCSCBCHHHH
T ss_pred hHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---C------hHHHHHHhh-c--------CCCCCCCCHHHH
Confidence 999999888765 3589999999999988543110 0 011111111 1 112357899999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++.......-.++.|++.++
T Consensus 216 a~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 216 AGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 99999988432221112678999886
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-20 Score=172.56 Aligned_cols=234 Identities=14% Similarity=0.124 Sum_probs=154.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+..... ..+.+.+ . .+.++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~--------~~~~~ 66 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAVEVTEKVGK-------------E--------FGVKT 66 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHHHHHHHHHH-------------H--------HTCCE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCcchhhHHHHHHHHH-------------h--------cCCee
Confidence 3678999999999999999999999999 56788998754431 1111111 1 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
.++.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ....+
T Consensus 67 ~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 146 (265)
T 1h5q_A 67 KAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGS 146 (265)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCce
Confidence 899999996432111111111123469999999997532 2456778999999999999988653 12478
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+...... . .+..+...|+.+|.
T Consensus 147 iv~~sS~~~~~~~~~~--~-----------------------------------------------~~~~~~~~Y~~sK~ 177 (265)
T 1h5q_A 147 IVVTSSMSSQIINQSS--L-----------------------------------------------NGSLTQVFYNSSKA 177 (265)
T ss_dssp EEEECCGGGTSCCEEE--T-----------------------------------------------TEECSCHHHHHHHH
T ss_pred EEEeCCchhhcccccc--c-----------------------------------------------cccccccccHHHHH
Confidence 9999998655421100 0 00122467999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.|.+++.+ ..+++++++|||.|+++..... . .......... .....+++.+|+|++
T Consensus 178 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~------~~~~~~~~~~---------~~~~~~~~~~dva~~ 239 (265)
T 1h5q_A 178 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---D------KKIRDHQASN---------IPLNRFAQPEEMTGQ 239 (265)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---C------HHHHHHHHHT---------CTTSSCBCGGGGHHH
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---c------hhHHHHHHhc---------CcccCCCCHHHHHHH
Confidence 999999876 3489999999999988654211 0 0111111110 012347889999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++...... -.+..|++.++
T Consensus 240 ~~~l~~~~~~~-~~G~~~~v~gG 261 (265)
T 1h5q_A 240 AILLLSDHATY-MTGGEYFIDGG 261 (265)
T ss_dssp HHHHHSGGGTT-CCSCEEEECTT
T ss_pred HHhhccCchhc-CcCcEEEecCC
Confidence 99988643221 12788999887
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.3e-20 Score=171.66 Aligned_cols=229 Identities=14% Similarity=0.125 Sum_probs=156.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||++++++|+++| .+|.+..|+.+. .+.+.+++ +.++.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------------------~~~~~ 57 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESN---IARIREEF---------------------GPRVH 57 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------------------GGGEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHh---------------------CCcce
Confidence 5789999999999999999999999999 566888887532 22222211 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||++
T Consensus 58 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 58 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 99999996442111112222334579999999997642 3567888999999999999999874 234589999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 138 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~ 161 (255)
T 4eso_A 138 SSVADEGGH--------------------------------------------------------PGMSVYSASKAALVS 161 (255)
T ss_dssp CCGGGSSBC--------------------------------------------------------TTBHHHHHHHHHHHH
T ss_pred CChhhcCCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998755421 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.+ ..|+++..++||.|.++..... +... .....+...... ......+...+|+|++++.+
T Consensus 162 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~--~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L 229 (255)
T 4eso_A 162 FASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITE--AERAEFKTLGDN---------ITPMKRNGTADEVARAVLFL 229 (255)
T ss_dssp HHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCH--HHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCCh--hhHHHHHHHHhc---------cCCCCCCcCHHHHHHHHHHH
Confidence 98766 4589999999999998754211 1111 000011111111 01223467899999999988
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.. . ..-.+..+++.++
T Consensus 230 ~s~-~-~~itG~~i~vdGG 246 (255)
T 4eso_A 230 AFE-A-TFTTGAKLAVDGG 246 (255)
T ss_dssp HHT-C-TTCCSCEEEESTT
T ss_pred cCc-C-cCccCCEEEECCC
Confidence 874 2 2223789999988
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.4e-20 Score=172.84 Aligned_cols=239 Identities=16% Similarity=0.125 Sum_probs=157.6
Q ss_pred HhhcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 7 VEFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 7 ~~~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
...+++|+|+||||+ |+||+++++.|+++| .+|.+..|+.......+.+.+. .
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~----------------------~ 63 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREG---AELAFTYVGDRFKDRITEFAAE----------------------F 63 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHH----------------------T
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcC---CCEEEEecchhhHHHHHHHHHH----------------------c
Confidence 356788999999999 999999999999999 5668888874333233322221 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.+...+++|+.++.++++++.+.
T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (271)
T 3ek2_A 64 GSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML 143 (271)
T ss_dssp TCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 357889999996432111111111222478999999997532 2457778999999999999998774
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
.+..+||++||.+.+... .....|
T Consensus 144 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 167 (271)
T 3ek2_A 144 SDDASLLTLSYLGAERAI--------------------------------------------------------PNYNTM 167 (271)
T ss_dssp EEEEEEEEEECGGGTSBC--------------------------------------------------------TTTTHH
T ss_pred ccCceEEEEeccccccCC--------------------------------------------------------CCccch
Confidence 234589999998654421 223579
Q ss_pred hHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 232 ~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
+.+|.+.+.+.+.+ ..++++++++||.|.++..... ............. .....+...+
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~pe 231 (271)
T 3ek2_A 168 GLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESN---------SPLKRNVTIE 231 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHH---------STTSSCCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhc---------CCcCCCCCHH
Confidence 99999999998866 4589999999999988654211 1111112211111 1123467889
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHH
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSIL 345 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~ 345 (399)
|+|++++.++..... .-.+..+++.++ ..+++.++.
T Consensus 232 dva~~i~~l~s~~~~-~~tG~~i~vdgG--~~~~~~~~~ 267 (271)
T 3ek2_A 232 QVGNAGAFLLSDLAS-GVTAEVMHVDSG--FNAVVGGMA 267 (271)
T ss_dssp HHHHHHHHHHSGGGT-TCCSEEEEESTT--GGGBCCCC-
T ss_pred HHHHHHHHHcCcccC-CeeeeEEEECCC--eeeehhhhh
Confidence 999999999874322 223789999998 556655543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-19 Score=167.24 Aligned_cols=231 Identities=19% Similarity=0.149 Sum_probs=152.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+++ .. .+.++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 62 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKEL---NDCLTQW---------RS---------KGFKVEA 62 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 678999999999999999999999999 5668888865332 2211111 00 1247889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+...+.+ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 63 ~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (260)
T 2ae2_A 63 SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV 142 (260)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999996432111111111122 579999999997532 2467788999999999999988542 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 143 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 166 (260)
T 2ae2_A 143 FISSVSGALAV--------------------------------------------------------PYEAVYGATKGAM 166 (260)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcchhhccCC--------------------------------------------------------CCcchHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..++++++++||.+.++.... +... ......+..... ......+++.+|+|++++
T Consensus 167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~dvA~~v~ 233 (260)
T 2ae2_A 167 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD-PEQKENLNKLID---------RCALRRMGEPKELAAMVA 233 (260)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-HHHHHHHHHHHH---------TSTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccC-hhhHHHHHHHHh---------cCCCCCCCCHHHHHHHHH
Confidence 9999876 348999999999998743210 0000 000000001111 112345889999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 234 ~l~s~~~~-~~tG~~~~vdgG 253 (260)
T 2ae2_A 234 FLCFPAAS-YVTGQIIYVDGG 253 (260)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCcccc-CCCCCEEEECCC
Confidence 88863322 122788999887
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-19 Score=167.03 Aligned_cols=224 Identities=19% Similarity=0.182 Sum_probs=150.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| .+|.++.|+.+ ....+.+.+ .+.++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~-~~~~~~l~~----------------------~~~~~~~ 55 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAG---ANIVLNGFGDP-APALAEIAR----------------------HGVKAVH 55 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC-HHHHHHHHT----------------------TSCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCch-HHHHHHHHh----------------------cCCceEE
Confidence 578999999999999999999999999 55688888765 111111110 1246888
Q ss_pred EeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 90 VPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
+.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 56 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 128 (255)
T 2q2v_A 56 HPADLSDV-------AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR 128 (255)
T ss_dssp ECCCTTSH-------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999953 3333333 389999999997532 2457788999999988888776432 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (255)
T 2q2v_A 129 NWGRIINIASVHGLVGS--------------------------------------------------------TGKAAYV 152 (255)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEcCchhccCC--------------------------------------------------------CCchhHH
Confidence 56899999998765421 1135799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc----ccccCCCccccCee
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL----RCLVGETKVIMDVI 303 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i 303 (399)
.+|...+.+.+.+ ..++++++++||.|.++... . .... .... .+.. ..+.........++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~--~~~~-~~~~-~~~~~~~~~~~~~~~~p~~~~~ 221 (255)
T 2q2v_A 153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ-------K--QIDD-RAAN-GGDPLQAQHDLLAEKQPSLAFV 221 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-------H--HHHH-HHHH-TCCHHHHHHHHHTTTCTTCCCB
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-------h--hccc-cccc-ccchHHHHHHHHhccCCCCCCc
Confidence 9999999998866 35899999999999885421 0 0000 0000 0000 00101112234689
Q ss_pred eHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 304 ~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.+|+|++++.++..... .-.+..|++.++
T Consensus 222 ~~~dvA~~~~~l~s~~~~-~~tG~~~~vdgG 251 (255)
T 2q2v_A 222 TPEHLGELVLFLCSEAGS-QVRGAAWNVDGG 251 (255)
T ss_dssp CHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCccC-CCCCCEEEECCC
Confidence 999999999988864322 112688999886
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=170.29 Aligned_cols=231 Identities=12% Similarity=0.077 Sum_probs=154.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++|+||||||+|+||.++++.|+++| .+|.+..|+.+.. +...+++ . ..+.++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~-------------~-----~~~~~~ 57 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTKEKL---EEAKLEI-------------E-----QFPGQI 57 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH-------------C-----CSTTCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH-------------H-----hcCCcE
Confidence 45789999999999999999999999999 5568888875432 2222211 0 113578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 58 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 137 (257)
T 3imf_A 58 LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGN 137 (257)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcE
Confidence 999999996432111111222223479999999996432 2567888999999999999988542 24678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.||.
T Consensus 138 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 161 (257)
T 3imf_A 138 IINMVATYAWDAG--------------------------------------------------------PGVIHSAAAKA 161 (257)
T ss_dssp EEEECCGGGGSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCcHHHHHHHH
Confidence 9999998654421 12357999999
Q ss_pred HHHHHHHHh------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 237 MGEMLMQQS------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 237 ~~E~~l~~~------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
..+.+.+.. ..|++++.++||.|.++..... .+... . +...... ......+...+|+|+
T Consensus 162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-~----~~~~~~~---------~~p~~r~~~pedvA~ 226 (257)
T 3imf_A 162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-E----MAKRTIQ---------SVPLGRLGTPEEIAG 226 (257)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------C----CSHHHHT---------TSTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-H----HHHHHHh---------cCCCCCCcCHHHHHH
Confidence 999888765 2389999999999988754210 00000 0 0001111 112235788999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.+..+++.++
T Consensus 227 ~v~~L~s~~~~-~itG~~i~vdGG 249 (257)
T 3imf_A 227 LAYYLCSDEAA-YINGTCMTMDGG 249 (257)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHcCchhc-CccCCEEEECCC
Confidence 99998864332 223789999887
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=173.14 Aligned_cols=228 Identities=18% Similarity=0.147 Sum_probs=146.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| .+|.+..|+.... ++..+++ ..++.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 58 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGG---AKVVIVDRDKAGA---ERVAGEI---------------------GDAAL 58 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------CTTEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHHH---HHHHHHh---------------------CCceE
Confidence 4678999999999999999999999999 5678888875432 2222111 35789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-c--C----
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V--K---- 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~--~---- 153 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. . +
T Consensus 59 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 138 (261)
T 3n74_A 59 AVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQ 138 (261)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999996432111111111223478999999997541 2557778999999999999887653 1 1
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 139 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 162 (261)
T 3n74_A 139 ECVILNVASTGAGRPR--------------------------------------------------------PNLAWYNA 162 (261)
T ss_dssp CEEEEEECCTTTTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CeEEEEeCchhhcCCC--------------------------------------------------------CCccHHHH
Confidence 3469999998654321 22356999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|.+.+.+.+.+ ..+++++.++||.|.++......+... . ..............+++.+|+
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~dv 228 (261)
T 3n74_A 163 TKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS---------E-----EIRKKFRDSIPMGRLLKPDDL 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCc---------H-----HHHHHHhhcCCcCCCcCHHHH
Confidence 999999998866 458999999999998865421100000 0 000011112234568899999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+..+++.++
T Consensus 229 a~~~~~l~s~~~~-~itG~~i~vdgG 253 (261)
T 3n74_A 229 AEAAAFLCSPQAS-MITGVALDVDGG 253 (261)
T ss_dssp HHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHcCCccc-CcCCcEEEecCC
Confidence 9999998863322 223789999988
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=169.37 Aligned_cols=225 Identities=13% Similarity=0.147 Sum_probs=151.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++|++ .|.++.|+... ...+.+.+ .. .+.++.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~-~~~~~l~~-------------~~-------~~~~~~~ 59 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP-TALAELKA-------------IN-------PKVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH-HHHHHHHH-------------HC-------TTSEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH-HHHHHHHH-------------hC-------CCceEEE
Confidence 57899999999999999999999999953 26778887642 12222221 10 1247889
Q ss_pred EeccCCCC-CCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc--c-C---CceEEEEec
Q 015874 90 VPGDISSE-DLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC--V-K---LKVFVHVST 162 (399)
Q Consensus 90 ~~gDl~~~-~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~--~-~---~~~~v~~SS 162 (399)
+.+|++++ +......+...+.+.++|+|||+||... .+.++..+++|+.++.++++++.+. + + ..+||++||
T Consensus 60 ~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 138 (254)
T 1sby_A 60 HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred EEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence 99999964 2211111111122347999999999753 4668889999999999999988753 1 1 357999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .....|+.+|...+.+.
T Consensus 139 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 162 (254)
T 1sby_A 139 VTGFNAI--------------------------------------------------------HQVPVYSASKAAVVSFT 162 (254)
T ss_dssp GGGTSCC--------------------------------------------------------TTSHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCchHHHHHHHHHHHHH
Confidence 8765421 11357999999999998
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.+ ..++++++++||.|.++.......+...... ..... ....+.+.+|+|++++.++.
T Consensus 163 ~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~~~------------~~~~~~~~~dvA~~i~~~~~ 226 (254)
T 1sby_A 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR----VAELL------------LSHPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT----HHHHH------------TTSCCEEHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHH----HHHHH------------hcCCCCCHHHHHHHHHHHHH
Confidence 876 2689999999999988643211111110000 00100 11234589999999999886
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
... . +.+|++.++
T Consensus 227 ~~~--~--G~~~~v~gG 239 (254)
T 1sby_A 227 ANK--N--GAIWKLDLG 239 (254)
T ss_dssp HCC--T--TCEEEEETT
T ss_pred cCC--C--CCEEEEeCC
Confidence 322 2 678999886
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.8e-19 Score=164.45 Aligned_cols=204 Identities=12% Similarity=0.129 Sum_probs=147.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| ++|.++.|+.. . .++.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~-~--------------------------------~~~~~~~ 45 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRRE-G--------------------------------EDLIYVE 45 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCC-S--------------------------------SSSEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEccCcc-c--------------------------------cceEEEe
Confidence 6899999999999999999999999 56688888764 2 3567899
Q ss_pred ccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCcc-------c----cHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKFD-------E----RYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~~-------~----~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
+|++++ +.+.++++ ++|+|||+||..... + .++..+++|+.++.++++++.+. ..
T Consensus 46 ~D~~~~-------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 46 GDVTRE-------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp CCTTCH-------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCCH-------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999953 33334333 799999999975321 1 67888999999999999988764 11
Q ss_pred --------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 015874 154 --------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (399)
Q Consensus 154 --------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (399)
..+||++||...+...
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~-------------------------------------------------------- 142 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 142 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred cCCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------
Confidence 1289999999776532
Q ss_pred CCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcccc
Q 015874 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (399)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
.+...|+.+|...+.+++.. ..+++++++|||.|+++..... .. .+......+ .+ + ..
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~------~~~~~~~~~-~~-~------~~ 205 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PE------KAKASLAAQ-VP-F------PP 205 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CH------HHHHHHHTT-CC-S------SC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---ch------hHHHHHHhh-CC-C------cc
Confidence 12357999999999988765 3489999999999998653211 00 111111111 11 0 03
Q ss_pred CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 301 ~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+++.+|+|++++.++.. ... .++.|++.++
T Consensus 206 ~~~~~~dva~~~~~l~~~-~~~--~G~~~~v~gG 236 (242)
T 1uay_A 206 RLGRPEEYAALVLHILEN-PML--NGEVVRLDGA 236 (242)
T ss_dssp SCCCHHHHHHHHHHHHHC-TTC--CSCEEEESTT
T ss_pred cCCCHHHHHHHHHHHhcC-CCC--CCcEEEEcCC
Confidence 478999999999999874 222 2789999887
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.82 E-value=6.3e-20 Score=171.70 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=153.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+.+ ..+..
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 58 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERG---AKVIGTATSESGA---QAISDYL---------------------GDNGK 58 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------------------GGGEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------cccce
Confidence 3678999999999999999999999999 5568888865432 2222211 24567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..+||
T Consensus 59 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 138 (248)
T 3op4_A 59 GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 138 (248)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 89999996432111111121223479999999997542 2567888999999999999987652 3567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 139 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 162 (248)
T 3op4_A 139 NVGSVVGTMGN--------------------------------------------------------AGQANYAAAKAGV 162 (248)
T ss_dssp EECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcchhhcCCC--------------------------------------------------------CCChHHHHHHHHH
Confidence 99997654321 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..+++++.++||.|.++...... . ......... .....+.+.+|+|++++
T Consensus 163 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~------~~~~~~~~~---------~p~~r~~~p~dva~~v~ 224 (248)
T 3op4_A 163 IGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---D------EQRTATLAQ---------VPAGRLGDPREIASAVA 224 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---H------HHHHHHHHT---------CTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---H------HHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 8888765 45899999999999876542111 0 111111111 12345789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.++.+++.++
T Consensus 225 ~L~s~~~~-~itG~~i~vdgG 244 (248)
T 3op4_A 225 FLASPEAA-YITGETLHVNGG 244 (248)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCCccC-CccCcEEEECCC
Confidence 88864322 223789999887
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=170.85 Aligned_cols=228 Identities=16% Similarity=0.133 Sum_probs=151.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+||||||+|+||+++++.|+++|+ +|.+. .|+.... +...+++. ..+.++.
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~vv~~~~r~~~~~---~~~~~~~~------------------~~~~~~~ 57 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGY---NIVINYARSKKAA---LETAEEIE------------------KLGVKVL 57 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCHHHH---HHHHHHHH------------------TTTCCEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHH---HHHHHHHH------------------hcCCcEE
Confidence 3689999999999999999999999994 45665 5544322 22221110 0135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 58 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 137 (258)
T 3oid_A 58 VVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV 137 (258)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999996432111112222233578999999986432 2457788999999999999988653 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+... .....|+.||.+.
T Consensus 138 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 161 (258)
T 3oid_A 138 SISSLGSIRYL--------------------------------------------------------ENYTTVGVSKAAL 161 (258)
T ss_dssp EEEEGGGTSBC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECchhhCCCC--------------------------------------------------------CCcHHHHHHHHHH
Confidence 99998654321 2246799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..++++..++||.|.++...... ............ .....+.+.+|+|++++
T Consensus 162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~ 225 (258)
T 3oid_A 162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP-------NREDLLEDARQN---------TPAGRMVEIKDMVDTVE 225 (258)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT-------THHHHHHHHHHH---------CTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc-------cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9999876 35899999999999876442111 001111111111 12245788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... ..-.+..+++.++
T Consensus 226 ~L~s~~~-~~itG~~i~vdGG 245 (258)
T 3oid_A 226 FLVSSKA-DMIRGQTIIVDGG 245 (258)
T ss_dssp HHTSSTT-TTCCSCEEEESTT
T ss_pred HHhCccc-CCccCCEEEECCC
Confidence 9886322 2223789999887
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=172.86 Aligned_cols=230 Identities=16% Similarity=0.185 Sum_probs=153.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ +.++.
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 76 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNG---AYVVVADVNEDAA---VRVANEI---------------------GSKAF 76 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------------------CTTEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCceE
Confidence 4678999999999999999999999999 5668888865322 2222111 35788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 77 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 156 (277)
T 4dqx_A 77 GVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSII 156 (277)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99999996432111111222223479999999997532 2567888999999999999988653 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.||.+.
T Consensus 157 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 180 (277)
T 4dqx_A 157 NTTSYTATSAI--------------------------------------------------------ADRTAYVASKGAI 180 (277)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EECchhhCcCC--------------------------------------------------------CCChhHHHHHHHH
Confidence 99998755421 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++..++||.|.++.... ............... ........+.+.+|+|++++
T Consensus 181 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~r~~~pedvA~~v~ 248 (277)
T 4dqx_A 181 SSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK---IFAEAKDPAKLRSDF---------NARAVMDRMGTAEEIAEAML 248 (277)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHHTCSCHHHHHHHH---------HTTSTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh---hcccccchhHHHHHH---------HhcCcccCCcCHHHHHHHHH
Confidence 9998766 458999999999997743100 000000000000001 11122345778999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.|..+++.++
T Consensus 249 ~L~s~~~~-~itG~~i~vdGG 268 (277)
T 4dqx_A 249 FLASDRSR-FATGSILTVDGG 268 (277)
T ss_dssp HHHSGGGT-TCCSCEEEESSS
T ss_pred HHhCCccC-CCcCCEEEECCc
Confidence 98864332 223789999887
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=173.78 Aligned_cols=233 Identities=14% Similarity=0.069 Sum_probs=151.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||+++++.|+++| .+|.++.|+.+.. +...+++ .+ .+.++.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 74 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEGL---RTTLKEL---------RE---------AGVEAD 74 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceE
Confidence 3678999999999999999999999999 5668888875332 2211111 00 124688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-----cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-----VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-----~~~~~ 156 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ++..+
T Consensus 75 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~ 154 (277)
T 2rhc_B 75 GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGR 154 (277)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeE
Confidence 99999996432111111111223479999999997532 2457788999999999999987653 24579
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 155 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 178 (277)
T 2rhc_B 155 IVNIASTGGKQGV--------------------------------------------------------VHAAPYSASKH 178 (277)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEECccccccCC--------------------------------------------------------CCCccHHHHHH
Confidence 9999998643311 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcch-----HHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKT-----INTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
..+.+.+.+ ..++++++++||.|.++.... ....... ......... .......+++.+
T Consensus 179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~~~ 246 (277)
T 2rhc_B 179 GVVGFTKALGLELARTGITVNAVCPGFVETPMAAS---VREHYSDIWEVSTEEAFDRIT---------ARVPIGRYVQPS 246 (277)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH---HHHHHHHHHTCCHHHHHHHHH---------HHSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh---hhhhcccccccchHHHHHHHH---------hcCCCCCCcCHH
Confidence 999988866 358999999999998753210 0000000 000001000 001234588999
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|++++.++..... .-.+.++++.++
T Consensus 247 dvA~~v~~l~s~~~~-~~tG~~~~vdGG 273 (277)
T 2rhc_B 247 EVAEMVAYLIGPGAA-AVTAQALNVCGG 273 (277)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 999999998864322 122789999887
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=172.72 Aligned_cols=226 Identities=14% Similarity=0.110 Sum_probs=153.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||+++++.|+++| .+|.+..|+... ..+...+++ .. .+.++.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~ 81 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAG---AKVAVNYASSAG--AADEVVAAI---------AA---------AGGEAF 81 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 4678999999999999999999999999 556777775322 122222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 82 ~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 161 (269)
T 4dmm_A 82 AVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII 161 (269)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99999996432111111121223479999999997632 2567888999999999999987542 2567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 162 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 185 (269)
T 4dmm_A 162 NIASVVGEMGN--------------------------------------------------------PGQANYSAAKAGV 185 (269)
T ss_dssp EECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECchhhcCCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++++++||.|.++... . . ....... ......+...+|+|++++
T Consensus 186 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-------~---~--~~~~~~~---------~~p~~r~~~~~dvA~~v~ 244 (269)
T 4dmm_A 186 IGLTKTVAKELASRGITVNAVAPGFIATDMTS-------E---L--AAEKLLE---------VIPLGRYGEAAEVAGVVR 244 (269)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC-------H---H--HHHHHGG---------GCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCcEEEEEEECCCcCcccc-------c---c--cHHHHHh---------cCCCCCCCCHHHHHHHHH
Confidence 9888765 46899999999999876531 0 0 0011111 112345678999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++......--.|..+++.++
T Consensus 245 ~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 245 FLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp HHHHCGGGGGCCSCEEEESTT
T ss_pred HHhCCcccCCCcCCEEEECCC
Confidence 998742222222789999887
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=171.71 Aligned_cols=231 Identities=13% Similarity=0.021 Sum_probs=156.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ . .....++.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~--------~~~~~~~~ 63 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTADI---DACVADL---------D--------QLGSGKVI 63 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------H--------TTSSSCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------H--------hhCCCcEE
Confidence 4789999999999999999999999999 5668888875432 2222111 0 01125789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++|
T Consensus 64 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 143 (262)
T 3pk0_A 64 GVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVV 143 (262)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999996432111111122223489999999997532 2567888999999999999987764 2567999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... ......|+.+|...
T Consensus 144 ~isS~~~~~~~-------------------------------------------------------~~~~~~Y~asK~a~ 168 (262)
T 3pk0_A 144 LTSSITGPITG-------------------------------------------------------YPGWSHYGATKAAQ 168 (262)
T ss_dssp EECCSBTTTBC-------------------------------------------------------CTTCHHHHHHHHHH
T ss_pred EEechhhccCC-------------------------------------------------------CCCChhhHHHHHHH
Confidence 99997642100 02235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++++++||.|.++..... ........... . ....+...+|+|++++
T Consensus 169 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~----~-----p~~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 169 LGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARS----I-----PAGALGTPEDIGHLAA 230 (262)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTT----S-----TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhc----C-----CCCCCcCHHHHHHHHH
Confidence 9999876 3689999999999988643110 01112222211 1 1234678899999999
Q ss_pred HHHHhccCCCCCCcEEEecCCCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSSLR 336 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~~~ 336 (399)
.++..... .-.+..+++.++..
T Consensus 231 ~L~s~~~~-~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 231 FLATKEAG-YITGQAIAVDGGQV 252 (262)
T ss_dssp HHHSGGGT-TCCSCEEEESTTTT
T ss_pred HHhCcccc-CCcCCEEEECCCee
Confidence 98864322 22378999988743
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-20 Score=175.57 Aligned_cols=237 Identities=14% Similarity=0.072 Sum_probs=158.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ . ..+.++.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~-------------~-----~~~~~~~ 60 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREG---AKVVVTARNGNAL---AELTDEI-------------A-----GGGGEAA 60 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECCSCHHHH---HHHHHHH-------------T-----TTTCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH-------------H-----hcCCcEE
Confidence 4788999999999999999999999999 5568887765432 2222221 0 0136788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++
T Consensus 61 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 140 (280)
T 3tox_A 61 ALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSL 140 (280)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 99999996432111111111223479999999996521 2567888999999999999987653 245689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... ......|+.||.+
T Consensus 141 v~isS~~~~~~~-------------------------------------------------------~~~~~~Y~asKaa 165 (280)
T 3tox_A 141 TFTSSFVGHTAG-------------------------------------------------------FAGVAPYAASKAG 165 (280)
T ss_dssp EEECCSBTTTBC-------------------------------------------------------CTTCHHHHHHHHH
T ss_pred EEEcChhhCcCC-------------------------------------------------------CCCchhHHHHHHH
Confidence 999998765211 0223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCC-CCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.+.+ ..+++++.++||.|.++.... .+.... ........ ......+...+|+|++
T Consensus 166 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~---------~~p~~r~~~pedvA~~ 230 (280)
T 3tox_A 166 LIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP------ETRGFVEG---------LHALKRIARPEEIAEA 230 (280)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT------HHHHHHHT---------TSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH------HHHHHHhc---------cCccCCCcCHHHHHHH
Confidence 99998866 458999999999999875421 111000 01111111 1123457889999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCCCCCcccHH
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLV 342 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~ 342 (399)
++.++..... .-.|.++++.++ ..++..
T Consensus 231 v~~L~s~~a~-~itG~~i~vdGG--~~~~~~ 258 (280)
T 3tox_A 231 ALYLASDGAS-FVTGAALLADGG--ASVTKA 258 (280)
T ss_dssp HHHHHSGGGT-TCCSCEEEESTT--GGGCC-
T ss_pred HHHHhCcccc-CCcCcEEEECCC--cccccc
Confidence 9998874332 223789999998 444433
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=169.62 Aligned_cols=225 Identities=14% Similarity=0.122 Sum_probs=149.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||++++++|+++| ++|.++.|+... ..++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--------------------------------~~~~~ 49 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEG---SKVIDLSIHDPG--------------------------------EAKYD 49 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSCCC--------------------------------SCSSE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEecCccc--------------------------------CCceE
Confidence 3678999999999999999999999999 566888887643 14678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 50 ~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 129 (264)
T 2dtx_A 50 HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIV 129 (264)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 89999996432111111111223479999999997532 2467888999999999999988653 2457999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 130 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 153 (264)
T 2dtx_A 130 NISSVQASIIT--------------------------------------------------------KNASAYVTSKHAV 153 (264)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EECCchhccCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998765421 1235799999999
Q ss_pred HHHHHHh--h--CCCcEEEEecCceecCCCCCCCCc-c-cCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 239 EMLMQQS--K--ENLSLVIIRPTVVSGTYKEPFPGW-V-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~--~--~~~~~~i~Rp~~V~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
+.+.+.+ + ..+++++++||.|.++........ . ............... ......+++.+|+|+++
T Consensus 154 ~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~p~dvA~~v 224 (264)
T 2dtx_A 154 IGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH---------EHPMQRIGKPQEVASAV 224 (264)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH---------HSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHH
Confidence 9998866 1 129999999999876421000000 0 000000000011000 01124588999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 225 ~~l~s~~~~-~~tG~~i~vdGG 245 (264)
T 2dtx_A 225 AFLASREAS-FITGTCLYVDGG 245 (264)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCchhc-CCCCcEEEECCC
Confidence 998864322 222788998886
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=168.45 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=147.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+++|+|+||||+|+||+++++.|+++| ++|.+..|+. +.... .+.+ .+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~--~~~~----------------------~~~~ 55 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPEAEA--AIRN----------------------LGRR 55 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHHHHH--HHHH----------------------TTCC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCchhHHHH--HHHh----------------------cCCc
Confidence 34788999999999999999999999999 5668888876 32111 1110 1257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 56 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 135 (249)
T 2ew8_A 56 VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGR 135 (249)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeE
Confidence 8899999996432111111111224579999999997532 2457788999999999998885432 25689
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 136 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 159 (249)
T 2ew8_A 136 IINLTSTTYWLKI--------------------------------------------------------EAYTHYISTKA 159 (249)
T ss_dssp EEEECCGGGGSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCchhHHHHHH
Confidence 9999998765421 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.+ ..++++++++||.|.++.... ..... ...... ... .....+.+.+|+|++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-------~~~~~~-~~~------~~~~~~~~p~dva~~ 223 (249)
T 2ew8_A 160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA--SALSA-------MFDVLP-NML------QAIPRLQVPLDLTGA 223 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------CTT------SSSCSCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh--ccccc-------hhhHHH-Hhh------CccCCCCCHHHHHHH
Confidence 999998876 358999999999998865320 00000 000000 000 112347889999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.+..+++.++
T Consensus 224 ~~~l~s~~~~-~~tG~~~~vdGG 245 (249)
T 2ew8_A 224 AAFLASDDAS-FITGQTLAVDGG 245 (249)
T ss_dssp HHHHTSGGGT-TCCSCEEEESSS
T ss_pred HHHHcCcccC-CCCCcEEEECCC
Confidence 9998863222 222788999886
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=170.39 Aligned_cols=230 Identities=12% Similarity=0.092 Sum_probs=150.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||++++++|+++| .+|.++.|+.... .+...+.+ ...+.++.
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~~------------------~~~~~~~~ 60 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKG---YSVTVTYHSDTTA--METMKETY------------------KDVEERLQ 60 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHT------------------GGGGGGEE
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCC---CEEEEEcCCChHH--HHHHHHHH------------------HhcCCceE
Confidence 3457899999999999999999999999 5567777765321 12211111 01135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc--C-------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT--K-------FDERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~--~-------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++.+|+++++......+...+.+.++|+|||+||.. . ..+.++..+++|+.++.++++++.+. .+..+
T Consensus 61 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 140 (264)
T 3i4f_A 61 FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGR 140 (264)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCe
Confidence 999999964321111111112234799999999932 1 12457788999999999999988432 25678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||.+.++... ......|+.+|.
T Consensus 141 iv~iss~~~~~~~~------------------------------------------------------~~~~~~Y~asKa 166 (264)
T 3i4f_A 141 IINYGFQGADSAPG------------------------------------------------------WIYRSAFAAAKV 166 (264)
T ss_dssp EEEECCTTGGGCCC------------------------------------------------------CTTCHHHHHHHH
T ss_pred EEEEeechhcccCC------------------------------------------------------CCCCchhHHHHH
Confidence 99999885543211 122367999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+.+ ..++++++++||.|.++..... . .. .... .........+.+.+|+|++
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~------~~-~~~~--------~~~~~p~~r~~~~~dva~~ 228 (264)
T 3i4f_A 167 GLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---I------QE-ARQL--------KEHNTPIGRSGTGEDIART 228 (264)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---H------HH-HHHC----------------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---c------HH-HHHH--------HhhcCCCCCCcCHHHHHHH
Confidence 999998866 3689999999999998654211 0 01 1110 0111123456789999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.+.++++.++
T Consensus 229 v~~l~s~~~~-~itG~~i~vdGG 250 (264)
T 3i4f_A 229 ISFLCEDDSD-MITGTIIEVTGA 250 (264)
T ss_dssp HHHHHSGGGT-TCCSCEEEESCS
T ss_pred HHHHcCcccC-CCCCcEEEEcCc
Confidence 9999874332 223789999887
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=171.88 Aligned_cols=228 Identities=12% Similarity=0.127 Sum_probs=153.3
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.++||+||||||+|+||+++++.|+++| .+|.+..|+.... ...
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~ 54 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYG---AKVVSVSLDEKSD-------------------------------VNV 54 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCC--C-------------------------------TTS
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhc-------------------------------cCc
Confidence 456889999999999999999999999999 5668888876432 135
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 55 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 134 (269)
T 3vtz_A 55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGS 134 (269)
T ss_dssp SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence 6778999996432111111222223479999999997542 2457788999999999999987652 25679
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.||.
T Consensus 135 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 158 (269)
T 3vtz_A 135 IINIASVQSYAAT--------------------------------------------------------KNAAAYVTSKH 158 (269)
T ss_dssp EEEECCGGGTSBC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCChhHHHHHH
Confidence 9999998766532 12357999999
Q ss_pred HHHHHHHHh----hCCCcEEEEecCceecCCCCCCCC--cccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 237 MGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPG--WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 237 ~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+.+.+.+.+ ..++++..++||.|.++....... ................ .......+.+.+|+|+
T Consensus 159 a~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~ 229 (269)
T 3vtz_A 159 ALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWG---------RQHPMGRIGRPEEVAE 229 (269)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHH---------HHSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHH---------hcCCCCCCcCHHHHHH
Confidence 999999876 238999999999998753210000 0000000001111111 1112345788999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.+.++++.++
T Consensus 230 ~v~~L~s~~~~-~itG~~i~vdGG 252 (269)
T 3vtz_A 230 VVAFLASDRSS-FITGACLTVDGG 252 (269)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHhCCccC-CCcCcEEEECCC
Confidence 99998874332 223789999987
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.6e-20 Score=175.17 Aligned_cols=231 Identities=15% Similarity=0.135 Sum_probs=154.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||+++++.|+++| .+|.+..|+.... ..+.+.+.+ .. .+.++.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~-~~~~~~~~~----------~~--------~~~~~~ 103 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREG---ADVAINYLPAEEE-DAQQVKALI----------EE--------CGRKAV 103 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCGGGHH-HHHHHHHHH----------HH--------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchh-HHHHHHHHH----------HH--------cCCcEE
Confidence 4688999999999999999999999999 4557776763221 112222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 104 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp ECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 99999996432111112222233579999999997431 2567888999999999999999874 23358999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 184 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 207 (294)
T 3r3s_A 184 TSSIQAYQPS--------------------------------------------------------PHLLDYAATKAAIL 207 (294)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ECChhhccCC--------------------------------------------------------CCchHHHHHHHHHH
Confidence 9998766532 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.+ ..|++++.++||.|.++...... .... .... .........+...+|+|++++.
T Consensus 208 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~--------------~~~~-~~~~~p~~r~~~p~dvA~~v~~ 271 (294)
T 3r3s_A 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQD--------------KIPQ-FGQQTPMKRAGQPAELAPVYVY 271 (294)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT-SCGG--------------GSTT-TTTTSTTSSCBCGGGGHHHHHH
T ss_pred HHHHHHHHHHhhcCeEEEEEecCcCccccccccC-CCHH--------------HHHH-HHhcCCCCCCcCHHHHHHHHHH
Confidence 998866 45899999999999885420000 0000 0000 1111223456788999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+.++++.++
T Consensus 272 L~s~~~~-~itG~~i~vdGG 290 (294)
T 3r3s_A 272 LASQESS-YVTAEVHGVCGG 290 (294)
T ss_dssp HHSGGGT-TCCSCEEEESTT
T ss_pred HhCcccc-CCCCCEEEECCC
Confidence 8864322 223789999887
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=174.99 Aligned_cols=223 Identities=14% Similarity=0.049 Sum_probs=142.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.||+||||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ .. .+.++
T Consensus 27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~ 82 (301)
T 3tjr_A 27 SGFDGRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQPAL---EQAVNGL---------RG---------QGFDA 82 (301)
T ss_dssp CCSTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCE
T ss_pred hccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hh---------cCCce
Confidence 34788999999999999999999999999 5668888875432 2222111 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..+
T Consensus 83 ~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~ 162 (301)
T 3tjr_A 83 HGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGH 162 (301)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred EEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 999999996432111111111223479999999997532 2567788999999999999987652 12 568
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.||.
T Consensus 163 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 186 (301)
T 3tjr_A 163 IAFTASFAGLVPN--------------------------------------------------------AGLGTYGVAKY 186 (301)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEeCchhhcCCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998655321 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+.+ ..|+++++++||.|.++.... ...... ........+....+.......+++.+|+|++
T Consensus 187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~ 258 (301)
T 3tjr_A 187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN-------SERIRG-ADYGMSATPEGAFGPLPTQDESVSADDVARL 258 (301)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH-------HHHHC-----------------------CCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCccccccccc-------cccccc-hhhccccChhhhccccccccCCCCHHHHHHH
Confidence 999888765 458999999999987643210 000000 0000000011111222345678999999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++..
T Consensus 259 i~~~l~~ 265 (301)
T 3tjr_A 259 TADAILA 265 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999985
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=171.29 Aligned_cols=228 Identities=15% Similarity=0.122 Sum_probs=145.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
..+|+||||||+|+||++++++|+++|+ +|.+.. |+.+. .+.+.+.+ .+ .+.++.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~---~V~~~~~~~~~~---~~~~~~~~---------~~---------~~~~~~ 79 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGW---RVGVNYAANREA---ADAVVAAI---------TE---------SGGEAV 79 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHH---HHHHHHHH---------HH---------TTCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCChhH---HHHHHHHH---------Hh---------cCCcEE
Confidence 4578999999999999999999999995 455553 33322 22222211 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-c-----CC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-V-----KL 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~-----~~ 154 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. . +.
T Consensus 80 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 159 (272)
T 4e3z_A 80 AIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG 159 (272)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred EEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence 99999996432111111122223479999999997642 2457788999999999999887653 1 34
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+.... .....|+.+
T Consensus 160 g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~as 184 (272)
T 4e3z_A 160 GAIVNVSSMAAILGSA-------------------------------------------------------TQYVDYAAS 184 (272)
T ss_dssp EEEEEECCTHHHHCCT-------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEEcchHhccCCC-------------------------------------------------------CCcchhHHH
Confidence 6799999986544211 113469999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+++.+ ..++++++++||.|.++..... ... ....... .......+.+.+|+|
T Consensus 185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~------~~~~~~~---------~~~~~~~~~~~edvA 247 (272)
T 4e3z_A 185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLP------DRAREMA---------PSVPMQRAGMPEEVA 247 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------CCTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CCh------HHHHHHh---------hcCCcCCCcCHHHHH
Confidence 99999988766 3489999999999988654210 000 0011111 111233466799999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.+.+|++.++
T Consensus 248 ~~i~~l~s~~~~~-~tG~~i~vdgG 271 (272)
T 4e3z_A 248 DAILYLLSPSASY-VTGSILNVSGG 271 (272)
T ss_dssp HHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHhCCcccc-ccCCEEeecCC
Confidence 9999998643322 22789999876
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=170.51 Aligned_cols=230 Identities=11% Similarity=0.075 Sum_probs=153.4
Q ss_pred HhhcCCcEEEEecCcch--hHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 7 VEFLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~--IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
...++||+|+||||+|+ ||+++++.|+++| .+|.+..|+....+..+.+.+. .
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~----------------------~ 80 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAG---AELAFTYQGDALKKRVEPLAEE----------------------L 80 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTT---CEEEEEECSHHHHHHHHHHHHH----------------------H
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHh----------------------c
Confidence 34588999999999988 9999999999999 5567888874322222222211 1
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-c
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-V 152 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~ 152 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 160 (293)
T 3grk_A 81 GAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA 160 (293)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 467899999996442111111221223479999999997531 2567788999999999999998764 3
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 161 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 184 (293)
T 3grk_A 161 DGGSILTLTYYGAEKVM--------------------------------------------------------PNYNVMG 184 (293)
T ss_dssp TCEEEEEEECGGGTSBC--------------------------------------------------------TTTTHHH
T ss_pred CCCEEEEEeehhhccCC--------------------------------------------------------CchHHHH
Confidence 45689999998655421 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.||.+.+.+.+.+ ..|+++..++||.|.++...... ............ .....+...+|
T Consensus 185 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~ped 248 (293)
T 3grk_A 185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-------DFRYILKWNEYN---------APLRRTVTIDE 248 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-------CHHHHHHHHHHH---------STTSSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-------chHHHHHHHHhc---------CCCCCCCCHHH
Confidence 9999999998866 45899999999999886542111 011111111111 01234677899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++..... .-.+..+++.++
T Consensus 249 vA~~v~~L~s~~~~-~itG~~i~vdGG 274 (293)
T 3grk_A 249 VGDVGLYFLSDLSR-SVTGEVHHADSG 274 (293)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCcccc-CCcceEEEECCC
Confidence 99999998874332 223789999887
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=178.68 Aligned_cols=249 Identities=13% Similarity=0.123 Sum_probs=164.3
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-------CcccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-------DIDSAALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
+..+.||+||||||+|+||.++++.|+++| .+|.+..|+. ......+...+++.+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------------- 83 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEITA--------------- 83 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH---------------
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHHHh---------------
Confidence 345788999999999999999999999999 5667877761 111223333222210
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
.+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++...
T Consensus 84 ---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 160 (322)
T 3qlj_A 84 ---AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW 160 (322)
T ss_dssp ---TTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 13578899999996432111111111223479999999997642 2567888999999999999987653
Q ss_pred c--C------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 152 V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 152 ~--~------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
. + ..+||++||...+...
T Consensus 161 ~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------------------------------ 186 (322)
T 3qlj_A 161 RGLSKAGKAVDGRIINTSSGAGLQGS------------------------------------------------------ 186 (322)
T ss_dssp HHHHHTTCCCCEEEEEECCHHHHHCB------------------------------------------------------
T ss_pred HHccccCCCCCcEEEEEcCHHHccCC------------------------------------------------------
Confidence 1 0 1489999998655421
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
.....|+.||.+.+.+.+.+ ..|++++.++|| +..+.... +... .......
T Consensus 187 --~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~------------------~~~~~~~ 242 (322)
T 3qlj_A 187 --VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAE------------------MMATQDQ 242 (322)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC-------------------------
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh---hhhh------------------hhhcccc
Confidence 12357999999999998866 368999999999 65433211 1110 0001112
Q ss_pred ccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCC---------------cccHHHHHHHHHHhhccC
Q 015874 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN---------------PVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 299 ~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~---------------~~s~~el~~~l~~~~~~~ 355 (399)
.+.++..+|+|++++.++...... -.+..+++.++... ..++.|+++.+.+.++..
T Consensus 243 ~~~~~~pedva~~v~~L~s~~~~~-itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 243 DFDAMAPENVSPLVVWLGSAEARD-VTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp -CCTTCGGGTHHHHHHHTSGGGGG-CCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred ccCCCCHHHHHHHHHHHhCccccC-CCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 334567899999999988643221 12788998887211 136799999999999864
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=170.65 Aligned_cols=230 Identities=16% Similarity=0.105 Sum_probs=156.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+||||||+|+||+++++.|+++| .+|.+..|+.+... ...+++ .+. .+.++.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~l---------~~~--------~~~~~~ 73 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAG---ARLVLSGRDVSELD---AARRAL---------GEQ--------FGTDVH 73 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHHHHH---------HHH--------HCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------HHh--------cCCcEE
Confidence 4788999999999999999999999999 56688888654322 222111 000 136789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+ ..+|
T Consensus 74 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 153 (266)
T 4egf_A 74 TVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI 153 (266)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 99999997653222222222334589999999997642 2557788999999999999987653 12 4689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 154 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a 177 (266)
T 4egf_A 154 ITVASAAALAPL--------------------------------------------------------PDHYAYCTSKAG 177 (266)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEcchhhccCC--------------------------------------------------------CCChHHHHHHHH
Confidence 999998755421 223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..++++..++||.|.++..... ... ......... ......+...+|+|+++
T Consensus 178 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~----~~~~~~~~~---------~~p~~r~~~p~dva~~v 241 (266)
T 4egf_A 178 LVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV---WGD----EAKSAPMIA---------RIPLGRFAVPHEVSDAV 241 (266)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH---TCS----HHHHHHHHT---------TCTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh---ccC----hHHHHHHHh---------cCCCCCCcCHHHHHHHH
Confidence 99988766 4589999999999987532100 000 011111111 11223567899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 242 ~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 4egf_A 242 VWLASDAAS-MINGVDIPVDGG 262 (266)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCchhc-CccCcEEEECCC
Confidence 998864322 223789999887
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=168.07 Aligned_cols=228 Identities=15% Similarity=0.084 Sum_probs=150.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+.+. .+...+++ +.++.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------------------~~~~~ 55 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEAA---GQQLAAEL---------------------GERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHHH---------------------CTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHc---------------------CCceE
Confidence 4678999999999999999999999999 556888776432 22222111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+.+++.+. .+ .+||
T Consensus 56 ~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv 134 (253)
T 1hxh_A 56 FVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSII 134 (253)
T ss_dssp EECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEE
Confidence 99999996432111111111223468999999997532 2567888999999998888766542 24 7999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 135 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 158 (253)
T 1hxh_A 135 NMASVSSWLPI--------------------------------------------------------EQYAGYSASKAAV 158 (253)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EEcchhhcCCC--------------------------------------------------------CCCccHHHHHHHH
Confidence 99998765421 1135799999999
Q ss_pred HHHHHHh-----hC--CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-----KE--NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-----~~--~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+ .. +++++++|||.|+++..... ..... .......... ......+.+.+|+|++
T Consensus 159 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~------~~~~~~~~~~-----~~p~~~~~~~~dvA~~ 225 (253)
T 1hxh_A 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LPKGV------SKEMVLHDPK-----LNRAGRAYMPERIAQL 225 (253)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SCTTC------CHHHHBCBTT-----TBTTCCEECHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc--cchhh------hHHHHhhhhc-----cCccCCCCCHHHHHHH
Confidence 9998876 23 89999999999998543110 00000 0000000000 1112357899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++...... -.+..+++.++
T Consensus 226 ~~~l~s~~~~~-~tG~~~~vdgG 247 (253)
T 1hxh_A 226 VLFLASDESSV-MSGSELHADNS 247 (253)
T ss_dssp HHHHHSGGGTT-CCSCEEEESSS
T ss_pred HHHHcCccccC-CCCcEEEECCC
Confidence 99988643222 22788998886
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=175.90 Aligned_cols=230 Identities=14% Similarity=0.087 Sum_probs=153.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.||+||||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ .. .+.++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~ 77 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAG---ARILINGTDPSRV---AQTVQEF---------RN---------VGHDA 77 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHHH---HHHHHHH---------HH---------TTCCE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCce
Confidence 45789999999999999999999999999 5567777765332 2222211 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 78 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 157 (271)
T 4ibo_A 78 EAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKI 157 (271)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 899999996432111111111223479999999997532 2567888999999999998887653 245689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 158 V~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 181 (271)
T 4ibo_A 158 VNIGSLTSELAR--------------------------------------------------------ATVAPYTVAKGG 181 (271)
T ss_dssp EEECCGGGTSBC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEccHHhCCCC--------------------------------------------------------CCchhHHHHHHH
Confidence 999997643321 224579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..|+++..++||.|.++.... +... ..+....... .....+...+|+|+++
T Consensus 182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~----~~~~~~~~~~---------~p~~r~~~pedva~~v 245 (271)
T 4ibo_A 182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQA---LIDN----PEFDAWVKAR---------TPAKRWGKPQELVGTA 245 (271)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHHC----HHHHHHHHHH---------STTCSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhh---cccC----HHHHHHHHhc---------CCCCCCcCHHHHHHHH
Confidence 99998866 468999999999998854310 0000 0111111111 1123467789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.|..+++.++
T Consensus 246 ~~L~s~~~~-~itG~~i~vdGG 266 (271)
T 4ibo_A 246 VFLSASASD-YVNGQIIYVDGG 266 (271)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCcccc-CCCCcEEEECCC
Confidence 998864332 223789999887
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-19 Score=167.34 Aligned_cols=230 Identities=12% Similarity=0.081 Sum_probs=155.9
Q ss_pred hcCCcEEEEecCcch--hHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG~--IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.++||+|+||||+|+ ||.+++++|+++| .+|.+..|+.......+.+.+ +. ...+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~~-------~~~~ 60 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERLEKSVHELAG-------------TL-------DRND 60 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHH-------------TS-------SSCC
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHHH-------------hc-------CCCC
Confidence 478899999999988 9999999999999 556888887533322222221 11 1237
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++.+|+++++......+...+.+.++|++||+||.... .+.+...+++|+.++.++++++.+. .+.
T Consensus 61 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 140 (266)
T 3oig_A 61 SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG 140 (266)
T ss_dssp CEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred ceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC
Confidence 8999999997543221122222233479999999997531 2456778999999999999998874 234
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.|
T Consensus 141 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 164 (266)
T 3oig_A 141 GSIVTLTYLGGELVM--------------------------------------------------------PNYNVMGVA 164 (266)
T ss_dssp EEEEEEECGGGTSCC--------------------------------------------------------TTTHHHHHH
T ss_pred ceEEEEecccccccC--------------------------------------------------------CCcchhHHH
Confidence 689999998654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+.+.. ..|++++.++||.|.++...... ............ . ....+.+.+|+|
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~----~-----~~~~~~~p~dva 228 (266)
T 3oig_A 165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-------DFNSILKDIEER----A-----PLRRTTTPEEVG 228 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-------THHHHHHHHHHH----S-----TTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-------chHHHHHHHHhc----C-----CCCCCCCHHHHH
Confidence 99999998766 45899999999999885542211 111112221111 0 123467889999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++...... -.+..+++.++
T Consensus 229 ~~v~~l~s~~~~~-~tG~~i~vdGG 252 (266)
T 3oig_A 229 DTAAFLFSDMSRG-ITGENLHVDSG 252 (266)
T ss_dssp HHHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHHcCCchhc-CcCCEEEECCC
Confidence 9999998743322 23789999887
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=170.56 Aligned_cols=227 Identities=12% Similarity=0.054 Sum_probs=153.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||++++++|+++| .+|.+..|+.. .+...+++. ..+.++.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~----~~~~~~~~~------------------~~~~~~~ 82 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAG---AHVLAWGRTDG----VKEVADEIA------------------DGGGSAE 82 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTH----HHHHHHHHH------------------TTTCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCHHH----HHHHHHHHH------------------hcCCcEE
Confidence 4678999999999999999999999999 45677776532 222221110 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+.. ....++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 83 ~~~~Dv~d~~~v~~~~~~~-~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV 161 (273)
T 3uf0_A 83 AVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIV 161 (273)
T ss_dssp EEECCTTCHHHHHHHHHHH-HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHH-HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999654211111111 122479999999997642 2567888999999999999987542 2567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 162 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 185 (273)
T 3uf0_A 162 TIASMLSFQGG--------------------------------------------------------RNVAAYAASKHAV 185 (273)
T ss_dssp EECCGGGTSCC--------------------------------------------------------SSCHHHHHHHHHH
T ss_pred EEcchHhcCCC--------------------------------------------------------CCChhHHHHHHHH
Confidence 99998755421 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++..++||.|.++.... +... .......... .....+...+|+|++++
T Consensus 186 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~----~~~~~~~~~~---------~p~~r~~~pedva~~v~ 249 (273)
T 3uf0_A 186 VGLTRALASEWAGRGVGVNALAPGYVVTANTAA---LRAD----DERAAEITAR---------IPAGRWATPEDMVGPAV 249 (273)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTS----HHHHHHHHHH---------STTSSCBCGGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh---cccC----HHHHHHHHhc---------CCCCCCCCHHHHHHHHH
Confidence 9998876 368999999999998865311 0000 0111111111 11235678899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.|..+++.++
T Consensus 250 ~L~s~~a~-~itG~~i~vdGG 269 (273)
T 3uf0_A 250 FLASDAAS-YVHGQVLAVDGG 269 (273)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCchhc-CCcCCEEEECcC
Confidence 98874322 223789999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=172.33 Aligned_cols=232 Identities=9% Similarity=0.084 Sum_probs=146.3
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|+..+.+|+||||||+|+||+++++.|+++| .+|.++.|+... ..+...+++. ..+.
T Consensus 23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~~~------------------~~~~ 79 (280)
T 4da9_A 23 MMTQKARPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDAE--GVAPVIAELS------------------GLGA 79 (280)
T ss_dssp CCSCCCCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCHH--HHHHHHHHHH------------------HTTC
T ss_pred hhhccCCCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCHH--HHHHHHHHHH------------------hcCC
Confidence 3445678999999999999999999999999 556777764321 1222222110 0135
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC---------ccccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK---------FDERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~---------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
++.++++|+++++......+...+.+.++|++||+||... ..+.++..+++|+.++.++++++.+. .+
T Consensus 80 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 159 (280)
T 4da9_A 80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD 159 (280)
T ss_dssp CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC
Confidence 7899999999755322222222223348999999999732 13567788999999999999887653 12
Q ss_pred ---CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 154 ---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 154 ---~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
..+||++||...+... .....
T Consensus 160 ~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~ 183 (280)
T 4da9_A 160 ARASRSIINITSVSAVMTS--------------------------------------------------------PERLD 183 (280)
T ss_dssp CCCCEEEEEECCC---------------------------------------------------------------CCHH
T ss_pred CCCCCEEEEEcchhhccCC--------------------------------------------------------CCccH
Confidence 4589999998655421 12357
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.+|.+.+.+.+.+ ..++++..++||.|.++...... .. .... +.........+...
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~------~~~~--------~~~~~~p~~r~~~p 246 (280)
T 4da9_A 184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GK------YDGL--------IESGLVPMRRWGEP 246 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------CCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hh------HHHH--------HhhcCCCcCCcCCH
Confidence 999999999998866 36899999999999886542110 00 0000 00001123456789
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|++++.++.... ..-.+..+++.++
T Consensus 247 edvA~~v~~L~s~~~-~~itG~~i~vdGG 274 (280)
T 4da9_A 247 EDIGNIVAGLAGGQF-GFATGSVIQADGG 274 (280)
T ss_dssp HHHHHHHHHHHTSTT-GGGTTCEEEESTT
T ss_pred HHHHHHHHHHhCccc-cCCCCCEEEECCC
Confidence 999999999886322 1122789999887
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=168.24 Aligned_cols=226 Identities=16% Similarity=0.192 Sum_probs=149.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR-AADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++|+|+||||+|+||++++++|+++| ++|.+..| +.+. .+...+++ .. .+.++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~---------~~---------~~~~~~ 57 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQG---ANVVVNYAGNEQK---ANEVVDEI---------KK---------LGSDAI 57 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH---HHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 578999999999999999999999999 55688888 3322 12222111 00 125688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 58 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 137 (246)
T 2uvd_A 58 AVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIV 137 (246)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99999996432111111111223479999999997532 2457788999999988888776542 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 138 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 161 (246)
T 2uvd_A 138 NIASVVGVTGN--------------------------------------------------------PGQANYVAAKAGV 161 (246)
T ss_dssp EECCTHHHHCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EECCHHhcCCC--------------------------------------------------------CCCchHHHHHHHH
Confidence 99998654321 1135799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..++++++++||.|.++..... ... ........ . ....+++.+|+|++++
T Consensus 162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~------~~~~~~~~----~-----p~~~~~~~~dvA~~~~ 223 (246)
T 2uvd_A 162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDVL---DEN------IKAEMLKL----I-----PAAQFGEAQDIANAVT 223 (246)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC---CTT------HHHHHHHT----C-----TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc---CHH------HHHHHHhc----C-----CCCCCcCHHHHHHHHH
Confidence 9887755 4589999999999987643211 111 01111110 1 1234789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 224 ~l~s~~~~-~~tG~~~~vdgG 243 (246)
T 2uvd_A 224 FFASDQSK-YITGQTLNVDGG 243 (246)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCchhc-CCCCCEEEECcC
Confidence 98863322 112678998876
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.4e-20 Score=173.89 Aligned_cols=231 Identities=12% Similarity=0.089 Sum_probs=153.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ +.++.
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 78 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEG---CHVLCADIDGDAA---DAAATKI---------------------GCGAA 78 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------------------CSSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHc---------------------CCcce
Confidence 5789999999999999999999999999 5668888865332 2221111 35788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..+||
T Consensus 79 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv 158 (277)
T 3gvc_A 79 ACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIV 158 (277)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999996432111112222233479999999997542 3567888999999999999987653 3557899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 159 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 182 (277)
T 3gvc_A 159 NLSSLAGQVAV--------------------------------------------------------GGTGAYGMSKAGI 182 (277)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EEcchhhccCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++++++||.|.++........... ... ........ ......+...+|+|++++
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~------~~~---~~~~~~~~--~~~~~r~~~pedvA~~v~ 251 (277)
T 3gvc_A 183 IQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG------ALG---AGGARSMI--ARLQGRMAAPEEMAGIVV 251 (277)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------------CCHHHHH--HHHHSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh------hHH---HHhhhhhh--hccccCCCCHHHHHHHHH
Confidence 9998865 4689999999999988542100000000 000 00000000 011235778999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 252 ~L~s~~a~-~itG~~i~vdGG 271 (277)
T 3gvc_A 252 FLLSDDAS-MITGTTQIADGG 271 (277)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCCccC-CccCcEEEECCc
Confidence 99864332 223789999887
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=171.23 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=150.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.||+||||||+|+||+++++.|+++| .+|.+..|+.... ...
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~--------------------------------~~~ 68 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAG---ARVAVADRAVAGI--------------------------------AAD 68 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECSSCCTTS--------------------------------CCS
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH--------------------------------Hhh
Confidence 34788999999999999999999999999 5568877775432 122
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
..+.+|+++.+......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 69 ~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 148 (266)
T 3uxy_A 69 LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAI 148 (266)
T ss_dssp EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 345789996432111111122233579999999997642 3567888999999999999988432 256799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.||.+
T Consensus 149 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 172 (266)
T 3uxy_A 149 VNVASCWGLRPG--------------------------------------------------------PGHALYCLTKAA 172 (266)
T ss_dssp EEECCSBTTBCC--------------------------------------------------------TTBHHHHHHHHH
T ss_pred EEECCHHhCCCC--------------------------------------------------------CCChHHHHHHHH
Confidence 999998655321 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..|+++++++||.|.++..... +.............. ........+.+.+|+|+++
T Consensus 173 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedvA~~v 241 (266)
T 3uxy_A 173 LASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKRGFDPDRAVAEL---------GRTVPLGRIAEPEDIADVV 241 (266)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHTTCCHHHHHHHH---------HTTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcccccchHHHHHH---------HhcCCCCCCcCHHHHHHHH
Confidence 99998866 4589999999999987532100 000000000011111 1112345678999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 242 ~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3uxy_A 242 LFLASDAAR-YLCGSLVEVNGG 262 (266)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCchhc-CCcCCEEEECcC
Confidence 998874322 222789999887
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=171.46 Aligned_cols=225 Identities=13% Similarity=0.105 Sum_probs=149.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ +.++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~ 75 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQG---AIVGLHGTREDKL---KEIAADL---------------------GKDV 75 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------CSSE
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCce
Confidence 34788999999999999999999999999 5567777764322 2221111 3578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 76 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~I 155 (266)
T 3grp_A 76 FVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRI 155 (266)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 999999996432111111121223479999999997532 2567888999999988888776542 256799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 156 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 179 (266)
T 3grp_A 156 INITSIVGVVGN--------------------------------------------------------PGQTNYCAAKAG 179 (266)
T ss_dssp EEECCC---------------------------------------------------------------CHHHHHHHHHH
T ss_pred EEECCHHHcCCC--------------------------------------------------------CCchhHHHHHHH
Confidence 999998654321 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..++++.+++||.|.++..... . ......... ......+...+|+|+++
T Consensus 180 ~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~------~~~~~~~~~---------~~p~~r~~~~edvA~~v 241 (266)
T 3grp_A 180 LIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---N------EKQKEAIMA---------MIPMKRMGIGEEIAFAT 241 (266)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---C------HHHHHHHHT---------TCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---C------HHHHHHHHh---------cCCCCCCcCHHHHHHHH
Confidence 99888765 4589999999999987543110 0 011111111 11234567899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 242 ~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3grp_A 242 VYLASDEAA-YLTGQTLHINGG 262 (266)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCcccc-CccCCEEEECCC
Confidence 998864332 223789999887
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=170.39 Aligned_cols=228 Identities=12% Similarity=0.055 Sum_probs=154.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||++++++|+++| .+|.+..|+.+..+ ...+++. ..+.++.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~---~~~~~~~------------------~~~~~~~ 84 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAG---AQVAVAARHSDALQ---VVADEIA------------------GVGGKAL 84 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGH---HHHHHHH------------------HTTCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHHH------------------hcCCeEE
Confidence 4788999999999999999999999999 56788888765432 2222210 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++ ..++
T Consensus 85 ~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~i 164 (276)
T 3r1i_A 85 PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTI 164 (276)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 99999996432111111111223479999999997642 2567788999999999999987653 12 3679
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... ......|+.||.+
T Consensus 165 v~isS~~~~~~~~------------------------------------------------------~~~~~~Y~asKaa 190 (276)
T 3r1i_A 165 ITTASMSGHIINI------------------------------------------------------PQQVSHYCTSKAA 190 (276)
T ss_dssp EEECCGGGTSCCC------------------------------------------------------SSCCHHHHHHHHH
T ss_pred EEECchHhcccCC------------------------------------------------------CCCcchHHHHHHH
Confidence 9999986443210 0123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..+++++.++||.|.++...... ......... .....+...+|+|+++
T Consensus 191 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~----------~~~~~~~~~---------~p~~r~~~pedvA~~v 251 (276)
T 3r1i_A 191 VVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA----------DYHALWEPK---------IPLGRMGRPEELTGLY 251 (276)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG----------GGHHHHGGG---------STTSSCBCGGGSHHHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch----------HHHHHHHhc---------CCCCCCcCHHHHHHHH
Confidence 99998876 36899999999999886542211 011111110 1123467789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 252 ~fL~s~~~~-~itG~~i~vdGG 272 (276)
T 3r1i_A 252 LYLASAASS-YMTGSDIVIDGG 272 (276)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHcCcccc-CccCcEEEECcC
Confidence 998874332 223789999887
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=168.05 Aligned_cols=229 Identities=14% Similarity=0.107 Sum_probs=152.3
Q ss_pred hcCCcEEEEecCcc-hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTG-FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG-~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+++|+|+||||+| .||++++++|+++| .+|.+..|+.... +...+++ . .....++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~--------~~~~~~~ 75 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERRL---GETRDQL---------A--------DLGLGRV 75 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------H--------TTCSSCE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHHH---HHHHHHH---------H--------hcCCCce
Confidence 47889999999998 59999999999999 5568888875432 2222211 0 1123589
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 76 ~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 155 (266)
T 3o38_A 76 EAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGV 155 (266)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 999999996442111111122223478999999997532 2467788999999999999988764 14568
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 156 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sKa 179 (266)
T 3o38_A 156 IVNNASVLGWRAQ--------------------------------------------------------HSQSHYAAAKA 179 (266)
T ss_dssp EEEECCGGGTCCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEeCCHHHcCCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999998654321 22457999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+.+ ..++++..++||.|.++...... .. ..... .........+.+.+|+|++
T Consensus 180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-----~~~~~---------~~~~~~~~r~~~~~dva~~ 242 (266)
T 3o38_A 180 GVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS---SS-----ELLDR---------LASDEAFGRAAEPWEVAAT 242 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC---cH-----HHHHH---------HHhcCCcCCCCCHHHHHHH
Confidence 999998866 46899999999999876531100 00 00000 1111234567899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.|+++++.++
T Consensus 243 i~~l~s~~~~-~~tG~~i~vdgG 264 (266)
T 3o38_A 243 IAFLASDYSS-YMTGEVVSVSSQ 264 (266)
T ss_dssp HHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHcCcccc-CccCCEEEEcCC
Confidence 9998874322 223789999886
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.4e-19 Score=166.90 Aligned_cols=243 Identities=14% Similarity=0.058 Sum_probs=155.9
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC----------cccHHHHHHHHHhhhhhHHHHHhh
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD----------IDSAALRFQNEVLAKDVFNVLKEK 74 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~----------~~~~~~~~~~~l~~~~~~~~~~~~ 74 (399)
+|...++||+|+||||+|+||.++++.|+++| .+|.+..|... .....+...+.+ .
T Consensus 4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 69 (277)
T 3tsc_A 4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEG---ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV---------E-- 69 (277)
T ss_dssp ---CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHH---------H--
T ss_pred ccccccCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeccccccccccccccCHHHHHHHHHHH---------H--
Confidence 45567899999999999999999999999999 55688877422 111222222111 0
Q ss_pred hcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHH
Q 015874 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNF 147 (399)
Q Consensus 75 ~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~ 147 (399)
..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.+++++
T Consensus 70 -------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 142 (277)
T 3tsc_A 70 -------AANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMA 142 (277)
T ss_dssp -------HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -------hcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHH
Confidence 013578999999996442111111122223579999999997642 256788899999999999998
Q ss_pred HHhc----cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 148 AKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 148 a~~~----~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
+.+. ....+||++||...+...
T Consensus 143 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 168 (277)
T 3tsc_A 143 GAPRIIEGGRGGSIILISSAAGMKMQ------------------------------------------------------ 168 (277)
T ss_dssp HHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCCEEEEEccHhhCCCC------------------------------------------------------
Confidence 7653 124689999998755421
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcC-ccccccCCCc
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQG-NLRCLVGETK 297 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 297 (399)
.....|+.||.+.+.+.+.+ ..++++..++||.|.++.... ............. ..........
T Consensus 169 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
T 3tsc_A 169 --PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTPFL 238 (277)
T ss_dssp --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCCSS
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhhcc
Confidence 12357999999999998866 458999999999998754310 0000111111010 1111111111
Q ss_pred cccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 298 ~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
. ..+.+.+|+|++++.++..... .-.+..+++.++
T Consensus 239 p-~r~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 273 (277)
T 3tsc_A 239 P-DWVAEPEDIADTVCWLASDESR-KVTAAQIPVDQG 273 (277)
T ss_dssp S-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred C-CCCCCHHHHHHHHHHHhCcccc-CCcCCEEeeCCC
Confidence 1 2488999999999998864332 223789999887
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=169.49 Aligned_cols=228 Identities=14% Similarity=0.099 Sum_probs=152.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+|+||||+|+||++++++|+++| .+|.+..|+.... .+.+.+.+ . ..+.++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~--~~~~~~~~---------~---------~~~~~~~ 82 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMG---LKVWINYRSNAEV--ADALKNEL---------E---------EKGYKAA 82 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------H---------HTTCCEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCHHH--HHHHHHHH---------H---------hcCCceE
Confidence 3678999999999999999999999999 5668888864321 12222111 0 0135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+...++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 83 ~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 162 (271)
T 4iin_A 83 VIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVV 162 (271)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence 99999996432111111111223479999999997642 2567888999999999998887653 2557899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 163 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 186 (271)
T 4iin_A 163 NVASIIGERGN--------------------------------------------------------MGQTNYSASKGGM 186 (271)
T ss_dssp EECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEechhhcCCC--------------------------------------------------------CCchHhHHHHHHH
Confidence 99998654321 2246799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..++++..++||.|.++...... . ..... .........+.+.+|+|++++
T Consensus 187 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~------~~~~~---------~~~~~~~~~~~~p~dvA~~i~ 248 (271)
T 4iin_A 187 IAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---D------ELKAD---------YVKNIPLNRLGSAKEVAEAVA 248 (271)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---H------HHHHH---------HHhcCCcCCCcCHHHHHHHHH
Confidence 9998866 36899999999999876432110 0 00000 111122345789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.|..+++.++
T Consensus 249 ~l~s~~~~-~itG~~i~vdGG 268 (271)
T 4iin_A 249 FLLSDHSS-YITGETLKVNGG 268 (271)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCCCcC-CCcCCEEEeCCC
Confidence 98874332 223789999887
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.8e-19 Score=164.08 Aligned_cols=224 Identities=13% Similarity=0.061 Sum_probs=148.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.+..|+.+.. +...+ +. +.++.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~~--------~~~~~ 54 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEEG---AATAR-------------EL--------GDAAR 54 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-------------TT--------GGGEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------Hh--------CCcee
Confidence 4678999999999999999999999999 5668888865321 11111 10 24688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++.+.+. .+..+||
T Consensus 55 ~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 134 (254)
T 1hdc_A 55 YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134 (254)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 89999996432111111111123479999999997532 2467788999999998776655432 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 135 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 158 (254)
T 1hdc_A 135 NISSAAGLMGL--------------------------------------------------------ALTSSYGASKWGV 158 (254)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECchhhccCC--------------------------------------------------------CCchhHHHHHHHH
Confidence 99998755421 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCee-eHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI-PVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~Dva~~i 312 (399)
+.+.+.+ ..+++++++|||.|.++.... ........+.. ......+. +.+|+|+++
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~~~-~~p~~~~~~~~~dvA~~v 220 (254)
T 1hdc_A 159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-----------------TGIRQGEGNYP-NTPMGRVGNEPGEIAGAV 220 (254)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----------------HTCCCSTTSCT-TSTTSSCB-CHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCeEEEEEecccCcCccccc-----------------cchhHHHHHHh-cCCCCCCCCCHHHHHHHH
Confidence 9988766 458999999999998853210 00000000100 01122366 899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 221 ~~l~s~~~~-~~tG~~~~vdgG 241 (254)
T 1hdc_A 221 VKLLSDTSS-YVTGAELAVDGG 241 (254)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCchhc-CCCCCEEEECCC
Confidence 998864322 122788999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-19 Score=168.23 Aligned_cols=238 Identities=14% Similarity=0.101 Sum_probs=149.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||+++++.|+++| .+|.+..|+.+. ..+...+++ ... .+.++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~~---------~~~--------~~~~~~~ 59 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA--EIEKVRAGL---------AAQ--------HGVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH--HHHHHHHHH---------HHH--------HTSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCcch--HHHHHHHHH---------Hhc--------cCCcEEE
Confidence 578999999999999999999999999 556888887543 022222211 000 0246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 60 ~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (260)
T 1x1t_A 60 DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999996432111111111223479999999997532 2467888999999999999888652 25679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 140 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 163 (260)
T 1x1t_A 140 IASAHGLVAS--------------------------------------------------------ANKSAYVAAKHGVV 163 (260)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ECcHHhCcCC--------------------------------------------------------CCCchHHHHHHHHH
Confidence 9998655421 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+ ..++++++++||.|.++..... ........ .......... ........+.+.+|+|+++
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~p~dva~~~ 235 (260)
T 1x1t_A 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL--------SEKQPSLQFVTPEQLGGTA 235 (260)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH--------HHHCTTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHh--------hccCCCCCCcCHHHHHHHH
Confidence 998765 3589999999999988654211 00000000 0000000000 0001124578999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+++.++
T Consensus 236 ~~l~s~~~~-~~tG~~~~vdgG 256 (260)
T 1x1t_A 236 VFLASDAAA-QITGTTVSVDGG 256 (260)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhChhhc-CCCCCEEEECCC
Confidence 998864322 122788999886
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=163.43 Aligned_cols=216 Identities=12% Similarity=0.116 Sum_probs=149.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+...... ..+++ ..++.
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~---~~~~~---------------------~~~~~ 61 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGEA---QAKKL---------------------GNNCV 61 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHHH---HHHHH---------------------CTTEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcHhHHH---HHHHh---------------------CCceE
Confidence 4678999999999999999999999999 567888898754322 11111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------------cccHHHHHHHhHHHHHHHHHHH
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFA 148 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------------~~~~~~~~~~n~~~~~~ll~~a 148 (399)
++.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++
T Consensus 62 ~~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 134 (265)
T 2o23_A 62 FAPADVTSE-------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLV 134 (265)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999964 3333333 389999999997532 2356778999999999999988
Q ss_pred Hhc---c------CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 015874 149 KKC---V------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (399)
Q Consensus 149 ~~~---~------~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (399)
.+. . +..+||++||...+...
T Consensus 135 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------------------------------------------- 164 (265)
T 2o23_A 135 AGEMGQNEPDQGGQRGVIINTASVAAFEGQ-------------------------------------------------- 164 (265)
T ss_dssp HHHHTTSCCCTTSCCEEEEEECCTHHHHCC--------------------------------------------------
T ss_pred HHHHHhcccccCCCCcEEEEeCChhhcCCC--------------------------------------------------
Confidence 764 1 35689999998765421
Q ss_pred cccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccC
Q 015874 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (399)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
.....|+.+|.+.+.+.+.+ ..++++++++||.|.++.....+ .. ....... ..+.
T Consensus 165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~------~~~~~~~----~~~~ 225 (265)
T 2o23_A 165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EK------VCNFLAS----QVPF 225 (265)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHH----TCSS
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC---HH------HHHHHHH----cCCC
Confidence 12357999999999888765 35899999999999876432110 00 0000000 0110
Q ss_pred CCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 295 ~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...+++.+|+|++++.++.. ... .++.+++.++
T Consensus 226 ----~~~~~~~~dva~~~~~l~~~-~~~--~G~~i~vdgG 258 (265)
T 2o23_A 226 ----PSRLGDPAEYAHLVQAIIEN-PFL--NGEVIRLDGA 258 (265)
T ss_dssp ----SCSCBCHHHHHHHHHHHHHC-TTC--CSCEEEESTT
T ss_pred ----cCCCCCHHHHHHHHHHHhhc-Ccc--CceEEEECCC
Confidence 13468899999999998863 222 2678999887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=167.25 Aligned_cols=218 Identities=13% Similarity=0.087 Sum_probs=144.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||+++++.|+++|+ +|.+..|+.+.. .+.+.+ .++.
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~--~~~~~~------------------------~~~~ 74 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH---RVIISYRTEHAS--VTELRQ------------------------AGAV 74 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESSCCHH--HHHHHH------------------------HTCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH--HHHHHh------------------------cCCe
Confidence 36789999999999999999999999994 568888887543 111111 2478
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 75 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 154 (260)
T 3gem_A 75 ALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVH 154 (260)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 89999996432111111111223479999999997532 2456778999999999999988653 24578999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 155 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 178 (260)
T 3gem_A 155 ISDDVTRKGS--------------------------------------------------------SKHIAYCATKAGLE 178 (260)
T ss_dssp ECCGGGGTCC--------------------------------------------------------SSCHHHHHHHHHHH
T ss_pred ECChhhcCCC--------------------------------------------------------CCcHhHHHHHHHHH
Confidence 9998655421 12357999999999
Q ss_pred HHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 240 MLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 240 ~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
.+.+.+ ..++++..++||.|.++.... . ......... ....-+...+|+|++++.+
T Consensus 179 ~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~----------~~~~~~~~~---------~p~~r~~~~edva~~v~~L 238 (260)
T 3gem_A 179 SLTLSFAARFAPLVKVNGIAPALLMFQPKDD-A----------AYRANALAK---------SALGIEPGAEVIYQSLRYL 238 (260)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECTTCC-----------------------------------CCSCCCCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEeecccccCCCCC-H----------HHHHHHHhc---------CCCCCCCCHHHHHHHHHHH
Confidence 998866 346999999999998754311 0 001111110 0112345679999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+. .... .+..+++.++
T Consensus 239 ~~-~~~i--tG~~i~vdGG 254 (260)
T 3gem_A 239 LD-STYV--TGTTLTVNGG 254 (260)
T ss_dssp HH-CSSC--CSCEEEESTT
T ss_pred hh-CCCC--CCCEEEECCC
Confidence 84 2222 2789999988
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=171.29 Aligned_cols=237 Identities=14% Similarity=0.095 Sum_probs=151.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+-+.+|+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ .. .+.++
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~ 75 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDAKNV---SAAVDGL---------RA---------AGHDV 75 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HT---------TTCCE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcE
Confidence 34678999999999999999999999999 5668888875432 2222111 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh---c--cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK---C--VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~---~--~~~~ 155 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+ + .+..
T Consensus 76 ~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g 155 (279)
T 3sju_A 76 DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG 155 (279)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc
Confidence 999999996432111111122223479999999997542 245778899999999999998765 1 2457
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 156 ~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 179 (279)
T 3sju_A 156 RIVNIASTGGKQGV--------------------------------------------------------MYAAPYTASK 179 (279)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECChhhccCC--------------------------------------------------------CCChhHHHHH
Confidence 89999998654321 2235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCC-CcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
...+.+.+.+ ..|+++..++||.|.++...... .+..... .......... .......+...+|+
T Consensus 180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedv 250 (279)
T 3sju_A 180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN---------AKIPLGRYSTPEEV 250 (279)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH---------TTCTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH---------hcCCCCCCCCHHHH
Confidence 9999988766 46899999999999875321000 0000000 0011111111 11123457889999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.|..+++.++
T Consensus 251 A~~v~~L~s~~a~-~itG~~i~vdGG 275 (279)
T 3sju_A 251 AGLVGYLVTDAAA-SITAQALNVCGG 275 (279)
T ss_dssp HHHHHHHTSSGGG-GCCSCEEEESTT
T ss_pred HHHHHHHhCcccc-CcCCcEEEECCC
Confidence 9999988863322 122789999887
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.3e-20 Score=169.03 Aligned_cols=224 Identities=13% Similarity=0.133 Sum_probs=144.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE-
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF- 89 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~- 89 (399)
+|+|+||||+|+||++++++|+++| ++|.++ .|+.+.. +...+++ .. .+.++.+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G---~~v~~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~~ 56 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDG---FALAIHYGQNREKA---EEVAEEA---------RR---------RGSPLVAV 56 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESSCHHHH---HHHHHHH---------HH---------TTCSCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHHH---HHHHHHH---------Hh---------cCCceEEE
Confidence 4789999999999999999999999 455776 5654322 2221111 00 1235666
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+.++||+
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T 2ph3_A 57 LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVN 136 (245)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 8999996432111111111123579999999997532 2456778999999977777665432 25789999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 137 ~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 160 (245)
T 2ph3_A 137 ITSVVGILGN--------------------------------------------------------PGQANYVASKAGLI 160 (245)
T ss_dssp ECCTHHHHCC--------------------------------------------------------SSBHHHHHHHHHHH
T ss_pred EeChhhccCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9998543321 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.+ ..+++++++|||.++++...... .........+ . ....+++++|+|++++.
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~ 222 (245)
T 2ph3_A 161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---------QEVKEAYLKQ----I-----PAGRFGRPEEVAEAVAF 222 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHHT----C-----TTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---------HHHHHHHHhc----C-----CCCCCcCHHHHHHHHHH
Confidence 888765 34899999999999885431100 0111111111 0 12457899999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.++.|++.++
T Consensus 223 l~~~~~~-~~~G~~~~v~gg 241 (245)
T 2ph3_A 223 LVSEKAG-YITGQTLCVDGG 241 (245)
T ss_dssp HTSGGGT-TCCSCEEEESTT
T ss_pred HhCcccc-cccCCEEEECCC
Confidence 8864322 112689999886
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-19 Score=168.86 Aligned_cols=230 Identities=13% Similarity=0.021 Sum_probs=155.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+||||||+|+||+++++.|+++| .+|.+..|+.+.... ..+++ ......++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~---~~~~l-----------------~~~~~~~~ 93 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAG---ANVAVAARSPRELSS---VTAEL-----------------GELGAGNV 93 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGGGHH---HHHHH-----------------TTSSSSCE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHH---HHHHH-----------------HhhCCCcE
Confidence 34688999999999999999999999999 566888888654322 22221 01112578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 94 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 173 (293)
T 3rih_A 94 IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRV 173 (293)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 999999996442111112222234578999999997532 2567888999999999999987431 256899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... ......|+.||..
T Consensus 174 V~isS~~~~~~~-------------------------------------------------------~~~~~~Y~asKaa 198 (293)
T 3rih_A 174 ILTSSITGPVTG-------------------------------------------------------YPGWSHYGASKAA 198 (293)
T ss_dssp EEECCSBTTTBB-------------------------------------------------------CTTCHHHHHHHHH
T ss_pred EEEeChhhccCC-------------------------------------------------------CCCCHHHHHHHHH
Confidence 999998642100 0223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..|+++++++||.|+++..... ...+........ ....+...+|+|+++
T Consensus 199 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------p~~r~~~p~dvA~~v 260 (293)
T 3rih_A 199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---------GEEYISGMARSI---------PMGMLGSPVDIGHLA 260 (293)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---------CHHHHHHHHTTS---------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---------cHHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence 99998866 4689999999999998543110 011222222211 122356789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.|.++++.++
T Consensus 261 ~fL~s~~a~-~itG~~i~vdGG 281 (293)
T 3rih_A 261 AFLATDEAG-YITGQAIVVDGG 281 (293)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCcccc-CCCCCEEEECCC
Confidence 998864322 223789999887
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=167.28 Aligned_cols=228 Identities=13% Similarity=0.077 Sum_probs=155.8
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.||+|+||||+| +||+++++.|+++| .+|.+..|+.......+...+. ..+
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~----------------------~~~ 81 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQG---AEVALTYLSETFKKRVDPLAES----------------------LGV 81 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHH----------------------HTC
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHh----------------------cCC
Confidence 47789999999998 99999999999999 5668888875433232222211 134
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 82 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 161 (296)
T 3k31_A 82 KLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG 161 (296)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 6889999996443211122222223579999999997531 2567888999999999999998874 234
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||.+.+... .....|+.|
T Consensus 162 g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 185 (296)
T 3k31_A 162 GSILTLSYYGAEKVV--------------------------------------------------------PHYNVMGVC 185 (296)
T ss_dssp EEEEEEECGGGTSCC--------------------------------------------------------TTTTHHHHH
T ss_pred CEEEEEEehhhccCC--------------------------------------------------------CCchhhHHH
Confidence 689999998654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.+ ..+++++.++||.|.++..... ............. . ....+...+|+|
T Consensus 186 Kaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~----~-----p~~r~~~pedvA 249 (296)
T 3k31_A 186 KAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-------SDFHYILTWNKYN----S-----PLRRNTTLDDVG 249 (296)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-------HHHHHHHHHHHHH----S-----TTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-------cchHHHHHHHHhc----C-----CCCCCCCHHHHH
Confidence 99999998866 4589999999999998654211 1111111111111 1 123456789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.|.++++.++
T Consensus 250 ~~v~fL~s~~a~-~itG~~i~vdGG 273 (296)
T 3k31_A 250 GAALYLLSDLGR-GTTGETVHVDCG 273 (296)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCCccC-CccCCEEEECCC
Confidence 999999874322 223789999887
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-19 Score=167.36 Aligned_cols=228 Identities=14% Similarity=0.142 Sum_probs=155.0
Q ss_pred hhcCCcEEEEecCcch--hHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLENKTILVSGVTGF--VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~--IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..+++|+|+||||+|+ ||.++++.|+++| .+|.+..|+. .....+.+.+ . ..
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~-~~~~~~~l~~-------------~---------~~ 75 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREG---AELAFTYVGQ-FKDRVEKLCA-------------E---------FN 75 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTT---CEEEEEECTT-CHHHHHHHHG-------------G---------GC
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcC---CEEEEeeCch-HHHHHHHHHH-------------h---------cC
Confidence 4578899999999977 9999999999999 5678888876 2222222221 1 13
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
++.++.+|+++++......+...+.+.++|+|||+||.... .+.+...+++|+.++.++++++.+.
T Consensus 76 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 155 (280)
T 3nrc_A 76 PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK 155 (280)
T ss_dssp CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 57899999996543111112222223468999999997532 2456778999999999999998764
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
++..+||++||...+... .....|
T Consensus 156 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 179 (280)
T 3nrc_A 156 NRNASMVALTYIGAEKAM--------------------------------------------------------PSYNTM 179 (280)
T ss_dssp TTTCEEEEEECGGGTSCC--------------------------------------------------------TTTHHH
T ss_pred cCCCeEEEEeccccccCC--------------------------------------------------------CCchhh
Confidence 245789999998654421 223579
Q ss_pred hHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 232 ~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
+.+|.+.+.+.+.. ..++++.+++||.|.++...... ............ .....+...+
T Consensus 180 ~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~~~~~pe 243 (280)
T 3nrc_A 180 GVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-------NFKKMLDYNAMV---------SPLKKNVDIM 243 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-------THHHHHHHHHHH---------STTCSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-------chHHHHHHHHhc---------CCCCCCCCHH
Confidence 99999999998865 46899999999999886542111 111112211111 1123467889
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|++++.++..... .-.+.++++.++
T Consensus 244 dvA~~v~~l~s~~~~-~~tG~~i~vdgG 270 (280)
T 3nrc_A 244 EVGNTVAFLCSDMAT-GITGEVVHVDAG 270 (280)
T ss_dssp HHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccC-CcCCcEEEECCC
Confidence 999999998864322 122789999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=172.53 Aligned_cols=227 Identities=14% Similarity=0.117 Sum_probs=148.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ .+ .+.++.
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 96 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKSC---DSVVDEI---------KS---------FGYESS 96 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHHH---HHHHHHH---------HT---------TTCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcC---CEEEEEcCCHHHH---HHHHHHH---------Hh---------cCCcee
Confidence 3668999999999999999999999999 5567777654322 2222111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 97 ~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 176 (285)
T 2c07_A 97 GYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 176 (285)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 99999996432111111111122479999999997532 2467788999999999988887642 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 177 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 200 (285)
T 2c07_A 177 NISSIVGLTGN--------------------------------------------------------VGQANYSSSKAGV 200 (285)
T ss_dssp EECCTHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECChhhccCC--------------------------------------------------------CCCchHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..+++++++|||.|.++..... . .......... . ....+++.+|+|++++
T Consensus 201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~------~~~~~~~~~~----~-----~~~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---S------EQIKKNIISN----I-----PAGRMGTPEEVANLAC 262 (285)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---C------HHHHHHHHTT----C-----TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---C------HHHHHHHHhh----C-----CCCCCCCHHHHHHHHH
Confidence 9888765 3589999999999988653211 0 0111111111 1 1234789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++...... -.+..|++.++
T Consensus 263 ~l~~~~~~~-~~G~~i~v~gG 282 (285)
T 2c07_A 263 FLSSDKSGY-INGRVFVIDGG 282 (285)
T ss_dssp HHHSGGGTT-CCSCEEEESTT
T ss_pred HHhCCCcCC-CCCCEEEeCCC
Confidence 988643221 12688999876
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=164.14 Aligned_cols=232 Identities=15% Similarity=0.093 Sum_probs=150.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.+..|+.+.. +...+++ .. .+.++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 74 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKEL---DECLEIW---------RE---------KGLNVEG 74 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEE
Confidence 678999999999999999999999999 5668888875322 2221111 00 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+...+.+ .++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 75 ~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 154 (273)
T 1ae1_A 75 SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 154 (273)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999996432111111111223 679999999997532 2467788999999999999988542 2567999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 155 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 178 (273)
T 1ae1_A 155 FLSSIAGFSAL--------------------------------------------------------PSVSLYSASKGAI 178 (273)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcCHhhcCCC--------------------------------------------------------CCcchhHHHHHHH
Confidence 99998766532 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..++++++++||.|.++...... ................ . ....+.+.+|+|++++
T Consensus 179 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~----~-----p~~r~~~p~dvA~~v~ 246 (273)
T 1ae1_A 179 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVK----T-----PMGRAGKPQEVSALIA 246 (273)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHH----S-----TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhc----C-----CCCCCcCHHHHHHHHH
Confidence 9998766 35899999999999987542110 0000000111111110 1 1224788999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 247 ~l~s~~~~-~~tG~~i~vdGG 266 (273)
T 1ae1_A 247 FLCFPAAS-YITGQIIWADGG 266 (273)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCcccc-CcCCCEEEECCC
Confidence 88863322 222788999887
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-18 Score=160.88 Aligned_cols=226 Identities=13% Similarity=0.074 Sum_probs=141.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. ...+.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 50 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAG---AKVTGFDQAFTQE-------------------------------QYPFAT 50 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCCCSS-------------------------------CCSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCchhhh-------------------------------cCCceE
Confidence 678999999999999999999999999 5668888876421 012778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 51 ~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 130 (250)
T 2fwm_X 51 EVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVT 130 (250)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 8999996432111111111122379999999997532 2567888999999999999988432 25689999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|...+
T Consensus 131 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 154 (250)
T 2fwm_X 131 VASDAAHTPR--------------------------------------------------------IGMSAYGASKAALK 154 (250)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ECchhhCCCC--------------------------------------------------------CCCchHHHHHHHHH
Confidence 9998755421 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..++++++++||.|.++....... .. ......+..... . .........+.+.+|+|++++.
T Consensus 155 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~----~-~~~~~p~~~~~~p~dvA~~v~~ 226 (250)
T 2fwm_X 155 SLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SD-DAEEQRIRGFGE----Q-FKLGIPLGKIARPQEIANTILF 226 (250)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHhCccCCEEEEEECCcccCcccccccc--Ch-hHHHHHHhhhhh----c-ccccCCCCCCcCHHHHHHHHHH
Confidence 998876 358999999999999875421100 00 000000000000 0 0000112246889999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... -.+..+++.++
T Consensus 227 l~s~~~~~-~tG~~i~vdGG 245 (250)
T 2fwm_X 227 LASDLASH-ITLQDIVVDGG 245 (250)
T ss_dssp HHSGGGTT-CCSCEEEESTT
T ss_pred HhCccccC-CCCCEEEECCC
Confidence 88643222 22788999887
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=166.64 Aligned_cols=238 Identities=14% Similarity=0.065 Sum_probs=150.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .+. ..+.++
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-------~~~~~~ 66 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGL---EASKAAV---------LET-------APDAEV 66 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH-------CTTCCE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhh-------cCCceE
Confidence 34788999999999999999999999999 5668888875332 2222111 000 012578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++..+++++.+. .+..+
T Consensus 67 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 146 (267)
T 1iy8_A 67 LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGM 146 (267)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence 899999996432111111111223479999999997532 2457788999999999887766442 25689
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 147 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 170 (267)
T 1iy8_A 147 VVNTASVGGIRGI--------------------------------------------------------GNQSGYAAAKH 170 (267)
T ss_dssp EEEECCGGGTSBC--------------------------------------------------------SSBHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCccHHHHHH
Confidence 9999998654321 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.+ ..|+++++++||.|.++........... ............ ......+.+.+|+|++
T Consensus 171 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~---------~~p~~r~~~~~dvA~~ 240 (267)
T 1iy8_A 171 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQ---------VNPSKRYGEAPEIAAV 240 (267)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHT---------TCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccCh-hhhhhHHHHHhc---------cCCCCCCcCHHHHHHH
Confidence 999988765 4589999999999987532100000000 000000001111 0112347899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++...... -.+..+++.++
T Consensus 241 v~~l~s~~~~~-~tG~~i~vdGG 262 (267)
T 1iy8_A 241 VAFLLSDDASY-VNATVVPIDGG 262 (267)
T ss_dssp HHHHTSGGGTT-CCSCEEEESTT
T ss_pred HHHHcCccccC-CCCCEEEECCC
Confidence 99988633221 22788999887
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-19 Score=162.83 Aligned_cols=203 Identities=15% Similarity=0.154 Sum_probs=141.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCc----CeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNV----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V----~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+|+|+||||+|+||++++++|+++|+.- ..|.+..|+.... +.+.+++ . ..+.++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~---~~~~~~~---------~---------~~~~~~ 60 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL---EKISLEC---------R---------AEGALT 60 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH---HHHHHHH---------H---------TTTCEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH---HHHHHHH---------H---------ccCCee
Confidence 6899999999999999999999999510 0678888864322 2222211 0 013578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 61 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (244)
T 2bd0_A 61 DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHI 140 (244)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 899999996432111111111122379999999997532 2467788999999999999987542 256899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|.+
T Consensus 141 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a 164 (244)
T 2bd0_A 141 FFITSVAATKAF--------------------------------------------------------RHSSIYCMSKFG 164 (244)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEecchhcCCC--------------------------------------------------------CCCchhHHHHHH
Confidence 999998765421 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+++.+ ..+++++++|||.|+++...... . . . ...+++.+|+|+++
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~---------------~-------~--~~~~~~~~dva~~~ 217 (244)
T 2bd0_A 165 QRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---D---------------E-------M--QALMMMPEDIAAPV 217 (244)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---S---------------T-------T--GGGSBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc---c---------------c-------c--cccCCCHHHHHHHH
Confidence 99988654 45899999999999987542100 0 0 0 12578999999999
Q ss_pred HHHHHh
Q 015874 313 IVAMVA 318 (399)
Q Consensus 313 ~~~~~~ 318 (399)
+.++..
T Consensus 218 ~~l~~~ 223 (244)
T 2bd0_A 218 VQAYLQ 223 (244)
T ss_dssp HHHHTS
T ss_pred HHHHhC
Confidence 999963
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=167.57 Aligned_cols=226 Identities=15% Similarity=0.111 Sum_probs=152.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.++||+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ +.++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~ 54 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADG---ATVIVSDINAEGA---KAAAASI---------------------GKKA 54 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHHH---HHHHHHH---------------------CTTE
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh---------------------CCce
Confidence 35789999999999999999999999999 5567777765322 2221111 3578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ....+
T Consensus 55 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~ 134 (247)
T 3rwb_A 55 RAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGR 134 (247)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcE
Confidence 899999996442111112222223479999999997532 2567888999999999999985442 22578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 135 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 158 (247)
T 3rwb_A 135 VISIASNTFFAGT--------------------------------------------------------PNMAAYVAAKG 158 (247)
T ss_dssp EEEECCTHHHHTC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCchhhHHHHH
Confidence 9999998654421 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.. ..+++++.++||.|.++.....+ .. ....+... . .....+...+|+|++
T Consensus 159 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~--~~~~~~~~-~-----------~~~~r~~~pedva~~ 221 (247)
T 3rwb_A 159 GVIGFTRALATELGKYNITANAVTPGLIESDGVKASP---HN--EAFGFVEM-L-----------QAMKGKGQPEHIADV 221 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG---GG--GGHHHHHH-H-----------SSSCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC---hh--HHHHHHhc-c-----------cccCCCcCHHHHHHH
Confidence 999888766 46899999999999875331110 00 00000000 0 012335678999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+..++..... .-.+..+++.++
T Consensus 222 v~~L~s~~~~-~itG~~i~vdGG 243 (247)
T 3rwb_A 222 VSFLASDDAR-WITGQTLNVDAG 243 (247)
T ss_dssp HHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHhCcccc-CCCCCEEEECCC
Confidence 9998874332 223789999887
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=165.11 Aligned_cols=224 Identities=10% Similarity=0.024 Sum_probs=150.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+.++.... . + ..++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~----------------~-~---------~~~~~~ 54 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINESKLQEL----------------E-K---------YPGIQT 54 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHGGG----------------G-G---------STTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHH----------------H-h---------ccCceE
Confidence 678999999999999999999999999 5668888864321110 0 0 126888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++. .+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 55 ~~~D~~~~~~----~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 130 (246)
T 2ag5_A 55 RVLDVTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIIN 130 (246)
T ss_dssp EECCTTCHHH----HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEeeCCCHHH----HHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 9999996321 11111234579999999997542 2457788999999999999987642 25679999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+.... .....|+.+|...+
T Consensus 131 isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~a~~ 155 (246)
T 2ag5_A 131 MSSVASSVKGV-------------------------------------------------------VNRCVYSTTKAAVI 155 (246)
T ss_dssp ECCSBTTTBCC-------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred EechHhCcCCC-------------------------------------------------------CCCccHHHHHHHHH
Confidence 99986543210 02357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+++.+ ..+++++++|||.|+++..... +... ............. . ....+.+.+|+|++++.
T Consensus 156 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~-~~~~~~~~~~~~~----~-----~~~~~~~~~dvA~~v~~ 223 (246)
T 2ag5_A 156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER--IQAR-GNPEEARNDFLKR----Q-----KTGRFATAEEIAMLCVY 223 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH--HHHS-SSHHHHHHHHHHT----C-----TTSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhh--hhcc-cCcHHHHHHHHhc----C-----CCCCCCCHHHHHHHHHH
Confidence 998876 3589999999999998542100 0000 0000111111110 0 12247899999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.+..+++.++
T Consensus 224 l~s~~~~-~~tG~~i~vdgG 242 (246)
T 2ag5_A 224 LASDESA-YVTGNPVIIDGG 242 (246)
T ss_dssp HHSGGGT-TCCSCEEEECTT
T ss_pred HhCcccc-CCCCCEEEECCC
Confidence 8864322 122788998876
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-19 Score=169.96 Aligned_cols=235 Identities=11% Similarity=0.119 Sum_probs=152.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+++ ... .....+.++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~----~~~~~~~~~ 74 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERL---KSAADEL---------QAN----LPPTKQARV 74 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHT----SCTTCCCCE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhh----ccccCCccE
Confidence 35788999999999999999999999999 5668888875332 2221111 110 000123578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 75 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~i 154 (303)
T 1yxm_A 75 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 154 (303)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeE
Confidence 999999996432111111111122469999999996421 2456778999999999999998662 235789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||.+.++. .....|+.+|..
T Consensus 155 v~isS~~~~~~---------------------------------------------------------~~~~~Y~~sK~a 177 (303)
T 1yxm_A 155 VNIIVPTKAGF---------------------------------------------------------PLAVHSGAARAG 177 (303)
T ss_dssp EEECCCCTTCC---------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEEeecccCC---------------------------------------------------------CcchhhHHHHHH
Confidence 99999872211 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCC-CCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYK-EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.+.+ ..+++++++|||.|+|+.. .....+... .... +.. ......+.+.+|+|++
T Consensus 178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~------~~~~--------~~~-~~p~~~~~~~~dvA~~ 242 (303)
T 1yxm_A 178 VYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS------FFEG--------SFQ-KIPAKRIGVPEEVSSV 242 (303)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG------GGTT--------GGG-GSTTSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchH------HHHH--------HHh-cCcccCCCCHHHHHHH
Confidence 99888765 3489999999999999742 111100000 0000 000 0112347899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.+..+++.++
T Consensus 243 i~~l~~~~~~-~~~G~~~~v~gG 264 (303)
T 1yxm_A 243 VCFLLSPAAS-FITGQSVDVDGG 264 (303)
T ss_dssp HHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHhCcccc-cCCCcEEEECCC
Confidence 9998864322 122789999887
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=165.58 Aligned_cols=228 Identities=14% Similarity=0.097 Sum_probs=151.6
Q ss_pred hcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.+|+|+||||+ |+||+++++.|+++| ++|.++.|+.......+.+.+ . ..+
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~l~~-------------~---------~~~ 57 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIAQ-------------E---------LNS 57 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHHH-------------H---------TTC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHH-------------h---------cCC
Confidence 3678999999999 999999999999999 567888888642222222221 1 023
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 58 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 137 (275)
T 2pd4_A 58 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 137 (275)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred cEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 6789999996432111111111223478999999997532 2457788999999999999999874 223
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||.+.+... .....|+.+
T Consensus 138 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 161 (275)
T 2pd4_A 138 ASVLTLSYLGSTKYM--------------------------------------------------------AHYNVMGLA 161 (275)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEEecchhcCCC--------------------------------------------------------CCchhhHHH
Confidence 689999997543311 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+.+.+ ..|+++++++||.|.++...... ............. ....+.+.+|+|
T Consensus 162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~~~~~p~dva 225 (275)
T 2pd4_A 162 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-------DFRMILKWNEINA---------PLRKNVSLEEVG 225 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHS---------TTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-------ccHHHHHHHHhcC---------CcCCCCCHHHHH
Confidence 99999998866 35899999999999886542111 0111111111110 112356789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..+++.++
T Consensus 226 ~~~~~l~s~~~~-~~tG~~~~vdgg 249 (275)
T 2pd4_A 226 NAGMYLLSSLSS-GVSGEVHFVDAG 249 (275)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccc-CCCCCEEEECCC
Confidence 999998863222 122678888886
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=165.66 Aligned_cols=228 Identities=12% Similarity=0.103 Sum_probs=152.8
Q ss_pred CCcccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 1 ~~~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
|.+......++||+|+||||+|+||+++++.|+++| .+|.+..|+.+... ...+++ ...
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~------ 59 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYG---ATVILLGRNEEKLR---QVASHI---------NEE------ 59 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHHHHH---------HHH------
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------Hhh------
Confidence 555555567899999999999999999999999999 56688888754322 222111 000
Q ss_pred ccccCceEEEeccC--CCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 81 SFISEKITFVPGDI--SSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 81 ~~~~~~i~~~~gDl--~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
...++.++.+|+ ++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+
T Consensus 60 --~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 137 (252)
T 3f1l_A 60 --TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLP 137 (252)
T ss_dssp --HSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred --cCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 123778899999 64321111111111223479999999997421 245778899999999999998854
Q ss_pred c---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 151 ~---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
. .+..+||++||...+... ..
T Consensus 138 ~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 161 (252)
T 3f1l_A 138 LLLKSDAGSLVFTSSSVGRQGR--------------------------------------------------------AN 161 (252)
T ss_dssp HHHTSSSCEEEEECCGGGTSCC--------------------------------------------------------TT
T ss_pred HHHHCCCCEEEEECChhhccCC--------------------------------------------------------CC
Confidence 2 256789999998654321 12
Q ss_pred CchhhHhHHHHHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCee
Q 015874 228 PNTYVFTKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 303 (399)
...|+.+|...+.+.+.+ ...+++..+.||.|.++. ....... .....+.
T Consensus 162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-----------------~~~~~~~---------~~~~~~~ 215 (252)
T 3f1l_A 162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-----------------RASAFPT---------EDPQKLK 215 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-----------------HHHHCTT---------CCGGGSB
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-----------------hhhhCCc---------cchhccC
Confidence 357999999999998876 223899999999876522 1111110 0112356
Q ss_pred eHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 304 ~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..+|+|++++.++..... .-.+..+++.++
T Consensus 216 ~p~dva~~~~~L~s~~~~-~itG~~i~vdgG 245 (252)
T 3f1l_A 216 TPADIMPLYLWLMGDDSR-RKTGMTFDAQPG 245 (252)
T ss_dssp CTGGGHHHHHHHHSGGGT-TCCSCEEESSCC
T ss_pred CHHHHHHHHHHHcCcccc-CCCCCEEEeCCC
Confidence 788999999998874332 223789999888
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=167.81 Aligned_cols=251 Identities=16% Similarity=0.155 Sum_probs=157.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc---------cHHHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID---------SAALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
.++||+||||||+|+||++++++|+++| .+|.++.|+.... ...+....++ .
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~------- 67 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEG---ADIILFDICHDIETNEYPLATSRDLEEAGLEV---------E------- 67 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHH---------H-------
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcccccccccccchhhhHHHHHHHHHH---------H-------
Confidence 4789999999999999999999999999 5568888863221 1112211111 0
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 68 --~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 145 (287)
T 3pxx_A 68 --KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS 145 (287)
T ss_dssp --HTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred --hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc
Confidence 013688999999996432111111111223479999999998643 3567888999999999999999874 34
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++||...+..... .+..+.. +......|+.
T Consensus 146 ~g~iv~isS~~~~~~~~~----~~~~~~~-----------------------------------------~~~~~~~Y~a 180 (287)
T 3pxx_A 146 GASIITTGSVAGLIAAAQ----PPGAGGP-----------------------------------------QGPGGAGYSY 180 (287)
T ss_dssp TCEEEEECCHHHHHHHHC----CC----------------------------------------------CHHHHHHHHH
T ss_pred CcEEEEeccchhcccccc----ccccccc-----------------------------------------CCCccchHHH
Confidence 568999999876543210 0000000 0011246999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCC---cccC--cchHHHHHHHhhcCccccccCCCccccCee
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVED--LKTINTLFVASAQGNLRCLVGETKVIMDVI 303 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 303 (399)
+|.+.+.+.+.+ ..|+++..++||.|.++.....+. +... ......... ...........+.
T Consensus 181 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 252 (287)
T 3pxx_A 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALL--------AFPAMQAMPTPYV 252 (287)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH--------HGGGGCSSSCSCB
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHh--------hhhhhcccCCCCC
Confidence 999999998866 348999999999998875421000 0000 000000000 0001111125789
Q ss_pred eHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 304 ~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.+|+|++++.++..... .-.|..+++.++
T Consensus 253 ~p~dva~~v~fL~s~~a~-~itG~~i~vdGG 282 (287)
T 3pxx_A 253 EASDISNAVCFLASDESR-YVTGLQFKVDAG 282 (287)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHhhHheecchhhc-CCCCceEeECch
Confidence 999999999998864322 223789999887
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-19 Score=165.75 Aligned_cols=229 Identities=9% Similarity=0.069 Sum_probs=149.8
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec-CCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA-ADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
.+.+++|+||||||+|+||++++++|+++| .+|.+..|+ ...... ..+++ .. ...
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G---~~v~~~~~~~~~~~~~---~~~~~---------~~---------~~~ 63 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDG---FRVVAGCGPNSPRRVK---WLEDQ---------KA---------LGF 63 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTT---EEEEEEECTTCSSHHH---HHHHH---------HH---------TTC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHHHHHH---HHHHH---------Hh---------cCC
Confidence 356788999999999999999999999999 556777744 333211 11111 00 135
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..
T Consensus 64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 143 (256)
T 3ezl_A 64 DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG 143 (256)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 78899999996432111111121223479999999997642 2567888999999999998877542 2567
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 144 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 167 (256)
T 3ezl_A 144 RIINISSVNGQKGQ--------------------------------------------------------FGQTNYSTAK 167 (256)
T ss_dssp EEEEECCCCGGGSC--------------------------------------------------------SCCHHHHHHH
T ss_pred EEEEEcchhhccCC--------------------------------------------------------CCCcccHHHH
Confidence 89999998654421 2235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+++.+ ..++++.+++||.|.++..... . .......... .....+.+.+|+|+
T Consensus 168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~------~~~~~~~~~~---------~~~~~~~~~~dva~ 229 (256)
T 3ezl_A 168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---R------PDVLEKIVAT---------IPVRRLGSPDEIGS 229 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---C------HHHHHHHHHH---------STTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---C------HHHHHHHHhc---------CCCCCCcCHHHHHH
Confidence 9999888765 4589999999999977543110 0 1112221111 11234678999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.+..+++.++
T Consensus 230 ~~~~l~s~~~~-~~tG~~i~vdgG 252 (256)
T 3ezl_A 230 IVAWLASEESG-FSTGADFSLNGG 252 (256)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHhCCccc-CCcCcEEEECCC
Confidence 99998864322 223789999887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=165.81 Aligned_cols=240 Identities=13% Similarity=0.095 Sum_probs=153.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+||||||+|+||+++++.|+++| ++|.+..|+.... .+...+++ .. .+.++.
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--~~~~~~~~---------~~---------~~~~~~ 82 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTES--AEEVVAAI---------KK---------NGSDAA 82 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchHH--HHHHHHHH---------HH---------hCCCeE
Confidence 4678999999999999999999999999 5668888875321 11111111 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ++..+||++
T Consensus 83 ~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 83 CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99999996432111111111223579999999997642 2567888999999999999998774 355799999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+.... .....|+.+|...+.
T Consensus 163 sS~~~~~~~~-------------------------------------------------------~~~~~Y~asK~a~~~ 187 (283)
T 1g0o_A 163 GSITGQAKAV-------------------------------------------------------PKHAVYSGSKGAIET 187 (283)
T ss_dssp CCGGGTCSSC-------------------------------------------------------SSCHHHHHHHHHHHH
T ss_pred echhhccCCC-------------------------------------------------------CCCcchHHHHHHHHH
Confidence 9986433110 113579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+ ..|+++++++||.|.++..... ..+..... ............. ......+.+.+|+|++++
T Consensus 188 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~ 260 (283)
T 1g0o_A 188 FARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVC 260 (283)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHH
Confidence 98765 4589999999999987532100 00000000 0001111111100 011234688999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+.++++.++
T Consensus 261 ~l~s~~~~-~itG~~i~vdgG 280 (283)
T 1g0o_A 261 FLASNDGG-WVTGKVIGIDGG 280 (283)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCcccc-CcCCCEEEeCCC
Confidence 99864322 222788988876
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=163.85 Aligned_cols=232 Identities=12% Similarity=0.073 Sum_probs=149.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ ... ..+.++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-------~~~~~~~~ 62 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNG---ARLLLFSRNREKL---EAAASRI---------ASL-------VSGAQVDI 62 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH-------STTCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhc-------CCCCeEEE
Confidence 678999999999999999999999999 5668888865322 2222111 000 00137889
Q ss_pred EeccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
+.+|++++ +.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 63 ~~~D~~~~-------~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (260)
T 2z1n_A 63 VAGDIREP-------GDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135 (260)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999953 33333332 39999999996532 2467888999999998888876542 25
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+... .....|+.
T Consensus 136 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (260)
T 2z1n_A 136 WGRMVYIGSVTLLRPW--------------------------------------------------------QDLALSNI 159 (260)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECchhhcCCC--------------------------------------------------------CCCchhHH
Confidence 6899999998765421 11357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|...+.+.+.+ ..++++++++||.|.++.......-.........-. . ...+ ........+.+.+|+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~---~~~~-~~~~p~~r~~~~~dv 232 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE---A---LKSM-ASRIPMGRVGKPEEL 232 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------------CCTTSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH---H---HHHH-HhcCCCCCccCHHHH
Confidence 999999988765 458999999999999875421000000000000000 0 0000 000112347799999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+..+++.++
T Consensus 233 a~~v~~l~s~~~~-~~tG~~i~vdGG 257 (260)
T 2z1n_A 233 ASVVAFLASEKAS-FITGAVIPVDGG 257 (260)
T ss_dssp HHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 9999998864322 222788998876
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=169.52 Aligned_cols=230 Identities=15% Similarity=0.156 Sum_probs=149.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+||||||+|+||++++++|+++| .+|.+..|.......++...+++.+ .+.++.
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~------------------~~~~~~ 66 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALES---VNLVLHYHQAKDSDTANKLKDELED------------------QGAKVA 66 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSS---CEEEEEESCGGGHHHHHHHHHHHHT------------------TTCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecCccCHHHHHHHHHHHHh------------------cCCcEE
Confidence 4788999999999999999999999999 5567877765443334433332210 135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..++|++
T Consensus 67 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 67 LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp EEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 99999996443111112222223479999999997532 2567788999999999999998874 345689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|.+.+.
T Consensus 147 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~ 170 (262)
T 3ksu_A 147 ATSLLAAYT--------------------------------------------------------GFYSTYAGNKAPVEH 170 (262)
T ss_dssp CCCHHHHHH--------------------------------------------------------CCCCC-----CHHHH
T ss_pred echhhccCC--------------------------------------------------------CCCchhHHHHHHHHH
Confidence 998655421 123569999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.+ ..++++..++||.|.++..... ... ..............+...+|+|++++.+
T Consensus 171 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~--------------~~~~~~~~~~~~~r~~~pedvA~~v~~L 233 (262)
T 3ksu_A 171 YTRAASKELMKQQISVNAIAPGPMDTSFFYGQ---ETK--------------ESTAFHKSQAMGNQLTKIEDIAPIIKFL 233 (262)
T ss_dssp HHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC---C--------------------------CCCCSCCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---Cch--------------HHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence 98866 3589999999999866432100 000 0000001111223467789999999999
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.. . ..-.|..+++.++
T Consensus 234 ~s~-~-~~itG~~i~vdGg 250 (262)
T 3ksu_A 234 TTD-G-WWINGQTIFANGG 250 (262)
T ss_dssp HTT-T-TTCCSCEEEESTT
T ss_pred cCC-C-CCccCCEEEECCC
Confidence 874 2 2223789999887
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.4e-19 Score=158.88 Aligned_cols=183 Identities=15% Similarity=0.199 Sum_probs=135.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||++++++|+ +| ++|.++.|+.. ++.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~r~~~--------------------------------------~~~~ 41 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAGRHSG--------------------------------------DVTV 41 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEESSSS--------------------------------------SEEC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEecCcc--------------------------------------ceee
Confidence 589999999999999999999 89 56688888642 3578
Q ss_pred cCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
|+++ .+.+..+++ ++|+|||+||.... .+.+...+++|+.++.++++++.+. .+..+||++|
T Consensus 42 D~~~-------~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 114 (202)
T 3d7l_A 42 DITN-------IDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT 114 (202)
T ss_dssp CTTC-------HHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred ecCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence 9995 333334443 58999999996532 1445677899999999999998874 2236899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .....|+.+|...|.+
T Consensus 115 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 115 GIMMEDPI--------------------------------------------------------VQGASAAMANGAVTAF 138 (202)
T ss_dssp CGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred chhhcCCC--------------------------------------------------------CccHHHHHHHHHHHHH
Confidence 98654321 2235799999999999
Q ss_pred HHHh--h--CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 242 MQQS--K--ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 242 l~~~--~--~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
++.+ + .+++++++||+.++++... . ++....+++++++|+|++++.++.
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~---------~~~~~~~~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESWDK------------------L---------EPFFEGFLPVPAAKVARAFEKSVF 191 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGHHH------------------H---------GGGSTTCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCeEEEEEecCccCCchhh------------------h---------hhhccccCCCCHHHHHHHHHHhhh
Confidence 9887 2 3899999999999885320 0 011134678999999999988874
Q ss_pred hccCCCCCCcEEEe
Q 015874 318 AHAKQPSDANIYHV 331 (399)
Q Consensus 318 ~~~~~~~~~~~yni 331 (399)
.. .. +++||+
T Consensus 192 -~~-~~--G~~~~v 201 (202)
T 3d7l_A 192 -GA-QT--GESYQV 201 (202)
T ss_dssp -SC-CC--SCEEEE
T ss_pred -cc-cc--CceEec
Confidence 22 11 568886
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=164.96 Aligned_cols=244 Identities=15% Similarity=0.063 Sum_probs=156.8
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc-------------ccHHHHHHHHHhhhhhHHHH
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-------------DSAALRFQNEVLAKDVFNVL 71 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~-------------~~~~~~~~~~l~~~~~~~~~ 71 (399)
+|...+.||+|+||||+|+||.++++.|+++| .+|.++.|+... ...++...+.+
T Consensus 4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 71 (286)
T 3uve_A 4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV--------- 71 (286)
T ss_dssp --CCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHH---------
T ss_pred CCCcccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHHHHHHH---------
Confidence 35556889999999999999999999999999 566888886321 11222222111
Q ss_pred HhhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHH
Q 015874 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIH 143 (399)
Q Consensus 72 ~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ 143 (399)
. ..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.+
T Consensus 72 ----~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 142 (286)
T 3uve_A 72 ----K-----GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWK 142 (286)
T ss_dssp ----H-----TTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred ----h-----hcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHH
Confidence 0 013578999999996443111112222233479999999997532 25677889999999999
Q ss_pred HHHHHHhc----cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 015874 144 LVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (399)
Q Consensus 144 ll~~a~~~----~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (399)
+++++.+. ....+||++||...+...
T Consensus 143 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------- 172 (286)
T 3uve_A 143 TVKAGVPHMIAGGRGGSIILTSSVGGLKAY-------------------------------------------------- 172 (286)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------------------------------------------------
T ss_pred HHHHHHHHHHhCCCCcEEEEECchhhccCC--------------------------------------------------
Confidence 99987653 124689999998655421
Q ss_pred cccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCC---cccC--cchHHHHHHHhhcCcc
Q 015874 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVED--LKTINTLFVASAQGNL 289 (399)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~ 289 (399)
.....|+.+|...+.+.+.+ ..++++..++||.|.++....... +... ...... .....
T Consensus 173 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 241 (286)
T 3uve_A 173 ------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDD-MAPIC---- 241 (286)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHH-HHHHH----
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhh-HHHHH----
Confidence 22357999999999998866 468999999999998865421000 0000 000000 00000
Q ss_pred ccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 290 ~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.. ..... ..+.+.+|+|++++.++..... --.|..+++.++
T Consensus 242 -~~-~~~~p-~r~~~p~dvA~~v~fL~s~~a~-~itG~~i~vdGG 282 (286)
T 3uve_A 242 -QM-FHTLP-IPWVEPIDISNAVLFFASDEAR-YITGVTLPIDAG 282 (286)
T ss_dssp -HT-TCSSS-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -Hh-hhccC-CCcCCHHHHHHHHHHHcCcccc-CCcCCEEeECCc
Confidence 00 11111 4678999999999998864322 223789999887
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=169.31 Aligned_cols=225 Identities=17% Similarity=0.110 Sum_probs=138.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||.+++++|+++| ++|.+.+|+.++.. ...+++ ... ....++.
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~~~---~~~~~l---------~~~-------~~~~~~~ 62 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDSID---KALATL---------EAE-------GSGPEVM 62 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHHHHH---------HHH-------TCGGGEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHHHH---HHHHHH---------Hhc-------CCCCeEE
Confidence 3678999999999999999999999999 56788888764432 222111 000 0123789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhcc---------
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCV--------- 152 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~--------- 152 (399)
++.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.|+.++++++.+.-
T Consensus 63 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 142 (319)
T 3ioy_A 63 GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQ 142 (319)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCC
Confidence 99999996432111111111223478999999997532 25677889999999999999887641
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 143 ~~g~iV~isS~a~~~~~--------------------------------------------------------~~~~~Y~ 166 (319)
T 3ioy_A 143 KGGHVVNTASMAAFLAA--------------------------------------------------------GSPGIYN 166 (319)
T ss_dssp CCCEEEEECCGGGTCCC--------------------------------------------------------SSSHHHH
T ss_pred CCcEEEEecccccccCC--------------------------------------------------------CCCHHHH
Confidence 24579999998765532 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCC-CccccCeeeHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE-TKVIMDVIPVD 306 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~ 306 (399)
.||.+.+.+.+.+ ..|+++++++||.|.++......... ..+.............. .......++.+
T Consensus 167 aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 239 (319)
T 3ioy_A 167 TTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-------DALKGEVKPVDKTAVERLAGVHEFGMEPD 239 (319)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------------CCGGGSSBCHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-------hhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence 9999666665543 56899999999999886542110000 00000000000000000 01111237999
Q ss_pred HHHHHHHHHHHh
Q 015874 307 MVVNAMIVAMVA 318 (399)
Q Consensus 307 Dva~~i~~~~~~ 318 (399)
|+|++++.++..
T Consensus 240 ~vA~~~~~al~~ 251 (319)
T 3ioy_A 240 VIGARVIEAMKA 251 (319)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999974
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.6e-19 Score=166.77 Aligned_cols=228 Identities=14% Similarity=0.086 Sum_probs=147.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+||||||+|+||++++++|+++|+ +|.+..++... ..+.+.+.+. ..+.++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~--~~~~~~~~~~------------------~~~~~~~~ 81 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF---TVVINYAGKAA--AAEEVAGKIE------------------AAGGKALT 81 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC---EEEEEESSCSH--HHHHHHHHHH------------------HTTCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHH------------------hcCCeEEE
Confidence 5689999999999999999999999994 45666554432 1222221110 01357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++|++|
T Consensus 82 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 82 AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 9999996442111112222233479999999997532 2457788999999999999988763 2346899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .....|+.||.+.+.+
T Consensus 162 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~~l 185 (267)
T 3u5t_A 162 TSQVGLLH--------------------------------------------------------PSYGIYAAAKAGVEAM 185 (267)
T ss_dssp CTHHHHCC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred ChhhccCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 98654421 1235799999999999
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.+ ..|+++..+.||.|.++..... ... ....... .......+...+|+|++++.++
T Consensus 186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~-----~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~ 248 (267)
T 3u5t_A 186 THVLSKELRGRDITVNAVAPGPTATDLFLEG---KSD-----EVRDRFA---------KLAPLERLGTPQDIAGAVAFLA 248 (267)
T ss_dssp HHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHHH---------TSSTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhCCEEEEEEECCCcCcccccc---CCH-----HHHHHHH---------hcCCCCCCcCHHHHHHHHHHHh
Confidence 9876 3589999999999987543110 000 0011111 1112345778999999999988
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
.... ..-.|..+++.++
T Consensus 249 s~~~-~~itG~~i~vdGG 265 (267)
T 3u5t_A 249 GPDG-AWVNGQVLRANGG 265 (267)
T ss_dssp STTT-TTCCSEEEEESSS
T ss_pred Cccc-cCccCCEEEeCCC
Confidence 6322 2223788988876
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=167.52 Aligned_cols=179 Identities=16% Similarity=0.176 Sum_probs=122.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+|+||||||+|+||++++++|+++| ++|.+.+|+.... ...+.+.+.+ .. .+.++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G---~~V~~~~r~~~~r~~~~~~~l~~~~----------~~--------~~~~~ 61 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAG---HRVYASMRDIVGRNASNVEAIAGFA----------RD--------NDVDL 61 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCTTTTTHHHHHHHHHHH----------HH--------HTCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEecCcccccCHHHHHHHHHHH----------Hh--------cCCcE
Confidence 567999999999999999999999999 5678888874321 1222222211 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+..++
T Consensus 62 ~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~i 141 (324)
T 3u9l_A 62 RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLL 141 (324)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999996432111111111223489999999997532 2567788999999999999998432 366889
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||++.+.... .....|+.||++
T Consensus 142 V~isS~~~~~~~~-------------------------------------------------------~~~~~Y~asKaa 166 (324)
T 3u9l_A 142 IWISSSSSAGGTP-------------------------------------------------------PYLAPYFAAKAA 166 (324)
T ss_dssp EEECCGGGTSCCC-------------------------------------------------------SSCHHHHHHHHH
T ss_pred EEEecchhccCCC-------------------------------------------------------CcchhHHHHHHH
Confidence 9999987653210 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCC
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
.|.+.+.+ ..|+++++++||.|.++..
T Consensus 167 ~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 167 MDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred HHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 99999876 3589999999999986543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=165.99 Aligned_cols=230 Identities=9% Similarity=0.017 Sum_probs=149.8
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+...+.+|+|+||||+|+||++++++|+++|+ +|.+..++... ..+...+++ .. .+.
T Consensus 20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~---~v~i~~~r~~~--~~~~~~~~l---------~~---------~~~ 76 (267)
T 4iiu_A 20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGF---NIGVHYHRDAA--GAQETLNAI---------VA---------NGG 76 (267)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH---------HH---------TTC
T ss_pred hccccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCchH--HHHHHHHHH---------Hh---------cCC
Confidence 34557789999999999999999999999994 55665544321 111111111 10 135
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh----ccCC
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK----CVKL 154 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~----~~~~ 154 (399)
++.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.. ..+.
T Consensus 77 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 156 (267)
T 4iiu_A 77 NGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG 156 (267)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 78999999996432111111111223479999999997642 256788899999999999998642 1356
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 157 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 180 (267)
T 4iiu_A 157 GRIITLSSVSGVMGN--------------------------------------------------------RGQVNYSAA 180 (267)
T ss_dssp EEEEEECCHHHHHCC--------------------------------------------------------TTCHHHHHH
T ss_pred cEEEEEcchHhccCC--------------------------------------------------------CCCchhHHH
Confidence 789999997654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+.+.. ..++++.+++||.|.++..... .......... .....+...+|+|
T Consensus 181 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---------~p~~~~~~~edva 241 (267)
T 4iiu_A 181 KAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----------ESALKEAMSM---------IPMKRMGQAEEVA 241 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----------HHHHHHHHHT---------CTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----------HHHHHHHHhc---------CCCCCCcCHHHHH
Confidence 99888887755 4589999999999988654211 1112222211 1123467899999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..+++.++
T Consensus 242 ~~~~~L~s~~~~-~itG~~i~vdGG 265 (267)
T 4iiu_A 242 GLASYLMSDIAG-YVTRQVISINGG 265 (267)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCCccc-CccCCEEEeCCC
Confidence 999998874322 223789999876
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.6e-19 Score=165.82 Aligned_cols=229 Identities=13% Similarity=0.104 Sum_probs=147.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+|+||||+|+||++++++|+++| .+|.+..|+.... .+...+++ . ..+.++.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~--~~~~~~~~---------~---------~~~~~~~ 61 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEG---ANVVLTYNGAAEG--AATAVAEI---------E---------KLGRSAL 61 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSSCHH--HHHHHHHH---------H---------TTTSCCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH---------H---------hcCCceE
Confidence 4688999999999999999999999999 4557665554321 12211111 0 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 62 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 62 AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 99999996432111111222223479999999986521 2456888999999999999999874 22358999
Q ss_pred Eecceee-cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~v~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||...+ ... .....|+.+|.+.
T Consensus 142 isS~~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 165 (259)
T 3edm_A 142 FSSQAGRDGGG--------------------------------------------------------PGALAYATSKGAV 165 (259)
T ss_dssp ECCHHHHHCCS--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EcCHHhccCCC--------------------------------------------------------CCcHHHHHHHHHH
Confidence 9998765 211 2235799999999
Q ss_pred HHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 239 EMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 239 E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+.+.+.+ ..++++..+.||.|.++...... .. ..... .........+.+.+|+|++++.
T Consensus 166 ~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~---~~-----~~~~~---------~~~~~p~~r~~~pedva~~v~~ 228 (259)
T 3edm_A 166 MTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT---KP-----EVRER---------VAGATSLKREGSSEDVAGLVAF 228 (259)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCcCccccccc---Ch-----HHHHH---------HHhcCCCCCCcCHHHHHHHHHH
Confidence 9998866 23499999999999875432110 00 00000 1111223456789999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... .-.|..+++.++
T Consensus 229 L~s~~~~-~itG~~i~vdGg 247 (259)
T 3edm_A 229 LASDDAA-YVTGACYDINGG 247 (259)
T ss_dssp HHSGGGT-TCCSCEEEESBC
T ss_pred HcCcccc-CccCCEEEECCC
Confidence 8864322 223789999887
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-19 Score=167.37 Aligned_cols=229 Identities=9% Similarity=0.071 Sum_probs=150.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||++++++|+++| .+|.+..|+.... .+...+.+ . ..+.++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~~---------~---------~~~~~~~ 78 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERNDH--VSTWLMHE---------R---------DAGRDFK 78 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEECSCHHH--HHHHHHHH---------H---------TTTCCCE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCchHH--HHHHHHHH---------H---------hcCCceE
Confidence 3678999999999999999999999999 5567776543221 11111111 0 0136789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++... .+..+||
T Consensus 79 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv 158 (269)
T 3gk3_A 79 AYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIV 158 (269)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999996432111111222223479999999997532 2567788999999999999987652 2567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|.+.
T Consensus 159 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 182 (269)
T 3gk3_A 159 NIGSVNGSRGA--------------------------------------------------------FGQANYASAKAGI 182 (269)
T ss_dssp EECCHHHHHCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EeCChhhccCC--------------------------------------------------------CCcchHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.+ ..++++.+++||.|.++...... .. .. ... . ........+...+|+|++++
T Consensus 183 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~------~~----~~~--~--~~~~~~~~~~~p~dvA~~v~ 245 (269)
T 3gk3_A 183 HGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP---QD------VL----EAK--I--LPQIPVGRLGRPDEVAALIA 245 (269)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------------CC--S--GGGCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc---hh------HH----HHH--h--hhcCCcCCccCHHHHHHHHH
Confidence 9888765 45899999999999886542111 00 00 000 0 01112345678999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... ..-.+..+++.++
T Consensus 246 ~L~s~~~-~~itG~~i~vdgG 265 (269)
T 3gk3_A 246 FLCSDDA-GFVTGADLAINGG 265 (269)
T ss_dssp HHTSTTC-TTCCSCEEEESTT
T ss_pred HHhCCCc-CCeeCcEEEECCC
Confidence 8886332 2223789999987
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-19 Score=165.65 Aligned_cols=232 Identities=14% Similarity=0.083 Sum_probs=151.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+.+|+||||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ ... .+.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~--------~~~~ 72 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEA---SEAAQKL---------TEK--------YGVE 72 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------HCCC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HHh--------cCCe
Confidence 345788999999999999999999999999 5668888875332 1111111 000 1256
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 73 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~ 152 (267)
T 1vl8_A 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS 152 (267)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 8889999996432111111111223479999999997532 2456788999999999999887542 24679
Q ss_pred EEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 157 FVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 157 ~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
||++||..+ .... .....|+.+|
T Consensus 153 iv~isS~~~~~~~~--------------------------------------------------------~~~~~Y~asK 176 (267)
T 1vl8_A 153 IINIGSLTVEEVTM--------------------------------------------------------PNISAYAASK 176 (267)
T ss_dssp EEEECCGGGTCCCS--------------------------------------------------------SSCHHHHHHH
T ss_pred EEEECCcchhccCC--------------------------------------------------------CCChhHHHHH
Confidence 999999863 2110 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+++.+ ..++++++++||.|.++.... +... .......... . ....++..+|+|+
T Consensus 177 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~----~~~~~~~~~~----~-----p~~~~~~p~dvA~ 240 (267)
T 1vl8_A 177 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFSD----PEKLDYMLKR----I-----PLGRTGVPEDLKG 240 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHTC----HHHHHHHHHT----C-----TTSSCBCGGGGHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc---cccC----hHHHHHHHhh----C-----CCCCCcCHHHHHH
Confidence 9999998866 358999999999997754310 0000 0111111111 0 1124678899999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++...... -.+..+.+.++
T Consensus 241 ~v~~l~s~~~~~-itG~~i~vdGG 263 (267)
T 1vl8_A 241 VAVFLASEEAKY-VTGQIIFVDGG 263 (267)
T ss_dssp HHHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHHcCccccC-CcCCeEEECCC
Confidence 999988643221 12678888876
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=163.27 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=146.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||++++++|+++| ++|.++.|+.+.. .++.
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~~ 56 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------------KGLF 56 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSE
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--------------------------------HHhc
Confidence 4678999999999999999999999999 5678888876543 1222
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
.+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 57 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 136 (247)
T 1uzm_A 57 GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 136 (247)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 47899996432111111111223478999999997532 2567888999999999999987652 2568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 137 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 160 (247)
T 1uzm_A 137 FIGSVSGLWGI--------------------------------------------------------GNQANYAASKAGV 160 (247)
T ss_dssp EECCCCC-------------------------------------------------------------CCHHHHHHHHHH
T ss_pred EECCHhhccCC--------------------------------------------------------CCChhHHHHHHHH
Confidence 99998644311 1135799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..++++++++||.|.++.... + . ......... .. ....+++.+|+|++++
T Consensus 161 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~----~--~~~~~~~~~----~~-----p~~~~~~~~dvA~~~~ 222 (247)
T 1uzm_A 161 IGMARSIARELSKANVTANVVAPGYIDTDMTRA---L----D--ERIQQGALQ----FI-----PAKRVGTPAEVAGVVS 222 (247)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---S----C--HHHHHHHGG----GC-----TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh---c----C--HHHHHHHHh----cC-----CCCCCcCHHHHHHHHH
Confidence 9888765 358999999999997643210 0 0 011111111 01 1234789999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... .-.+..+++.++
T Consensus 223 ~l~s~~~~-~~~G~~i~vdgG 242 (247)
T 1uzm_A 223 FLASEDAS-YISGAVIPVDGG 242 (247)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHcCcccc-CCcCCEEEECCC
Confidence 98863322 122789999887
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-19 Score=170.28 Aligned_cols=247 Identities=13% Similarity=0.120 Sum_probs=155.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||+++++.|+++| .+|.++.|+.+.. +...+++ ... + ....++.
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-~-----~~~~~~~ 81 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRL---EETKQQI---------LKA-G-----VPAEKIN 81 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHT-T-----CCGGGEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhc-C-----CCCceEE
Confidence 3678999999999999999999999999 5668888875432 2222111 000 0 0012688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. ....+|
T Consensus 82 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~I 161 (297)
T 1xhl_A 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEI 161 (297)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEE
Confidence 99999996432111111111223479999999996431 2457788999999999999988763 112799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... .....|+.+|..
T Consensus 162 V~isS~~~~~~~~-------------------------------------------------------~~~~~Y~asKaa 186 (297)
T 1xhl_A 162 VNVSSIVAGPQAH-------------------------------------------------------SGYPYYACAKAA 186 (297)
T ss_dssp EEECCGGGSSSCC-------------------------------------------------------TTSHHHHHHHHH
T ss_pred EEEcCchhccCCC-------------------------------------------------------CCcchHHHHHHH
Confidence 9999987654210 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.+.+ ..|+++++++||.|.++....... ..... ........... ......+...+|+|++
T Consensus 187 ~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~ 256 (297)
T 1xhl_A 187 LDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL-PETASDKLYSFIGSRKE---------CIPVGHCGKPEEIANI 256 (297)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC-CHHHHHHHHHHHHHCTT---------TCTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc-ccccccchHHHHHHHHh---------cCCCCCCcCHHHHHHH
Confidence 99988765 468999999999998854211000 00000 00001111111 0112357899999999
Q ss_pred HHHHHHhc-cCCCCCCcEEEecCCCCCcccHHHH
Q 015874 312 MIVAMVAH-AKQPSDANIYHVGSSLRNPVTLVSI 344 (399)
Q Consensus 312 i~~~~~~~-~~~~~~~~~yni~~~~~~~~s~~el 344 (399)
++.++... ... -.+..+++.++ ..+...+.
T Consensus 257 v~~l~s~~~~~~-itG~~i~vdGG--~~~~~~~~ 287 (297)
T 1xhl_A 257 IVFLADRNLSSY-IIGQSIVADGG--STLVMGMQ 287 (297)
T ss_dssp HHHHHCHHHHTT-CCSCEEEESTT--GGGCCGGG
T ss_pred HHHHhCCcccCC-ccCcEEEECCC--cccccccc
Confidence 99988643 221 12788999887 44444443
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-18 Score=160.44 Aligned_cols=231 Identities=14% Similarity=0.094 Sum_probs=147.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| ++|.+..|+.+.. +...+++ .. .+.++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~~~ 57 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDATA---KAVASEI---------NQ---------AGGHAVAVK 57 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEEEE
Confidence 5899999999999999999999999 5668888875332 2221111 00 124688999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-CceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~~v~~ 160 (399)
+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ ..+||++
T Consensus 58 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 137 (256)
T 1geg_A 58 VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 137 (256)
T ss_dssp CCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99996432111111111122379999999997532 2457788999999999998887653 13 5789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 138 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 161 (256)
T 1geg_A 138 CSQAGHVGN--------------------------------------------------------PELAVYSSSKFAVRG 161 (256)
T ss_dssp CCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHHH
T ss_pred CchhhcCCC--------------------------------------------------------CCchhHHHHHHHHHH
Confidence 998643311 113579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhh---cCcc-ccccCCCccccCeeeHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASA---QGNL-RCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+ ..++++++++||.|.++... . ....+.... .... ..+. .......+.+.+|+|++
T Consensus 162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------~---~~~~~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~dvA~~ 230 (256)
T 1geg_A 162 LTQTAARDLAPLGITVNGYCPGIVKTPMWA-------E---IDRQVSEAAGKPLGYGTAEFA-KRITLGRLSEPEDVAAC 230 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHH-------H---HHHHHHHHHTCCTTHHHHHHH-TTCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHcCeEEEEEEECCCccchhh-------h---hhhhccccccCChHHHHHHHH-hcCCCCCCcCHHHHHHH
Confidence 88766 35899999999999874320 0 000000000 0000 0000 00112347899999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++...... -.+..+++.++
T Consensus 231 v~~l~s~~~~~-~tG~~i~vdGG 252 (256)
T 1geg_A 231 VSYLASPDSDY-MTGQSLLIDGG 252 (256)
T ss_dssp HHHHHSGGGTT-CCSCEEEESSS
T ss_pred HHHHhCccccC-CCCCEEEeCCC
Confidence 99988643221 22788998886
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=165.88 Aligned_cols=236 Identities=13% Similarity=0.028 Sum_probs=153.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ . ..+.++.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~l-------------~-----~~~~~~~ 80 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADG---VTVGALGRTRTEV---EEVADEI-------------V-----GAGGQAI 80 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH-------------T-----TTTCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH-------------H-----hcCCcEE
Confidence 3678999999999999999999999999 5668888875432 2222221 0 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 81 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~I 160 (283)
T 3v8b_A 81 ALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAI 160 (283)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceE
Confidence 99999996432111112222233479999999997532 2567888999999999999988432 256799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... ......|+.+|.+
T Consensus 161 v~isS~~~~~~~~------------------------------------------------------~~~~~~Y~asKaa 186 (283)
T 3v8b_A 161 VVVSSINGTRTFT------------------------------------------------------TPGATAYTATKAA 186 (283)
T ss_dssp EEECCSBTTTBCC------------------------------------------------------STTCHHHHHHHHH
T ss_pred EEEcChhhccCCC------------------------------------------------------CCCchHHHHHHHH
Confidence 9999986543111 0224579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccc--cCeeeHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI--MDVIPVDMVVN 310 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~Dva~ 310 (399)
.+.+.+.+ ..++++..++||.|.++....... .. . ... ............. ..+...+|+|+
T Consensus 187 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~-----~-~~~---~~~~~~~~~~~p~~~~r~~~pedvA~ 255 (283)
T 3v8b_A 187 QVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL--RH-----E-EET---AIPVEWPKGQVPITDGQPGRSEDVAE 255 (283)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB--CC-----H-HHH---SCCCBCTTCSCGGGTTCCBCHHHHHH
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc--cc-----c-hhh---hhhhhhhhhcCccccCCCCCHHHHHH
Confidence 99999876 358999999999998865422100 00 0 000 0000001111111 34678899999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.|..+++.++
T Consensus 256 ~v~fL~s~~a~-~itG~~i~vdGG 278 (283)
T 3v8b_A 256 LIRFLVSERAR-HVTGSPVWIDGG 278 (283)
T ss_dssp HHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHcCcccc-CCcCCEEEECcC
Confidence 99998864332 223788999886
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-18 Score=163.54 Aligned_cols=228 Identities=13% Similarity=0.050 Sum_probs=151.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+|+||||+|+||+++++.|+++| .+|.+..|+... ..+...+++ .. .+.++.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~l---------~~---------~~~~~~ 84 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEG---AAVALTYVNAAE--RAQAVVSEI---------EQ---------AGGRAV 84 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 3678999999999999999999999999 455776665422 122222211 00 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||++
T Consensus 85 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 85 AIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 99999996432111111111223479999999997532 2567888999999999999998764 345789999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||....... ......|+.+|...+.
T Consensus 165 sS~~~~~~~-------------------------------------------------------~~~~~~Y~asKaa~~~ 189 (271)
T 3v2g_A 165 GSNLAELVP-------------------------------------------------------WPGISLYSASKAALAG 189 (271)
T ss_dssp CCGGGTCCC-------------------------------------------------------STTCHHHHHHHHHHHH
T ss_pred eChhhccCC-------------------------------------------------------CCCchHHHHHHHHHHH
Confidence 886432110 0223579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.+ ..++++..++||.|.++....... . ....... . ....+...+|+|++++.+
T Consensus 190 l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------~----~~~~~~~----~-----~~~r~~~pedvA~~v~fL 250 (271)
T 3v2g_A 190 LTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD------H----AEAQRER----I-----ATGSYGEPQDIAGLVAWL 250 (271)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS------S----HHHHHHT----C-----TTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhCeEEEEEecCCCcCCcccccch------h----HHHHHhc----C-----CCCCCCCHHHHHHHHHHH
Confidence 98766 458999999999999876522111 0 1111110 0 122356789999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+..... .-.|..+++.++
T Consensus 251 ~s~~~~-~itG~~i~vdGG 268 (271)
T 3v2g_A 251 AGPQGK-FVTGASLTIDGG 268 (271)
T ss_dssp HSGGGT-TCCSCEEEESTT
T ss_pred hCcccC-CccCCEEEeCcC
Confidence 863322 223789999876
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-19 Score=165.71 Aligned_cols=205 Identities=14% Similarity=0.125 Sum_probs=138.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+||||||+|+||+++++.|+++| .+|.++.|+.... +...+++ .+ .+.++
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~ 80 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEKL---RAVEREI---------VA---------AGGEA 80 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCEE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------HH---------hCCce
Confidence 34678999999999999999999999999 5668888875432 2222111 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC--------ccccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--------FDERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||... ..+.++..+++|+.++.++++++.+. .+..+
T Consensus 81 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 160 (262)
T 3rkr_A 81 ESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGH 160 (262)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCce
Confidence 89999999643211111112222346999999999731 12557788999999999999987652 35679
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 161 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 184 (262)
T 3rkr_A 161 IINISSLAGKNPV--------------------------------------------------------ADGAAYTASKW 184 (262)
T ss_dssp EEEECSSCSSCCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEechhhcCCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999998755421 22357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+++.+ ..++++++++||.|.++..... . .......++..+|+|++
T Consensus 185 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------------~---------~~~~~~~~~~p~dvA~~ 238 (262)
T 3rkr_A 185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL-----------------S---------AKKSALGAIEPDDIADV 238 (262)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc-----------------c---------cccccccCCCHHHHHHH
Confidence 999998766 4689999999999876432100 0 00112346789999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++..
T Consensus 239 v~~l~s~ 245 (262)
T 3rkr_A 239 VALLATQ 245 (262)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998874
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-18 Score=158.60 Aligned_cols=232 Identities=15% Similarity=0.126 Sum_probs=150.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| ++|.+..|+.+.. ..+...+++ .. .+.++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~-~~~~~~~~~---------~~---------~~~~~~~~~ 59 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADG---FDIAVADLPQQEE-QAAETIKLI---------EA---------ADQKAVFVG 59 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECGGGHH-HHHHHHHHH---------HT---------TTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchH-HHHHHHHHH---------Hh---------cCCcEEEEE
Confidence 6899999999999999999999999 5668888876431 022222111 00 135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC-ceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL-KVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~-~~~v~~ 160 (399)
+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+. .+||++
T Consensus 60 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 139 (258)
T 3a28_C 60 LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA 139 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99996432111111111223479999999997532 2467788999999999999988763 245 799999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 140 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 163 (258)
T 3a28_C 140 ASIAAIQGF--------------------------------------------------------PILSAYSTTKFAVRG 163 (258)
T ss_dssp CCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHH
T ss_pred CcchhccCC--------------------------------------------------------CCchhHHHHHHHHHH
Confidence 998654321 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCc-----chHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL-----KTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+.+.+ ..++++++++||.|.++.... +.... ............ ......+...+|+|+
T Consensus 164 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~ 231 (258)
T 3a28_C 164 LTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSS---------SIALGRPSVPEDVAG 231 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHT---------TCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHhhCeEEEEEECCccCChhhhh---hhhhhccccCCchHHHHHHHHh---------cCCCCCccCHHHHHH
Confidence 88765 458999999999987643200 00000 000000111100 011234789999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++...... -.+..+++.++
T Consensus 232 ~v~~l~s~~~~~-~tG~~i~vdGG 254 (258)
T 3a28_C 232 LVSFLASENSNY-VTGQVMLVDGG 254 (258)
T ss_dssp HHHHHHSGGGTT-CCSCEEEESSS
T ss_pred HHHHHhCcccCC-CCCCEEEECCC
Confidence 999988643221 22788999887
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=169.87 Aligned_cols=241 Identities=15% Similarity=0.197 Sum_probs=152.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .+. ..+.++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-------~~~~~~~~ 62 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAG---VQCKAAL---------HEQ-------FEPQKTLF 62 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------TTT-------SCGGGEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hhh-------cCCCceEE
Confidence 678999999999999999999999999 5668888865322 1111111 000 01246889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc----c--CCceEEEEecc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC----V--KLKVFVHVSTA 163 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~----~--~~~~~v~~SS~ 163 (399)
+.+|+++++......+...+.+.++|+|||+||... .+.++..+++|+.++..+.+.+.+. . +..+||++||.
T Consensus 63 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 141 (267)
T 2gdz_A 63 IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 141 (267)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence 999999643211111111122346899999999754 4667888999999877776665432 1 15789999998
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+.+... .....|+.+|...+.+.+
T Consensus 142 ~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~ 165 (267)
T 2gdz_A 142 AGLMPV--------------------------------------------------------AQQPVYCASKHGIVGFTR 165 (267)
T ss_dssp GGTSCC--------------------------------------------------------TTCHHHHHHHHHHHHHHH
T ss_pred cccCCC--------------------------------------------------------CCCchHHHHHHHHHHHHH
Confidence 765421 113579999999998887
Q ss_pred Hh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 244 QS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 244 ~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+ ..++++++++||.|.++.... .... ...... ......+ ........+++.+|+|++++.++
T Consensus 166 ~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-----~~~~~~-~~~~~~~-~~~~~~~~~~~~~dvA~~v~~l~ 235 (267)
T 2gdz_A 166 SAALAANLMNSGVRLNAICPGFVNTAILES---IEKE-----ENMGQY-IEYKDHI-KDMIKYYGILDPPLIANGLITLI 235 (267)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCBSSHHHHG---GGCH-----HHHGGG-GGGHHHH-HHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCcEEEEEecCcCcchhhhc---cccc-----cccchh-hhHHHHH-HHHhccccCCCHHHHHHHHHHHh
Confidence 52 468999999999997743210 0000 000000 0000000 00011235789999999999998
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHH
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSI 344 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el 344 (399)
... .. .+.++++.++ ..+++.|+
T Consensus 236 s~~-~~--~G~~~~v~gg--~~~~~~~~ 258 (267)
T 2gdz_A 236 EDD-AL--NGAIMKITTS--KGIHFQDY 258 (267)
T ss_dssp HCT-TC--SSCEEEEETT--TEEEECCC
T ss_pred cCc-CC--CCcEEEecCC--CcccccCc
Confidence 743 22 2789999987 55665543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=163.82 Aligned_cols=217 Identities=13% Similarity=0.122 Sum_probs=146.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+|+||||+|+||++++++|+++| ++|.+..|+.+.. .++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--------------------------------~~~ 61 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAG---DKVAITYRSGEPP--------------------------------EGF 61 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHhh--------------------------------ccc
Confidence 45778999999999999999999999999 5668888876542 346
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 62 ~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~i 141 (253)
T 2nm0_A 62 LAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRV 141 (253)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 788999996432111111111223468999999997532 3568889999999999999987653 256799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+.... ....|+.+|..
T Consensus 142 v~isS~~~~~~~~--------------------------------------------------------~~~~Y~asK~a 165 (253)
T 2nm0_A 142 VLISSVVGLLGSA--------------------------------------------------------GQANYAASKAG 165 (253)
T ss_dssp EEECCCCCCCCHH--------------------------------------------------------HHHHHHHHHHH
T ss_pred EEECchhhCCCCC--------------------------------------------------------CcHHHHHHHHH
Confidence 9999986543210 02469999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..++++++++||.|.++.... +... ........ .....+++.+|+|+++
T Consensus 166 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~------~~~~~~~~---------~p~~~~~~p~dvA~~i 227 (253)
T 2nm0_A 166 LVGFARSLARELGSRNITFNVVAPGFVDTDMTKV---LTDE------QRANIVSQ---------VPLGRYARPEEIAATV 227 (253)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CHHHHHTT---------CTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cCHH------HHHHHHhc---------CCCCCCcCHHHHHHHH
Confidence 99988765 458999999999987654311 0000 00111110 0123478999999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.+..+.+.++
T Consensus 228 ~~l~s~~~~-~~tG~~i~vdGG 248 (253)
T 2nm0_A 228 RFLASDDAS-YITGAVIPVDGG 248 (253)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCcccc-CCcCcEEEECCc
Confidence 998864322 122788988886
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-19 Score=166.89 Aligned_cols=227 Identities=14% Similarity=0.130 Sum_probs=149.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| .+|.++.|+.+. .+...+++ .. ..++.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~---~~~~~~~l-------------~~------~~~~~~ 81 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAG---ARVFICARDAEA---CADTATRL-------------SA------YGDCQA 81 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHHH-------------TT------SSCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHH-------------Hh------cCceEE
Confidence 678999999999999999999999999 556888776532 22222211 00 126888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC----c
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL----K 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~----~ 155 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+. .
T Consensus 82 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g 161 (276)
T 2b4q_A 82 IPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA 161 (276)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE
T ss_pred EEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC
Confidence 9999996432111111111223479999999997532 2567888999999999998877542 133 7
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc-hhhHh
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN-TYVFT 234 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~s 234 (399)
+||++||...+.... ... .|+.+
T Consensus 162 ~iV~isS~~~~~~~~--------------------------------------------------------~~~~~Y~as 185 (276)
T 2b4q_A 162 RVINIGSVAGISAMG--------------------------------------------------------EQAYAYGPS 185 (276)
T ss_dssp EEEEECCGGGTCCCC--------------------------------------------------------CSCTTHHHH
T ss_pred EEEEECCHHHcCCCC--------------------------------------------------------CCccccHHH
Confidence 999999987654211 123 79999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.+ ..++++++++||.|.++.... +.. ......... ... ....+.+.+|+|
T Consensus 186 K~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~------~~~~~~~~~--~~~-----p~~r~~~p~dvA 249 (276)
T 2b4q_A 186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IAN------DPQALEADS--ASI-----PMGRWGRPEEMA 249 (276)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHH------CHHHHHHHH--HTS-----TTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cch------hHHHHHHhh--cCC-----CCCCcCCHHHHH
Confidence 99999998866 358999999999998754310 000 000111000 000 123478999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..+++.++
T Consensus 250 ~~v~~l~s~~~~-~~tG~~i~vdGG 273 (276)
T 2b4q_A 250 ALAISLAGTAGA-YMTGNVIPIDGG 273 (276)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccc-CCCCCEEEeCCC
Confidence 999998864322 222788998876
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=163.77 Aligned_cols=211 Identities=11% Similarity=0.031 Sum_probs=134.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||++++++|+++| .+|.++.|+.+..... .+++ .+ .+.++
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~---~~~~---------~~---------~~~~~ 58 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEKLAPL---VAEI---------EA---------AGGRI 58 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHH---HHHH---------HH---------TTCEE
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH---HHHH---------Hh---------cCCeE
Confidence 35789999999999999999999999999 5678888876554322 2111 00 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+. .++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 59 ~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 137 (252)
T 3h7a_A 59 VARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKI 137 (252)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99999999643211111111111 478999999997532 2567888999999999999887542 245789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.||.+
T Consensus 138 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 161 (252)
T 3h7a_A 138 FFTGATASLRGG--------------------------------------------------------SGFAAFASAKFG 161 (252)
T ss_dssp EEEEEGGGTCCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEECCHHHcCCC--------------------------------------------------------CCCccHHHHHHH
Confidence 999998654321 123579999999
Q ss_pred HHHHHHHh-----hCCCcE-EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSL-VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~-~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.+.. ..++++ .++.||.|.++..... .. .... .+ ....... ++..+|+|++
T Consensus 162 ~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~------~~~~--------~~-~~~~~~~-~~~pedvA~~ 222 (252)
T 3h7a_A 162 LRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---RE------QMFG--------KD-ALANPDL-LMPPAAVAGA 222 (252)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---ch------hhhh--------hh-hhcCCcc-CCCHHHHHHH
Confidence 99998866 458999 8999999877543110 00 0000 00 1111223 8899999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++..
T Consensus 223 ~~~l~s~ 229 (252)
T 3h7a_A 223 YWQLYQQ 229 (252)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999974
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-19 Score=168.60 Aligned_cols=239 Identities=14% Similarity=0.110 Sum_probs=154.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+||||||+|+||+++++.|+++| .+|.+..|+... ..+...+++. . .+.++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~~~~~~--~~~~~~~~~~---------~---------~~~~~ 70 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLG---AKVVVNYANSTK--DAEKVVSEIK---------A---------LGSDA 70 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH---------H---------TTCCE
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHH---------h---------cCCcE
Confidence 45789999999999999999999999999 455776665422 1222222110 0 13678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..++|+
T Consensus 71 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 71 IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999996432111112222233479999999997642 2567888999999999999998774 23458999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... ......|+.||...+
T Consensus 151 isS~~~~~~~-------------------------------------------------------~~~~~~Y~asKaa~~ 175 (270)
T 3is3_A 151 TSSNTSKDFS-------------------------------------------------------VPKHSLYSGSKGAVD 175 (270)
T ss_dssp ECCTTTTTCC-------------------------------------------------------CTTCHHHHHHHHHHH
T ss_pred EeCchhccCC-------------------------------------------------------CCCCchhHHHHHHHH
Confidence 9997521100 122457999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCC-CcccC--cchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
.+.+.+ ..|+++..++||.|.++...... .+... ............. ......+...+|+|++
T Consensus 176 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~ 246 (270)
T 3is3_A 176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH---------ASPLHRNGWPQDVANV 246 (270)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH---------HSTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh---------cCCCCCCCCHHHHHHH
Confidence 998866 46899999999999886531100 00000 0000011111110 1123346789999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.|..+++.++
T Consensus 247 v~~L~s~~~~-~itG~~i~vdGG 268 (270)
T 3is3_A 247 VGFLVSKEGE-WVNGKVLTLDGG 268 (270)
T ss_dssp HHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHcCCccC-CccCcEEEeCCC
Confidence 9998863322 223788999876
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=163.48 Aligned_cols=226 Identities=12% Similarity=0.074 Sum_probs=147.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+...........+. .+.++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~---------------------~~~~~~~ 87 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAG---ADVAIWYNSHPADEKAEHLQKT---------------------YGVHSKA 87 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHT---CEEEEEESSSCCHHHHHHHHHH---------------------HCSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh---------------------cCCcceE
Confidence 678999999999999999999999999 5678888887543222111100 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------c---ccHHHHHHHhHHHHH----HHHHHHHhccCCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------D---ERYDVAFGINTLGVI----HLVNFAKKCVKLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~---~~~~~~~~~n~~~~~----~ll~~a~~~~~~~~ 156 (399)
+.+|+++++......+...+.+.++|+|||+||.... . +.++..+++|+.++. +++..+++. +..+
T Consensus 88 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~ 166 (279)
T 3ctm_A 88 YKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGS 166 (279)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred EEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence 9999996432111111111122469999999997533 1 345678899999965 444555543 6789
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+.... ..+...|+.+|.
T Consensus 167 iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~~sK~ 192 (279)
T 3ctm_A 167 LIITSSISGKIVNI------------------------------------------------------PQLQAPYNTAKA 192 (279)
T ss_dssp EEEECCCTTSCC---------------------------------------------------------CCHHHHHHHHH
T ss_pred EEEECchHhccCCC------------------------------------------------------CCCcccHHHHHH
Confidence 99999986543200 012357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..|.+++.+ ..+ ++++++||.|.++.... .. ......... .. ....+++.+|+|++
T Consensus 193 a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~----~~-----~~~~~~~~~----~~-----p~~~~~~~~dvA~~ 253 (279)
T 3ctm_A 193 ACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF----AS-----KDMKAKWWQ----LT-----PLGREGLTQELVGG 253 (279)
T ss_dssp HHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS----CC-----HHHHHHHHH----HS-----TTCSCBCGGGTHHH
T ss_pred HHHHHHHHHHHHhcccC-CEEEEeccCCccccccc----cC-----hHHHHHHHH----hC-----CccCCcCHHHHHHH
Confidence 999999876 346 99999999998765311 01 011111111 00 12347889999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++...... -.+..+++.++
T Consensus 254 ~~~l~s~~~~~-~tG~~i~vdgG 275 (279)
T 3ctm_A 254 YLYLASNASTF-TTGSDVVIDGG 275 (279)
T ss_dssp HHHHHSGGGTT-CCSCEEEESTT
T ss_pred HHHHhCccccC-ccCCEEEECCC
Confidence 99988643221 22789999887
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-19 Score=168.64 Aligned_cols=235 Identities=15% Similarity=0.145 Sum_probs=153.3
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+...+.||+||||||+|+||.++++.|+++|+...+|.+..|+.+.. +.+.+++ ... ..+.
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~---~~~~~~l---------~~~-------~~~~ 87 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL---EELKKTI---------DQE-------FPNA 87 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH---HHHHHHH---------HHH-------CTTC
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH---HHHHHHH---------Hhh-------CCCC
Confidence 34678999999999999999999999999996434778888875433 2222211 110 0135
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC--------ccccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK--------FDERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
++.++.+|+++++......+...+.+.++|++||+||... ..+.++..+++|+.++.++++++.+. .+.
T Consensus 88 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 167 (287)
T 3rku_A 88 KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNS 167 (287)
T ss_dssp EEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7889999999644211111111111236899999999753 12567888999999999999988542 356
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 168 g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 191 (287)
T 3rku_A 168 GDIVNLGSIAGRDAY--------------------------------------------------------PTGSIYCAS 191 (287)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred CeEEEECChhhcCCC--------------------------------------------------------CCCchHHHH
Confidence 799999998654321 223579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|.+.+.+.+.. ..|++++.++||.|.++.... .+... ......... ....+..+|+|
T Consensus 192 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--~~~~~----~~~~~~~~~------------~~~p~~pedvA 253 (287)
T 3rku_A 192 KFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLV--RYRGN----EEQAKNVYK------------DTTPLMADDVA 253 (287)
T ss_dssp HHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHH--HTTTC----HHHHHHHHT------------TSCCEEHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccc--cccCc----HHHHHHhhc------------ccCCCCHHHHH
Confidence 99999998876 368999999999998753100 00000 000111000 11234889999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+.++.+.++
T Consensus 254 ~~v~~l~s~~~~-~i~g~~i~v~~g 277 (287)
T 3rku_A 254 DLIVYATSRKQN-TVIADTLIFPTN 277 (287)
T ss_dssp HHHHHHHTSCTT-EEEEEEEEEETT
T ss_pred HHHHHHhCCCCC-eEecceEEeeCC
Confidence 999999974322 112567777765
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=165.31 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=152.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+++ ... + ....++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-~-----~~~~~~~~ 62 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSERL---EETRQII---------LKS-G-----VSEKQVNS 62 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HTT-T-----CCGGGEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HHc-C-----CCCcceEE
Confidence 678999999999999999999999999 5668888875332 2222111 000 0 00126889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+ .
T Consensus 63 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g 141 (280)
T 1xkq_A 63 VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G 141 (280)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C
Confidence 9999996432111111111223479999999996531 2457788999999999999988753 13 7
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+.... .....|+.+|
T Consensus 142 ~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~asK 166 (280)
T 1xkq_A 142 EIVNVSSIVAGPQAQ-------------------------------------------------------PDFLYYAIAK 166 (280)
T ss_dssp EEEEECCGGGSSSCC-------------------------------------------------------CSSHHHHHHH
T ss_pred cEEEecCccccCCCC-------------------------------------------------------CcccHHHHHH
Confidence 999999987654210 1135799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++++++||.|.++.................+...... ......+.+.+|+|+
T Consensus 167 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~pedvA~ 237 (280)
T 1xkq_A 167 AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE---------CIPIGAAGKPEHIAN 237 (280)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT---------TCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHc---------CCCCCCCCCHHHHHH
Confidence 9999998766 45899999999999886431100000000000011111111 011235789999999
Q ss_pred HHHHHHHhc-cCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAH-AKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~-~~~~~~~~~yni~~~ 334 (399)
+++.++... ... -.+..+++.++
T Consensus 238 ~v~~l~s~~~~~~-~tG~~i~vdgG 261 (280)
T 1xkq_A 238 IILFLADRNLSFY-ILGQSIVADGG 261 (280)
T ss_dssp HHHHHHCHHHHTT-CCSCEEEESTT
T ss_pred HHHHhcCcccccC-ccCCeEEECCC
Confidence 999988643 221 12788999887
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=167.86 Aligned_cols=232 Identities=10% Similarity=0.085 Sum_probs=154.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+|+||||+|+||.++++.|+++| .+|.+..|+.+... ...+++ ... .+.++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~--------~~~~~ 79 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIASRSLPRVL---TAARKL---------AGA--------TGRRC 79 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCHHHHH---HHHHHH---------HHH--------HSSCE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------HHh--------cCCcE
Confidence 34789999999999999999999999999 56688888754321 111111 000 13678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+|
T Consensus 80 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 159 (277)
T 4fc7_A 80 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVI 159 (277)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence 999999996432111112222223479999999996432 2567888999999999999987542 245689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 160 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 183 (277)
T 4fc7_A 160 VNITATLGNRGQ--------------------------------------------------------ALQVHAGSAKAA 183 (277)
T ss_dssp EEECCSHHHHTC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEECchhhCCCC--------------------------------------------------------CCcHHHHHHHHH
Confidence 999998654421 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.+ ..|+++..++||.|.++.... .+... .......... .....+...+|+|+++
T Consensus 184 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~----~~~~~~~~~~---------~p~~r~~~p~dvA~~v 248 (277)
T 4fc7_A 184 VDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLR--RLGGP----QASLSTKVTA---------SPLQRLGNKTEIAHSV 248 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHH--HHSCC----HHHHHHHHHT---------STTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEECCEecchhhh--hccCC----HHHHHHHhcc---------CCCCCCcCHHHHHHHH
Confidence 99998866 458999999999998753200 00000 0111111111 1223467899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... .-.|..+++.++
T Consensus 249 ~fL~s~~~~-~itG~~i~vdGG 269 (277)
T 4fc7_A 249 LYLASPLAS-YVTGAVLVADGG 269 (277)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHcCCccC-CcCCCEEEECCC
Confidence 998874322 223789999887
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=160.47 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=146.5
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
....+++|+|+||||+|+||++++++|+++| ++|.++.|+.. ... ++ .
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~------~~~-~~----------------------~ 60 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNEE------LLK-RS----------------------G 60 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHH-HT----------------------C
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHH------HHH-hh----------------------C
Confidence 3466889999999999999999999999999 56688888641 111 00 2
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++ +|+.+ +.+...+...++|+|||+||.... .+.++..+++|+.++.++.+++.+. .+..
T Consensus 61 ~~~~~-~D~~~------~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g 133 (249)
T 1o5i_A 61 HRYVV-CDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG 133 (249)
T ss_dssp SEEEE-CCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CeEEE-eeHHH------HHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence 46667 99831 233332444589999999996532 2457788999999988887665432 2568
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 134 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 157 (249)
T 1o5i_A 134 RIVAITSFSVISPI--------------------------------------------------------ENLYTSNSAR 157 (249)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEcchHhcCCC--------------------------------------------------------CCCchHHHHH
Confidence 99999999776532 1135799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHH-HhhcCccccccCCCccccCeeeHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFV-ASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
...+.+.+.. ..++++++++||.|.++.... +.. .... ..... .....+++.+|+|
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~------~~~~~~~~~~---------~p~~~~~~~~dvA 219 (249)
T 1o5i_A 158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS------EEKKKQVESQ---------IPMRRMAKPEEIA 219 (249)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC------HHHHHHHHTT---------STTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---cch------hhHHHHHHhc---------CCCCCCcCHHHHH
Confidence 9999988765 358999999999998865310 000 0111 11110 1123578999999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++..... .-.+..|++.++
T Consensus 220 ~~i~~l~s~~~~-~~tG~~~~vdgG 243 (249)
T 1o5i_A 220 SVVAFLCSEKAS-YLTGQTIVVDGG 243 (249)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCcccc-CCCCCEEEECCC
Confidence 999998864322 222789999887
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-18 Score=158.09 Aligned_cols=218 Identities=12% Similarity=0.099 Sum_probs=147.9
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+++|+|+||||+|+||++++++|+++|.+..+|+++.|+......++.+.+ ...+
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~----------------------~~~~ 73 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK----------------------NHSN 73 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH----------------------HCTT
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhc----------------------cCCc
Confidence 355788999999999999999999999998333356888998765433322211 0257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHHHhc---c-
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC---V- 152 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~-~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~- 152 (399)
+.++.+|+++++......+...+.+. ++|+|||+||... . .+.++..+++|+.++.++++++.+. .
T Consensus 74 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 153 (267)
T 1sny_A 74 IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAA 153 (267)
T ss_dssp EEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcc
Confidence 89999999965431111111111222 7999999999754 1 2557778999999999999988663 1
Q ss_pred -----C-----CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 015874 153 -----K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (399)
Q Consensus 153 -----~-----~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
+ ..+||++||...+....
T Consensus 154 ~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------------------- 181 (267)
T 1sny_A 154 KANESQPMGVGRAAIINMSSILGSIQGN---------------------------------------------------- 181 (267)
T ss_dssp HHTTTSCSSTTTCEEEEECCGGGCSTTC----------------------------------------------------
T ss_pred cccccccccCCCceEEEEecccccccCC----------------------------------------------------
Confidence 1 46899999987665321
Q ss_pred ccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCc
Q 015874 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETK 297 (399)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
+..+...|+.+|.+.+.+++.+ ..+++++++|||.|.++....
T Consensus 182 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------------- 229 (267)
T 1sny_A 182 -TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------------- 229 (267)
T ss_dssp -CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------------------
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------------------
Confidence 0012357999999999998866 358999999999987643210
Q ss_pred cccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecC
Q 015874 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 298 ~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
...+..+++|+.++.++........ +..+++.+
T Consensus 230 --~~~~~~~~~a~~~~~~~~~~~~~~~-G~~~~~~g 262 (267)
T 1sny_A 230 --SAPLDVPTSTGQIVQTISKLGEKQN-GGFVNYDG 262 (267)
T ss_dssp --TCSBCHHHHHHHHHHHHHHCCGGGT-TCEECTTS
T ss_pred --CCCCCHHHHHHHHHHHHHhcCcCCC-CcEEccCC
Confidence 1236778999999999875332211 45555544
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=163.88 Aligned_cols=236 Identities=17% Similarity=0.163 Sum_probs=153.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ ... .....+
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-------~~~~~~ 63 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREENV---NETIKEI---------RAQ-------YPDAIL 63 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------HHH-------CTTCEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hhh-------CCCceE
Confidence 45788999999999999999999999999 5668888875432 1211111 111 012467
Q ss_pred EEEeccCCCCCCCCCchhhHHHH---hcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 88 TFVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~---~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
.++.+|++++ +....+ +.++|++||+||.... .+.++..+++|+.++..+++++.+. .+.
T Consensus 64 ~~~~~D~~~~-------~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 136 (267)
T 3t4x_A 64 QPVVADLGTE-------QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKE 136 (267)
T ss_dssp EEEECCTTSH-------HHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTE
T ss_pred EEEecCCCCH-------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 8899999953 333333 3479999999997532 2567778999999998888876552 356
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 137 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 160 (267)
T 3t4x_A 137 GRVIFIASEAAIMPS--------------------------------------------------------QEMAHYSAT 160 (267)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEEcchhhccCC--------------------------------------------------------CcchHHHHH
Confidence 789999998755321 223579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
|.+.+.+.+.+ ..++++..++||.|.++..... ..... ................ ........+.+.+|
T Consensus 161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~ped 235 (267)
T 3t4x_A 161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTSIIQRLIRPEE 235 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTCSSCSCBCTHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCcccccCccCHHH
Confidence 99999998876 3579999999999877432000 00000 0000000111111100 01112356889999
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++..... .-.|..+++.++
T Consensus 236 vA~~v~fL~s~~~~-~itG~~i~vdGG 261 (267)
T 3t4x_A 236 IAHLVTFLSSPLSS-AINGSALRIDGG 261 (267)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCcccc-CccCCeEEECCC
Confidence 99999998874322 223789999887
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=161.16 Aligned_cols=220 Identities=12% Similarity=0.055 Sum_probs=148.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+ + .++.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~----------~~~~~ 53 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGPL---REAAE-------------A----------VGAHP 53 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-------------T----------TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------H----------cCCEE
Confidence 578999999999999999999999999 5668888864321 11111 0 13778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 54 ~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 133 (245)
T 1uls_A 54 VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL 133 (245)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 8999996432111111111223469999999997532 2457788999999999999988663 24678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...++. .....|+.+|...+
T Consensus 134 isS~~~~~~---------------------------------------------------------~~~~~Y~asK~a~~ 156 (245)
T 1uls_A 134 TASRVYLGN---------------------------------------------------------LGQANYAASMAGVV 156 (245)
T ss_dssp ECCGGGGCC---------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EccchhcCC---------------------------------------------------------CCchhHHHHHHHHH
Confidence 999873321 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++++++||.|.++.... +.. ......... .+ ...+++.+|+|++++.
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~------~~~~~~~~~----~p-----~~~~~~~~dvA~~v~~ 218 (245)
T 1uls_A 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAK---VPE------KVREKAIAA----TP-----LGRAGKPLEVAYAALF 218 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS---SCH------HHHHHHHHT----CT-----TCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh---cCH------HHHHHHHhh----CC-----CCCCcCHHHHHHHHHH
Confidence 888765 458999999999997764321 100 111111110 11 1236789999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++...... -.+..+++.++
T Consensus 219 l~s~~~~~-~tG~~~~vdgG 237 (245)
T 1uls_A 219 LLSDESSF-ITGQVLFVDGG 237 (245)
T ss_dssp HHSGGGTT-CCSCEEEESTT
T ss_pred HhCchhcC-CcCCEEEECCC
Confidence 88643222 22788988876
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=169.81 Aligned_cols=211 Identities=14% Similarity=0.128 Sum_probs=141.8
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|...+.+|+||||||+|+||+++++.|+++|+ +|.+..|+.+.... ....
T Consensus 10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~---------------------------~~~~ 59 (266)
T 3p19_A 10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGH---PLLLLARRVERLKA---------------------------LNLP 59 (266)
T ss_dssp -----CCCEEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCHHHHHT---------------------------TCCT
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHH---------------------------hhcC
Confidence 34457789999999999999999999999995 55788886432100 0124
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..
T Consensus 60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g 139 (266)
T 3p19_A 60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG 139 (266)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 78899999996432111111222233479999999997532 2567788999999999988877542 2567
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 140 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 163 (266)
T 3p19_A 140 TIINISSIAGKKTF--------------------------------------------------------PDHAAYCGTK 163 (266)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEEcChhhCCCC--------------------------------------------------------CCCchHHHHH
Confidence 99999998755421 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.+ ..|++++.++||.|.++...... . . ........ . .. ....+++.+|+|+
T Consensus 164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~--~---~~~~~~~~-~--~~-----~~~r~~~pedvA~ 227 (266)
T 3p19_A 164 FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---S--Q---QIKDGYDA-W--RV-----DMGGVLAADDVAR 227 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---C--H---HHHHHHHH-H--HH-----HTTCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---c--h---hhhHHHHh-h--cc-----cccCCCCHHHHHH
Confidence 9999988766 46899999999999886542110 1 0 00110000 0 00 1234788999999
Q ss_pred HHHHHHHh
Q 015874 311 AMIVAMVA 318 (399)
Q Consensus 311 ~i~~~~~~ 318 (399)
+++.++..
T Consensus 228 av~~l~~~ 235 (266)
T 3p19_A 228 AVLFAYQQ 235 (266)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHcC
Confidence 99999974
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=165.97 Aligned_cols=230 Identities=15% Similarity=0.106 Sum_probs=153.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL-RFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..++||+|+||||+|+||.++++.|+++| .+|.+..|+.+...... .+.+ .+.+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~----------------------~~~~ 83 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAG---AHVILHGVKPGSTAAVQQRIIA----------------------SGGT 83 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSTTTTHHHHHHHHH----------------------TTCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHh----------------------cCCe
Confidence 45789999999999999999999999999 56788889876543221 1111 1367
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.++.+|+++++......+...+. .++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 84 ~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 162 (275)
T 4imr_A 84 AQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGR 162 (275)
T ss_dssp EEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 899999999754321111212112 479999999997432 2567888999999999999988542 25678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.||.
T Consensus 163 Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 186 (275)
T 4imr_A 163 VVSIGSINQLRPK--------------------------------------------------------SVVTAYAATKA 186 (275)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEECCHHhCCCC--------------------------------------------------------CCchhhHHHHH
Confidence 9999998654421 12346999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+.+ ..++++..++||.|.++.... .. ............. . .....+...+|+|++
T Consensus 187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~---~~~~~~~~~~~~~----~----~p~~r~~~pedvA~~ 252 (275)
T 4imr_A 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD---RR---AQDPEGWDEYVRT----L----NWMGRAGRPEEMVGA 252 (275)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH---HH---HHCHHHHHHHHHH----H----STTCSCBCGGGGHHH
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeccccCccccc---cc---ccChHHHHHHHhh----c----CccCCCcCHHHHHHH
Confidence 999998866 458999999999997743200 00 0000011111110 0 011235667899999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... --.|..+++.++
T Consensus 253 v~fL~s~~a~-~itG~~i~vdGG 274 (275)
T 4imr_A 253 ALFLASEACS-FMTGETIFLTGG 274 (275)
T ss_dssp HHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHcCcccC-CCCCCEEEeCCC
Confidence 9998864322 223788888775
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=165.64 Aligned_cols=244 Identities=15% Similarity=0.099 Sum_probs=157.1
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc---------ccHHHHHHHHHhhhhhHHHHHhhh
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI---------DSAALRFQNEVLAKDVFNVLKEKW 75 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~ 75 (399)
.|...++||+||||||+|+||.++++.|+++| .+|.++.|+... ...++...+++ .
T Consensus 21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--- 85 (299)
T 3t7c_A 21 SMAGKVEGKVAFITGAARGQGRSHAITLAREG---ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV---------E--- 85 (299)
T ss_dssp -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHH---------H---
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecccccccccccccCHHHHHHHHHHH---------H---
Confidence 34556889999999999999999999999999 566888876321 11222222111 0
Q ss_pred cccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHH
Q 015874 76 GTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNF 147 (399)
Q Consensus 76 ~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~ 147 (399)
..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.+++++
T Consensus 86 ------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 159 (299)
T 3t7c_A 86 ------ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARV 159 (299)
T ss_dssp ------HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ------hcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 013678999999996442111111222233479999999997532 256788899999999999998
Q ss_pred HHhc----cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 148 AKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 148 a~~~----~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
+... ++..+||++||...+...
T Consensus 160 ~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------ 185 (299)
T 3t7c_A 160 AIPHIMAGKRGGSIVFTSSIGGLRGA------------------------------------------------------ 185 (299)
T ss_dssp HHHHHHHTTSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCcEEEEECChhhccCC------------------------------------------------------
Confidence 7653 235789999998654321
Q ss_pred cCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCC---cccC--cchHHHHHHHhhcCcccccc
Q 015874 224 LHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG---WVED--LKTINTLFVASAQGNLRCLV 293 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~ 293 (399)
.....|+.||.+.+.+.+.+ ..|+++..++||.|.++....... +... ......+..... .
T Consensus 186 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~- 256 (299)
T 3t7c_A 186 --ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR------Q- 256 (299)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH------H-
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh------h-
Confidence 12357999999999998866 458999999999998865421000 0000 000000000000 0
Q ss_pred CCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 294 ~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..... ..+...+|+|++++.++..... --.|..+++.++
T Consensus 257 ~~~~p-~r~~~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 295 (299)
T 3t7c_A 257 MHVLP-IPYVEPADISNAILFLVSDDAR-YITGVSLPVDGG 295 (299)
T ss_dssp HSSSS-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred hcccC-cCCCCHHHHHHHHHHHhCcccc-cCcCCEEeeCCC
Confidence 00011 3577899999999999864322 223789999887
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-18 Score=158.82 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=148.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||++++++|+++| ++|.++.|+.+. ..+++ ++.++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G---~~V~~~~r~~~~------~~~~~-----------------------~~~~~~ 49 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARG---YRVAIASRNPEE------AAQSL-----------------------GAVPLP 49 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH------HHHHH-----------------------TCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH------HHHhh-----------------------CcEEEe
Confidence 5899999999999999999999999 567888887643 11111 267889
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~S 161 (399)
+|+++ +......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+..+||++|
T Consensus 50 ~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~is 128 (239)
T 2ekp_A 50 TDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIG 128 (239)
T ss_dssp CCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred cCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 99997 42111111122234579999999997532 2467888999999999999987542 2568999999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+.... ..+...|+.+|...+.+
T Consensus 129 S~~~~~~~~------------------------------------------------------~~~~~~Y~~sK~a~~~~ 154 (239)
T 2ekp_A 129 SVTTFTAGG------------------------------------------------------PVPIPAYTTAKTALLGL 154 (239)
T ss_dssp CGGGTSCCT------------------------------------------------------TSCCHHHHHHHHHHHHH
T ss_pred chhhccCCC------------------------------------------------------CCCCccHHHHHHHHHHH
Confidence 987665320 01235799999999998
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.+ ..+++++++|||.|.++.... .... ......... . .....+...+|+|++++.++
T Consensus 155 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~----~~~~~~~~~-~--------~p~~~~~~~~dvA~~~~~l~ 218 (239)
T 2ekp_A 155 TRALAKEWARLGIRVNLLCPGYVETEFTLP---LRQN----PELYEPITA-R--------IPMGRWARPEEIARVAAVLC 218 (239)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTC----HHHHHHHHT-T--------CTTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHhhhcCcEEEEEEeCCccCchhhc---cccC----HHHHHHHHh-c--------CCCCCCcCHHHHHHHHHHHc
Confidence 8766 358999999999998754310 0000 011111111 0 01234788999999999988
Q ss_pred HhccCCCCCCcEEEecCC
Q 015874 317 VAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~ 334 (399)
..... .-.+..+++.++
T Consensus 219 s~~~~-~~tG~~~~vdgG 235 (239)
T 2ekp_A 219 GDEAE-YLTGQAVAVDGG 235 (239)
T ss_dssp SGGGT-TCCSCEEEESTT
T ss_pred Cchhc-CCCCCEEEECCC
Confidence 63222 122778888876
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=159.00 Aligned_cols=209 Identities=11% Similarity=0.082 Sum_probs=143.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++|+|+||||+|+||++++++|+++| ++|.++.|+.... .....+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~-------------------------------~~~~~~ 46 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQ-------------------------------ADSNIL 46 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTT-------------------------------SSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecCcccc-------------------------------ccccEE
Confidence 467899999999999999999999999 5678888886542 123567
Q ss_pred EeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v 158 (399)
+.+|+++++......+...+.+ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 47 ~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 126 (236)
T 1ooe_A 47 VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQ 126 (236)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred EeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEE
Confidence 8899995321110111111122 479999999996431 2456788999999999999998763 2235899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 127 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 150 (236)
T 1ooe_A 127 LTGAAAAMGPT--------------------------------------------------------PSMIGYGMAKAAV 150 (236)
T ss_dssp EECCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EECchhhccCC--------------------------------------------------------CCcHHHHHHHHHH
Confidence 99998755321 1235799999999
Q ss_pred HHHHHHh--h-----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS--K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~--~-----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+++.+ + .++++++++||.|.++.. ..... . .....+++.+|+|++
T Consensus 151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----------------~~~~~-~--------~~~~~~~~~~dvA~~ 204 (236)
T 1ooe_A 151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----------------RKWMP-N--------ADHSSWTPLSFISEH 204 (236)
T ss_dssp HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----------------HHHST-T--------CCGGGCBCHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeEEEEEecCcccCcch-----------------hhcCC-C--------ccccccCCHHHHHHH
Confidence 9999876 2 259999999999877321 11000 0 012345778999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++.......-.+..+++.++
T Consensus 205 i~~~l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 205 LLKWTTETSSRPSSGALLKITTE 227 (236)
T ss_dssp HHHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHHHcCCCcccccccEEEEecC
Confidence 99777433322223678888765
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.8e-19 Score=169.94 Aligned_cols=241 Identities=13% Similarity=0.078 Sum_probs=153.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc---------ccHHHHHHHHHhhhhhHHHHHhhhccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI---------DSAALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
..++||+||||||+|+||+++++.|+++| .+|.++.|+... ...++...+.+ .
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~------ 103 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDG---ADIVAIDLCRQQPNLDYAQGSPEELKETVRLV---------E------ 103 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHH---------H------
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCC---CeEEEEecccccccccccccCHHHHHHHHHHH---------H------
Confidence 45788999999999999999999999999 556777765321 11112211111 0
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+.
T Consensus 104 ---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 180 (317)
T 3oec_A 104 ---EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS 180 (317)
T ss_dssp ---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---hcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 013578999999996432111111111223479999999997642 2567888999999999999988653
Q ss_pred ---c-CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 152 ---V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 152 ---~-~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
+ ...+||++||...+... ..
T Consensus 181 m~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~ 204 (317)
T 3oec_A 181 MIERGQGGSVIFVSSTVGLRGA--------------------------------------------------------PG 204 (317)
T ss_dssp HHHTCSCEEEEEECCGGGSSCC--------------------------------------------------------TT
T ss_pred HHHcCCCCEEEEECcHHhcCCC--------------------------------------------------------CC
Confidence 1 24679999998655421 12
Q ss_pred CchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc----cc-ccCCCc
Q 015874 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL----RC-LVGETK 297 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~ 297 (399)
...|+.||...+.+.+.+ ..|++++.++||.|.++.... ... ...+........ .. +.....
T Consensus 205 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (317)
T 3oec_A 205 QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN-------EKL-LKMFLPHLENPTREDAAELFSQLTL 276 (317)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC-------HHH-HHHHCTTCSSCCHHHHHHHHTTTCS
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc-------hhh-hhhhhhhccccchhHHHHHHhhhcc
Confidence 357999999999998876 358999999999998854210 000 000000000000 00 000011
Q ss_pred cccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 298 VIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 298 ~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
....+++.+|+|++++.++..... .-.|.++++.++
T Consensus 277 ~p~~~~~pedvA~av~fL~s~~a~-~itG~~i~vdGG 312 (317)
T 3oec_A 277 LPIPWVEPEDVSNAVAWLASDEAR-YIHGAAIPVDGG 312 (317)
T ss_dssp SSSSSBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHcCCccc-CCCCCEEEECcc
Confidence 125788999999999988864322 223789999887
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.2e-18 Score=157.36 Aligned_cols=218 Identities=16% Similarity=0.172 Sum_probs=144.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|+||||+|+||++++++|+++| .+|.+..|+.+... ...+++ ... .+.++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~---~~~~~~---------~~~--------~~~~~~~~ 57 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDG---YALALGARSVDRLE---KIAHEL---------MQE--------QGVEVFYH 57 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHHHHH---------HHH--------HCCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------Hhh--------cCCeEEEE
Confidence 47899999999999999999999999 55688888754322 221111 001 13688999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~S 161 (399)
.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..++|++|
T Consensus 58 ~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~s 137 (235)
T 3l77_A 58 HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTT 137 (235)
T ss_dssp ECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 999996432111111111223479999999997532 2567888999999999999988653 2345667766
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .....|+.+|++.+.+
T Consensus 138 S~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~~~~ 161 (235)
T 3l77_A 138 SDVSARLI--------------------------------------------------------PYGGGYVSTKWAARAL 161 (235)
T ss_dssp CGGGSSCC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred cchhcccC--------------------------------------------------------CCcchHHHHHHHHHHH
Confidence 65433211 1235799999999999
Q ss_pred HHHh---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 242 MQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 242 l~~~---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
.+.+ ..+++++.++||.|-++...... . ......++..+|+|++++.++..
T Consensus 162 ~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-------------------------~-~~~~~~~~~p~dva~~v~~l~~~ 215 (235)
T 3l77_A 162 VRTFQIENPDVRFFELRPGAVDTYFGGSKP-------------------------G-KPKEKGYLKPDEIAEAVRCLLKL 215 (235)
T ss_dssp HHHHHHHCTTSEEEEEEECSBSSSTTTCCS-------------------------C-CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred HHHHhhcCCCeEEEEEeCCccccccccccC-------------------------C-cccccCCCCHHHHHHHHHHHHcC
Confidence 9876 45899999999998765431110 0 01122567899999999999974
Q ss_pred ccCCCCCCcEEEecCC
Q 015874 319 HAKQPSDANIYHVGSS 334 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~ 334 (399)
..... .+.+....++
T Consensus 216 ~~~~~-~~~~~~~~~~ 230 (235)
T 3l77_A 216 PKDVR-VEELMLRSVY 230 (235)
T ss_dssp CTTCC-CCEEEECCTT
T ss_pred CCCCc-cceEEEeecc
Confidence 33322 2455544443
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-19 Score=167.89 Aligned_cols=223 Identities=13% Similarity=0.067 Sum_probs=151.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+ + ...++.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~-------------~--------~~~~~~ 55 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERLL---AEAVA-------------A--------LEAEAI 55 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-------------T--------CCSSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------H--------hcCceE
Confidence 3678999999999999999999999999 5668888875322 21111 1 114688
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. +...+||++
T Consensus 56 ~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 56 AVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 99999996432111111111223468999999997532 2456788999999999999998774 124689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...++. . ....|+.+|...+.
T Consensus 136 sS~~~~~~-~--------------------------------------------------------~~~~Y~asK~a~~~ 158 (263)
T 2a4k_A 136 GSVAGLGA-F--------------------------------------------------------GLAHYAAGKLGVVG 158 (263)
T ss_dssp CCCTTCCH-H--------------------------------------------------------HHHHHHHCSSHHHH
T ss_pred ecchhcCC-C--------------------------------------------------------CcHHHHHHHHHHHH
Confidence 99876621 1 02469999998888
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..|+++++++||.|.++..... . .......... . ....+.+.+|+|++++.+
T Consensus 159 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~------~~~~~~~~~~----~-----p~~~~~~p~dvA~~v~~l 220 (263)
T 2a4k_A 159 LARTLALELARKGVRVNVLLPGLIQTPMTAGL---P------PWAWEQEVGA----S-----PLGRAGRPEEVAQAALFL 220 (263)
T ss_dssp HHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---C------HHHHHHHHHT----S-----TTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---C------HHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHH
Confidence 88765 4589999999999988653211 0 0111111111 0 112468899999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+..... .-.+..+++.++
T Consensus 221 ~s~~~~-~~tG~~i~vdgG 238 (263)
T 2a4k_A 221 LSEESA-YITGQALYVDGG 238 (263)
T ss_dssp HSGGGT-TCCSCEEEESTT
T ss_pred hCcccc-CCcCCEEEECCC
Confidence 864322 222788999887
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=158.47 Aligned_cols=218 Identities=11% Similarity=0.092 Sum_probs=148.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++|+||||||+|+||+++++.|++ .| ..|.+..|+.... ..++.
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g---~~v~~~~~~~~~~-------------------------------~~~~~ 47 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKN---HTVINIDIQQSFS-------------------------------AENLK 47 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTT---EEEEEEESSCCCC-------------------------------CTTEE
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCC---cEEEEeccccccc-------------------------------cccce
Confidence 3678999999999999999999998 67 5567777765421 25678
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc-----CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~ 155 (399)
++.+|++++ +....+++ ++|++||+||.... .+.++..+++|+.++.++++++.+. .+..
T Consensus 48 ~~~~Dv~~~-------~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g 120 (244)
T 4e4y_A 48 FIKADLTKQ-------QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGA 120 (244)
T ss_dssp EEECCTTCH-------HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEE
T ss_pred EEecCcCCH-------HHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCc
Confidence 999999953 33333333 78999999997532 2567888999999999999998774 2225
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+... .....|+.||
T Consensus 121 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asK 144 (244)
T 4e4y_A 121 SIVFNGSDQCFIAK--------------------------------------------------------PNSFAYTLSK 144 (244)
T ss_dssp EEEEECCGGGTCCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEECCHHHccCC--------------------------------------------------------CCCchhHHHH
Confidence 89999998755421 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhc--CccccccCCCccccCeeeHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQ--GNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
...+.+.+.+ ..|+++++++||.|.++... . ........... ...............+.+.+|+
T Consensus 145 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv 215 (244)
T 4e4y_A 145 GAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR-------N--LIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEI 215 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH-------H--HHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH-------H--HHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHH
Confidence 9999998866 45899999999999774321 0 00000000000 0000000111223457889999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++..... .-.+..+++.++
T Consensus 216 A~~v~~l~s~~~~-~itG~~i~vdGG 240 (244)
T 4e4y_A 216 AELVIFLLSDKSK-FMTGGLIPIDGG 240 (244)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHhcCccc-cccCCeEeECCC
Confidence 9999999874332 222789999887
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-18 Score=160.38 Aligned_cols=240 Identities=11% Similarity=0.011 Sum_probs=154.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ ..+. ...++.
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~~-------~~~~~~ 62 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGERL---RAAESAL---------RQRF-------PGARLF 62 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHHS-------TTCCEE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HHhc-------CCceEE
Confidence 3678999999999999999999999999 5568888875432 2222111 1110 123588
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..+||
T Consensus 63 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (265)
T 3lf2_A 63 ASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIV 142 (265)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Confidence 99999996443111122222234579999999997532 2567888999999999999988653 2356899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 143 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 166 (265)
T 3lf2_A 143 CVNSLLASQPE--------------------------------------------------------PHMVATSAARAGV 166 (265)
T ss_dssp EEEEGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred EECCcccCCCC--------------------------------------------------------CCchhhHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCc-ccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGW-VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
+.+.+.+ ..|+++..++||.|.++........ .........+........ ......+...+|+|+++
T Consensus 167 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~pedvA~~v 239 (265)
T 3lf2_A 167 KNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNK-------QIPLGRLGKPIEAARAI 239 (265)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHT-------TCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhcc-------CCCcCCCcCHHHHHHHH
Confidence 9998766 4589999999999987532100000 000000001111110000 01123467899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... --.|..+++.++
T Consensus 240 ~fL~s~~~~-~itG~~i~vdGG 260 (265)
T 3lf2_A 240 LFLASPLSA-YTTGSHIDVSGG 260 (265)
T ss_dssp HHHHSGGGT-TCCSEEEEESSS
T ss_pred HHHhCchhc-CcCCCEEEECCC
Confidence 998864322 223789999887
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=160.73 Aligned_cols=220 Identities=11% Similarity=0.116 Sum_probs=146.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+||||||+|+||++++++|+++| .+|.++.|+.... .++ ...++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~------~~~---------------------~~~~~ 54 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAG---AQVVVLDIRGEDV------VAD---------------------LGDRA 54 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCHHH------HHH---------------------TCTTE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCchHHH------HHh---------------------cCCce
Confidence 34788999999999999999999999999 5668888843211 111 13678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----------ccccHHHHHHHhHHHHHHHHHHHHhc-----
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC----- 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----------~~~~~~~~~~~n~~~~~~ll~~a~~~----- 151 (399)
.++.+|+++++......+...+ +.++|++||+||... ..+.++..+++|+.++.++++++.+.
T Consensus 55 ~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 133 (257)
T 3tl3_A 55 RFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTE 133 (257)
T ss_dssp EEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhc
Confidence 9999999964421111111212 348999999999742 12557888999999999999988763
Q ss_pred ------cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 015874 152 ------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (399)
Q Consensus 152 ------~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (399)
.+..+||++||...+....
T Consensus 134 ~~~~~~~~~g~iv~isS~~~~~~~~------------------------------------------------------- 158 (257)
T 3tl3_A 134 PVGPNAEERGVIINTASVAAFDGQI------------------------------------------------------- 158 (257)
T ss_dssp CC--CCCCSEEEEEECCCC--CCHH-------------------------------------------------------
T ss_pred ccccccCCCcEEEEEcchhhcCCCC-------------------------------------------------------
Confidence 1235899999987654211
Q ss_pred CCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcccc
Q 015874 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (399)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
....|+.||...+.+.+.. ..+++++.++||.|.++..... .. ......... .+ ...
T Consensus 159 -~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~------~~~~~~~~~----~~----~~~ 220 (257)
T 3tl3_A 159 -GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PE------EARASLGKQ----VP----HPS 220 (257)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CH------HHHHHHHHT----SS----SSC
T ss_pred -CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cH------HHHHHHHhc----CC----CCC
Confidence 1246999999999888765 4689999999999987654211 00 111111111 10 013
Q ss_pred CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 301 ~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+.+.+|+|++++.++.. ... .+..+++.++
T Consensus 221 r~~~p~dva~~v~~l~s~-~~i--tG~~i~vdGG 251 (257)
T 3tl3_A 221 RLGNPDEYGALAVHIIEN-PML--NGEVIRLDGA 251 (257)
T ss_dssp SCBCHHHHHHHHHHHHHC-TTC--CSCEEEESTT
T ss_pred CccCHHHHHHHHHHHhcC-CCC--CCCEEEECCC
Confidence 578899999999999873 222 2789999887
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=160.83 Aligned_cols=209 Identities=10% Similarity=0.160 Sum_probs=138.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++|+|+||||+|+||++++++|+++|.. ++|.++.|+......+ .+ . ...++.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~~~l---~~-------------~--------~~~~~~~ 55 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKATEL---KS-------------I--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCHHH---HT-------------C--------CCTTEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHHHHH---Hh-------------c--------cCCceEE
Confidence 46789999999999999999999999821 2458888876543211 10 0 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhc---------CccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHHHhc-
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN---------ELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC- 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~---------~~D~Vih~Aa~~~-~-------~~~~~~~~~~n~~~~~~ll~~a~~~- 151 (399)
+.+|+++++ .+..+++ ++|+|||+||... . .+.++..+++|+.++.++++++.+.
T Consensus 56 ~~~D~~~~~-------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 128 (250)
T 1yo6_A 56 LPLTVTCDK-------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLL 128 (250)
T ss_dssp EECCTTCHH-------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred EEeecCCHH-------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999643 3323332 8999999999765 1 2457778999999999999887653
Q ss_pred --c------C-----CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc
Q 015874 152 --V------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (399)
Q Consensus 152 --~------~-----~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (399)
. + ..+||++||...+..... +.
T Consensus 129 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~~------------------------------------------ 163 (250)
T 1yo6_A 129 KNAASKESGDQLSVSRAAVITISSGLGSITDNT---SG------------------------------------------ 163 (250)
T ss_dssp HHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC---ST------------------------------------------
T ss_pred hhcccccCCCcccCCCcEEEEeccCccccCCcc---cc------------------------------------------
Confidence 1 2 678999999866543210 00
Q ss_pred ccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccccc
Q 015874 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV 293 (399)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (399)
.+..+...|+.+|.+.+.+++.+ ..++++++++||.|.++... .
T Consensus 164 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----------------------~----- 212 (250)
T 1yo6_A 164 ----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----------------------K----- 212 (250)
T ss_dssp ----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred ----cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC----------------------C-----
Confidence 00022357999999999998866 34899999999998764320 0
Q ss_pred CCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecC
Q 015874 294 GETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 294 ~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
..+++.+|+|+.++.++....... .+..+.+.+
T Consensus 213 ------~~~~~~~~~a~~~~~~~~~~~~~~-~G~~~~~~g 245 (250)
T 1yo6_A 213 ------NAALTVEQSTAELISSFNKLDNSH-NGRFFMRNL 245 (250)
T ss_dssp ------------HHHHHHHHHHHTTCCGGG-TTCEEETTE
T ss_pred ------CCCCCHHHHHHHHHHHHhcccccC-CCeEEEECC
Confidence 135788999999999997432211 144555543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-19 Score=166.22 Aligned_cols=202 Identities=13% Similarity=0.142 Sum_probs=140.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+|+||||+|+||+++++.|+++| .+|.++.|+.+.. +...+++ .. .+.++.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 83 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHGL---EETAAKC---------KG---------LGAKVH 83 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEEcCHHHH---HHHHHHH---------Hh---------cCCeEE
Confidence 4778999999999999999999999999 5678888865322 2222111 00 135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 84 ~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 163 (272)
T 1yb1_A 84 TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 163 (272)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999996432111111111223479999999997542 2456778999999999988877542 3568999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+.... ....|+.+|.+.
T Consensus 164 ~isS~~~~~~~~--------------------------------------------------------~~~~Y~~sK~a~ 187 (272)
T 1yb1_A 164 TVASAAGHVSVP--------------------------------------------------------FLLAYCSSKFAA 187 (272)
T ss_dssp EECCCC-CCCHH--------------------------------------------------------HHHHHHHHHHHH
T ss_pred EEechhhcCCCC--------------------------------------------------------CchhHHHHHHHH
Confidence 999987665311 124699999999
Q ss_pred HHHHHHh--h------CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 239 EMLMQQS--K------ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 239 E~~l~~~--~------~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+.+++.+ + .+++++++|||.|.++... . . . .....+++.+|+|+
T Consensus 188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-------~--------------~--~-----~~~~~~~~~~dva~ 239 (272)
T 1yb1_A 188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-------N--------------P--S-----TSLGPTLEPEEVVN 239 (272)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-------C--------------T--H-----HHHCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-------c--------------c--c-----ccccCCCCHHHHHH
Confidence 9998765 2 3799999999999875421 0 0 0 01235688999999
Q ss_pred HHHHHHHh
Q 015874 311 AMIVAMVA 318 (399)
Q Consensus 311 ~i~~~~~~ 318 (399)
+++.++..
T Consensus 240 ~i~~~~~~ 247 (272)
T 1yb1_A 240 RLMHGILT 247 (272)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999974
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=159.24 Aligned_cols=195 Identities=17% Similarity=0.148 Sum_probs=129.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||+|+||++++++|+++| ++|.++.|+... .+.+.+++ .++.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~~---~~~~~~~~----------------------~~~~~~ 55 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKG---YRVGLMARDEKR---LQALAAEL----------------------EGALPL 55 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHS----------------------TTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh----------------------hhceEE
Confidence 35789999999999999999999999 566888886432 22222111 267889
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHV 160 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~ 160 (399)
.+|+++++......+.....+.++|+|||+||.... .+.++..+++|+.++.++++.+.+. .+..+||++
T Consensus 56 ~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~i 135 (234)
T 2ehd_A 56 PGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNV 135 (234)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 999996432111111111223479999999997532 2457788999999998777765432 256899999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|...+.
T Consensus 136 sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~ 159 (234)
T 2ehd_A 136 GSLAGKNPF--------------------------------------------------------KGGAAYNASKFGLLG 159 (234)
T ss_dssp CCTTTTSCC--------------------------------------------------------TTCHHHHHHHHHHHH
T ss_pred CCchhcCCC--------------------------------------------------------CCCchhhHHHHHHHH
Confidence 998755421 123579999999998
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.+ ..+++++++|||.|.++... . . . . . ..+++.+|+|++++.+
T Consensus 160 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~-------~----~-~--~--------~~~~~~~dvA~~~~~l 210 (234)
T 2ehd_A 160 LAGAAMLDLREANVRVVNVLPGSVDTGFAG-------N-------T----P-G--Q--------AWKLKPEDVAQAVLFA 210 (234)
T ss_dssp HHHHHHHHHGGGTEEEEEEECC---------------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcCCccc-------c-------c----c-c--c--------cCCCCHHHHHHHHHHH
Confidence 88765 45899999999988764321 0 0 0 0 0 0147899999999999
Q ss_pred HHh
Q 015874 316 MVA 318 (399)
Q Consensus 316 ~~~ 318 (399)
+..
T Consensus 211 ~~~ 213 (234)
T 2ehd_A 211 LEM 213 (234)
T ss_dssp HHS
T ss_pred hCC
Confidence 874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=164.32 Aligned_cols=227 Identities=13% Similarity=0.103 Sum_probs=150.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|+||++++++|+++| .+|++.+|+..+. +...+ + ...++.
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~---~~~~~-------------~--------~~~~~~ 65 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDTRKG---EAAAR-------------T--------MAGQVE 65 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHT-------------T--------SSSEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH-------------H--------hcCCee
Confidence 4788999999999999999999999999 5678888875432 11111 1 135889
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
++.+|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++.+. -.++||++
T Consensus 66 ~~~~Dl~d-------~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~i 137 (291)
T 3rd5_A 66 VRELDLQD-------LSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTV 137 (291)
T ss_dssp EEECCTTC-------HHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEE
T ss_pred EEEcCCCC-------HHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEe
Confidence 99999995 444445554 68999999997642 3567889999999999999999885 45699999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+..... ..+..... .+..+...|+.||.+.+.
T Consensus 138 sS~~~~~~~~~---~~~~~~~~----------------------------------------~~~~~~~~Y~~sK~a~~~ 174 (291)
T 3rd5_A 138 SSMAHWPGRIN---LEDLNWRS----------------------------------------RRYSPWLAYSQSKLANLL 174 (291)
T ss_dssp CCGGGTTCCCC---SSCTTCSS----------------------------------------SCCCHHHHHHHHHHHHHH
T ss_pred echhhccCCCC---cccccccc----------------------------------------cCCCCcchHHHHHHHHHH
Confidence 99877653211 11110000 011223579999999999
Q ss_pred HHHHh-----hCC--CcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 241 LMQQS-----KEN--LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 241 ~l~~~-----~~~--~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+ ..+ ++++.++||.|.++...... .. ...... .. ...+-..+.+|+|++++
T Consensus 175 ~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~---~~-------~~~~~~----~~----~~~~~~~~~~~~A~~~~ 236 (291)
T 3rd5_A 175 FTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG---RK-------LGDALM----SA----ATRVVATDADFGARQTL 236 (291)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc---hH-------HHHHHH----HH----HHHHHhCCHHHHHHHHH
Confidence 98766 345 99999999999776542111 00 000000 00 01122345899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.. ... .+..+++.++
T Consensus 237 ~l~~~-~~~--~G~~~~vdgG 254 (291)
T 3rd5_A 237 YAASQ-DLP--GDSFVGPRFG 254 (291)
T ss_dssp HHHHS-CCC--TTCEEEETTS
T ss_pred HHHcC-CCC--CCceeCCccc
Confidence 99885 222 2678887654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=161.74 Aligned_cols=228 Identities=14% Similarity=0.085 Sum_probs=149.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+|+||||+|+||++++++|+++| ++|.+..|+.+.. +...+++ .++.
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~----------------------~~~~ 57 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESGG---RALEQEL----------------------PGAV 57 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHC----------------------TTEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHh----------------------cCCe
Confidence 4688999999999999999999999999 5568888865322 2222111 3478
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ....+||
T Consensus 58 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv 137 (270)
T 1yde_A 58 FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVI 137 (270)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEE
Confidence 89999996432111111111223479999999997531 2457788999999999999988652 1357899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 138 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 161 (270)
T 1yde_A 138 NISSLVGAIGQ--------------------------------------------------------AQAVPYVATKGAV 161 (270)
T ss_dssp EECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEcCccccCCC--------------------------------------------------------CCCcccHHHHHHH
Confidence 99997543211 1135799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.+ ..|+++++++||.|+++........... ....+..... .. ....+...+|+|++++
T Consensus 162 ~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~----~~-----p~~r~~~p~dva~~v~ 229 (270)
T 1yde_A 162 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPD---PRASIREGML----AQ-----PLGRMGQPAEVGAAAV 229 (270)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSS---HHHHHHHHHH----TS-----TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccc---hHHHHHHHhh----cC-----CCCCCcCHHHHHHHHH
Confidence 9998876 3689999999999988532100000000 0000111000 00 1123578899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.. . ..-.+..+++.++
T Consensus 230 ~L~s~-~-~~itG~~i~vdGG 248 (270)
T 1yde_A 230 FLASE-A-NFCTGIELLVTGG 248 (270)
T ss_dssp HHHHH-C-TTCCSCEEEESTT
T ss_pred HHccc-C-CCcCCCEEEECCC
Confidence 88874 2 2223788999888
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=163.25 Aligned_cols=210 Identities=14% Similarity=0.079 Sum_probs=135.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+||||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ ..++.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 77 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAG---YGVALAGRRLDAL---QETAAEI---------------------GDDAL 77 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------TSCCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHh---------------------CCCeE
Confidence 4678999999999999999999999999 5668888865332 2222111 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC--Cc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK--LK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~--~~ 155 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+ ..
T Consensus 78 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 157 (272)
T 4dyv_A 78 CVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG 157 (272)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999996432111111111223489999999997532 2457888999999999999887653 12 46
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 158 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 181 (272)
T 4dyv_A 158 RIINNGSISATSPR--------------------------------------------------------PYSAPYTATK 181 (272)
T ss_dssp EEEEECCSSTTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECchhhcCCC--------------------------------------------------------CCchHHHHHH
Confidence 89999998654321 2235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+.+.+ ..++++..++||.|.++...... .. ... .. .......++..+|+|+
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~-------~~~-------~~--~~~~~~~~~~pedvA~ 242 (272)
T 4dyv_A 182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK---AG-------VPQ-------AD--LSIKVEPVMDVAHVAS 242 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------CHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc---cc-------chh-------hh--hcccccCCCCHHHHHH
Confidence 9999998866 45899999999999875432110 00 000 00 0012234789999999
Q ss_pred HHHHHHHhcc
Q 015874 311 AMIVAMVAHA 320 (399)
Q Consensus 311 ~i~~~~~~~~ 320 (399)
+++.++....
T Consensus 243 ~v~fL~s~~~ 252 (272)
T 4dyv_A 243 AVVYMASLPL 252 (272)
T ss_dssp HHHHHHHSCT
T ss_pred HHHHHhCCCC
Confidence 9999998543
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=161.46 Aligned_cols=202 Identities=12% Similarity=0.056 Sum_probs=143.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+|+||||+|+||+++++.|+++| .+|.++.|+.... ....+.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---------------------------------~~~~~~ 65 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKS---WNTISIDFRENPN---------------------------------ADHSFT 65 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------------SSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc---------------------------------cccceE
Confidence 5899999999999999999999999 5678899987543 113467
Q ss_pred ccCCCCCCCCCchhhHHHH---hcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~---~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
+|+++++. ..+....+ +.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+||+
T Consensus 66 ~d~~d~~~---v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 142 (251)
T 3orf_A 66 IKDSGEEE---IKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVL 142 (251)
T ss_dssp CSCSSHHH---HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeCCHHH---HHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEE
Confidence 78885332 11122122 2358999999996421 2567788999999999999998774 23358999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|.+.+
T Consensus 143 isS~~~~~~~--------------------------------------------------------~~~~~Y~~sKaa~~ 166 (251)
T 3orf_A 143 TGASAALNRT--------------------------------------------------------SGMIAYGATKAATH 166 (251)
T ss_dssp ECCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred EechhhccCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9998755321 12357999999999
Q ss_pred HHHHHh--h-----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS--K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~--~-----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+ + .++++.+++||.|.++.. ..... ......+++.+|+|+++
T Consensus 167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------------~~~~~---------~~~~~~~~~~~dva~~i 220 (251)
T 3orf_A 167 HIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------------RKYMS---------DANFDDWTPLSEVAEKL 220 (251)
T ss_dssp HHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------------HHHCT---------TSCGGGSBCHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------------hhhcc---------cccccccCCHHHHHHHH
Confidence 999876 3 479999999998866321 11111 11234678899999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..+....-.|..+++.++
T Consensus 221 ~~l~~~~~~~~~tG~~i~v~~g 242 (251)
T 3orf_A 221 FEWSTNSDSRPTNGSLVKFETK 242 (251)
T ss_dssp HHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHhcCccccCCcceEEEEecC
Confidence 9999851222223788988776
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=166.42 Aligned_cols=226 Identities=13% Similarity=0.076 Sum_probs=150.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.+.+|+||||||+|+||.++++.|+++| .+|.++. |+.+.. +...+++ ... .+.++
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G---~~Vv~~~~r~~~~~---~~~~~~l---------~~~--------~~~~~ 99 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEA---NALSATL---------NAR--------RPNSA 99 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHH---HHHHHHH---------HHH--------STTCE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCCHHHH---HHHHHHH---------Hhh--------cCCeE
Confidence 3778999999999999999999999999 5568888 764322 2222211 000 12578
Q ss_pred EEEeccCCCCC-----------------CCCCchhhHHHHhcCccEEEEcccccCc---------------------ccc
Q 015874 88 TFVPGDISSED-----------------LGLKDSNLKEELWNELDIMVNSAAITKF---------------------DER 129 (399)
Q Consensus 88 ~~~~gDl~~~~-----------------~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------------------~~~ 129 (399)
.++.+|+++++ ......+...+.+.++|+|||+||.... .+.
T Consensus 100 ~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 179 (328)
T 2qhx_A 100 ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETA 179 (328)
T ss_dssp EEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHH
T ss_pred EEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHH
Confidence 89999999765 2111111111223479999999997532 344
Q ss_pred HHHHHHHhHHHHHHHHHHHHhc---cC------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhh
Q 015874 130 YDVAFGINTLGVIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNEL 200 (399)
Q Consensus 130 ~~~~~~~n~~~~~~ll~~a~~~---~~------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (399)
++..+++|+.++.++++++.+. .+ ..+||++||...+...
T Consensus 180 ~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------- 228 (328)
T 2qhx_A 180 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------- 228 (328)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC-------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC-------------------------------
Confidence 5677999999999999987653 23 5789999998654321
Q ss_pred hhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcc
Q 015874 201 KTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK 275 (399)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~ 275 (399)
.....|+.+|.+.+.+.+.+ ..++++++++||.|.++. ...
T Consensus 229 -------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-------- 274 (328)
T 2qhx_A 229 -------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-------- 274 (328)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC--------
T ss_pred -------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc--------
Confidence 12357999999999998866 358999999999998765 111
Q ss_pred hHHHHHHHhhcCccccccCCCcccc-CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 276 TINTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.......... .+ .. .+...+|+|++++.++..... .-.+..+++.++
T Consensus 275 --~~~~~~~~~~----~p-----~~~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 322 (328)
T 2qhx_A 275 --PAVWEGHRSK----VP-----LYQRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 322 (328)
T ss_dssp --HHHHHHHHTT----CT-----TTTSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred --HHHHHHHHhh----CC-----CCCCCCCHHHHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 0111121111 11 11 367899999999999863222 222788999886
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-18 Score=158.88 Aligned_cols=233 Identities=13% Similarity=0.137 Sum_probs=149.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
||+|+||||+|+||++++++|+++|.. ..|.+..|+.+. .+.+.+++ +.++.++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~~~---~~~~~~~~---------------------~~~~~~~~ 56 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSEAP---LKKLKEKY---------------------GDRFFYVV 56 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCHHH---HHHHHHHH---------------------GGGEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCHHH---HHHHHHHh---------------------CCceEEEE
Confidence 589999999999999999999999754 356777776432 22222211 35789999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~S 161 (399)
+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. +...++|++|
T Consensus 57 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~is 136 (254)
T 3kzv_A 57 GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVS 136 (254)
T ss_dssp SCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 99996432111111122223479999999997432 2567888999999999999988542 1227899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|...+... .....|+.||...+.+
T Consensus 137 S~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~~ 160 (254)
T 3kzv_A 137 SDACNMYF--------------------------------------------------------SSWGAYGSSKAALNHF 160 (254)
T ss_dssp CSCCCCSS--------------------------------------------------------CCSHHHHHHHHHHHHH
T ss_pred CchhccCC--------------------------------------------------------CCcchHHHHHHHHHHH
Confidence 98765421 2235799999999999
Q ss_pred HHHh---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 242 MQQS---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 242 l~~~---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
.+.+ ..++++..++||.|.++........................ ......+...+|+|++++.++..
T Consensus 161 ~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~~p~dva~~v~~L~s~ 231 (254)
T 3kzv_A 161 AMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG---------LKENNQLLDSSVPATVYAKLALH 231 (254)
T ss_dssp HHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH---------HHTTC----CHHHHHHHHHHHHH
T ss_pred HHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH---------HHhcCCcCCcccHHHHHHHHHhh
Confidence 9876 35899999999999987653221110000000111111111 01123467889999999998875
Q ss_pred ccCCCCCCcEEEecCC
Q 015874 319 HAKQPSDANIYHVGSS 334 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~ 334 (399)
.....-.|..+++.++
T Consensus 232 ~~~~~itG~~i~vdg~ 247 (254)
T 3kzv_A 232 GIPDGVNGQYLSYNDP 247 (254)
T ss_dssp CCCGGGTTCEEETTCG
T ss_pred cccCCCCccEEEecCc
Confidence 4211122778888775
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=159.41 Aligned_cols=233 Identities=10% Similarity=0.034 Sum_probs=142.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||+++++.|+++| ++|+++.|+..+.. . . +.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~-------------------------------~--~-~~~ 44 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEVI-------------------------------A--D-LST 44 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSEE-------------------------------C--C-TTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhhc-------------------------------c--c-ccc
Confidence 689999999999999999999999 56788888765420 1 1 567
Q ss_pred cCCCCCCCCCchhhHHHHh----cCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEeccee
Q 015874 93 DISSEDLGLKDSNLKEELW----NELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYV 165 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~----~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS~~v 165 (399)
|++ +.+.+..++ .++|+|||+||.......++..+++|+.++.++++++.+. .+..+||++||...
T Consensus 45 Dl~-------~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 45 AEG-------RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp HHH-------HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCC-------CHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 888 444444554 4569999999986645568899999999999999988653 24579999999987
Q ss_pred ecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+..... ...+..+.+ .+. .....+.+.. .+......|+.||.+.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~~~---~~~---------------------~~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~ 168 (257)
T 1fjh_A 118 AHLAFDKNPLALALEA---GEE---------------------AKARAIVEHA-----GEQGGNLAYAGSKNALTVAVRK 168 (257)
T ss_dssp GSSCGGGCTTHHHHHH---TCH---------------------HHHHHHHHTC-----CTTHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccchhhhhhcc---cch---------------------hhhhhhhhcc-----cCCCCccHHHHHHHHHHHHHHH
Confidence 742110 000000000 000 0000000000 0011235799999999999986
Q ss_pred h-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 245 S-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 245 ~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
+ ..++++++++||.|.++..... ... ........ .+ ......+++.+|+|++++.++...
T Consensus 169 la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-----~~~~~~~~----~~---~~~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 169 RAAAWGEAGVRLNTIAPGATETPLLQAG---LQD-----PRYGESIA----KF---VPPMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp THHHHHHTTCEEEEEEECC---------------------------------C---CCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHHhhcCeEEEEEeeCCCCCccchhh---ccc-----hhHHHHHH----hc---ccccCCCCCHHHHHHHHHHHhCch
Confidence 6 3689999999999988654210 000 00000000 00 011224788999999999988643
Q ss_pred cCCCCCCcEEEecCC
Q 015874 320 AKQPSDANIYHVGSS 334 (399)
Q Consensus 320 ~~~~~~~~~yni~~~ 334 (399)
.. .-.+..+++.++
T Consensus 234 ~~-~~tG~~~~vdgG 247 (257)
T 1fjh_A 234 AS-YVHGAQIVIDGG 247 (257)
T ss_dssp GT-TCCSCEEEESTT
T ss_pred hc-CCcCCEEEECCC
Confidence 22 222788988886
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.77 E-value=9e-19 Score=163.14 Aligned_cols=211 Identities=15% Similarity=0.165 Sum_probs=130.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||++++++|++ | ..|.++.|+.... +...+ ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g---~~v~~~~r~~~~~---~~~~~-----------------------~~~~~~ 52 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-D---HIVYALGRNPEHL---AALAE-----------------------IEGVEP 52 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-T---SEEEEEESCHHHH---HHHHT-----------------------STTEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-C---CeEEEEeCCHHHH---HHHHh-----------------------hcCCcc
Confidence 5789999999999999999999987 7 5678888865322 11110 146888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
+.+|+++........+.. ..+.++|+|||+||.... .+.++..+++|+.++.++++++.+. +...++|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i 131 (245)
T 3e9n_A 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYI 131 (245)
T ss_dssp EECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 999988643211111111 223579999999997642 2457788999999999998887652 123689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+... .....|+.+|.+.+.
T Consensus 132 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 132 NSGAGNGPH--------------------------------------------------------PGNTIYAASKHALRG 155 (245)
T ss_dssp C------------------------------------------------------------------CHHHHHHHHHHHH
T ss_pred cCcccccCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998766532 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+++.+ ..++++++++||.|.++.... +.. . . ........+++.+|+|++++.+
T Consensus 156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~----------~----~-----~~~~~~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQG---LMD----------S----Q-----GTNFRPEIYIEPKEIANAIRFV 213 (245)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEecCCccCchhhh---hhh----------h----h-----hcccccccCCCHHHHHHHHHHH
Confidence 98866 368999999999998864311 000 0 0 0001123478899999999999
Q ss_pred HHhccCCCCCCcEEEecC
Q 015874 316 MVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~ 333 (399)
+..... +.+||+.=
T Consensus 214 ~~~~~~----~~~~~i~~ 227 (245)
T 3e9n_A 214 IDAGET----TQITNVDV 227 (245)
T ss_dssp HTSCTT----EEEEEEEE
T ss_pred HcCCCc----cceeeeEE
Confidence 974322 56777643
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-18 Score=159.96 Aligned_cols=199 Identities=11% Similarity=0.076 Sum_probs=136.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+|+||||||+|+||++++++|+++| .+|.+..|+.+.. +...+++ ..++.+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~~ 53 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERG---HQVSMMGRRYQRL---QQQELLL---------------------GNAVIG 53 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------GGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHh---------------------cCCceE
Confidence 457899999999999999999999999 5678888875432 2222111 136889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. ....++|++
T Consensus 54 ~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~i 133 (235)
T 3l6e_A 54 IVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANV 133 (235)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999996432111111111223478999999997532 2567888999999999999988653 122389999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||...+.... ....|+.||...+.
T Consensus 134 sS~~~~~~~~--------------------------------------------------------~~~~Y~asKaa~~~ 157 (235)
T 3l6e_A 134 LSSAAQVGKA--------------------------------------------------------NESLYCASKWGMRG 157 (235)
T ss_dssp CCEECCSSCS--------------------------------------------------------SHHHHHHHHHHHHH
T ss_pred eCHHhcCCCC--------------------------------------------------------CCcHHHHHHHHHHH
Confidence 9986544211 12579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.+ ..|+++..++||.|-++..... . . .....++..+|+|++++.+
T Consensus 158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------------------~-~--------~~~~~~~~pedvA~~v~~l 210 (235)
T 3l6e_A 158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNT------------------D-H--------VDPSGFMTPEDAAAYMLDA 210 (235)
T ss_dssp HHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCEEEEEeCCCccCcchhcc------------------C-C--------CCCcCCCCHHHHHHHHHHH
Confidence 98866 4589999999999866432100 0 0 0112568899999999998
Q ss_pred HHh
Q 015874 316 MVA 318 (399)
Q Consensus 316 ~~~ 318 (399)
+..
T Consensus 211 ~~~ 213 (235)
T 3l6e_A 211 LEA 213 (235)
T ss_dssp TCC
T ss_pred HhC
Confidence 863
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-18 Score=159.21 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=156.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.|+||+++||||++.||.++++.|+++| .+|.+..|+++.. +...+++.+ .+.++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~~~~---~~~~~~i~~------------------~g~~~ 58 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLEDRL---NQIVQELRG------------------MGKEV 58 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH------------------TTCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHH---HHHHHHHHh------------------cCCcE
Confidence 35899999999999999999999999999 5667887865432 222222200 14678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.++++|+++++......+...+.+.++|++||+||... + .+.++..+++|+.++..+.+++.+. ++..+
T Consensus 59 ~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 138 (254)
T 4fn4_A 59 LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGV 138 (254)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence 89999999765433223333344568999999999642 1 2568899999999999999887663 35578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||....... .....|+.+|.
T Consensus 139 IVnisS~~g~~~~--------------------------------------------------------~~~~~Y~asKa 162 (254)
T 4fn4_A 139 IVNTASIAGIRGG--------------------------------------------------------FAGAPYTVAKH 162 (254)
T ss_dssp EEEECCGGGTCSS--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEechhhcCCC--------------------------------------------------------CCChHHHHHHH
Confidence 9999998643211 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
....+.+.. ..|+++..+-||.|-.+..... ..... ........ ..+. ..-+...+|+|++
T Consensus 163 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~---~~~~~~~~-~~~~-------~~R~g~pediA~~ 228 (254)
T 4fn4_A 163 GLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS---SKPSE---LGMRTLTK-LMSL-------SSRLAEPEDIANV 228 (254)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC---SSCCH---HHHHHHHH-HHTT-------CCCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc---cCCcH---HHHHHHHh-cCCC-------CCCCcCHHHHHHH
Confidence 999888766 6689999999999977543111 11100 00111111 0000 0123457899999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++.... .--.|..+.+.++
T Consensus 229 v~fLaSd~a-~~iTG~~i~VDGG 250 (254)
T 4fn4_A 229 IVFLASDEA-SFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCCcCCEEEeCCC
Confidence 999886432 2223788988887
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=162.95 Aligned_cols=175 Identities=15% Similarity=0.162 Sum_probs=124.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+.+|+|+||||+|+||++++++|+++| ++|.++.|+.+.. +...+++ .. .+.++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~ 58 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREAL---EKAEASV---------RE---------KGVEA 58 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HT---------TTSCE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcE
Confidence 34788999999999999999999999999 5568888865322 2222211 00 13478
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc-Cc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~-~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
.++.+|+++++......+...+.+.++|+|||+||.. .. .+.++..+++|+.++.++++++.+. .+..+
T Consensus 59 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 138 (262)
T 1zem_A 59 RSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGR 138 (262)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 8999999964321111111212334799999999975 21 2457888999999999999987663 24579
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 139 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 162 (262)
T 1zem_A 139 IVNTASMAGVKGP--------------------------------------------------------PNMAAYGTSKG 162 (262)
T ss_dssp EEEECCHHHHSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCchHHHHHH
Confidence 9999998655421 11357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
..+.+.+.. ..++++++++||.|.++
T Consensus 163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 163 AIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 998888765 45899999999988664
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-18 Score=159.03 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=142.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++|+|+||||+|+||++++++|++ .| ++|.++.|+.... +...+++ .. .+.++.
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 57 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRG---QAAVQQL---------QA---------EGLSPR 57 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHH---HHHHHHH---------HH---------TTCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcC---CeEEEEeCChHHH---HHHHHHH---------Hh---------cCCeeE
Confidence 4679999999999999999999999 89 5678888875322 1111111 00 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VK 153 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~ 153 (399)
++.+|++++ +.+..++ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 58 ~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 130 (276)
T 1wma_A 58 FHQLDIDDL-------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP 130 (276)
T ss_dssp EEECCTTCH-------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC
Confidence 999999963 3332333 379999999997532 2556778999999999999999874 22
Q ss_pred CceEEEEecceeecCcCC-------ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc-ccC
Q 015874 154 LKVFVHVSTAYVAGERTG-------LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA-KLH 225 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~-------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 225 (399)
..+||++||...+..... ......+++ +......+ .+....+.... .+.
T Consensus 131 ~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e------~~~~~~~~-----------------~~~~~~~~~~~~~~~ 187 (276)
T 1wma_A 131 QGRVVNVSSIMSVRALKSCSPELQQKFRSETITE------EELVGLMN-----------------KFVEDTKKGVHQKEG 187 (276)
T ss_dssp EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH------HHHHHHHH-----------------HHHHHHHTTCTTTTT
T ss_pred CCEEEEECChhhhcccccCChhHHhhccccccch------hhhhhhhh-----------------hhhhhhcccccccCC
Confidence 358999999877642100 000111110 00000000 00000000000 011
Q ss_pred CCCchhhHhHHHHHHHHHHh-----h----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCC
Q 015874 226 GWPNTYVFTKTMGEMLMQQS-----K----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGET 296 (399)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~-----~----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
.+.+.|+.+|.+.|.+++.+ . .++++++++||.|.++... .
T Consensus 188 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~-------~----------------------- 237 (276)
T 1wma_A 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG-------P----------------------- 237 (276)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC-------T-----------------------
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC-------c-----------------------
Confidence 23378999999999998765 2 5899999999998764321 0
Q ss_pred ccccCeeeHHHHHHHHHHHHHh
Q 015874 297 KVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 297 ~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
..+.+.+|+|++++.++..
T Consensus 238 ---~~~~~~~~~a~~~~~l~~~ 256 (276)
T 1wma_A 238 ---KATKSPEEGAETPVYLALL 256 (276)
T ss_dssp ---TCSBCHHHHTHHHHHHHSC
T ss_pred ---cccCChhHhhhhHhhhhcC
Confidence 1357899999999998863
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=154.53 Aligned_cols=210 Identities=12% Similarity=0.051 Sum_probs=143.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
...++|+|+||||+|+||++++++|+++| ++|.++.|+..... ...
T Consensus 3 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~-------------------------------~~~ 48 (241)
T 1dhr_A 3 ASGEARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------------------------------SAS 48 (241)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------------------------------SEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCChhhcc-------------------------------CCc
Confidence 34578999999999999999999999999 56788888865420 235
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~ 156 (399)
.++.+|+++++......+...+.+ .++|+|||+||.... .+.++..+++|+.++.++++++.+. .+..+
T Consensus 49 ~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~ 128 (241)
T 1dhr_A 49 VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGL 128 (241)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCE
Confidence 678899995332110111111112 479999999996431 2456778999999999999998763 22368
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
||++||...+... .....|+.+|.
T Consensus 129 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 152 (241)
T 1dhr_A 129 LTLAGAKAALDGT--------------------------------------------------------PGMIGYGMAKG 152 (241)
T ss_dssp EEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEECCHHHccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998765421 12357999999
Q ss_pred HHHHHHHHh--h-----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 237 MGEMLMQQS--K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 237 ~~E~~l~~~--~-----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
..+.+.+.+ + .++++++++||.|-++.. ...... .....+++.+|+|
T Consensus 153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------------~~~~~~---------~~~~~~~~~~~vA 206 (241)
T 1dhr_A 153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------------RKSMPE---------ADFSSWTPLEFLV 206 (241)
T ss_dssp HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------------HHHSTT---------SCGGGSEEHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------------cccCcc---------hhhccCCCHHHHH
Confidence 999999876 2 369999999998865321 110000 1123457889999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++... ...-.++.+++.++
T Consensus 207 ~~v~~l~~~~-~~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 207 ETFHDWITGN-KRPNSGSLIQVVTT 230 (241)
T ss_dssp HHHHHHHTTT-TCCCTTCEEEEEEE
T ss_pred HHHHHHhcCC-CcCccceEEEEeCC
Confidence 9999988632 22223678888665
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-18 Score=156.54 Aligned_cols=229 Identities=12% Similarity=0.103 Sum_probs=150.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++|+|+||||+|+||.+++++|+++| .+|.++.++.... .+...+++ .. .+.++.+
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 61 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRKEE--AEETVYEI---------QS---------NGGSAFS 61 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCSHH--HHHHHHHH---------HH---------TTCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchHH--HHHHHHHH---------Hh---------cCCceEE
Confidence 678999999999999999999999999 4556654443221 12221111 00 1357888
Q ss_pred EeccCCCCCCCCCchhhHHHHh------cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELW------NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~------~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~ 155 (399)
+.+|+++.+......+.....+ .++|++||+||.... .+.++..+++|+.++.++++++.+. ++..
T Consensus 62 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 141 (255)
T 3icc_A 62 IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS 141 (255)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred EecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCC
Confidence 9999996432110111111111 139999999997532 2456778999999999999998764 2346
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 142 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 165 (255)
T 3icc_A 142 RIINISSAATRISL--------------------------------------------------------PDFIAYSMTK 165 (255)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEeCChhhccCC--------------------------------------------------------CCcchhHHhH
Confidence 89999998654421 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+.+.+ ..++++..++||.|.++..... ... ........ .......+...+|+|+
T Consensus 166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-----~~~~~~~~--------~~~~~~~~~~~~dva~ 229 (255)
T 3icc_A 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL---LSD-----PMMKQYAT--------TISAFNRLGEVEDIAD 229 (255)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT---TTS-----HHHHHHHH--------HTSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh---ccc-----HHHHHhhh--------ccCCcCCCCCHHHHHH
Confidence 9999998766 4589999999999988654221 111 00111111 0112345678999999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... .-.++++++.++
T Consensus 230 ~~~~l~s~~~~-~~tG~~i~vdgG 252 (255)
T 3icc_A 230 TAAFLASPDSR-WVTGQLIDVSGG 252 (255)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHhCcccC-CccCCEEEecCC
Confidence 99998864322 223789999887
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=160.89 Aligned_cols=211 Identities=13% Similarity=0.153 Sum_probs=138.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++. . .+.++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~l~---------~---------~~~~~~~ 57 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAG---AKILLGARRQARI---EAIATEIR---------D---------AGGTALA 57 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHHH---------H---------TTCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH---------h---------cCCcEEE
Confidence 467999999999999999999999999 5668888875432 22222110 0 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. .+..+||+
T Consensus 58 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~ 137 (264)
T 3tfo_A 58 QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIIN 137 (264)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 9999996442111111122233579999999997632 2567888999999999998887652 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.||...+
T Consensus 138 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 161 (264)
T 3tfo_A 138 IGSIGALSVV--------------------------------------------------------PTAAVYCATKFAVR 161 (264)
T ss_dssp ECCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EcCHHHcccC--------------------------------------------------------CCChhHHHHHHHHH
Confidence 9998655421 12357999999999
Q ss_pred HHHHHh--h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 240 MLMQQS--K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 240 ~~l~~~--~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.+.. + .++++..++||.|.++...... .. ........ ....+...+|+|++++.++
T Consensus 162 ~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~---~~--------------~~~~~~~~--~~~~~~~pedvA~~v~~l~ 222 (264)
T 3tfo_A 162 AISDGLRQESTNIRVTCVNPGVVESELAGTIT---HE--------------ETMAAMDT--YRAIALQPADIARAVRQVI 222 (264)
T ss_dssp HHHHHHHHHCSSEEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCCcCccccccc---ch--------------hHHHHHHh--hhccCCCHHHHHHHHHHHh
Confidence 998876 2 3899999999999775431100 00 00000000 0112468999999999999
Q ss_pred Hhc
Q 015874 317 VAH 319 (399)
Q Consensus 317 ~~~ 319 (399)
...
T Consensus 223 s~~ 225 (264)
T 3tfo_A 223 EAP 225 (264)
T ss_dssp HSC
T ss_pred cCC
Confidence 743
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=157.64 Aligned_cols=230 Identities=8% Similarity=-0.024 Sum_probs=153.6
Q ss_pred hhcCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 8 EFLENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 8 ~~~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
..++||+|+||||+ |+||.+++++|+++| .+|.++.|+.... ...+.+.+ . .
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G---~~v~~~~~~~~~~~~~~~~~l~~-------------~--------~ 71 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMG---AAVAITYASRAQGAEENVKELEK-------------T--------Y 71 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTS---CEEEECBSSSSSHHHHHHHHHHH-------------H--------H
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEeCCcchhHHHHHHHHHH-------------h--------c
Confidence 34789999999999 999999999999999 5567777776542 11122111 1 1
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
+.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 72 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 151 (267)
T 3gdg_A 72 GIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG 151 (267)
T ss_dssp CCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC
Confidence 3678999999996543111112222223478999999997532 2567888999999999999988542 25
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++||...+.... ......|+.
T Consensus 152 ~g~iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~~ 177 (267)
T 3gdg_A 152 TGSLVITASMSGHIANF------------------------------------------------------PQEQTSYNV 177 (267)
T ss_dssp CCEEEEECCGGGTSCCS------------------------------------------------------SSCCHHHHH
T ss_pred CceEEEEccccccccCC------------------------------------------------------CCCCCcchH
Confidence 67899999976443210 012357999
Q ss_pred hHHHHHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 234 sK~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
+|.+.+.+.+.+ ...+++..+.||.|..+..... . ........ .......+.+.+|+|
T Consensus 178 sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~----~-----~~~~~~~~---------~~~~~~r~~~~~dva 239 (267)
T 3gdg_A 178 AKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV----P-----KETQQLWH---------SMIPMGRDGLAKELK 239 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS----C-----HHHHHHHH---------TTSTTSSCEETHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC----C-----HHHHHHHH---------hcCCCCCCcCHHHHH
Confidence 999999999876 2238999999999977543111 0 01111111 112234578899999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++.... ..-.+..+++.++
T Consensus 240 ~~~~~l~s~~~-~~itG~~i~vdgG 263 (267)
T 3gdg_A 240 GAYVYFASDAS-TYTTGADLLIDGG 263 (267)
T ss_dssp HHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred hHhheeecCcc-ccccCCEEEECCc
Confidence 99999886322 2223789999887
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-18 Score=160.82 Aligned_cols=229 Identities=13% Similarity=0.087 Sum_probs=149.8
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+..+++|+||||||+|+||.++++.|+++| ++|.+.. |+.+.. +...+++ ... .+
T Consensus 3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~~~~---~~~~~~l---------~~~--------~~ 59 (291)
T 1e7w_A 3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEA---NALSATL---------NAR--------RP 59 (291)
T ss_dssp -----CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHH---HHHHHHH---------HHH--------ST
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCHHHH---HHHHHHH---------hhh--------cC
Confidence 3445789999999999999999999999999 5568888 764322 2222211 000 13
Q ss_pred CceEEEeccCCCCC-----------------CCCCchhhHHHHhcCccEEEEcccccCc---------------------
Q 015874 85 EKITFVPGDISSED-----------------LGLKDSNLKEELWNELDIMVNSAAITKF--------------------- 126 (399)
Q Consensus 85 ~~i~~~~gDl~~~~-----------------~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------------------- 126 (399)
.++.++.+|+++++ ......+...+.+.++|++||+||....
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (291)
T 1e7w_A 60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139 (291)
T ss_dssp TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 57889999999765 2111111111223479999999997532
Q ss_pred cccHHHHHHHhHHHHHHHHHHHHhc---cC------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHH
Q 015874 127 DERYDVAFGINTLGVIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKL 197 (399)
Q Consensus 127 ~~~~~~~~~~n~~~~~~ll~~a~~~---~~------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 197 (399)
.+.++..+++|+.++.++++++.+. .+ ..+||++||...+...
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------------- 191 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL---------------------------- 191 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------------------------
Confidence 3456678999999999999988653 23 4789999998654321
Q ss_pred HhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCccc
Q 015874 198 NELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVE 272 (399)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~ 272 (399)
.....|+.+|...+.+.+.+ ..+++++.++||.|..+. . . .
T Consensus 192 ----------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~----~ 237 (291)
T 1e7w_A 192 ----------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M----P 237 (291)
T ss_dssp ----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S----C
T ss_pred ----------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C----C
Confidence 12357999999999988766 458999999999986643 1 1 0
Q ss_pred CcchHHHHHHHhhcCccccccCCCcccc-CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 273 DLKTINTLFVASAQGNLRCLVGETKVIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
......... . .+ .. -+...+|+|++++.++..... .-.+..+++.++
T Consensus 238 -----~~~~~~~~~-~---~p-----~~~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 285 (291)
T 1e7w_A 238 -----PAVWEGHRS-K---VP-----LYQRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 285 (291)
T ss_dssp -----HHHHHHHHT-T---CT-----TTTSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred -----HHHHHHHHh-h---CC-----CCCCCCCHHHHHHHHHHHhCCccc-CccCcEEEECCC
Confidence 111111111 1 11 11 356789999999998863322 222778888876
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.3e-18 Score=160.34 Aligned_cols=213 Identities=14% Similarity=0.071 Sum_probs=138.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ ... ....+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~--------~~~~~~ 86 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEG---YSVVITGRRPDVL---DAAAGEI---------GGR--------TGNIVR 86 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------HSSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hhc--------CCCeEE
Confidence 4688999999999999999999999999 5678888875432 2222111 000 123468
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC--Cc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK--LK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~--~~ 155 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+ ..
T Consensus 87 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 166 (281)
T 4dry_A 87 AVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG 166 (281)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999996542111112222233578999999997532 2567788999999999998887653 12 46
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 167 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 190 (281)
T 4dry_A 167 RIINNGSISAQTPR--------------------------------------------------------PNSAPYTATK 190 (281)
T ss_dssp EEEEECCGGGTCCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCHHhCCCC--------------------------------------------------------CCChhHHHHH
Confidence 89999998644321 2235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+.+.. ..++++..++||.|.++...... . ..... ........++..+|+|+
T Consensus 191 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-----------------~-~~~~~-~~~~~~~~~~~pedvA~ 251 (281)
T 4dry_A 191 HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS-----------------T-GVLQA-NGEVAAEPTIPIEHIAE 251 (281)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------------C-EEECT-TSCEEECCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc-----------------c-hhhhh-hhcccccCCCCHHHHHH
Confidence 9999998866 46899999999999875431110 0 00000 00112234678999999
Q ss_pred HHHHHHHhc
Q 015874 311 AMIVAMVAH 319 (399)
Q Consensus 311 ~i~~~~~~~ 319 (399)
+++.++...
T Consensus 252 ~v~fL~s~~ 260 (281)
T 4dry_A 252 AVVYMASLP 260 (281)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHhCCC
Confidence 999999743
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=5.9e-18 Score=161.55 Aligned_cols=227 Identities=13% Similarity=0.091 Sum_probs=148.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA-DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..+++|+|+||||+|+||++++++|+++| .+|.++.|+. +.. +...+++ ... .+.+
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~~---~~~~~~l---------~~~--------~~~~ 75 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTG---YRVVIHYHNSAEAA---VSLADEL---------NKE--------RSNT 75 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHT---CEEEEEESSCHHHH---HHHHHHH---------HHH--------STTC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEeCCchHHH---HHHHHHH---------Hhh--------cCCc
Confidence 44788999999999999999999999999 5678888876 322 2222111 000 1357
Q ss_pred eEEEeccCCC----CCCCCCchhhHHHHhcCccEEEEcccccCc-----------------cccHHHHHHHhHHHHHHHH
Q 015874 87 ITFVPGDISS----EDLGLKDSNLKEELWNELDIMVNSAAITKF-----------------DERYDVAFGINTLGVIHLV 145 (399)
Q Consensus 87 i~~~~gDl~~----~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------------~~~~~~~~~~n~~~~~~ll 145 (399)
+.++.+|+++ ++......+...+.+.++|+|||+||.... .+.++..+++|+.++..++
T Consensus 76 ~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 155 (288)
T 2x9g_A 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLT 155 (288)
T ss_dssp EEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHH
T ss_pred eEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHH
Confidence 8899999996 321111111111223479999999997431 1345677899999999999
Q ss_pred HHHHhc-c--C------CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhh
Q 015874 146 NFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKN 216 (399)
Q Consensus 146 ~~a~~~-~--~------~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (399)
+++.+. . + ..+||++||...+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------- 188 (288)
T 2x9g_A 156 MSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC----------------------------------------------- 188 (288)
T ss_dssp HHHHHHC--------CCCEEEEEECCTTTTSCC-----------------------------------------------
T ss_pred HHHHHHHhhcCCCCCCCCeEEEEEecccccCCC-----------------------------------------------
Confidence 988663 1 2 4589999998654421
Q ss_pred ccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccc
Q 015874 217 LGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (399)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (399)
.....|+.+|++.+.+.+.+ ..|+++++++||.|.++. .. .. .........
T Consensus 189 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~----~~------~~~~~~~~~---- 244 (288)
T 2x9g_A 189 ---------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM----GE------EEKDKWRRK---- 244 (288)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS----CH------HHHHHHHHT----
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc----Ch------HHHHHHHhh----
Confidence 12357999999999888765 358999999999998865 21 01 111111111
Q ss_pred ccCCCccccCe-eeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 292 LVGETKVIMDV-IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 292 ~~~~~~~~~~~-i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+ ...+ ...+|+|++++.++..... .-.+..+++.++
T Consensus 245 ~p-----~~r~~~~pedvA~~v~~l~s~~~~-~itG~~i~vdGG 282 (288)
T 2x9g_A 245 VP-----LGRREASAEQIADAVIFLVSGSAQ-YITGSIIKVDGG 282 (288)
T ss_dssp CT-----TTSSCCCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CC-----CCCCCCCHHHHHHHHHHHhCcccc-CccCCEEEECcc
Confidence 11 1123 6889999999999864322 223778888876
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=158.00 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=149.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+|+||||+|+||+++++.|+++| .+|.+..|+.+.. +...+++ +.++
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~~~~---~~~~~~~---------------------~~~~ 78 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAAEKG---KALADEL---------------------GNRA 78 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------CTTE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHH---HHHHHHh---------------------CCce
Confidence 45789999999999999999999999999 5668888865332 2222211 3578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHh------cCccEEEEcc-cccCc------------cccHHHHHHHhHHHHHHHHHHH
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELW------NELDIMVNSA-AITKF------------DERYDVAFGINTLGVIHLVNFA 148 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~------~~~D~Vih~A-a~~~~------------~~~~~~~~~~n~~~~~~ll~~a 148 (399)
.++.+|+++++ ....++ .++|++||+| +.... .+.++..+++|+.++.++++++
T Consensus 79 ~~~~~Dl~~~~-------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 151 (281)
T 3ppi_A 79 EFVSTNVTSED-------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLV 151 (281)
T ss_dssp EEEECCTTCHH-------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEEcCCCCHH-------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999643 332332 2589999994 43211 1346888999999999999987
Q ss_pred Hhc---------cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 015874 149 KKC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (399)
Q Consensus 149 ~~~---------~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (399)
... .+..+||++||...+...
T Consensus 152 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------- 181 (281)
T 3ppi_A 152 AASIAAAEPRENGERGALVLTASIAGYEGQ-------------------------------------------------- 181 (281)
T ss_dssp HHHHHTSCCCTTSCCEEEEEECCGGGTSCC--------------------------------------------------
T ss_pred HHHHHhhcccccCCCeEEEEEecccccCCC--------------------------------------------------
Confidence 643 134589999998755421
Q ss_pred cccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccC
Q 015874 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVG 294 (399)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
.....|+.+|.+.+.+.+.. ..++++..++||.|.++.... +. ...........
T Consensus 182 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~------~~~~~~~~~~~------ 240 (281)
T 3ppi_A 182 ------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES---VG------EEALAKFAANI------ 240 (281)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---TC------HHHHHHHHHTC------
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc---cc------HHHHHHHHhcC------
Confidence 12357999999999888765 458999999999987643211 00 01111111110
Q ss_pred CCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 295 ETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 295 ~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.....+.+.+|+|++++.++.. ... .+..+++.++
T Consensus 241 --~~~~~~~~pedvA~~v~~l~s~-~~~--tG~~i~vdGG 275 (281)
T 3ppi_A 241 --PFPKRLGTPDEFADAAAFLLTN-GYI--NGEVMRLDGA 275 (281)
T ss_dssp --CSSSSCBCHHHHHHHHHHHHHC-SSC--CSCEEEESTT
T ss_pred --CCCCCCCCHHHHHHHHHHHHcC-CCc--CCcEEEECCC
Confidence 0114578999999999999973 222 2789999887
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=157.55 Aligned_cols=207 Identities=13% Similarity=0.083 Sum_probs=138.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|++|||||+|+||.+++++|+++| .+|.+..|+.+.. +...+++ ....+ ...++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~~~------~~~~~~ 62 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDG---YRVVLIARSKQNL---EKVHDEI---------MRSNK------HVQEPI 62 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHT---CEEEEEESCHHHH---HHHHHHH---------HHHCT------TSCCCE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------HHhcc------ccCcce
Confidence 4778999999999999999999999999 5668888876433 2222211 00000 115788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. .+..++|+
T Consensus 63 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 142 (250)
T 3nyw_A 63 VLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFN 142 (250)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 99999996432111111111223479999999997532 2567788999999999999988542 25678999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .+...|+.+|.+.+
T Consensus 143 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 166 (250)
T 3nyw_A 143 VASRAAKYGF--------------------------------------------------------ADGGIYGSTKFALL 166 (250)
T ss_dssp ECC---------------------------------------------------------------CCTTHHHHHHHHHH
T ss_pred EccHHhcCCC--------------------------------------------------------CCCcchHHHHHHHH
Confidence 9997644311 11357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..++||.|.++.. ..... ......+++.+|+|++++.
T Consensus 167 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------------~~~~~---------~~~~~~~~~p~dva~~v~~ 220 (250)
T 3nyw_A 167 GLAESLYRELAPLGIRVTTLCPGWVNTDMA-----------------KKAGT---------PFKDEEMIQPDDLLNTIRC 220 (250)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----------------HHTTC---------CSCGGGSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCchh-----------------hhcCC---------CcccccCCCHHHHHHHHHH
Confidence 988766 4589999999998865321 11100 0112347899999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
++..
T Consensus 221 l~s~ 224 (250)
T 3nyw_A 221 LLNL 224 (250)
T ss_dssp HHTS
T ss_pred HHcC
Confidence 9974
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=161.02 Aligned_cols=233 Identities=14% Similarity=0.132 Sum_probs=149.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.||+|+||||+|+||.+++++|+++| .+|.+..|+.+.. +.+.+ . .+.++.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~-------------~--------~~~~~~~ 55 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEG---ARVAVLDKSAERL---RELEV-------------A--------HGGNAVG 55 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-------------H--------TBTTEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHHH---HHHHH-------------H--------cCCcEEE
Confidence 678999999999999999999999999 5668888764322 22211 1 1357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. ....
T Consensus 56 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g 135 (281)
T 3zv4_A 56 VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG 135 (281)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 9999996543111122222234579999999997532 1236778999999999999988663 1236
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+... .....|+.||
T Consensus 136 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 159 (281)
T 3zv4_A 136 SVVFTISNAGFYPN--------------------------------------------------------GGGPLYTATK 159 (281)
T ss_dssp EEEEECCGGGTSSS--------------------------------------------------------SSCHHHHHHH
T ss_pred eEEEEecchhccCC--------------------------------------------------------CCCchhHHHH
Confidence 89999988654321 1235799999
Q ss_pred HHHHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchH-HHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTI-NTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
.+.+.+.+.. ...+++..+.||.|.++............... ......... ......+...+|+|+
T Consensus 160 aa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~ 230 (281)
T 3zv4_A 160 HAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS---------VLPIGRMPALEEYTG 230 (281)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH---------TCTTSSCCCGGGGSH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHh---------cCCCCCCCCHHHHHH
Confidence 9999998876 23499999999999886432111000000000 000011111 111234677889999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++.......-.|..+++.++
T Consensus 231 ~v~fL~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 231 AYVFFATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp HHHHHHSTTTSTTCSSCEEEESSS
T ss_pred HHHHhhcccccccccCcEEEECCC
Confidence 999988622222223789999887
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-17 Score=155.42 Aligned_cols=233 Identities=12% Similarity=0.178 Sum_probs=156.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||.++++.|+++| .+|.+..|+.+.....+.+.+ .+.++.
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~G---a~Vv~~~r~~~~~~~~~~~~~----------------------~~~~~~ 58 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEER---AIPVVFARHAPDGAFLDALAQ----------------------RQPRAT 58 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCCHHHHHHHHH----------------------HCTTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCcccHHHHHHHHh----------------------cCCCEE
Confidence 4899999999999999999999999999 567888888765433333222 136788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|++
T Consensus 59 ~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 138 (258)
T 4gkb_A 59 YLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNI 138 (258)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99999997543222222233345689999999997532 3568888999999999999887653 234689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||....... .....|+.+|...+.
T Consensus 139 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaav~~ 162 (258)
T 4gkb_A 139 SSKTAVTGQ--------------------------------------------------------GNTSGYCASKGAQLA 162 (258)
T ss_dssp CCTHHHHCC--------------------------------------------------------SSCHHHHHHHHHHHH
T ss_pred eehhhccCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998644321 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..|+++..+.||.|-.+.... +................ ..+ -..-+...+|+|++++.+
T Consensus 163 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~-~~p-------lg~R~g~peeiA~~v~fL 231 (258)
T 4gkb_A 163 LTREWAVALREHGVRVNAVIPAEVMTPLYRN---WIATFEDPEAKLAEIAA-KVP-------LGRRFTTPDEIADTAVFL 231 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHT-TCT-------TTTSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCeEEEEEecCCCCChhHhh---hhhcccChHHHHHHHHh-cCC-------CCCCCcCHHHHHHHHHHH
Confidence 88766 679999999999998765421 11100000001111111 100 012355678999999998
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.... .--.|..+.+.++
T Consensus 232 aS~~a-~~iTG~~i~VDGG 249 (258)
T 4gkb_A 232 LSPRA-SHTTGEWLFVDGG 249 (258)
T ss_dssp HSGGG-TTCCSCEEEESTT
T ss_pred hCchh-cCccCCeEEECCC
Confidence 86433 2223788999887
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=156.74 Aligned_cols=216 Identities=16% Similarity=0.155 Sum_probs=137.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.+++|+||||||+|+||++++++|+++| ++|+++.|+.... +.+.+++ ... + ...++
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~-~------~~~~~ 85 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGNI---EELAAEC---------KSA-G------YPGTL 85 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHT-T------CSSEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECChHHH---HHHHHHH---------Hhc-C------CCceE
Confidence 45789999999999999999999999999 5678888865332 2222111 000 0 12468
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHH----HHHHHHHhccCC--
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVI----HLVNFAKKCVKL-- 154 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~----~ll~~a~~~~~~-- 154 (399)
.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++. .++..+++. +.
T Consensus 86 ~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~ 164 (279)
T 1xg5_A 86 IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDD 164 (279)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCS
T ss_pred EEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCC
Confidence 889999996432111111111223479999999997532 2457788999999954 445555553 43
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+.... ......|+.+
T Consensus 165 g~iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~~s 190 (279)
T 1xg5_A 165 GHIININSMSGHRVLP------------------------------------------------------LSVTHFYSAT 190 (279)
T ss_dssp CEEEEECCGGGTSCCS------------------------------------------------------CGGGHHHHHH
T ss_pred ceEEEEcChhhcccCC------------------------------------------------------CCCCchhHHH
Confidence 7999999987653211 0113579999
Q ss_pred HHHHHHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 235 KTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 235 K~~~E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
|...+.+++.+ ..++++++++||.|.++.... .... . ...... . .....+++.+|
T Consensus 191 K~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~---~~~~--~-~~~~~~-------~-----~~~~~~~~~~d 252 (279)
T 1xg5_A 191 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK---LHDK--D-PEKAAA-------T-----YEQMKCLKPED 252 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH---HTTT--C-HHHHHH-------H-----HC---CBCHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh---hccc--C-hhHHhh-------h-----cccccCCCHHH
Confidence 99999888755 247999999999997753100 0000 0 000000 0 01234688999
Q ss_pred HHHHHHHHHHh
Q 015874 308 VVNAMIVAMVA 318 (399)
Q Consensus 308 va~~i~~~~~~ 318 (399)
+|++++.++..
T Consensus 253 vA~~i~~l~~~ 263 (279)
T 1xg5_A 253 VAEAVIYVLST 263 (279)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 99999999973
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=158.05 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=149.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS----AALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.+++|+|+||||+|+||++++++|+++| .+|.+..|+..... .++...+++. . .+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~---------~~ 64 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADG---ANVALVAKSAEPHPKLPGTIYTAAKEIE---------E---------AG 64 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHHH---------H---------HT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECChhhhhhhhHHHHHHHHHHH---------h---------cC
Confidence 3789999999999999999999999999 56788999876422 1222222110 0 13
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
.++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+.
T Consensus 65 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 144 (285)
T 3sc4_A 65 GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN 144 (285)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 678999999996442111112222223489999999997632 2567788999999999999998764 245
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+.... .....|+.|
T Consensus 145 g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~as 169 (285)
T 3sc4_A 145 PHILTLSPPIRLEPKW-------------------------------------------------------LRPTPYMMA 169 (285)
T ss_dssp CEEEECCCCCCCSGGG-------------------------------------------------------SCSHHHHHH
T ss_pred cEEEEECChhhccCCC-------------------------------------------------------CCCchHHHH
Confidence 6899999976443210 113579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCc-eecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTV-VSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~-V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
|.+.+.+.+.. ..|++++.++||. +-.+ +........ .....+...+|+
T Consensus 170 Kaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------------~~~~~~~~~--------~~~~r~~~pedv 224 (285)
T 3sc4_A 170 KYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------------AVQNLLGGD--------EAMARSRKPEVY 224 (285)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------------HHHHHHTSC--------CCCTTCBCTHHH
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------------HHHhhcccc--------ccccCCCCHHHH
Confidence 99999998866 4689999999984 3221 112111111 112345678999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++.... .-.++.+.+.++
T Consensus 225 A~~~~~l~s~~~--~~tG~~i~~dgg 248 (285)
T 3sc4_A 225 ADAAYVVLNKPS--SYTGNTLLCEDV 248 (285)
T ss_dssp HHHHHHHHTSCT--TCCSCEEEHHHH
T ss_pred HHHHHHHhCCcc--cccceEEEEcCc
Confidence 999999987433 222566655543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-18 Score=157.95 Aligned_cols=212 Identities=15% Similarity=0.143 Sum_probs=142.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.+|+++||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .. .+.++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~ 59 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEG---AAVAIAARRVEKL---RALGDEL---------TA---------AGAKVH 59 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------TTCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------Hh---------cCCcEE
Confidence 4778999999999999999999999999 5668888875322 2222211 00 125788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+ .+||
T Consensus 60 ~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv 138 (247)
T 2jah_A 60 VLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVV 138 (247)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEE
Confidence 99999996432111111111223479999999997532 2457788999999999999987653 24 7999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 139 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 162 (247)
T 2jah_A 139 QMSSIAGRVNV--------------------------------------------------------RNAAVYQATKFGV 162 (247)
T ss_dssp EECCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEccHHhcCCC--------------------------------------------------------CCCcHHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++++++||.|.++.... +.. . . ...... ..+ + .+.++..+|+|++++
T Consensus 163 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~--~---~-~~~~~~----~~~--~--~~~~~~pedvA~~v~ 225 (247)
T 2jah_A 163 NAFSETLRQEVTERGVRVVVIEPGTTDTELRGH---ITH--T---A-TKEMYE----QRI--S--QIRKLQAQDIAEAVR 225 (247)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---CCC--H---H-HHHHHH----HHT--T--TSCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcEEEEEECCCCCCcchhc---ccc--h---h-hHHHHH----hcc--c--ccCCCCHHHHHHHHH
Confidence 9888765 458999999999998754311 100 0 0 111111 111 1 122588999999999
Q ss_pred HHHHh
Q 015874 314 VAMVA 318 (399)
Q Consensus 314 ~~~~~ 318 (399)
.++..
T Consensus 226 ~l~s~ 230 (247)
T 2jah_A 226 YAVTA 230 (247)
T ss_dssp HHHHS
T ss_pred HHhCC
Confidence 99873
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=159.13 Aligned_cols=206 Identities=14% Similarity=0.139 Sum_probs=139.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..+++|+|+||||+|+||+++++.|+++| ++|.++.|+.+.. +...+++ .+. ...++
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~~--------~~~~~ 80 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETL---QKVVSHC---------LEL--------GAASA 80 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HHH--------TCSEE
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------HHh--------CCCce
Confidence 45789999999999999999999999999 5678888875432 2221111 000 12368
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEc-ccccCc------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNS-AAITKF------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~-Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v 158 (399)
.++.+|+++++......+...+.+.++|+|||+ |+.... .+.++..+++|+.++.++++++.+. ++..+||
T Consensus 81 ~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv 160 (286)
T 1xu9_A 81 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 160 (286)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEE
Confidence 899999996432111111111223479999999 565422 2456778999999999999987653 1346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+... .....|+.||...
T Consensus 161 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~ 184 (286)
T 1xu9_A 161 VVSSLAGKVAY--------------------------------------------------------PMVAAYSASKFAL 184 (286)
T ss_dssp EEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCcccccCC--------------------------------------------------------CCccHHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+++.+ ..++++++++||.|.++.. .....+ ......++.+|+|+.
T Consensus 185 ~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------------~~~~~~---------~~~~~~~~~~~vA~~ 238 (286)
T 1xu9_A 185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------------MKAVSG---------IVHMQAAPKEECALE 238 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------------HHHSCG---------GGGGGCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------------HHhccc---------cccCCCCCHHHHHHH
Confidence 9888765 2479999999998865321 111111 112456889999999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++.++..
T Consensus 239 i~~~~~~ 245 (286)
T 1xu9_A 239 IIKGGAL 245 (286)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9998874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=155.00 Aligned_cols=219 Identities=13% Similarity=0.084 Sum_probs=143.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+.++||+|+||||+|+||++++++|+++| ++|.++.|+.... +...+++ .. ....+
T Consensus 9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~--------~~~~~ 65 (247)
T 3i1j_A 9 PELLKGRVILVTGAARGIGAAAARAYAAHG---ASVVLLGRTEASL---AEVSDQI---------KS--------AGQPQ 65 (247)
T ss_dssp TTTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH--------TTSCC
T ss_pred CccCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEecCHHHH---HHHHHHH---------Hh--------cCCCC
Confidence 456889999999999999999999999999 5668888875432 2222211 00 11245
Q ss_pred eEEEeccC--CCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 87 ITFVPGDI--SSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 87 i~~~~gDl--~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
..++.+|+ ++.+......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 66 ~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 145 (247)
T 3i1j_A 66 PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE 145 (247)
T ss_dssp CEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred ceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 67777777 64321111111111223479999999997521 2567888999999999999988542 24
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++||...+... .....|+.
T Consensus 146 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 169 (247)
T 3i1j_A 146 DASIAFTSSSVGRKGR--------------------------------------------------------ANWGAYGV 169 (247)
T ss_dssp SEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CCeEEEEcchhhcCCC--------------------------------------------------------CCcchhHH
Confidence 5789999997644321 22357999
Q ss_pred hHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 234 TKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 234 sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
+|.+.+.+.+.+ . .++++..++||.|.++. ....... .....+...+|
T Consensus 170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-----------------~~~~~~~---------~~~~~~~~p~d 223 (247)
T 3i1j_A 170 SKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-----------------RAQAYPD---------ENPLNNPAPED 223 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-----------------HHHHSTT---------SCGGGSCCGGG
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-----------------chhcccc---------cCccCCCCHHH
Confidence 999999998866 2 57999999999875521 1111110 11123456789
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEe
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni 331 (399)
+|++++.++...... -.|..+++
T Consensus 224 va~~~~~l~s~~~~~-itG~~i~~ 246 (247)
T 3i1j_A 224 IMPVYLYLMGPDSTG-INGQALNA 246 (247)
T ss_dssp GTHHHHHHHSGGGTT-CCSCEEEC
T ss_pred HHHHHHHHhCchhcc-ccCeeecC
Confidence 999999988643221 12555543
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=157.11 Aligned_cols=234 Identities=14% Similarity=0.072 Sum_probs=154.7
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
.|.+.++||++|||||++.||.++++.|+++| .+|.+..|+.+.. +...+++ +
T Consensus 22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~G---a~V~i~~r~~~~l---~~~~~~~---------------------g 74 (273)
T 4fgs_A 22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEG---ARVFITGRRKDVL---DAAIAEI---------------------G 74 (273)
T ss_dssp ---CTTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------C
T ss_pred hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHc---------------------C
Confidence 45667899999999999999999999999999 5668888875432 2222221 3
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~ 156 (399)
.++.++++|+++++......+...+.+.++|++||+||.... .+.|+..+++|+.++..+.+++.+. ++..+
T Consensus 75 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~ 154 (273)
T 4fgs_A 75 GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSS 154 (273)
T ss_dssp TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEE
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCe
Confidence 577889999997654322233333345679999999997532 3678999999999999999998764 34467
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||....... +....|+.+|.
T Consensus 155 IInisS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 178 (273)
T 4fgs_A 155 VVLTGSTAGSTGT--------------------------------------------------------PAFSVYAASKA 178 (273)
T ss_dssp EEEECCGGGGSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEeehhhccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999987543211 12357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcc-hHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLK-TINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
....+.+.. ..|+++..+.||.|-.+.... +..... ....+....... .| ..-+...+|+|+
T Consensus 179 av~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~----~P-----lgR~g~peeiA~ 246 (273)
T 4fgs_A 179 ALRSFARNWILDLKDRGIRINTLSPGPTETTGLVE---LAGKDPVQQQGLLNALAAQ----VP-----MGRVGRAEEVAA 246 (273)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEEEECSBCC------------CHHHHHHHHHHHHHH----ST-----TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH---hhccCchhhHHHHHHHHhc----CC-----CCCCcCHHHHHH
Confidence 999988866 568999999999997754311 111000 001111111111 11 112456789999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... --.|..+.+.++
T Consensus 247 ~v~FLaSd~a~-~iTG~~i~VDGG 269 (273)
T 4fgs_A 247 AALFLASDDSS-FVTGAELFVDGG 269 (273)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHhCchhc-CccCCeEeECcC
Confidence 99998864332 223788888776
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-17 Score=152.03 Aligned_cols=220 Identities=14% Similarity=0.091 Sum_probs=152.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.++||+++||||++.||.++++.|+++| .+|.+..|+.+..+.. ...++
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~G---a~Vv~~~~~~~~~~~~---------------------------~~~~~ 56 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELG---AEVVALGLDADGVHAP---------------------------RHPRI 56 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTSTTSC---------------------------CCTTE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHhhh---------------------------hcCCe
Confidence 34689999999999999999999999999 5668888887654221 23678
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHV 160 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~ 160 (399)
..+.+|+++++. .+...+.+.++|++||+||.... .+.|+..+++|+.++..+.+++.++ ++..++|++
T Consensus 57 ~~~~~Dv~~~~~----v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 132 (242)
T 4b79_A 57 RREELDITDSQR----LQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNI 132 (242)
T ss_dssp EEEECCTTCHHH----HHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEE
T ss_pred EEEEecCCCHHH----HHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 899999996542 12222345689999999997642 2568889999999999999887664 234689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||....... .....|+.||.....
T Consensus 133 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaav~~ 156 (242)
T 4b79_A 133 ASMYSTFGS--------------------------------------------------------ADRPAYSASKGAIVQ 156 (242)
T ss_dssp CCGGGTSCC--------------------------------------------------------SSCHHHHHHHHHHHH
T ss_pred eeccccCCC--------------------------------------------------------CCCHHHHHHHHHHHH
Confidence 998543211 123579999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..|+++..+-||.|-.+..... ... ........... | ..-+...+|+|++++.+
T Consensus 157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~---~~~----~~~~~~~~~~~----P-----lgR~g~peeiA~~v~fL 220 (242)
T 4b79_A 157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGL---KAD----VEATRRIMQRT----P-----LARWGEAPEVASAAAFL 220 (242)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCC--------CCC----HHHHHHHHHTC----T-----TCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc---cCC----HHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHH
Confidence 88765 5789999999999987643211 111 01122222211 1 11245678999999988
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+.... .--.+..+.+.++
T Consensus 221 aSd~a-~~iTG~~l~VDGG 238 (242)
T 4b79_A 221 CGPGA-SFVTGAVLAVDGG 238 (242)
T ss_dssp TSGGG-TTCCSCEEEESTT
T ss_pred hCchh-cCccCceEEECcc
Confidence 86332 2223778888776
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=157.35 Aligned_cols=221 Identities=16% Similarity=0.154 Sum_probs=127.7
Q ss_pred CCcccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 1 MELGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 1 ~~~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
|+...-...+++|+||||||+|+||.+++++|+++| .+|++.+|+..+.. ...+++ .
T Consensus 1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~~~---~~~~~l---------~-------- 57 (311)
T 3o26_A 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTKGH---EAVEKL---------K-------- 57 (311)
T ss_dssp -----------CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHH---HHHHHH---------H--------
T ss_pred CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHH---HHHHHH---------H--------
Confidence 555544566789999999999999999999999999 56788988864432 111111 1
Q ss_pred ccccCceEEEeccCCCC-CCCCCchhhHHHHhcCccEEEEcccccCc---------------------------------
Q 015874 81 SFISEKITFVPGDISSE-DLGLKDSNLKEELWNELDIMVNSAAITKF--------------------------------- 126 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~-~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------------------------------- 126 (399)
...+.++.++.+|++++ +......+.+.+.+.++|+|||+||....
T Consensus 58 ~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (311)
T 3o26_A 58 NSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQEL 137 (311)
T ss_dssp TTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTT
T ss_pred hcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcc
Confidence 11235789999999975 32111122222334589999999997531
Q ss_pred ----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEecceeecCcCC-c-cccccCCCCCCCChhHHHHHHHHHH
Q 015874 127 ----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAGERTG-L-ILENPLDGASGLDFDAEMKVIDQKL 197 (399)
Q Consensus 127 ----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS~~v~~~~~~-~-~~e~~~~~~~~~~~~~~~~~~~~~~ 197 (399)
.+.++..+++|+.|+..+++++... .+..+||++||...+..... . ..+...+. ............
T Consensus 138 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---- 212 (311)
T 3o26_A 138 MSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDG-DALTEERIDMVV---- 212 (311)
T ss_dssp EECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCG-GGCCHHHHHHHH----
T ss_pred cccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccc-cccchhHHHHHH----
Confidence 1345667999999999999988653 24579999999865432210 0 00000000 000111111010
Q ss_pred HhhhhcCCChhHHHHHHhhccccccccCC---CCchhhHhHHHHHHHHHHh---hCCCcEEEEecCceecC
Q 015874 198 NELKTKGAPQKEITLFMKNLGTERAKLHG---WPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~sK~~~E~~l~~~---~~~~~~~i~Rp~~V~G~ 262 (399)
..+.+.+......... ....|+.||.+.+.+.+.+ ..+++++.++||.|.++
T Consensus 213 -------------~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 213 -------------NMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp -------------HHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred -------------HHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 0111111111111112 2257999999999999877 23699999999988664
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-17 Score=150.40 Aligned_cols=212 Identities=15% Similarity=0.159 Sum_probs=140.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||+++++.|+++| ++|.+..|+.+. .+...+++ ..++.++.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~---------------------~~~~~~~~~ 53 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQER---LQELKDEL---------------------GDNLYIAQL 53 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH---------------------CTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHh---------------------cCceEEEEc
Confidence 689999999999999999999999 566888886532 22222211 246889999
Q ss_pred cCCCCCCCCCchhhHHHHh-------cCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCC
Q 015874 93 DISSEDLGLKDSNLKEELW-------NELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKL 154 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~ 154 (399)
|+++ .+....++ .++|++||+||... + .+.++..+++|+.++.++++++.+. .+.
T Consensus 54 Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 126 (248)
T 3asu_A 54 DVRN-------RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_dssp CTTC-------HHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9995 33333433 36899999999752 1 2467788999999999999887642 256
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+||++||...+... .....|+.+
T Consensus 127 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 150 (248)
T 3asu_A 127 GHIINIGSTAGSWPY--------------------------------------------------------AGGNVYGAT 150 (248)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred ceEEEEccchhccCC--------------------------------------------------------CCCchHHHH
Confidence 799999998654321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceec-CCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSG-TYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
|...+.+.+.. ..++++++++||.|.| +.... .+... ..... ... ....++..+|+
T Consensus 151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~--~~~~~----~~~~~--------~~~----~~~~~~~p~dv 212 (248)
T 3asu_A 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RFKGD----DGKAE--------KTY----QNTVALTPEDV 212 (248)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------CCBCHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh--cccCc----hHHHH--------HHH----hccCCCCHHHH
Confidence 99999998765 3589999999999984 33210 00000 00000 000 01123689999
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|++++.++...... .+..+.+...
T Consensus 213 A~~v~~l~s~~~~~--~g~~i~v~~~ 236 (248)
T 3asu_A 213 SEAVWWVSTLPAHV--NINTLEMMPV 236 (248)
T ss_dssp HHHHHHHHHSCTTC--CCCEEEECCT
T ss_pred HHHHHHHhcCCccc--eeeEEEEccc
Confidence 99999998742222 2455665443
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-17 Score=154.87 Aligned_cols=208 Identities=13% Similarity=0.119 Sum_probs=140.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
++||+|+||||+|+||++++++|+++| .+|.+..|+...... ++...+.+ . ..+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~---------~~~~ 62 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDG---ANVAIAAKSAVANPKLPGTIHSAAAAV---------N---------AAGG 62 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCSCCTTSCCCHHHHHHHH---------H---------HHTS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeccchhhhhhHHHHHHHHHHH---------H---------hcCC
Confidence 678999999999999999999999999 567888998754221 22222111 0 0136
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
++.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+++++.+. .+..
T Consensus 63 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g 142 (274)
T 3e03_A 63 QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP 142 (274)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc
Confidence 78999999996543111112222223579999999997532 2567888999999999999988653 2457
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+.... ......|+.||
T Consensus 143 ~iv~isS~~~~~~~~------------------------------------------------------~~~~~~Y~asK 168 (274)
T 3e03_A 143 HILTLAPPPSLNPAW------------------------------------------------------WGAHTGYTLAK 168 (274)
T ss_dssp EEEECCCCCCCCHHH------------------------------------------------------HHHCHHHHHHH
T ss_pred eEEEECChHhcCCCC------------------------------------------------------CCCCchHHHHH
Confidence 899999986543200 01135699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.+..... . . ...+. ....+...+|+|+
T Consensus 169 aal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---~---~-----------~~~~~---------~~~~~~~pedvA~ 222 (274)
T 3e03_A 169 MGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---I---N-----------MLPGV---------DAAACRRPEIMAD 222 (274)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------------CC---------CGGGSBCTHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---h---h-----------hcccc---------cccccCCHHHHHH
Confidence 9999998766 4589999999985332111 0 0 00000 1122567899999
Q ss_pred HHHHHHHh
Q 015874 311 AMIVAMVA 318 (399)
Q Consensus 311 ~i~~~~~~ 318 (399)
+++.++..
T Consensus 223 ~v~~l~s~ 230 (274)
T 3e03_A 223 AAHAVLTR 230 (274)
T ss_dssp HHHHHHTS
T ss_pred HHHHHhCc
Confidence 99999863
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=151.12 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=132.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+||||||+|+||++++++|+++|+ +|.+..|+.+.. +...+ + ...++.++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~~-------------~--------~~~~~~~~~~ 54 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK---ATYLTGRSESKL---STVTN-------------C--------LSNNVGYRAR 54 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCHHHH---HHHHH-------------T--------CSSCCCEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHH-------------H--------HhhccCeEee
Confidence 6899999999999999999999994 568888875332 22211 1 1357889999
Q ss_pred cCCCCCCCCCchhhHHHHhcC----ccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNE----LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~----~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~ 159 (399)
|+++ .+....++++ .|+|||+||.... .+.++..+++|+.++.++++++.+. +...++|+
T Consensus 55 D~~~-------~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 127 (230)
T 3guy_A 55 DLAS-------HQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVM 127 (230)
T ss_dssp CTTC-------HHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred cCCC-------HHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9995 4444455544 4999999997532 2567788999999999999988764 12238999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||...+... .....|+.+|.+.+
T Consensus 128 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 151 (230)
T 3guy_A 128 IMSTAAQQPK--------------------------------------------------------AQESTYCAVKWAVK 151 (230)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EeecccCCCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9998655421 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.+ ..++++..++||.|.++.... .. .......+++.+|+|++++.
T Consensus 152 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----------------~~---------~~~~~~~~~~~~dvA~~i~~ 205 (230)
T 3guy_A 152 GLIESVRLELKGKPMKIIAVYPGGMATEFWET-----------------SG---------KSLDTSSFMSAEDAALMIHG 205 (230)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeEEEEEECCcccChHHHh-----------------cC---------CCCCcccCCCHHHHHHHHHH
Confidence 998866 358999999999987643210 00 00113457889999999999
Q ss_pred HHHh
Q 015874 315 AMVA 318 (399)
Q Consensus 315 ~~~~ 318 (399)
++..
T Consensus 206 l~~~ 209 (230)
T 3guy_A 206 ALAN 209 (230)
T ss_dssp HCCE
T ss_pred HHhC
Confidence 8863
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=155.85 Aligned_cols=229 Identities=15% Similarity=0.051 Sum_probs=152.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||.++++.|+++| .+|.+..|+.+.. ++..+++. + .+.++.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~~~---~~~~~~l~---------~---------~g~~~~ 61 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRATLL---AESVDTLT---------R---------KGYDAH 61 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHHH---HHHHHHHH---------H---------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH---------h---------cCCcEE
Confidence 4789999999999999999999999999 5567777765432 22222221 0 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~---~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+ + ++..++
T Consensus 62 ~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~I 141 (255)
T 4g81_D 62 GVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKI 141 (255)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEE
Confidence 99999997554222222222334579999999997532 367899999999999999887654 2 244689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.+|..
T Consensus 142 VnisS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 165 (255)
T 4g81_D 142 INIGSLTSQAAR--------------------------------------------------------PTVAPYTAAKGG 165 (255)
T ss_dssp EEECCGGGTSBC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEeehhhcCCC--------------------------------------------------------CCchhHHHHHHH
Confidence 999998654321 223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
...+.+.. ..|+++..+-||.|..+.... .... . .+....... .| ..-+...+|+|+++
T Consensus 166 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~-~---~~~~~~~~~----~P-----l~R~g~pediA~~v 229 (255)
T 4g81_D 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA---LIED-K---QFDSWVKSS----TP-----SQRWGRPEELIGTA 229 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH---HHTC-H---HHHHHHHHH----ST-----TCSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc---ccCC-H---HHHHHHHhC----CC-----CCCCcCHHHHHHHH
Confidence 99888766 578999999999997654310 0010 0 111111111 11 11234557999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... .--.|..+.+.++
T Consensus 230 ~fL~S~~a-~~iTG~~i~VDGG 250 (255)
T 4g81_D 230 IFLSSKAS-DYINGQIIYVDGG 250 (255)
T ss_dssp HHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHhCchh-CCCcCCEEEECCC
Confidence 98886332 2223788888776
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.8e-17 Score=158.25 Aligned_cols=223 Identities=15% Similarity=0.145 Sum_probs=148.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
..++||+||||||+|+||.+++++|+++| .+|.+..|+.+.... ++...+++. ..
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~l~~~l~~~~~~~~------------------~~ 99 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDG---ANIVIAAKTAQPHPKLLGTIYTAAEEIE------------------AV 99 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHHH------------------HT
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCC---CEEEEEECChhhhhhhHHHHHHHHHHHH------------------hc
Confidence 35788999999999999999999999999 567888998765321 122221110 01
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
+.++.++.+|+++++......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 100 g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 179 (346)
T 3kvo_A 100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK 179 (346)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC
Confidence 3578899999996543111112222223489999999997532 2567888999999999999998653 24
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||...+.... ......|+.
T Consensus 180 ~g~IV~iSS~~~~~~~~------------------------------------------------------~~~~~~Y~a 205 (346)
T 3kvo_A 180 VAHILNISPPLNLNPVW------------------------------------------------------FKQHCAYTI 205 (346)
T ss_dssp SCEEEEECCCCCCCGGG------------------------------------------------------TSSSHHHHH
T ss_pred CCEEEEECCHHHcCCCC------------------------------------------------------CCCchHHHH
Confidence 57999999986554210 022357999
Q ss_pred hHHHHHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 234 TKTMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 234 sK~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
+|+..+.+.+.+ ..++++..+.||.+.... +... ..+. .....+...+|+|
T Consensus 206 SKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------------~~~~-~~~~--------~~~~r~~~pedvA 260 (346)
T 3kvo_A 206 AKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------------AMDM-LGGP--------GIESQCRKVDIIA 260 (346)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------------HHHH-HCC----------CGGGCBCTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------------HHHh-hccc--------cccccCCCHHHHH
Confidence 999999998876 357999999998533211 1111 1111 1123356789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
++++.++.. ... -.|.++ +.+
T Consensus 261 ~~v~~L~s~-~~~-itG~~i-vdg 281 (346)
T 3kvo_A 261 DAAYSIFQK-PKS-FTGNFV-IDE 281 (346)
T ss_dssp HHHHHHHTS-CTT-CCSCEE-EHH
T ss_pred HHHHHHHhc-CCC-CCceEE-ECC
Confidence 999999974 321 125555 544
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.5e-17 Score=150.39 Aligned_cols=220 Identities=12% Similarity=0.097 Sum_probs=142.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|+||+++++.|+++| ++|.+..|+.+.......+.+ . +.++.++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~l~~-------------~---------~~~~~~~-- 54 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAFAE-------------T---------YPQLKPM-- 54 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHHH-------------H---------CTTSEEC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHh-------------c---------CCcEEEE--
Confidence 689999999999999999999999 566888887654322211110 0 1233333
Q ss_pred cCCCCCCCCCchhhHH---HHhcCccEEEEccccc-Cc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 93 DISSEDLGLKDSNLKE---ELWNELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~---~~~~~~D~Vih~Aa~~-~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
|..+ ..+... +.+.++|+|||+||.. .. .+.++..+++|+.++.++++++.+. .+..+||
T Consensus 55 d~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 128 (254)
T 1zmt_A 55 SEQE------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 128 (254)
T ss_dssp CCCS------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 4332 222222 2345899999999976 21 2457788999999999999987642 2467999
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|...
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 152 (254)
T 1zmt_A 129 FITSATPFGPW--------------------------------------------------------KELSTYTSARAGA 152 (254)
T ss_dssp EECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCcccccCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCC--CCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPF--PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.+ ..++++++++||.|+|+....+ +.+... .......... .. ....+.+.+|+|++
T Consensus 153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~----~~-----p~~~~~~p~dvA~~ 220 (254)
T 1zmt_A 153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKK----VT-----ALQRLGTQKELGEL 220 (254)
T ss_dssp HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHH----HS-----SSSSCBCHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhc----cC-----CCCCCcCHHHHHHH
Confidence 9998766 3589999999999988764211 000000 0011111110 00 11236789999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++..... .-.+..+++.++
T Consensus 221 v~~l~s~~~~-~~tG~~~~vdgG 242 (254)
T 1zmt_A 221 VAFLASGSCD-YLTGQVFWLAGG 242 (254)
T ss_dssp HHHHHTTSCG-GGTTCEEEESTT
T ss_pred HHHHhCcccC-CccCCEEEECCC
Confidence 9998863221 112678999887
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=151.00 Aligned_cols=202 Identities=10% Similarity=0.035 Sum_probs=140.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+++|+++||||+|+||+++++.|+++| .+|.+..|+.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~--------------------------------------- 40 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEH---TIVHVASRQT--------------------------------------- 40 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTT---EEEEEESGGG---------------------------------------
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEecCCc---------------------------------------
Confidence 3678999999999999999999999999 5567776643
Q ss_pred EEeccCCCCCCCCCchhhHHHH---hcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~---~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~ 156 (399)
.+|++++ +....+ +.++|++||+||.... .+.++..+++|+.++.++++++.+. ++..+
T Consensus 41 --~~D~~~~-------~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~ 111 (223)
T 3uce_A 41 --GLDISDE-------KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGS 111 (223)
T ss_dssp --TCCTTCH-------HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred --ccCCCCH-------HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeE
Confidence 1688853 333333 3579999999997521 2567788999999999999999874 23358
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||...+... .....|+.+|.
T Consensus 112 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~ 135 (223)
T 3uce_A 112 ITLTSGMLSRKVV--------------------------------------------------------ANTYVKAAINA 135 (223)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEecchhhccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998755421 22357999999
Q ss_pred HHHHHHHHh--h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 237 MGEMLMQQS--K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 237 ~~E~~l~~~--~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
..+.+.+.+ + ..+++..++||.|.++...... . .....+....... .....+.+.+|+|++++
T Consensus 136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~---~--~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~~~ 201 (223)
T 3uce_A 136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMN---A--DDRDAMYQRTQSH---------LPVGKVGEASDIAMAYL 201 (223)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSC---H--HHHHHHHHHHHHH---------STTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcc---h--hhHHHHHHHHhhc---------CCCCCccCHHHHHHHHH
Confidence 999998876 2 2399999999999886542111 1 0011111111111 12345778999999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.. ... .+..+++.++
T Consensus 202 ~l~~~-~~~--tG~~i~vdgG 219 (223)
T 3uce_A 202 FAIQN-SYM--TGTVIDVDGG 219 (223)
T ss_dssp HHHHC-TTC--CSCEEEESTT
T ss_pred HHccC-CCC--CCcEEEecCC
Confidence 98873 222 2789999887
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-16 Score=148.08 Aligned_cols=230 Identities=14% Similarity=0.059 Sum_probs=152.5
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.++||+++||||+| .||.++++.|+++| .+|.+..|+.+..+.+.+ .+ ......+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~G---a~Vvi~~r~~~~~~~~~~---~~-----------------~~~~~~~ 59 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLG---AKLVFTYRKERSRKELEK---LL-----------------EQLNQPE 59 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHH---HH-----------------GGGTCSS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH---HH-----------------HhcCCCc
Confidence 47899999999987 89999999999999 566888887654332222 11 1112357
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
+.++++|+++++......+...+.+.++|++||+||.... .+.+...+++|+.+...+.+++... ++.
T Consensus 60 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T 4fs3_A 60 AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG 139 (256)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8899999997553222223333445689999999996431 1345566788999998888887664 344
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||....... .....|+.|
T Consensus 140 G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~as 163 (256)
T 4fs3_A 140 GSIVATTYLGGEFAV--------------------------------------------------------QNYNVMGVA 163 (256)
T ss_dssp EEEEEEECGGGTSCC--------------------------------------------------------TTTHHHHHH
T ss_pred CEEEEEeccccccCc--------------------------------------------------------ccchhhHHH
Confidence 689999987532211 223579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..|+++..+.||.|-.+..... .............. | ..-+...+|+|
T Consensus 164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----P-----l~R~g~peevA 227 (256)
T 4fs3_A 164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV-------GGFNTILKEIKERA----P-----LKRNVDQVEVG 227 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-------TTHHHHHHHHHHHS----T-----TSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-------cCCHHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99999888765 5689999999999877543211 11112222222211 1 11245678999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++++.++.... .--.|..+.+.++
T Consensus 228 ~~v~fL~Sd~a-~~iTG~~i~VDGG 251 (256)
T 4fs3_A 228 KTAAYLLSDLS-SGVTGENIHVDSG 251 (256)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhCchh-cCccCCEEEECcC
Confidence 99998886332 2223788888776
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-16 Score=147.94 Aligned_cols=235 Identities=14% Similarity=0.032 Sum_probs=147.8
Q ss_pred hhcCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..+++|+|+|||| +|+||+++++.|+++| .+|.+..|+.... .+.+. ++ .+.
T Consensus 3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G---~~V~~~~r~~~~~--~~~~~-------------~~--------~~~ 56 (269)
T 2h7i_A 3 GLLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLRL--IQRIT-------------DR--------LPA 56 (269)
T ss_dssp CTTTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEECSCHHH--HHHHH-------------TT--------SSS
T ss_pred cccCCCEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecChHHH--HHHHH-------------Hh--------cCC
Confidence 3478899999999 9999999999999999 5568888875321 11111 11 124
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhc---CccEEEEcccccC--------c----cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWN---ELDIMVNSAAITK--------F----DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~---~~D~Vih~Aa~~~--------~----~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
++.++.+|+++++......+...+.+. ++|++||+||... + .+.++..+++|+.++.++++++.+
T Consensus 57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 136 (269)
T 2h7i_A 57 KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLP 136 (269)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 678899999964321111111112233 8999999999753 1 245677899999999999999876
Q ss_pred c-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCc
Q 015874 151 C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPN 229 (399)
Q Consensus 151 ~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
. .+..+||++||...++. ....
T Consensus 137 ~~~~~g~iv~iss~~~~~~---------------------------------------------------------~~~~ 159 (269)
T 2h7i_A 137 IMNPGGSIVGMDFDPSRAM---------------------------------------------------------PAYN 159 (269)
T ss_dssp GEEEEEEEEEEECCCSSCC---------------------------------------------------------TTTH
T ss_pred hhccCCeEEEEcCcccccc---------------------------------------------------------CchH
Confidence 4 22358999998764321 1235
Q ss_pred hhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCC-CCcccC-cc-hHHHHHHHhhcCccccccCCCccccC
Q 015874 230 TYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF-PGWVED-LK-TINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 230 ~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
.|+.+|...+.+.+.+ ..+++++.++||.|..+..... ...... .. ....+...... ..+- .+.
T Consensus 160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~----~rr 231 (269)
T 2h7i_A 160 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ----RAPI----GWN 231 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH----HCTT----CCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhc----cCCc----ccC
Confidence 7999999999988766 4589999999998866421000 000000 00 00000011101 0000 113
Q ss_pred eeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+...+|+|++++.++... ...-.+..+.+.++
T Consensus 232 ~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG 263 (269)
T 2h7i_A 232 MKDATPVAKTVCALLSDW-LPATTGDIIYADGG 263 (269)
T ss_dssp TTCCHHHHHHHHHHHSSS-CTTCCSEEEEESTT
T ss_pred CCCHHHHHHHHHHHhCch-hccCcceEEEecCC
Confidence 556789999999988632 22223778888776
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=148.79 Aligned_cols=214 Identities=13% Similarity=0.112 Sum_probs=147.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|+||||||++.||+++++.|+++| .+|.+..|+++.. +.+.+ + ..++.+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~---~~~~~-------------~---------~~~~~~~~ 53 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDEKRS---ADFAK-------------E---------RPNLFYFH 53 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHT-------------T---------CTTEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHH-------------h---------cCCEEEEE
Confidence 4899999999999999999999999 5567777764322 11111 1 25788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEec
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVST 162 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~SS 162 (399)
+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|++||
T Consensus 54 ~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS 133 (247)
T 3ged_A 54 GDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEee
Confidence 99997654322233333445689999999997532 3678999999999999999887653 23478999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
....... .....|+.||.....+.
T Consensus 134 ~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~lt 157 (247)
T 3ged_A 134 TRAFQSE--------------------------------------------------------PDSEAYASAKGGIVALT 157 (247)
T ss_dssp GGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHHHH
T ss_pred cccccCC--------------------------------------------------------CCCHHHHHHHHHHHHHH
Confidence 8643321 12357999999999888
Q ss_pred HHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 243 QQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 243 ~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
+.. .+++++..+.||.|-.+.... +. ..... .+| ..-+...+|+|++++.++..
T Consensus 158 k~lA~ela~~IrVN~I~PG~i~t~~~~~---~~----------~~~~~----~~P-----l~R~g~pediA~~v~fL~s~ 215 (247)
T 3ged_A 158 HALAMSLGPDVLVNCIAPGWINVTEQQE---FT----------QEDCA----AIP-----AGKVGTPKDISNMVLFLCQQ 215 (247)
T ss_dssp HHHHHHHTTTSEEEEEEECSBCCCC------CC----------HHHHH----TST-----TSSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCEEEEEecCcCCCCCcHH---HH----------HHHHh----cCC-----CCCCcCHHHHHHHHHHHHhC
Confidence 766 458999999999986544311 11 11111 111 11245678999999998862
Q ss_pred ccCCCCCCcEEEecCC
Q 015874 319 HAKQPSDANIYHVGSS 334 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~ 334 (399)
. --.|..+.+.++
T Consensus 216 -~--~iTG~~i~VDGG 228 (247)
T 3ged_A 216 -D--FITGETIIVDGG 228 (247)
T ss_dssp -S--SCCSCEEEESTT
T ss_pred -C--CCCCCeEEECcC
Confidence 2 223788999887
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=150.91 Aligned_cols=205 Identities=11% Similarity=0.080 Sum_probs=134.0
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...|. |+||||||+|+||++++++|+++| ++|.+..|+.+. ++...+++ .. ..+
T Consensus 17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G---~~V~~~~r~~~~---~~~~~~~~-------------~~------~~~ 70 (272)
T 2nwq_A 17 GSHMS-STLFITGATSGFGEACARRFAEAG---WSLVLTGRREER---LQALAGEL-------------SA------KTR 70 (272)
T ss_dssp ----C-CEEEESSTTTSSHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH-------------TT------TSC
T ss_pred CCCcC-cEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh-------------hc------CCc
Confidence 34566 899999999999999999999999 566888886532 22222211 00 136
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh-------cCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELW-------NELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~-------~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+.++.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.++.++++++.+.
T Consensus 71 ~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 143 (272)
T 2nwq_A 71 VLPLTLDVRD-------RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPR 143 (272)
T ss_dssp EEEEECCTTC-------HHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999995 34333443 347999999997532 2567888999999999988877542
Q ss_pred ---cCCc-eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCC
Q 015874 152 ---VKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGW 227 (399)
Q Consensus 152 ---~~~~-~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
.+.. +||++||...+... ..
T Consensus 144 m~~~~~g~~IV~isS~~~~~~~--------------------------------------------------------~~ 167 (272)
T 2nwq_A 144 LIAHGAGASIVNLGSVAGKWPY--------------------------------------------------------PG 167 (272)
T ss_dssp HHHHCTTCEEEEECCGGGTSCC--------------------------------------------------------TT
T ss_pred HHhcCCCcEEEEeCCchhccCC--------------------------------------------------------CC
Confidence 2456 99999998654321 12
Q ss_pred CchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCe
Q 015874 228 PNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDV 302 (399)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
...|+.+|...+.+.+.+ ..|+++++++||.|.++..... +... ..... .... ...+
T Consensus 168 ~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~----~~~~~--------~~~~----~~~~ 229 (272)
T 2nwq_A 168 SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGD----QARYD--------KTYA----GAHP 229 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------------------CCCC
T ss_pred CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccc----hHHHH--------Hhhc----cCCC
Confidence 357999999999998876 3589999999999987543100 0000 00000 0000 1124
Q ss_pred eeHHHHHHHHHHHHHh
Q 015874 303 IPVDMVVNAMIVAMVA 318 (399)
Q Consensus 303 i~v~Dva~~i~~~~~~ 318 (399)
+..+|+|++++.++..
T Consensus 230 ~~pedvA~~v~~l~s~ 245 (272)
T 2nwq_A 230 IQPEDIAETIFWIMNQ 245 (272)
T ss_dssp BCHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhCC
Confidence 6899999999999873
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-15 Score=141.75 Aligned_cols=222 Identities=14% Similarity=0.062 Sum_probs=151.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||.++++.|+++| .+|.+..|+..+ +..+.+++ .+.++.
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~G---a~Vvi~~r~~~~-~~~~~~~~----------------------~g~~~~ 59 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAG---AEVVCAARRAPD-ETLDIIAK----------------------DGGNAS 59 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCCH-HHHHHHHH----------------------TTCCEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcC---CEEEEEeCCcHH-HHHHHHHH----------------------hCCcEE
Confidence 3889999999999999999999999999 556777886542 12222221 146788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-c--c-CCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C--V-KLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~--~-~~~~~ 157 (399)
++.+|+++++...... ...++|++||+||.... .+.|+..+++|+.++..+.+++.+ + + +..++
T Consensus 60 ~~~~Dv~d~~~v~~~~-----~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~I 134 (247)
T 4hp8_A 60 ALLIDFADPLAAKDSF-----TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKV 134 (247)
T ss_dssp EEECCTTSTTTTTTSS-----TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEccCCCHHHHHHHH-----HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEE
Confidence 9999999876433221 12579999999997542 367899999999999999987654 2 2 34689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.||..
T Consensus 135 VnisS~~~~~g~--------------------------------------------------------~~~~~Y~asKaa 158 (247)
T 4hp8_A 135 VNIASLLSFQGG--------------------------------------------------------IRVPSYTAAKHG 158 (247)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHHH
T ss_pred EEEechhhCCCC--------------------------------------------------------CCChHHHHHHHH
Confidence 999998543211 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
...+.+.. ..|+++..+-||.|-.+.... +... .......... +| ..-+...+|+|.++
T Consensus 159 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~---~~~~----~~~~~~~~~~----~P-----lgR~g~peeiA~~v 222 (247)
T 4hp8_A 159 VAGLTKLLANEWAAKGINVNAIAPGYIETNNTEA---LRAD----AARNKAILER----IP-----AGRWGHSEDIAGAA 222 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---HHTS----HHHHHHHHTT----CT-----TSSCBCTHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhh---cccC----HHHHHHHHhC----CC-----CCCCcCHHHHHHHH
Confidence 99988765 678999999999987643310 0000 0111111111 11 11244568999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... +--.+..+.+.++
T Consensus 223 ~fLaSd~a-~~iTG~~i~VDGG 243 (247)
T 4hp8_A 223 VFLSSAAA-DYVHGAILNVDGG 243 (247)
T ss_dssp HHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHhCchh-cCCcCCeEEECcc
Confidence 98886332 2223788888776
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=148.15 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=138.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHH---hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILR---VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~---~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+++|+|+||||+|+||++++++|++ +| .+|.+..|+.+.. +...+++ ... ..+.+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G---~~V~~~~r~~~~~---~~~~~~l---------~~~-------~~~~~ 61 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESML---RQLKEEL---------GAQ-------QPDLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHHH---HHHHHHH---------HHH-------CTTSE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCC---CeEEEEeCCHHHH---HHHHHHH---------Hhh-------CCCCe
Confidence 6789999999999999999999998 79 5668888865332 2222111 100 01257
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc-----Ccc--EEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHH
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN-----ELD--IMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAK 149 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~-----~~D--~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~ 149 (399)
+.++.+|+++++. ..+....+.+ ++| ++||+||.... .+.++..+++|+.++.++++++.
T Consensus 62 ~~~~~~Dv~~~~~---v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 138 (259)
T 1oaa_A 62 VVLAAADLGTEAG---VQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTL 138 (259)
T ss_dssp EEEEECCTTSHHH---HHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEecCCCCHHH---HHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999996432 1222222222 568 99999997421 24577789999999999999987
Q ss_pred hc-c----CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccccc
Q 015874 150 KC-V----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKL 224 (399)
Q Consensus 150 ~~-~----~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (399)
+. . +..+||++||...+...
T Consensus 139 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 163 (259)
T 1oaa_A 139 NAFQDSPGLSKTVVNISSLCALQPY------------------------------------------------------- 163 (259)
T ss_dssp HTSCCCTTCEEEEEEECCGGGTSCC-------------------------------------------------------
T ss_pred HHHhhccCCCceEEEEcCchhcCCC-------------------------------------------------------
Confidence 64 1 23579999998765421
Q ss_pred CCCCchhhHhHHHHHHHHHHh--h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccC
Q 015874 225 HGWPNTYVFTKTMGEMLMQQS--K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMD 301 (399)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~~--~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
.....|+.+|...+.+.+.+ + .+++++.+.||.|-.+.... ....... ......... .. ....
T Consensus 164 -~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~---~~~~~~~-~~~~~~~~~----~~-----p~~~ 229 (259)
T 1oaa_A 164 -KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL---ARETSKD-PELRSKLQK----LK-----SDGA 229 (259)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHH---HHHHCSC-HHHHHHHHH----HH-----HTTC
T ss_pred -CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHH---HhhccCC-hhHHHHHHH----hh-----hcCC
Confidence 12357999999999999876 2 24889999998875422100 0000000 000000000 00 1234
Q ss_pred eeeHHHHHHHHHHHHHh
Q 015874 302 VIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 302 ~i~v~Dva~~i~~~~~~ 318 (399)
+...+|+|++++.++..
T Consensus 230 ~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 230 LVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp SBCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 67899999999998874
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=150.02 Aligned_cols=170 Identities=17% Similarity=0.203 Sum_probs=121.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+|+|+||||+|+||+++++.|+++| ++|.+..|+.+.. +...+++ .. .+.++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 58 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAG---ATVYITGRHLDTL---RVVAQEA---------QS---------LGGQCVP 58 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------HH---------HSSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHH---------HH---------cCCceEE
Confidence 678999999999999999999999999 5668888865332 2222111 00 1257889
Q ss_pred EeccCCCCCCCCCchhhHHHH----hcCccEEEEccc--cc--------Cc----cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 90 VPGDISSEDLGLKDSNLKEEL----WNELDIMVNSAA--IT--------KF----DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~----~~~~D~Vih~Aa--~~--------~~----~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+.+|+++++. ..+....+ +.++|++||+|| .. .+ .+.++..+++|+.++.++.+++.+.
T Consensus 59 ~~~Dv~~~~~---v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 135 (260)
T 2qq5_A 59 VVCDSSQESE---VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARL 135 (260)
T ss_dssp EECCTTSHHH---HHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred EECCCCCHHH---HHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHH
Confidence 9999996542 11222222 457899999994 32 11 2457788899999998888776542
Q ss_pred ---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCC
Q 015874 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWP 228 (399)
Q Consensus 152 ---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
.+..+||++||...+.. .+.
T Consensus 136 ~~~~~~g~iv~isS~~~~~~---------------------------------------------------------~~~ 158 (260)
T 2qq5_A 136 MVPAGQGLIVVISSPGSLQY---------------------------------------------------------MFN 158 (260)
T ss_dssp HGGGTCCEEEEECCGGGTSC---------------------------------------------------------CSS
T ss_pred HhhcCCcEEEEEcChhhcCC---------------------------------------------------------CCC
Confidence 24578999999865431 112
Q ss_pred chhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 229 NTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
..|+.+|...+.+.+.+ ..++++++++||.|.++.
T Consensus 159 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 159 VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 57999999999998766 458999999999998764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=158.73 Aligned_cols=226 Identities=16% Similarity=0.104 Sum_probs=147.8
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
...+++++++||||+|+||.++++.|+++| .+|.++.|+.... ......+. .+
T Consensus 208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~G---a~Vvl~~r~~~~~-~l~~~~~~-----------------------~~ 260 (454)
T 3u0b_A 208 DKPLDGKVAVVTGAARGIGATIAEVFARDG---ATVVAIDVDGAAE-DLKRVADK-----------------------VG 260 (454)
T ss_dssp TSTTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECGGGHH-HHHHHHHH-----------------------HT
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHCC---CEEEEEeCCccHH-HHHHHHHH-----------------------cC
Confidence 345689999999999999999999999999 5567777764321 11111111 24
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcC-ccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNE-LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~-~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
+.++.+|+++++......+...+.+.+ +|+|||+||.... .+.++..+++|+.++.++.+++... ++..
T Consensus 261 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g 340 (454)
T 3u0b_A 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG 340 (454)
T ss_dssp CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 568899999765322111111122234 9999999998642 2567888999999999999998764 1456
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.+|
T Consensus 341 ~iV~iSS~a~~~g~--------------------------------------------------------~g~~~YaasK 364 (454)
T 3u0b_A 341 RVIGLSSMAGIAGN--------------------------------------------------------RGQTNYATTK 364 (454)
T ss_dssp EEEEECCHHHHHCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEEeChHhCCCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999998644321 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|++++.+.||.|.++.....+.... ..... . .....+...+|+|+
T Consensus 365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~--------~----~~l~r~g~pedvA~ 426 (454)
T 3u0b_A 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR------EVGRR--------L----NSLFQGGQPVDVAE 426 (454)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C------HHHHH--------S----BTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH------HHHHh--------h----ccccCCCCHHHHHH
Confidence 9888777655 468999999999998754321110000 00000 0 01223457899999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++.... ..-.+.++++.++
T Consensus 427 ~v~fL~s~~a-~~itG~~i~vdGG 449 (454)
T 3u0b_A 427 LIAYFASPAS-NAVTGNTIRVCGQ 449 (454)
T ss_dssp HHHHHHCGGG-TTCCSCEEEESSS
T ss_pred HHHHHhCCcc-CCCCCcEEEECCc
Confidence 9999886332 2223788988876
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-16 Score=146.78 Aligned_cols=227 Identities=13% Similarity=0.116 Sum_probs=148.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||.++++.|+++| .+|.+..|+..+. ..+..
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~-------------------------------~~~~~ 53 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELG---AQVLTTARARPEG-------------------------------LPEEL 53 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTT---CEEEEEESSCCTT-------------------------------SCTTT
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcC---CEEEEEECCchhC-------------------------------CCcEE
Confidence 4799999999999999999999999999 5668888875432 12344
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
++++|+++++......+...+.+.++|++||+||... + .+.++..+++|+.++..+.+++.+. ++..+
T Consensus 54 ~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 133 (261)
T 4h15_A 54 FVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGV 133 (261)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCce
Confidence 7889999765422222333334567999999998642 1 2568889999999999998887653 35578
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||........ .....|+.||.
T Consensus 134 Iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~asKa 158 (261)
T 4h15_A 134 VVHVTSIQRVLPLP-------------------------------------------------------ESTTAYAAAKA 158 (261)
T ss_dssp EEEECCGGGTSCCT-------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEEehhhccCCC-------------------------------------------------------CccHHHHHHHH
Confidence 99999875332110 11356999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCC-c----ccCcchHHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-W----VEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
..+.+.+.. ..|+++..+.||.|-.+....... . ................ .+ ...-+...+
T Consensus 159 al~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----PlgR~g~pe 229 (261)
T 4h15_A 159 ALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLG----GI-----PLGRPAKPE 229 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT----CC-----TTSSCBCHH
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhc----CC-----CCCCCcCHH
Confidence 999888765 568999999999886642200000 0 0000000001111111 01 112356788
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|++++.++.... .--.|..+.+.++
T Consensus 230 evA~~v~fLaS~~a-~~itG~~i~VDGG 256 (261)
T 4h15_A 230 EVANLIAFLASDRA-ASITGAEYTIDGG 256 (261)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-cCccCcEEEECCc
Confidence 99999999886332 2223788888876
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.3e-16 Score=157.54 Aligned_cols=203 Identities=21% Similarity=0.185 Sum_probs=143.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+..+++||||||+|+||.++++.|+++|++ +|.+++|+.......+++.+++.+ .+.++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~------------------~g~~v~ 282 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELEA------------------LGARTT 282 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHHH------------------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC--EEEEEcCCCCCcHHHHHHHHHHHh------------------cCCEEE
Confidence 456899999999999999999999999953 378888876433333333222210 135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcC------ccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNE------LDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~------~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~ 155 (399)
++.+|+++ .+.+..++++ +|+|||+||.... .+.+...++.|+.++.++.+++... +..
T Consensus 283 ~~~~Dv~d-------~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~ 354 (486)
T 2fr1_A 283 VAACDVTD-------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLT 354 (486)
T ss_dssp EEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCS
T ss_pred EEEeCCCC-------HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCC
Confidence 99999995 4444455443 5999999997642 2456777889999999999999885 788
Q ss_pred eEEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 156 VFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 156 ~~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
+||++||++. ++.. ....|+.+
T Consensus 355 ~~V~~SS~a~~~g~~---------------------------------------------------------g~~~Yaaa 377 (486)
T 2fr1_A 355 AFVLFSSFASAFGAP---------------------------------------------------------GLGGYAPG 377 (486)
T ss_dssp EEEEEEEHHHHTCCT---------------------------------------------------------TCTTTHHH
T ss_pred EEEEEcChHhcCCCC---------------------------------------------------------CCHHHHHH
Confidence 9999999744 3321 13569999
Q ss_pred HHHHHHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 235 KTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 235 K~~~E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
|...+.+.... ..|+++++++||.+.+.... .. ... ..+. ...+..++.+|+++++.
T Consensus 378 ka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~------~~------~~~-------~~~~---~~g~~~i~~e~~a~~l~ 435 (486)
T 2fr1_A 378 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA------EG------PVA-------DRFR---RHGVIEMPPETACRALQ 435 (486)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------CT---TTTEECBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCeeCCCccc------ch------hHH-------HHHH---hcCCCCCCHHHHHHHHH
Confidence 99999888766 67999999999998774320 10 000 0010 12346789999999999
Q ss_pred HHHHh
Q 015874 314 VAMVA 318 (399)
Q Consensus 314 ~~~~~ 318 (399)
.++..
T Consensus 436 ~~l~~ 440 (486)
T 2fr1_A 436 NALDR 440 (486)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99974
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-16 Score=151.44 Aligned_cols=173 Identities=10% Similarity=0.080 Sum_probs=121.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+||||+|+||++++++|+++|++| +++.|+........+..+.+ +. ....+.++.++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v---~~v~r~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~ 62 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQS---FKVYATLRDLKTQGRLWEAA-------------RA--LACPPGSLETL 62 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCC---EEEEEEESCGGGTHHHHHHH-------------HH--TTCCTTSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCce---EEEEeecCcHHHHHHHHHHh-------------hh--ccCCCCceEEE
Confidence 36899999999999999999999999654 56666544432222211110 00 00012578899
Q ss_pred eccCCCCCCCCCchhhHHHHhc-----CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 91 PGDISSEDLGLKDSNLKEELWN-----ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
.+|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.++.++++++... .+..
T Consensus 63 ~~Dv~d-------~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g 135 (327)
T 1jtv_A 63 QLDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (327)
T ss_dssp ECCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EecCCC-------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999995 444444444 49999999997532 2457788999999999999987432 2568
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+||++||...+... .....|+.||
T Consensus 136 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~aSK 159 (327)
T 1jtv_A 136 RVLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASK 159 (327)
T ss_dssp EEEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCcccccCC--------------------------------------------------------CCChHHHHHH
Confidence 99999998654321 1135799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCC
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
+..+.+.+.+ ..++++++++||.|.++..
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 9999998866 3689999999999987653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=147.38 Aligned_cols=217 Identities=12% Similarity=0.076 Sum_probs=135.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-E--ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-V--RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~--R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
||+|+||||+|+||+++++.|+++| ++|.+. . |+.+. .+...+ +. ....
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~r~~~~---~~~~~~-------------~~---------~~~~ 52 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDG---YTVVCHDASFADAAE---RQRFES-------------EN---------PGTI 52 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHH---HHHHHH-------------HS---------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCcCCHHH---HHHHHH-------------Hh---------CCCc
Confidence 5799999999999999999999999 456777 4 65432 122111 10 0111
Q ss_pred EEeccCCCCCCCCCchhhHHHH---hcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHhc---c
Q 015874 89 FVPGDISSEDLGLKDSNLKEEL---WNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKKC---V 152 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~---~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~~---~ 152 (399)
+. |..+ ..+....+ +.++|+|||+||.... .+.++..+++|+.++.++++++.+. .
T Consensus 53 ~~--~~~~------v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (244)
T 1zmo_A 53 AL--AEQK------PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA 124 (244)
T ss_dssp EC--CCCC------GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cc--CHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 11 3221 22333232 3479999999997533 2457788999999999999987642 2
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
+..+||++||...+... .....|+
T Consensus 125 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 148 (244)
T 1zmo_A 125 GGASVIFITSSVGKKPL--------------------------------------------------------AYNPLYG 148 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCTTHH
T ss_pred CCcEEEEECChhhCCCC--------------------------------------------------------CCchHHH
Confidence 46789999998655421 1235799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.+|...+.+.+.+ ..++++++++||.|.++... ....... .......... .. ....+...+|
T Consensus 149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~-~~~~~~~~~~---~~-----p~~r~~~pe~ 215 (244)
T 1zmo_A 149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF----PTSDWEN-NPELRERVDR---DV-----PLGRLGRPDE 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB----CHHHHHH-CHHHHHHHHH---HC-----TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc----ccccccc-hHHHHHHHhc---CC-----CCCCCcCHHH
Confidence 9999999998766 45899999999998764320 0000000 0011111100 00 1123678899
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++..... .-.+..+.+.++
T Consensus 216 vA~~v~~l~s~~~~-~~tG~~i~vdgG 241 (244)
T 1zmo_A 216 MGALITFLASRRAA-PIVGQFFAFTGG 241 (244)
T ss_dssp HHHHHHHHHTTTTG-GGTTCEEEESTT
T ss_pred HHHHHHHHcCcccc-CccCCEEEeCCC
Confidence 99999998863221 112678888765
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-15 Score=153.39 Aligned_cols=224 Identities=15% Similarity=0.151 Sum_probs=153.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+..+++||||||+|+||.++++.|+++|++ .|.++.|+.......+.+.+++.+ .+.++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~------------------~g~~v~ 315 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE--RLVLTSRRGPEAPGAAELAEELRG------------------HGCEVV 315 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHT------------------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc--EEEEEecCCcccHHHHHHHHHHHh------------------cCCEEE
Confidence 456799999999999999999999999952 478888876433233333222210 135789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
++.+|+++ .+.+..+++ .+|+|||+||.... .+.++..++.|+.++.++.+++....+..+||+
T Consensus 316 ~~~~Dvtd-------~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~ 388 (511)
T 2z5l_A 316 HAACDVAE-------RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVL 388 (511)
T ss_dssp EEECCSSC-------HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEE
T ss_pred EEEeCCCC-------HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 99999994 454545554 49999999997643 245677889999999999998876435789999
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||+. +++.. ....|+.+|...
T Consensus 389 ~SS~a~~~g~~---------------------------------------------------------g~~~YaaaKa~l 411 (511)
T 2z5l_A 389 FSSVTGTWGNA---------------------------------------------------------GQGAYAAANAAL 411 (511)
T ss_dssp EEEGGGTTCCT---------------------------------------------------------TBHHHHHHHHHH
T ss_pred EeCHHhcCCCC---------------------------------------------------------CCHHHHHHHHHH
Confidence 99974 34421 125799999999
Q ss_pred HHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 239 EMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 239 E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
|.+.+.. ..|+++++++||.+.+.. +.... . ..... ...+..++.+|+++++..++.
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~tg------m~~~~-~----~~~~~-----------~~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGGG------MAAGA-G----EESLS-----------RRGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCSTT------CCCCH-H----HHHHH-----------HHTBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEECCcccCCc------ccccc-c----HHHHH-----------hcCCCCCCHHHHHHHHHHHHh
Confidence 9999877 679999999999873321 11110 0 01110 112356889999999999997
Q ss_pred hccCCCCCCcEEEecCCCCCcccHHHHHHHHH
Q 015874 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~ 349 (399)
.... .+.+ .. +.|..+...+.
T Consensus 470 ~~~~------~v~v-~~----~d~~~~~~~~~ 490 (511)
T 2z5l_A 470 RNDV------CVTV-VD----VDWERFAPATN 490 (511)
T ss_dssp HTCS------EEEE-CC----BCHHHHHHHHH
T ss_pred CCCC------EEEE-Ee----CCHHHHHhhhc
Confidence 4322 2323 22 45777765544
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-16 Score=150.95 Aligned_cols=214 Identities=16% Similarity=0.188 Sum_probs=136.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
+.||+|+||||+|+||.++++.|+++|+ +|.+..|... .....+...+++ ...
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga---~Vv~~~~~~~~~~~~R~~~~~~~~~~~l---------~~~--------- 65 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVVEEI---------RRR--------- 65 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHHHHH---------HHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCcccccccCCHHHHHHHHHHH---------Hhh---------
Confidence 6789999999999999999999999994 5566544211 111222222221 100
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
.. ...+|+++.+......+...+.+.++|+|||+||.... .+.++..+++|+.++.++++++.+. .+
T Consensus 66 ~~---~~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 142 (319)
T 1gz6_A 66 GG---KAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN 142 (319)
T ss_dssp TC---EEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CC---eEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 01 12478886542111111122234579999999997542 2457788999999999999987542 25
Q ss_pred CceEEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 154 LKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 154 ~~~~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
..+||++||... ++. .....|+
T Consensus 143 ~grIV~vsS~~~~~~~---------------------------------------------------------~~~~~Y~ 165 (319)
T 1gz6_A 143 YGRIIMTASASGIYGN---------------------------------------------------------FGQANYS 165 (319)
T ss_dssp CEEEEEECCHHHHHCC---------------------------------------------------------TTCHHHH
T ss_pred CCEEEEECChhhccCC---------------------------------------------------------CCCHHHH
Confidence 679999999743 332 1135799
Q ss_pred HhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 233 FTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 233 ~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
.||...+.+.+.+ ..|+++++++||.+ .+.. ..... .....++..+|
T Consensus 166 aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~---~~~~~------------------------~~~~~~~~p~d 217 (319)
T 1gz6_A 166 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT---ETVMP------------------------EDLVEALKPEY 217 (319)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT---GGGSC------------------------HHHHHHSCGGG
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc---cccCC------------------------hhhhccCCHHH
Confidence 9999999988766 35899999999986 3211 00000 01112456789
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|.+++.++... . ...+.+|++.++
T Consensus 218 vA~~~~~l~s~~-~-~~tG~~~~v~GG 242 (319)
T 1gz6_A 218 VAPLVLWLCHES-C-EENGGLFEVGAG 242 (319)
T ss_dssp THHHHHHHTSTT-C-CCCSCEEEEETT
T ss_pred HHHHHHHHhCch-h-hcCCCEEEECCC
Confidence 999999888632 1 122677877554
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=139.33 Aligned_cols=241 Identities=12% Similarity=0.097 Sum_probs=140.9
Q ss_pred cCCcEEEEecCc--chhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVT--GFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGat--G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+++|+|+||||+ |+||.+++++|+++| .+|.+..|+........... ...++.+ .+... .......
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~-----~~~~~~~-~~~~~---~~~~~~~ 73 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLR-----RGKFDQS-RVLPD---GSLMEIK 73 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHH-----TTTTTGG-GBCTT---SSBCCEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEeeccccchhhhhhhh-----hhHhhhh-hhhcc---ccccccc
Confidence 678999999999 999999999999999 55677776521000000000 0000000 00000 0000012
Q ss_pred EEEecc--------CC----C--------CCCCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhH
Q 015874 88 TFVPGD--------IS----S--------EDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINT 138 (399)
Q Consensus 88 ~~~~gD--------l~----~--------~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~ 138 (399)
..+.+| +. + ++......+...+.+.++|++||+||... + .+.++..+++|+
T Consensus 74 ~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 153 (297)
T 1d7o_A 74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASS 153 (297)
T ss_dssp EEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred cccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhh
Confidence 333333 22 1 21111011111122357999999998531 1 245778899999
Q ss_pred HHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 015874 139 LGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (399)
Q Consensus 139 ~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (399)
.++.++++++.+. .+..+||++||...+....
T Consensus 154 ~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------------------------------------------- 186 (297)
T 1d7o_A 154 YSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------------------------------------------- 186 (297)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------------------------------------------
T ss_pred hHHHHHHHHHHHHhccCceEEEEeccccccCCC-----------------------------------------------
Confidence 9999999999874 2236899999986433111
Q ss_pred cccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccc
Q 015874 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (399)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (399)
.....|+.+|...+.+.+.+ . .|++++.++||.|.++..... .....+........
T Consensus 187 --------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~--- 248 (297)
T 1d7o_A 187 --------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA--- 248 (297)
T ss_dssp --------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS---
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC---
Confidence 11146999999999988765 2 589999999999998764211 01111111111110
Q ss_pred ccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 292 ~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
....+...+|+|++++.++..... .-.+..+++.++
T Consensus 249 ------p~~r~~~pedvA~~v~~l~s~~~~-~itG~~i~vdgG 284 (297)
T 1d7o_A 249 ------PIQKTLTADEVGNAAAFLVSPLAS-AITGATIYVDNG 284 (297)
T ss_dssp ------SSCCCBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred ------CCCCCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 012356889999999988863222 222778999887
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.9e-14 Score=144.45 Aligned_cols=202 Identities=14% Similarity=0.122 Sum_probs=141.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++++|||||+|+||.++++.|+++|.. .|.+..|+.......+++.+++.+ .+.++.++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~--~vvl~~R~~~~~~~~~~l~~~l~~------------------~g~~v~~~~ 298 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA--HLVLTSRRGADAPGAAELRAELEQ------------------LGVRVTIAA 298 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHH------------------TTCEEEEEE
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc--EEEEEeCCCCChHHHHHHHHHHHh------------------cCCeEEEEE
Confidence 389999999999999999999999952 567788875433333333332210 246889999
Q ss_pred ccCCCCCCCCCchhhHHHHhc------CccEEEEccccc-Cc-------cccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 015874 92 GDISSEDLGLKDSNLKEELWN------ELDIMVNSAAIT-KF-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~-~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~ 157 (399)
+|+++ .+.+..+++ .+|+|||+||.. .. .+.++..++.|+.++.++.+++... ...+|
T Consensus 299 ~Dvtd-------~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~i 370 (496)
T 3mje_A 299 CDAAD-------REALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAF 370 (496)
T ss_dssp CCTTC-------HHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEE
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEE
Confidence 99995 444444443 489999999986 22 2457788999999999999999885 77899
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||+..+... .....|+.+|..
T Consensus 371 V~~SS~a~~~g~--------------------------------------------------------~g~~~YaAaKa~ 394 (496)
T 3mje_A 371 VLFSSGAAVWGS--------------------------------------------------------GGQPGYAAANAY 394 (496)
T ss_dssp EEEEEHHHHTTC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEEeChHhcCCC--------------------------------------------------------CCcHHHHHHHHH
Confidence 999997543211 113579999999
Q ss_pred HHHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 238 GEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 238 ~E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
.+.+.++. ..|++++++.||.+.+..... .. .....+.. ..+..+..++.+.++..++
T Consensus 395 ldala~~~~~~Gi~v~sV~pG~w~~~gm~~------~~----~~~~~l~~-----------~g~~~l~pe~~~~~l~~~l 453 (496)
T 3mje_A 395 LDALAEHRRSLGLTASSVAWGTWGEVGMAT------DP----EVHDRLVR-----------QGVLAMEPEHALGALDQML 453 (496)
T ss_dssp HHHHHHHHHHTTCCCEEEEECEESSSCC----------------CHHHHH-----------TTEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEECCcccCCcccc------Ch----HHHHHHHh-----------cCCCCCCHHHHHHHHHHHH
Confidence 99998877 779999999999887644311 00 00001100 1123467789999999988
Q ss_pred Hh
Q 015874 317 VA 318 (399)
Q Consensus 317 ~~ 318 (399)
..
T Consensus 454 ~~ 455 (496)
T 3mje_A 454 EN 455 (496)
T ss_dssp HH
T ss_pred cC
Confidence 74
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=152.44 Aligned_cols=217 Identities=13% Similarity=0.101 Sum_probs=128.0
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
...+.||+|+||||+|+||+++++.|+++| .+|.+..|... .....+...+++ ...
T Consensus 14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i---------~~~------ 75 (613)
T 3oml_A 14 KLRYDGRVAVVTGAGAGLGREYALLFAERG---AKVVVNDLGGTHSGDGASQRAADIVVDEI---------RKA------ 75 (613)
T ss_dssp -CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEC--------------CHHHHHHHH---------HHT------
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcccccccCCHHHHHHHHHHH---------HHh------
Confidence 345789999999999999999999999999 55677766211 111122222211 000
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-- 151 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-- 151 (399)
... ..+|+++.+......+...+.+.++|++||+||.... .+.++..+++|+.++.++++++...
T Consensus 76 ---~~~---~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~ 149 (613)
T 3oml_A 76 ---GGE---AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMK 149 (613)
T ss_dssp ---TCC---EEECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCe---EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2368886432111111111223468999999997632 2567888999999999999988542
Q ss_pred -cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 152 -~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
++..+||++||.+.+... .....
T Consensus 150 ~~~~g~IV~isS~a~~~~~--------------------------------------------------------~~~~~ 173 (613)
T 3oml_A 150 KQNYGRIIMTSSNSGIYGN--------------------------------------------------------FGQVN 173 (613)
T ss_dssp TTTCEEEEEECCHHHHHCC--------------------------------------------------------TTCHH
T ss_pred HcCCCEEEEECCHHHcCCC--------------------------------------------------------CCChH
Confidence 245789999997543211 12357
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.||.+.+.+.+.+ ..|+++..+.||.+..... .... ......+..
T Consensus 174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~~~------------------------~~~~~~~~p 225 (613)
T 3oml_A 174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GILP------------------------DILFNELKP 225 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CCCC------------------------HHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hccc------------------------hhhhhcCCH
Confidence 999999999998766 4589999999986422111 0000 011223467
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~ 333 (399)
+|+|.+++.++... ..-.+.++++.+
T Consensus 226 edvA~~v~~L~s~~--~~~tG~~i~vdG 251 (613)
T 3oml_A 226 KLIAPVVAYLCHES--CEDNGSYIESAA 251 (613)
T ss_dssp GGTHHHHHHTTSTT--CCCCSCEEEEET
T ss_pred HHHHHHHHHhcCCC--cCCCceEEEECC
Confidence 89999999888643 212266777654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=142.65 Aligned_cols=226 Identities=13% Similarity=0.075 Sum_probs=148.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE-EecCCc----------ccHHHHHHHHHhhhhhHHHHHhhhc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF-VRAADI----------DSAALRFQNEVLAKDVFNVLKEKWG 76 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~-~R~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~ 76 (399)
.+.+++++|||||+|+||.++++.|+++|.++ |.+. .|+... ....+...+++ ..
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~--vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l---------~~--- 312 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGH--LLLHTTPSGSEGAEGTSGAAEDSGLAGLVAEL---------AD--- 312 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCE--EEEEECCCC---------------CHHHHHHH---------HH---
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCE--EEEEeCCCCCCccccccccccCHHHHHHHHHH---------Hh---
Confidence 35678999999999999999999999999542 4555 676422 11122222211 11
Q ss_pred ccccccccCceEEEeccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCc-------cccHHHHHHHhHHHHHH
Q 015874 77 TRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIH 143 (399)
Q Consensus 77 ~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ 143 (399)
.+.++.++.+|+++ .+.+..+++ .+|+|||+||.... .+.++..++.|+.|+.+
T Consensus 313 ------~g~~v~~~~~Dvtd-------~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~ 379 (525)
T 3qp9_A 313 ------LGATATVVTCDLTD-------AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALH 379 (525)
T ss_dssp ------HTCEEEEEECCTTS-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------cCCEEEEEECCCCC-------HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHH
Confidence 14689999999995 444444443 47999999997642 25677889999999999
Q ss_pred HHHHHHhcc---C-CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccc
Q 015874 144 LVNFAKKCV---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (399)
Q Consensus 144 ll~~a~~~~---~-~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (399)
+.+++.... + ..+||++||++.+...
T Consensus 380 L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-------------------------------------------------- 409 (525)
T 3qp9_A 380 LDRLLREAAAAGGRPPVLVLFSSVAAIWGG-------------------------------------------------- 409 (525)
T ss_dssp HHHHHHHTC----CCCEEEEEEEGGGTTCC--------------------------------------------------
T ss_pred HHHHhccccccCCCCCEEEEECCHHHcCCC--------------------------------------------------
Confidence 999998752 1 6789999997543321
Q ss_pred cccccCCCCchhhHhHHHHHHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCcc
Q 015874 220 ERAKLHGWPNTYVFTKTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKV 298 (399)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
.....|+.+|...+.+..+. ..|++++++.||.+ ... +... .. ....... .
T Consensus 410 ------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tg------m~~~-~~---~~~~~~~-----------~ 461 (525)
T 3qp9_A 410 ------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGS------RVTE-GA---TGERLRR-----------L 461 (525)
T ss_dssp ------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTS------GGGS-SH---HHHHHHH-----------T
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccc------cccc-hh---hHHHHHh-----------c
Confidence 11357999999999987766 67999999999998 211 1111 00 0111100 1
Q ss_pred ccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHH
Q 015874 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (399)
Q Consensus 299 ~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~ 349 (399)
....+..+++++++..++..... .-+... +.|..+...+.
T Consensus 462 g~~~l~pee~a~~l~~~l~~~~~-------~v~v~~----~dw~~~~~~~~ 501 (525)
T 3qp9_A 462 GLRPLAPATALTALDTALGHGDT-------AVTIAD----VDWSSFAPGFT 501 (525)
T ss_dssp TBCCBCHHHHHHHHHHHHHHTCS-------EEEECC----BCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhCCCC-------eEEEEe----CCHHHHHhhcc
Confidence 12457789999999999975322 223333 45766655443
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-14 Score=141.86 Aligned_cols=176 Identities=13% Similarity=0.032 Sum_probs=113.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCC----CcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~----~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.|+|+||||+||||++++..|++.|+ .+..|.++.+..... .......++ ....+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~-~~~g~~~dl--------------------~~~~~ 62 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMK-ALEGVVMEL--------------------EDCAF 62 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHH--------------------HTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchh-hccchhhhh--------------------hcccc
Confidence 46899999999999999999999874 112567776543110 111111111 00111
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEecce-
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVSTAY- 164 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~-~~v~~SS~~- 164 (399)
.++ +|+.+ .+.....++++|+|||+||.... ......+++.|+.++.++++++++..+.+ +++++|+..
T Consensus 63 ~~~-~di~~-------~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 63 PLL-AGLEA-------TDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TTE-EEEEE-------ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred ccc-CCeEe-------ccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 222 56652 22233567899999999998753 35567889999999999999999862143 666666432
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
+.. .+.++.. ....+.+.|+.+|..+|++...
T Consensus 135 ~~~----~~~~~~~--------------------------------------------~~~~p~~~yg~tkl~~er~~~~ 166 (327)
T 1y7t_A 135 TNA----LIAYKNA--------------------------------------------PGLNPRNFTAMTRLDHNRAKAQ 166 (327)
T ss_dssp HHH----HHHHHTC--------------------------------------------TTSCGGGEEECCHHHHHHHHHH
T ss_pred hhH----HHHHHHc--------------------------------------------CCCChhheeccchHHHHHHHHH
Confidence 000 0000000 0012345699999999998876
Q ss_pred h--hCCCcEEEEecCceecCCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~ 264 (399)
+ ..+++.+++|+++|||++.
T Consensus 167 ~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 167 LAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp HHHHHTCCGGGEECCEEEBCSS
T ss_pred HHHHhCcChhheeeeEEEcCCC
Confidence 6 4589999999999999876
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.8e-13 Score=129.85 Aligned_cols=244 Identities=14% Similarity=0.045 Sum_probs=138.6
Q ss_pred cCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.||+|+|||| +|+||.++++.|+++| .+|.+..|+... .+..+.. ....++.+. +... ......+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~----~~~~~~~-~~~~~~~~~-~~~~---~~~~~~~ 74 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAG---ARVALGTWPPVL----GLFQKSL-QSGRLDEDR-KLPD---GSLIEFA 74 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTT---CEEEEEECHHHH----HHHHHHH-HHTTTHHHH-BCTT---SCBCCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCC---CEEEEEeccccc----chhhhhh-hhhhhhhhh-hhhc---ccccccc
Confidence 78899999999 8999999999999999 556777775310 0000000 000011110 0000 0000012
Q ss_pred EEEeccC------------CC--------CCCCCCchhhHH---HHhcCccEEEEcccccC-----c----cccHHHHHH
Q 015874 88 TFVPGDI------------SS--------EDLGLKDSNLKE---ELWNELDIMVNSAAITK-----F----DERYDVAFG 135 (399)
Q Consensus 88 ~~~~gDl------------~~--------~~~~~~~~~~~~---~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~ 135 (399)
.++.+|+ ++ ++. ...... +.+.++|++||+||... + .+.++..++
T Consensus 75 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~---v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~ 151 (315)
T 2o2s_A 75 GVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYT---IKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASS 151 (315)
T ss_dssp CEEECCTTCSSTTSSCHHHHTCGGGSSCCCCS---HHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCCHHH---HHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHh
Confidence 3333332 21 111 122222 22357999999998542 1 245778899
Q ss_pred HhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHH
Q 015874 136 INTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (399)
Q Consensus 136 ~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (399)
+|+.++.++++++.+. .+..+||++||...+....
T Consensus 152 ~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-------------------------------------------- 187 (315)
T 2o2s_A 152 NSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP-------------------------------------------- 187 (315)
T ss_dssp HHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT--------------------------------------------
T ss_pred hhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCC--------------------------------------------
Confidence 9999999999998763 2236899999986433111
Q ss_pred hhccccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCc
Q 015874 215 KNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGN 288 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (399)
.....|+.+|...+.+.+.. . .|++++.++||.|..+........... .....+......
T Consensus 188 -----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~-- 253 (315)
T 2o2s_A 188 -----------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK-SFIDYAIDYSYN-- 253 (315)
T ss_dssp -----------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS-CHHHHHHHHHHH--
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc-hhHHHHHHHHhc--
Confidence 11136999999999888765 2 689999999999876421100000000 000011111100
Q ss_pred cccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 289 LRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 289 ~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..+ ...+...+|+|++++.++..... .-.+..+.+.++
T Consensus 254 --~~p-----~~r~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 291 (315)
T 2o2s_A 254 --NAP-----LRRDLHSDDVGGAALFLLSPLAR-AVSGVTLYVDNG 291 (315)
T ss_dssp --HSS-----SCCCCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred --cCC-----CCCCCCHHHHHHHHHHHhCchhc-cCcCCEEEECCC
Confidence 000 12346789999999988863222 223778888876
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-13 Score=129.97 Aligned_cols=249 Identities=12% Similarity=0.033 Sum_probs=122.6
Q ss_pred cCCcEEEEecC--cchhHHHHHHHHHHhCCCcCeEEEEEecC-----------CcccHHHHHHHHHhhhhhHHHHHhhhc
Q 015874 10 LENKTILVSGV--TGFVAKVFIEKILRVQPNVKKLYLFVRAA-----------DIDSAALRFQNEVLAKDVFNVLKEKWG 76 (399)
Q Consensus 10 ~~~~~IlVTGa--tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~ 76 (399)
+.+|+++|||| +|+||.++++.|+++| .+|.+..|+. +.......+. . ...+.+.++..
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~ 78 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAG---ARVLVGTWPPVYSIFKKGLESSRFEQDSFYA----Q-EPSSKVAAEAA 78 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEEEeccccccchhhhhhhhhhhhhhhhh----c-chhhhHHHHhh
Confidence 67899999999 8999999999999999 5567777642 1110000000 0 00000001100
Q ss_pred ccccccccCceEEEeccC--CCCCCC---------------CCchhhHH---HHhcCccEEEEcccccC-----c----c
Q 015874 77 TRLNSFISEKITFVPGDI--SSEDLG---------------LKDSNLKE---ELWNELDIMVNSAAITK-----F----D 127 (399)
Q Consensus 77 ~~~~~~~~~~i~~~~gDl--~~~~~~---------------~~~~~~~~---~~~~~~D~Vih~Aa~~~-----~----~ 127 (399)
... .......++.+|+ ++++.. ........ +.+.++|++||+||... + .
T Consensus 79 ~~~--~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 79 EKP--VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred hcc--ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 000 0000123343332 221100 00122222 22357999999998541 1 2
Q ss_pred ccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCC
Q 015874 128 ERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (399)
Q Consensus 128 ~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (399)
+.++..+++|+.++.++++++.+. .+..+||++||...+....
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------------------------------------ 200 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP------------------------------------ 200 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC------------------------------------
Confidence 457788999999999999998764 2236899999986443211
Q ss_pred hhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCCCCCCCCcccCcchHHHH
Q 015874 207 QKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTL 280 (399)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~ 280 (399)
.....|+.+|...+.+.+.. . .|++++.++||.|.++...... .. ....+
T Consensus 201 -------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~---~~--~~~~~ 256 (319)
T 2ptg_A 201 -------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIG---KA--GDKTF 256 (319)
T ss_dssp -------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--------------------
T ss_pred -------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcc---cc--cchhh
Confidence 11136999999999888765 2 5899999999999775431100 00 00000
Q ss_pred HHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 281 FVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...... .+ ........+...+|+|++++.++..... .-.+..+.+.++
T Consensus 257 ~~~~~~----~~-~~~~p~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 304 (319)
T 2ptg_A 257 IDLAID----YS-EANAPLQKELESDDVGRAALFLLSPLAR-AVTGATLYVDNG 304 (319)
T ss_dssp ---------------------CCCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHH----HH-hccCCCCCCCCHHHHHHHHHHHhCcccC-CccCCEEEECCC
Confidence 000000 00 0000112356789999999998863222 223788888887
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.48 E-value=7.3e-13 Score=128.79 Aligned_cols=185 Identities=10% Similarity=0.049 Sum_probs=118.1
Q ss_pred CCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 11 ENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 11 ~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
++|+++||||++ .||.+++++|+++| .+|.+.+|+.... ...|-.+.+ ....... .........+.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G---~~Vv~~~~~~~~~-l~~r~~~~~------~~~~~~~--~~~~~~~~~~~ 68 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYN-IFMKNYKNG------KFDNDMI--IDKDKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECHHHHH-HHHHHHHTT------TTTGGGB--CSSSCBCCEEE
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecCcccc-ccccchHHH------HHHHHHH--Hhhcccccccc
Confidence 478999999875 99999999999999 5567666653110 000000000 0000000 00011123477
Q ss_pred EEeccCCCC--C------------------CCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhHH
Q 015874 89 FVPGDISSE--D------------------LGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTL 139 (399)
Q Consensus 89 ~~~gDl~~~--~------------------~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~ 139 (399)
++.+|+++. + ......+...+.+.++|++||+||... + .+.++..+++|+.
T Consensus 69 ~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~ 148 (329)
T 3lt0_A 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhH
Confidence 888999876 3 111111122223357999999999631 1 2567888999999
Q ss_pred HHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc
Q 015874 140 GVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (399)
Q Consensus 140 ~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (399)
++..+++++.+. ....++|++||...+...
T Consensus 149 g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------------------------------------------------- 179 (329)
T 3lt0_A 149 SLISLCKYFVNIMKPQSSIISLTYHASQKVV------------------------------------------------- 179 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCC-------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeCccccCCC-------------------------------------------------
Confidence 999999998774 222689999998643321
Q ss_pred ccccccCCCCc-hhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCC
Q 015874 219 TERAKLHGWPN-TYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 219 ~~~~~~~~~~~-~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~ 263 (399)
.... .|+.||.+.+.+.+.. . .++++..+.||.|-.+.
T Consensus 180 -------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~ 224 (329)
T 3lt0_A 180 -------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224 (329)
T ss_dssp -------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence 1122 7999999999888765 4 59999999999987643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.33 E-value=8.2e-12 Score=131.09 Aligned_cols=231 Identities=13% Similarity=0.115 Sum_probs=147.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.+.||+++||||++.||.++++.|+++|+ +|.+..|+.. ....+.+.+ .+.++.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~-~~~~~~i~~----------------------~g~~~~ 372 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGA---KVVVNDFKDA-TKTVDEIKA----------------------AGGEAW 372 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC-HHHHHHHHH----------------------TTCEEE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCC---EEEEEeCccH-HHHHHHHHh----------------------cCCeEE
Confidence 46789999999999999999999999994 4566555321 111111111 124566
Q ss_pred EEeccC-CCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDI-SSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl-~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.+.+|+ .+.+. ..+...+.+.++|++||+||.... .+.++..+++|+.|+..+.+++.+. ++..++
T Consensus 373 ~~~~Dv~~~~~~---~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 449 (604)
T 2et6_A 373 PDQHDVAKDSEA---IIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRI 449 (604)
T ss_dssp EECCCHHHHHHH---HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEcChHHHHHH---HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 778888 43110 112222335679999999997532 2568889999999999999887653 244689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||.+..... .....|+.||..
T Consensus 450 VnisS~ag~~~~--------------------------------------------------------~~~~~Y~asKaa 473 (604)
T 2et6_A 450 INITSTSGIYGN--------------------------------------------------------FGQANYSSSKAG 473 (604)
T ss_dssp EEECCHHHHSCC--------------------------------------------------------TTBHHHHHHHHH
T ss_pred EEECChhhccCC--------------------------------------------------------CCChhHHHHHHH
Confidence 999997532211 112479999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
...+.+.. ..|+++..+.||. -.+. ... ... .. ..+....+|+|.++
T Consensus 474 l~~lt~~la~El~~~gIrVn~v~PG~-~T~m-------~~~------~~~----~~----------~~~~~~pe~vA~~v 525 (604)
T 2et6_A 474 ILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-------TLS------IMR----EQ----------DKNLYHADQVAPLL 525 (604)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------------------------CCSSCGGGTHHHH
T ss_pred HHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-------ccc------cCc----hh----------hccCCCHHHHHHHH
Confidence 99888765 5689999999983 2111 010 000 00 01234668999999
Q ss_pred HHHHHhccCCCCCCcEEEecCCC---------------CCcccHHHHHHHHHHhhcc
Q 015874 313 IVAMVAHAKQPSDANIYHVGSSL---------------RNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~~---------------~~~~s~~el~~~l~~~~~~ 354 (399)
+.++..... -.+.++.+.++. ....+..++.+.+.+....
T Consensus 526 ~~L~s~~~~--itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 526 VYLGTDDVP--VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp HHTTSTTCC--CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred HHHhCCccC--CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 887753322 236777766541 1236788888888877654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.7e-11 Score=118.18 Aligned_cols=180 Identities=8% Similarity=-0.072 Sum_probs=117.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSA---------ALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
..+|++|||||++.||.++++.|++ +| .+|.+..|+...... ...+.+.+ ..
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G---A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~----------~~----- 106 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCG---ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFA----------AQ----- 106 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHH----------HH-----
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcC---CEEEEEeCCchhhhhhcccccchhHHHHHHHH----------Hh-----
Confidence 3478999999999999999999999 99 556777776554321 01111110 00
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc----------------C------------------
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT----------------K------------------ 125 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~----------------~------------------ 125 (399)
.+.++..+.+|+++++......+...+.+.++|++||+||.. .
T Consensus 107 ---~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~ 183 (405)
T 3zu3_A 107 ---KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIK 183 (405)
T ss_dssp ---TTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred ---cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccc
Confidence 135678899999975432222222223446799999999863 0
Q ss_pred -------ccccHHHHHHHhHHHHH-HHHHHHHh--c-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHH
Q 015874 126 -------FDERYDVAFGINTLGVI-HLVNFAKK--C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194 (399)
Q Consensus 126 -------~~~~~~~~~~~n~~~~~-~ll~~a~~--~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 194 (399)
-.+.++..+++|..+.. .+++++.. + .+..++|.+||++......
T Consensus 184 ~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p------------------------ 239 (405)
T 3zu3_A 184 ESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD------------------------ 239 (405)
T ss_dssp EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT------------------------
T ss_pred cccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC------------------------
Confidence 01456777788877766 55555432 1 1225799999875322110
Q ss_pred HHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----hC-CCcEEEEecCceecCCC
Q 015874 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KE-NLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~-~~~~~i~Rp~~V~G~~~ 264 (399)
..+...|+.+|...+.+.+.. .. |+++..+-||.|-.+..
T Consensus 240 ------------------------------~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s 285 (405)
T 3zu3_A 240 ------------------------------IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS 285 (405)
T ss_dssp ------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred ------------------------------CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence 112267999999999988766 56 89999999999877543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.4e-11 Score=125.51 Aligned_cols=234 Identities=13% Similarity=0.104 Sum_probs=143.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD------IDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
+.||+++||||++.||.++++.|+++| .+|.+..|... ....++...+++ ...
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i---------~~~--------- 64 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLG---AKVVVNDLGGALNGQGGNSKAADVVVDEI---------VKN--------- 64 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECC-----------CHHHHHHHHH---------HHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCccccccccchHHHHHHHHHH---------Hhc---------
Confidence 678999999999999999999999999 45566655431 011222222222 000
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
+.++ ..|+++.+......+...+.+.++|++||+||.... .+.++..+++|+.|+..+.+++.+. ++
T Consensus 65 g~~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~ 141 (604)
T 2et6_A 65 GGVA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK 141 (604)
T ss_dssp TCEE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 1122 246665432111122222345689999999997532 2568889999999999999887653 24
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||....... .....|+.
T Consensus 142 ~G~IVnisS~ag~~~~--------------------------------------------------------~~~~~Y~a 165 (604)
T 2et6_A 142 YGRIVNTSSPAGLYGN--------------------------------------------------------FGQANYAS 165 (604)
T ss_dssp CEEEEEECCHHHHHCC--------------------------------------------------------TTBHHHHH
T ss_pred CCEEEEECCHHHcCCC--------------------------------------------------------CCchHHHH
Confidence 4689999997532211 11247999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
||.....+.+.. ..|+++..+.|+. .. + + .... ... ........+|+
T Consensus 166 sKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T----~---m----------~~~~---~~~-------~~~~~~~pe~v 217 (604)
T 2et6_A 166 AKSALLGFAETLAKEGAKYNIKANAIAPLA-RS----R---M----------TESI---MPP-------PMLEKLGPEKV 217 (604)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CC----H---H----------HHTT---SCH-------HHHTTCSHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEccCC-cC----c---c----------cccc---CCh-------hhhccCCHHHH
Confidence 999999888765 5689999999962 11 0 0 0000 000 01122467899
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCCC----------------CCcccHHHHHHHHHHhhc
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSSL----------------RNPVTLVSILDYGFVYFT 353 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~~----------------~~~~s~~el~~~l~~~~~ 353 (399)
|.+++.++... ..-.+.++.+.++. ....+..++.+.+.+..+
T Consensus 218 A~~v~~L~s~~--~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 276 (604)
T 2et6_A 218 APLVLYLSSAE--NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD 276 (604)
T ss_dssp HHHHHHHTSSS--CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCc--ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence 99999888633 22236677665431 123567888877776643
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.24 E-value=4e-11 Score=129.55 Aligned_cols=166 Identities=17% Similarity=0.184 Sum_probs=122.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHH-HhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll-~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
-.+++++||||+|.||.++++.|+ ++|.+ .|.+.+|+.......+...+++.+ .+.++.
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~------------------~G~~v~ 587 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVR--NLVLVSRRGPAASGAAELVAQLTA------------------YGAEVS 587 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCC--EEEEEESSGGGSTTHHHHHHHHHH------------------TTCEEE
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCc--EEEEeccCccchHHHHHHHHHHHh------------------cCCcEE
Confidence 467899999999999999999999 78842 478888885443333333322210 146789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~ 155 (399)
++.+|+++ .+.+..+++ .+|+|||+|+.... .+.++..++.|+.|+.++.+++.. ..
T Consensus 588 ~~~~Dvsd-------~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l- 657 (795)
T 3slk_A 588 LQACDVAD-------RETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV- 657 (795)
T ss_dssp EEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-
T ss_pred EEEeecCC-------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-
Confidence 99999995 343434332 47999999997642 256788899999999999998843 34
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
.||++||++..-.. .....|+.+|
T Consensus 658 ~iV~~SS~ag~~g~--------------------------------------------------------~g~~~YaAak 681 (795)
T 3slk_A 658 ALVLFSSVSGVLGS--------------------------------------------------------GGQGNYAAAN 681 (795)
T ss_dssp EEEEEEETHHHHTC--------------------------------------------------------SSCHHHHHHH
T ss_pred EEEEEccHHhcCCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999987543321 1135799999
Q ss_pred HHHHHHHHHh-hCCCcEEEEecCceec
Q 015874 236 TMGEMLMQQS-KENLSLVIIRPTVVSG 261 (399)
Q Consensus 236 ~~~E~~l~~~-~~~~~~~i~Rp~~V~G 261 (399)
...+.+.++. ..|++++.+.||.+-+
T Consensus 682 a~~~alA~~~~~~Gi~v~sI~pG~v~t 708 (795)
T 3slk_A 682 SFLDALAQQRQSRGLPTRSLAWGPWAE 708 (795)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCeEEEEECCeECc
Confidence 9998888877 7899999999998765
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.3e-11 Score=120.20 Aligned_cols=179 Identities=11% Similarity=-0.046 Sum_probs=116.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHH-hCCCcCeEEEEEecCCcccHH---------HHHHHHHhhhhhHHHHHhhhccccc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILR-VQPNVKKLYLFVRAADIDSAA---------LRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~-~g~~V~~v~~~~R~~~~~~~~---------~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
.+|++|||||++.||.++++.|++ +| .+|.+..|+....... ..+.+.+ ..
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~G---A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~----------~~------ 120 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFG---ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHA----------KA------ 120 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHH----------HH------
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCC---CEEEEEeCCchhhhhhhcccccchhHHHHHHH----------Hh------
Confidence 478999999999999999999999 99 5567777876543210 0111110 00
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHh-cCccEEEEccccc----------------Cc-----------------
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAIT----------------KF----------------- 126 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~----------------~~----------------- 126 (399)
.+.++..+.+|+++++......+...+.+ .++|++||+||.. ..
T Consensus 121 --~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~ 198 (422)
T 3s8m_A 121 --AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTII 198 (422)
T ss_dssp --TTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred --cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcccccccccccccccccccccccccccccccccccccc
Confidence 13567889999997553222233333445 6799999999862 00
Q ss_pred --------cccHHHHHHHhHHHHH-HHHHHHHhc---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHH
Q 015874 127 --------DERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194 (399)
Q Consensus 127 --------~~~~~~~~~~n~~~~~-~ll~~a~~~---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 194 (399)
.+.++..+.+|..+.. .+++++... .+..++|.+||++......
T Consensus 199 ~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p------------------------ 254 (422)
T 3s8m_A 199 QASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP------------------------ 254 (422)
T ss_dssp EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH------------------------
T ss_pred ccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC------------------------
Confidence 1345556666665554 555555431 1235789999875322100
Q ss_pred HHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCC
Q 015874 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
..+...|+.||...+.+.+.. ..|+++..+.||.|-.+..
T Consensus 255 ------------------------------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 255 ------------------------------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp ------------------------------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred ------------------------------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 011256999999999988765 5689999999999987654
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1e-10 Score=117.09 Aligned_cols=180 Identities=9% Similarity=-0.098 Sum_probs=113.8
Q ss_pred cCCcEEEEecCcchhHHH--HHHHHHHhCCCcCeEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhccc
Q 015874 10 LENKTILVSGVTGFVAKV--FIEKILRVQPNVKKLYLFVRAADIDSA---------ALRFQNEVLAKDVFNVLKEKWGTR 78 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~--l~~~Ll~~g~~V~~v~~~~R~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~ 78 (399)
..||+||||||++.||.+ +++.|.++| .+|.+..|+...... .+.+.+. ...
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~G---a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~----------~~~---- 120 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPE---AHTIGVSYETGATDRRIGTAGWYNNIFFKEF----------AKK---- 120 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSC---CEEEEEECCCCCCSSCCCCHHHHHHHHHHHH----------HHH----
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCC---CEEEEEecCcchhhhcccccccchHHHHHHH----------HHH----
Confidence 568999999999999999 999998889 566888887544210 1121111 111
Q ss_pred ccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc-------------C--------------------
Q 015874 79 LNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT-------------K-------------------- 125 (399)
Q Consensus 79 ~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~-------------~-------------------- 125 (399)
.+.++.++.+|+++++......+...+.+.++|++||+||.. .
T Consensus 121 ----~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~ 196 (418)
T 4eue_A 121 ----KGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEI 196 (418)
T ss_dssp ----TTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEE
T ss_pred ----cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccc
Confidence 135688999999975431111222222234699999999863 0
Q ss_pred --------ccccHHHHHHHhHHHHH-HHHHHHHhc---cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHH
Q 015874 126 --------FDERYDVAFGINTLGVI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193 (399)
Q Consensus 126 --------~~~~~~~~~~~n~~~~~-~ll~~a~~~---~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 193 (399)
..+.++..+.+|..+.. .+++++... .+..++|.+||++.....
T Consensus 197 ~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------------------ 252 (418)
T 4eue_A 197 TLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------------------------ 252 (418)
T ss_dssp EEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------------------------
T ss_pred ccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------------------------
Confidence 01234455555655444 445554432 123478888887532210
Q ss_pred HHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecCCC
Q 015874 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~~~ 264 (399)
+..+...|+.+|...+.+.+.. . .|+++.++.||.|-.+..
T Consensus 253 ------------------------------p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s 299 (418)
T 4eue_A 253 ------------------------------KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKAS 299 (418)
T ss_dssp ------------------------------TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred ------------------------------CccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhh
Confidence 0112267999999999888766 5 689999999999877543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.9e-11 Score=134.39 Aligned_cols=171 Identities=16% Similarity=0.121 Sum_probs=113.4
Q ss_pred cCCcEEEEecCcch-hHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~-IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.|++||||||+|+ ||.++++.|+++| .+|.+..|+... ..+...++ +..+.+. .+.++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~G---A~VVl~~~R~~~--~l~~~a~e---------L~~el~~-----~G~~v~ 710 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGG---AKVIVTTSRFSR--QVTEYYQG---------IYARCGA-----RGSQLV 710 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESSCCH--HHHHHHHH---------HHHHHCC-----TTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCChH--HHHHHHHH---------HHHHhhc-----cCCeEE
Confidence 67899999999999 9999999999999 456776544321 11111111 1111111 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHH------hc-CccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHh-
Q 015874 89 FVPGDISSEDLGLKDSNLKEEL------WN-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKK- 150 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~------~~-~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~- 150 (399)
++.+|+++++. .......+ +. ++|+|||+||.... .+.++..+++|+.++.+++++++.
T Consensus 711 ~v~~DVsd~es---V~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~l 787 (1878)
T 2uv9_A 711 VVPFNQGSKQD---VEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKE 787 (1878)
T ss_dssp EEECCTTCHHH---HHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCHHH---HHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999996432 11222222 22 58999999997532 245678899999999999877432
Q ss_pred --cc--CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 151 --CV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 151 --~~--~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
+. +..+||++||......
T Consensus 788 p~M~~~~~G~IVnISS~ag~~g---------------------------------------------------------- 809 (1878)
T 2uv9_A 788 RGYETRPAQVILPLSPNHGTFG---------------------------------------------------------- 809 (1878)
T ss_dssp HTCCSCCEEECCEECSCSSSSS----------------------------------------------------------
T ss_pred HHHHhCCCCEEEEEcchhhccC----------------------------------------------------------
Confidence 21 2358999999743221
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCcee
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVS 260 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~ 260 (399)
....|+.+|...+.++... ...++++.+.||.|-
T Consensus 810 g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 810 NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1246999999999887643 223899999999886
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.4e-10 Score=129.46 Aligned_cols=171 Identities=18% Similarity=0.150 Sum_probs=114.7
Q ss_pred cCCcEEEEecCcch-hHHHHHHHHHHhCCCcCeEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFV-RAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~-IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.||+||||||+|+ ||.++++.|+++| .+|++.. |+.... +...++ +..+.+. .+.++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~G---A~Vvl~~~R~~~~l---~~~~~e---------L~~~~~~-----~g~~v 732 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQV---TDYYQS---------IYAKYGA-----KGSTL 732 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTT---CEEEEEESSCCHHH---HHHHHH---------HHHHHCC-----TTCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCHHHH---HHHHHH---------HHHHhhc-----CCCeE
Confidence 67899999999998 9999999999999 4556664 443322 111111 1111111 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHH--------hc-CccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHH
Q 015874 88 TFVPGDISSEDLGLKDSNLKEEL--------WN-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFA 148 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~--------~~-~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a 148 (399)
.++.+|+++++. .......+ +. ++|++||+||.... .+.++..+++|+.++..+++++
T Consensus 733 ~~v~~DVsd~~s---V~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~ 809 (1887)
T 2uv8_A 733 IVVPFNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQ 809 (1887)
T ss_dssp EEEECCTTCHHH---HHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHH---HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 899999996442 11222122 22 69999999997532 2446788999999999999987
Q ss_pred Hhcc-----CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccc
Q 015874 149 KKCV-----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (399)
Q Consensus 149 ~~~~-----~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (399)
+..+ +..+||++||......
T Consensus 810 ~~lp~m~~~~~G~IVnISS~ag~~g------------------------------------------------------- 834 (1887)
T 2uv8_A 810 KSARGIETRPAQVILPMSPNHGTFG------------------------------------------------------- 834 (1887)
T ss_dssp HHTTTCCSCCEEEEEEECSCTTCSS-------------------------------------------------------
T ss_pred HhhhhhhhCCCCEEEEEcChHhccC-------------------------------------------------------
Confidence 4321 1258999999743221
Q ss_pred cCCCCchhhHhHHHHHHH-HHHh----hCCCcEEEEecCceec
Q 015874 224 LHGWPNTYVFTKTMGEML-MQQS----KENLSLVIIRPTVVSG 261 (399)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~-l~~~----~~~~~~~i~Rp~~V~G 261 (399)
....|+.||...+.+ .+.. ...++++.+.||.|-+
T Consensus 835 ---g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 ---GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp ---CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 124699999999998 3333 2238999999999984
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-11 Score=134.82 Aligned_cols=170 Identities=18% Similarity=0.139 Sum_probs=114.0
Q ss_pred cCCcEEEEecCcch-hHHHHHHHHHHhCCCcCeEEEEE-ecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFV-RAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 10 ~~~~~IlVTGatG~-IG~~l~~~Ll~~g~~V~~v~~~~-R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+.||+||||||+|+ ||.++++.|+++| .+|.+.. |+...... .+.+. .+.+ ..+.+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~G---A~VVL~~~R~~e~lee~a~eL~-------------ael~-----a~Ga~ 532 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVTDYYQSIY-------------AKYG-----AKGST 532 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHT---CEEEEEESSCSTTTTTHHHHTT-------------TTTC-----CTTCE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCc---CEEEEEeCCCHHHHHHHHHHHH-------------HHhh-----cCCCe
Confidence 67899999999998 9999999999999 4556663 55443321 11111 1100 01357
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH--------hc-CccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHH
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEEL--------WN-ELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNF 147 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~--------~~-~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~ 147 (399)
+.++.+|+++++. ..+....+ +. ++|+|||+||.... .+.++..+++|+.++..++++
T Consensus 533 V~vV~~DVTD~es---VeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqa 609 (1688)
T 2pff_A 533 LIVVPFNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK 609 (1688)
T ss_dssp EEEEECCSSSTTH---HHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHH---HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999997653 12222222 22 58999999997522 234677899999999999998
Q ss_pred HHhc---c--CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccccc
Q 015874 148 AKKC---V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (399)
Q Consensus 148 a~~~---~--~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
++.. . +..+||++||......
T Consensus 610 a~~lp~M~krggGrIVnISSiAG~~G------------------------------------------------------ 635 (1688)
T 2pff_A 610 QKSARGIETRPAQVILPMSPNHGTFG------------------------------------------------------ 635 (1688)
T ss_dssp HHHHHTCTTSCEEECCCCCSCTTTSS------------------------------------------------------
T ss_pred HHhChHHHhCCCCEEEEEEChHhccC------------------------------------------------------
Confidence 7332 1 1257899998643211
Q ss_pred ccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceec
Q 015874 223 KLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (399)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G 261 (399)
....|+.||+..+.++... ...++++.+.||.|-|
T Consensus 636 ----g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 636 ----GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp ----CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 1246999999999984433 2238888999998874
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=130.71 Aligned_cols=176 Identities=14% Similarity=0.089 Sum_probs=118.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
-.+++++||||+|.||.++++.|+++|.+ .|.+..|+..+........+++ .. .+.++.+
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l---------~~---------~g~~v~~ 1941 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQ--KLVLTSRSGIRTGYQARQVREW---------RR---------QGVQVLV 1941 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCSHHHHHHHHHH---------HH---------TTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCC--EEEEEeCCCcchHHHHHHHHHH---------Hh---------CCCEEEE
Confidence 46899999999999999999999999953 2677778765543222222211 00 1357888
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.+|+++.+......+... .+..+|+|||+||.... .+.++..++.|+.|+.++.+++... ....+||++|
T Consensus 1942 ~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iS 2020 (2512)
T 2vz8_A 1942 STSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFS 2020 (2512)
T ss_dssp ECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred EecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEec
Confidence 9999996543111111111 13479999999997532 2567777899999999998887653 3457899999
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|+...... .....|+.+|...+.+
T Consensus 2021 S~ag~~g~--------------------------------------------------------~g~~~Y~aaKaal~~l 2044 (2512)
T 2vz8_A 2021 SVSCGRGN--------------------------------------------------------AGQANYGFANSAMERI 2044 (2512)
T ss_dssp CHHHHTTC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred chhhcCCC--------------------------------------------------------CCcHHHHHHHHHHHHH
Confidence 97543211 1135799999999999
Q ss_pred HHHh-hCCCcEEEEecCceecC
Q 015874 242 MQQS-KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 242 l~~~-~~~~~~~i~Rp~~V~G~ 262 (399)
.+.. ..|++...+..+.+-+.
T Consensus 2045 ~~~rr~~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A 2045 CEKRRHDGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp HHHHHHTTSCCCEEEECCBCTT
T ss_pred HHHHHHCCCcEEEEEccCcCCc
Confidence 9866 67899999988876554
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=7.8e-08 Score=115.24 Aligned_cols=240 Identities=14% Similarity=0.116 Sum_probs=137.0
Q ss_pred cCCcEEEEecCcch-hHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 10 LENKTILVSGVTGF-VAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 10 ~~~~~IlVTGatG~-IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+.||+++||||++. ||.++++.|+++| .+|.+..|+.+.. ..++.+. ++.+. .+.+
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~G---A~Vvi~~r~~~~~~~~~~~~l~-------------~~l~~-----~G~~ 2192 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGG---ATVIATTSRLDDDRLAFYKQLY-------------RDHAR-----FDAT 2192 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESCCSHHHHHHHHHHH-------------HHHCC-----TTCE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCC---CEEEEEeCChhhhhhHHHHHHH-------------HHHhh-----cCCe
Confidence 78999999999999 9999999999999 5668888876541 1122222 22211 1356
Q ss_pred eEEEeccCCCCCCCCCchhhHHHH-------hcCccEEEEcccc----cCc--------cccH----HHHHHHhHHHHHH
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEEL-------WNELDIMVNSAAI----TKF--------DERY----DVAFGINTLGVIH 143 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~-------~~~~D~Vih~Aa~----~~~--------~~~~----~~~~~~n~~~~~~ 143 (399)
+..+.+|+++++. .......+ +.++|++|||||. ..+ .+.+ +..+++|+.++..
T Consensus 2193 ~~~v~~Dvtd~~~---v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~ 2269 (3089)
T 3zen_D 2193 LWVVPANMASYSD---IDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQR 2269 (3089)
T ss_dssp EEEEECCTTCHHH---HHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHH
T ss_pred EEEEEecCCCHHH---HHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999996442 11122222 2358999999997 111 1223 3448889999888
Q ss_pred HHHHHHhc---cCC-c--eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhc
Q 015874 144 LVNFAKKC---VKL-K--VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (399)
Q Consensus 144 ll~~a~~~---~~~-~--~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (399)
+++.+... .+. . .++..+| ...+..
T Consensus 2270 l~~~~~~~m~~~~~g~~~~ii~~~s-s~~g~~------------------------------------------------ 2300 (3089)
T 3zen_D 2270 LISGLSKIGAERDIASRLHVVLPGS-PNRGMF------------------------------------------------ 2300 (3089)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEEEEC-SSTTSC------------------------------------------------
T ss_pred HHHHHHHHHHHcCCCceeEEEEECC-cccccC------------------------------------------------
Confidence 88876552 121 1 1111111 111100
Q ss_pred cccccccCCCCchhhHhHHHHHHHHHHh--h----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcccc
Q 015874 218 GTERAKLHGWPNTYVFTKTMGEMLMQQS--K----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRC 291 (399)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (399)
.....|+.||...+.+.+.+ + .+++++.+.||.|-+... ...... ...... .
T Consensus 2301 --------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l------~~~~~~----~~~~~~----~ 2358 (3089)
T 3zen_D 2301 --------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGL------MGQNDA----IVSAVE----E 2358 (3089)
T ss_dssp --------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTT------TTTTTT----THHHHG----G
T ss_pred --------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcc------cccchh----HHHHHH----h
Confidence 11246999999999988766 3 257889999998874321 010000 001111 0
Q ss_pred ccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc--EEEecCCCCC-cccHHHHHHHHHH
Q 015874 292 LVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN--IYHVGSSLRN-PVTLVSILDYGFV 350 (399)
Q Consensus 292 ~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~--~yni~~~~~~-~~s~~el~~~l~~ 350 (399)
. . ......+|+|.+++.++......-..+. ...+.++... ...+.++...+++
T Consensus 2359 ~-~-----~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2359 A-G-----VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp G-S-----CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred c-C-----CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 0 0 1112779999999987753211000011 2334455322 3678888876644
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.65 E-value=4.1e-08 Score=79.53 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=68.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+|+|+|+|+ |++|+++++.|++.|. +.|.+..|+..+. +.+. ..++.++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~~~~---~~~~------------------------~~~~~~~ 53 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDLAAL---AVLN------------------------RMGVATK 53 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCHHHH---HHHH------------------------TTTCEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCHHHH---HHHH------------------------hCCCcEE
Confidence 4579999999 9999999999999882 3568888865322 1111 1467788
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+|+. +.+.+.+.+.++|+|||+++.. ....+++++.+. +++.|...+
T Consensus 54 ~~d~~-------~~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~~~~ 101 (118)
T 3ic5_A 54 QVDAK-------DEAGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFDLTE 101 (118)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEECCCS
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEEecC
Confidence 89998 4555557778999999998641 134677777774 565554333
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=9.4e-07 Score=85.11 Aligned_cols=122 Identities=11% Similarity=0.046 Sum_probs=75.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+||+|++++..|+..+.. ..+.++.++... ..++....++.. .. ...+..+.+..+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~-~~~~~~~~dl~~------~~--------~~~~~~~~i~~~ 64 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFM-KDLVLIGREHSI-NKLEGLREDIYD------AL--------AGTRSDANIYVE 64 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTC-CEEEEEECGGGH-HHHHHHHHHHHH------HH--------TTSCCCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCC-CEEEEEcCCCch-hhhHHHHHHHHH------hH--------HhcCCCeEEEeC
Confidence 58999999999999999999987642 345555552111 111111111100 00 001112222221
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
+ +.+.+.++++|+|||+|+.... -.....++..|+.++.++++++.+. . +.+++++|-
T Consensus 65 ~-----------d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 65 S-----------DENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp E-----------TTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred C-----------cchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 1 1011456899999999997643 2445677999999999999999997 5 778887764
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2.5e-07 Score=89.78 Aligned_cols=124 Identities=10% Similarity=0.006 Sum_probs=77.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCC----CcCeEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~----~V~~v~~~~R~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
+.|+|+||||+||||++++..|+..|. .+..|.++.+..+. ....+....++. . .
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~-------------~-------~ 63 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID-------------D-------C 63 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH-------------T-------T
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh-------------h-------h
Confidence 357999999999999999999998773 11255665443100 111111111110 0 0
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEEec
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHVST 162 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~-~~~~~v~~SS 162 (399)
...+ .+|+. ...-..+.++++|+|||+|+.... ......++..|+..+.++++.+.+.. ...+|+++|.
T Consensus 64 ~~~~-~~~i~-------~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 64 AFPL-LAGMT-------AHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TCTT-EEEEE-------EESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cccc-cCcEE-------EecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 0001 12433 111223667899999999997653 24556788999999999999999863 3447888874
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.41 E-value=9.8e-07 Score=85.47 Aligned_cols=119 Identities=15% Similarity=0.127 Sum_probs=75.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.|+|+||||+||+|.+++..|+..|. +..|.++.+... +....++. .. ....++..+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~-----~~~~~dL~-------------~~---~~~~~v~~~ 64 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA-----PGVTADIS-------------HM---DTGAVVRGF 64 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH-----HHHHHHHH-------------TS---CSSCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc-----HhHHHHhh-------------cc---cccceEEEE
Confidence 457999999999999999999988763 345666655443 11111110 00 000122211
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
.+ ..+ ..+.++++|+|||+|+..... .....+...|+.++.++++.+.+. ..+.+++++|-
T Consensus 65 ~~----------t~d-~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 65 LG----------QQQ-LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp ES----------HHH-HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred eC----------CCC-HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 11 112 235678999999999975432 334566889999999999999986 56777777764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=5.3e-07 Score=85.60 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=59.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+||||+|++|++++..|++.| .+|++..|+.++. +.+.+++ ... .++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G---~~V~i~~R~~~~~---~~l~~~~---------~~~----------~~~~~ 171 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKA---QAAADSV---------NKR----------FKVNV 171 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------HHH----------HTCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCHHHH---HHHHHHH---------Hhc----------CCcEE
Confidence 578999999999999999999999999 4578888875332 2222111 000 13556
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
+.+|++ +.+......+++|+|||+|+..
T Consensus 172 ~~~D~~-------~~~~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 172 TAAETA-------DDASRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp EEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred EEecCC-------CHHHHHHHHHhCCEEEECCCcc
Confidence 778998 4455557778899999999853
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.32 E-value=5.1e-06 Score=81.62 Aligned_cols=94 Identities=14% Similarity=0.030 Sum_probs=60.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHH-HhCCCcCeEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhcccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLFVRAADIDSA---------ALRFQNEVLAKDVFNVLKEKWGTRL 79 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll-~~g~~V~~v~~~~R~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (399)
..+|+||||||+..||.+.+..|. +.| ..+..+.|....... ...+.+ ..+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~----------~i~~----- 109 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDE----------AAKR----- 109 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHH----------HHHH-----
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHH----------HHHH-----
Confidence 456999999999999999999987 568 455666665533210 011111 1111
Q ss_pred cccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 80 NSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 80 ~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
.+.+...+.+|+++++......+.+.+.+.++|++||++|..
T Consensus 110 ---~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 110 ---EGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp ---HTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred ---cCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 246788999999975543323333333446799999999965
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.31 E-value=4e-06 Score=80.34 Aligned_cols=119 Identities=11% Similarity=0.002 Sum_probs=75.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+||||+|++|++++..|+..+.. ..+..+.+..+. ..++....++ -+... ....+.+..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~-~~~~~~~~dl-----~~~~~----------~~~~~~v~~~ 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKE-DDTVGQAADT-----NHGIA----------YDSNTRVRQG 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGH-HHHHHHHHHH-----HHHHT----------TTCCCEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEcCCCCh-hhHHHHHHHH-----HHHHh----------hCCCcEEEeC
Confidence 58999999999999999999887642 345555451111 1111111111 00000 0122333222
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
| .+.++++|+|||+|+....+ .....++..|+..+.++++.+.+. ..+.+++++|-
T Consensus 64 ~--------------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 64 G--------------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp C--------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred C--------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 1 13367999999999976432 345667899999999999999997 66777777654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2.8e-06 Score=85.84 Aligned_cols=109 Identities=16% Similarity=0.221 Sum_probs=69.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+++|+|+| +|++|+++++.|++.| .+|.+..|+..+. +.+.+ . ..++..
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G---~~V~v~~R~~~~a---~~la~-------------~---------~~~~~~ 51 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSG---IKVTVACRTLESA---KKLSA-------------G---------VQHSTP 51 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTT---CEEEEEESSHHHH---HHTTT-------------T---------CTTEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEECCHHHH---HHHHH-------------h---------cCCceE
Confidence 3578999998 8999999999999988 4578888864322 11110 0 024677
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHH--h-------HHHHHHHHHHHHhccCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGI--N-------TLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~--n-------~~~~~~ll~~a~~~~~~~ 155 (399)
+.+|++ +.+.+..+++++|+|||+++..........+++. | ...+.++++++++. +++
T Consensus 52 ~~~Dv~-------d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 52 ISLDVN-------DDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp EECCTT-------CHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred EEeecC-------CHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 889998 4444446678999999999864322111222221 2 23577888888885 543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=9.4e-06 Score=67.64 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=62.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+|+|+ |.+|+.+++.|.+.|++| .+..|+.+.. +... ......
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v---~~~d~~~~~~---~~~~------------------------~~~~~~ 52 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINEEKV---NAYA------------------------SYATHA 52 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCHHHH---HTTT------------------------TTCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEE---EEEeCCHHHH---HHHH------------------------HhCCEE
Confidence 45678999998 999999999999999654 6666643211 1000 123456
Q ss_pred EeccCCCCCCCCCchhhHHHH-hcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecc
Q 015874 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTA 163 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~ 163 (399)
+.+|.++ .+.+... ..++|+||++++.. .+.|. .+...+++. +.++++..++.
T Consensus 53 ~~~d~~~-------~~~l~~~~~~~~d~vi~~~~~~---------~~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 53 VIANATE-------ENELLSLGIRNFEYVIVAIGAN---------IQAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp EECCTTC-------HHHHHTTTGGGCSEEEECCCSC---------HHHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred EEeCCCC-------HHHHHhcCCCCCCEEEECCCCc---------hHHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 7788873 3333333 56799999998741 11222 355566665 55666665544
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.4e-05 Score=73.24 Aligned_cols=78 Identities=18% Similarity=0.375 Sum_probs=53.6
Q ss_pred CCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhh
Q 015874 11 ENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74 (399)
Q Consensus 11 ~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~ 74 (399)
.||+|||||| ||.+|.++++.++++| ..|..+.|+......
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G---a~V~lv~~~~~~~~~-------------------- 58 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG---YEVCLITTKRALKPE-------------------- 58 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEECTTSCCCC--------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC---CEEEEEeCCcccccc--------------------
Confidence 5899999999 9999999999999999 566888887532100
Q ss_pred hcccccccccCceEEEeccCCCCCCCCCchhhH---HHHhcCccEEEEcccccCcc
Q 015874 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLK---EELWNELDIMVNSAAITKFD 127 (399)
Q Consensus 75 ~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~---~~~~~~~D~Vih~Aa~~~~~ 127 (399)
....+..+ |+.+ ..++. ...+.++|++||+||...+.
T Consensus 59 --------~~~~~~~~--~v~s------~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 59 --------PHPNLSIR--EITN------TKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp --------CCTTEEEE--ECCS------HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred --------CCCCeEEE--EHhH------HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 01234444 3332 33333 23456799999999987653
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.94 E-value=5.5e-05 Score=62.59 Aligned_cols=99 Identities=14% Similarity=0.198 Sum_probs=61.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|+|+|+ |++|+.+++.|.+.| +.|.+..|+.+. .+.+.+ ..++.++
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g---~~v~~~d~~~~~---~~~~~~-----------------------~~~~~~~ 52 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKDI---CKKASA-----------------------EIDALVI 52 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHH-----------------------HCSSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHH---HHHHHH-----------------------hcCcEEE
Confidence 3589999986 999999999999999 456777775432 122211 0245567
Q ss_pred eccCCCCCCCCCchhhHHHH-hcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+|.++ .+.+... ..++|+||++.... ..| ..+.+.++.. +..+++..+
T Consensus 53 ~~d~~~-------~~~l~~~~~~~~d~vi~~~~~~----------~~~----~~~~~~~~~~-~~~~ii~~~ 102 (140)
T 1lss_A 53 NGDCTK-------IKTLEDAGIEDADMYIAVTGKE----------EVN----LMSSLLAKSY-GINKTIARI 102 (140)
T ss_dssp ESCTTS-------HHHHHHTTTTTCSEEEECCSCH----------HHH----HHHHHHHHHT-TCCCEEEEC
T ss_pred EcCCCC-------HHHHHHcCcccCCEEEEeeCCc----------hHH----HHHHHHHHHc-CCCEEEEEe
Confidence 888873 3333232 46899999997531 122 2345566665 455666533
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.7e-05 Score=72.57 Aligned_cols=77 Identities=12% Similarity=0.200 Sum_probs=53.2
Q ss_pred hcCCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHH
Q 015874 9 FLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72 (399)
Q Consensus 9 ~~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~ 72 (399)
.+.||+|||||| ||.||.++++.|+++| ..|.+..|+.... .
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G---a~V~l~~~~~~l~-~------------------ 62 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP-T------------------ 62 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC-C------------------
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC---CEEEEEECCcccc-c------------------
Confidence 368999999999 7999999999999999 4556666654211 0
Q ss_pred hhhcccccccccCceEEEeccCCCCCCCCCchhhHH---HHhcCccEEEEcccccCc
Q 015874 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKE---ELWNELDIMVNSAAITKF 126 (399)
Q Consensus 73 ~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~---~~~~~~D~Vih~Aa~~~~ 126 (399)
...+. ..|+.+ ..++.. ..+.++|++||+||...+
T Consensus 63 -----------~~g~~--~~dv~~------~~~~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 63 -----------PPFVK--RVDVMT------ALEMEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp -----------CTTEE--EEECCS------HHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred -----------CCCCe--EEccCc------HHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 01222 356665 333332 335679999999997654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.89 E-value=7e-05 Score=62.63 Aligned_cols=75 Identities=11% Similarity=0.115 Sum_probs=52.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+.+++|+|+|+ |.+|+++++.|.++|+ .|.++.|+++.. ++..+ ..+.+
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~---~V~~id~~~~~~---~~~~~------------------------~~~~~ 52 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAAGK---KVLAVDKSKEKI---ELLED------------------------EGFDA 52 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCHHHH---HHHHH------------------------TTCEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEECCHHHH---HHHHH------------------------CCCcE
Confidence 34578999997 9999999999999995 457777654322 22221 45778
Q ss_pred EeccCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
+.+|.+ +.+.+..+ ..++|+||.+.+
T Consensus 53 ~~gd~~-------~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 53 VIADPT-------DESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp EECCTT-------CHHHHHHSCCTTCSEEEECCS
T ss_pred EECCCC-------CHHHHHhCCcccCCEEEEecC
Confidence 899999 44544333 357999998776
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00011 Score=70.70 Aligned_cols=116 Identities=15% Similarity=0.111 Sum_probs=73.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+||+|++|..++..|+..|. +..|.++.+.. . +....++ .... ...++..+.+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~--~---~~~a~dL-------------~~~~---~~~~l~~~~~ 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH--T---PGVAADL-------------SHIE---TRATVKGYLG 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS--H---HHHHHHH-------------TTSS---SSCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc--c---HHHHHHH-------------hccC---cCceEEEecC
Confidence 5899999999999999999887663 45678887765 1 1111111 0000 0012222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
..+ ..+.++++|+||++|+.... .+....++..|+..+..+.+.+.+..+..+++++|
T Consensus 59 ----------t~d-~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 59 ----------PEQ-LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp ----------GGG-HHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred ----------CCC-HHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 012 23567899999999997643 23345568899999999999998863334566543
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00022 Score=60.84 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=53.8
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|.+...+++|+|+|+ |.+|..+++.|.+.| ..|.++.|+.+....+.. ..
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g---~~V~vid~~~~~~~~~~~--------------------------~~ 62 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSG---HSVVVVDKNEYAFHRLNS--------------------------EF 62 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGGGGSCT--------------------------TC
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHh--------------------------cC
Confidence 456788899999995 999999999999999 566888887654321100 12
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHH-hcCccEEEEcccc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~ 123 (399)
++..+.+|..+ .+.+... ..++|+||.+.+.
T Consensus 63 g~~~~~~d~~~-------~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 63 SGFTVVGDAAE-------FETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CSEEEESCTTS-------HHHHHTTTGGGCSEEEECSSC
T ss_pred CCcEEEecCCC-------HHHHHHcCcccCCEEEEEeCC
Confidence 45567788763 3333232 4679999998764
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00011 Score=71.31 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=69.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+++.+++|.|+|++|++|+.++..++..|.. .+|.++.+..++ ++....+|.. +. +...++
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~-~evvLiDi~~~k---~~g~a~DL~~-----------~~----~~~~~i 64 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLT-PNLCLYDPFAVG---LEGVAEEIRH-----------CG----FEGLNL 64 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTCC-SCEEEECSCHHH---HHHHHHHHHH-----------HC----CTTCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCCC-CEEEEEeCCchh---HHHHHHhhhh-----------Cc----CCCCce
Confidence 5778899999999999999999999998842 356666553322 1221111100 00 001122
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.+ ..+. .+.++++|+||.+||...-+ .....++..|+.....+.+.+.+.
T Consensus 65 ~~-------------t~d~-~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~ 115 (343)
T 3fi9_A 65 TF-------------TSDI-KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY 115 (343)
T ss_dssp EE-------------ESCH-HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE-------------cCCH-HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 0122 25578999999999975432 445677899999999999999886
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.67 E-value=8.3e-05 Score=75.38 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=55.0
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
...+.+++|+|+|| |++|++++..|++. + .+|.+..|+.++. +.+.+ . .
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g---~~V~v~~R~~~ka---~~la~-------------~----------~ 67 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDD---INVTVACRTLANA---QALAK-------------P----------S 67 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTT---EEEEEEESSHHHH---HHHHG-------------G----------G
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCC---CeEEEEECCHHHH---HHHHH-------------h----------c
Confidence 34567889999997 99999999999987 5 4678888875432 11110 0 1
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
++..+.+|+.+ .+.+..+++++|+|||+++..
T Consensus 68 ~~~~~~~D~~d-------~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 68 GSKAISLDVTD-------DSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp TCEEEECCTTC-------HHHHHHHHHTSSEEEECSCGG
T ss_pred CCcEEEEecCC-------HHHHHHHHcCCCEEEECCchh
Confidence 35567788884 444446677999999999864
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=4.8e-05 Score=73.71 Aligned_cols=120 Identities=16% Similarity=0.085 Sum_probs=71.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCe-----EEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKK-----LYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~-----v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.++|.||||+|+||++++..|+..+. +.+ +.++.+.... ..++....+| .. ....-
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~-~~~~g~a~DL-------------~~----~~~~~ 63 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMM-GVLDGVLMEL-------------QD----CALPL 63 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGH-HHHHHHHHHH-------------HH----TCCTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCcc-ccchhhHhhh-------------Hh----hhhcc
Confidence 47899999999999999999987653 112 5666554311 1112111111 00 00000
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEe
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~-~~v~~S 161 (399)
..-+.+ . .+ ..+.++++|+|||+||...-+ +....+++.|+..+.++++.+.+..... +++.+|
T Consensus 64 ~~~~~~--~--------~~-~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvs 129 (333)
T 5mdh_A 64 LKDVIA--T--------DK-EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (333)
T ss_dssp EEEEEE--E--------SC-HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cCCEEE--c--------CC-cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 111111 1 11 125578999999999876432 4556778999999999999999863222 455554
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00029 Score=59.79 Aligned_cols=80 Identities=11% Similarity=0.202 Sum_probs=54.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|..++|+|+|+ |.+|+++++.|.+.|+ .|.++.|+... ..+++.+.. ..++.+
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~---~V~vid~~~~~--~~~~~~~~~---------------------~~~~~~ 53 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQRGQ---NVTVISNLPED--DIKQLEQRL---------------------GDNADV 53 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCCHH--HHHHHHHHH---------------------CTTCEE
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCChH--HHHHHHHhh---------------------cCCCeE
Confidence 34578999995 9999999999999995 45777775311 111221110 246888
Q ss_pred EeccCCCCCCCCCchhhHHHH-hcCccEEEEcccc
Q 015874 90 VPGDISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~ 123 (399)
+.||.+ +.+.+.+. ..++|+||-+.+.
T Consensus 54 i~gd~~-------~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 54 IPGDSN-------DSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp EESCTT-------SHHHHHHHTTTTCSEEEECSSC
T ss_pred EEcCCC-------CHHHHHHcChhhCCEEEEecCC
Confidence 999998 45555454 6789999988653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.64 E-value=7e-05 Score=74.50 Aligned_cols=83 Identities=19% Similarity=0.120 Sum_probs=56.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|+|+|| |+||+++++.|++.|.-...|.+..|+.++.. .+.+.+ +. ..+.++..+.+
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~---~la~~l-------------~~----~~~~~~~~~~~ 60 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQ---EIAQSI-------------KA----KGYGEIDITTV 60 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHH---HHHHHH-------------HH----TTCCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHH---HHHHHh-------------hh----hcCCceEEEEe
Confidence 68999999 99999999999987731136788888765432 222111 00 00136788899
Q ss_pred cCCCCCCCCCchhhHHHHhcC--ccEEEEcccc
Q 015874 93 DISSEDLGLKDSNLKEELWNE--LDIMVNSAAI 123 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~--~D~Vih~Aa~ 123 (399)
|++ +.+.+.+++++ +|+|||+|+.
T Consensus 61 D~~-------d~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 61 DAD-------SIEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECSCG
T ss_pred cCC-------CHHHHHHHHHhhCCCEEEECCCc
Confidence 999 44445566665 9999999985
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00015 Score=71.01 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=52.2
Q ss_pred hhcCC--cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 8 EFLEN--KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 8 ~~~~~--~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
..++| |+|+|.|| |++|+.+++.|.+ . +.|.+..|+.... ++. ..
T Consensus 10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~---~~v~~~~~~~~~~---~~~-------------------------~~ 56 (365)
T 3abi_A 10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-E---FDVYIGDVNNENL---EKV-------------------------KE 56 (365)
T ss_dssp ------CCEEEEECC-SHHHHHHHHHHTT-T---SEEEEEESCHHHH---HHH-------------------------TT
T ss_pred ccccCCccEEEEECC-CHHHHHHHHHHhc-C---CCeEEEEcCHHHH---HHH-------------------------hc
Confidence 34444 68999998 9999999998865 4 4566666654322 111 14
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
.+..+..|+. +.+.+..+.+++|+||++++.
T Consensus 57 ~~~~~~~d~~-------d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 57 FATPLKVDAS-------NFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp TSEEEECCTT-------CHHHHHHHHTTCSEEEECCCG
T ss_pred cCCcEEEecC-------CHHHHHHHHhCCCEEEEecCC
Confidence 5667788988 566676888999999999875
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0012 Score=57.51 Aligned_cols=75 Identities=11% Similarity=0.164 Sum_probs=52.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.+++|+|+| .|.+|..+++.|.+. |+ .|.++.|+.+.. +.+.+ .++.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~---~V~vid~~~~~~---~~~~~------------------------~g~~ 85 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGK---ISLGIEIREEAA---QQHRS------------------------EGRN 85 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCS---CEEEEESCHHHH---HHHHH------------------------TTCC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCC---eEEEEECCHHHH---HHHHH------------------------CCCC
Confidence 4467899998 699999999999998 95 457777765332 22111 3566
Q ss_pred EEeccCCCCCCCCCchhhHHHH--hcCccEEEEccc
Q 015874 89 FVPGDISSEDLGLKDSNLKEEL--WNELDIMVNSAA 122 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~--~~~~D~Vih~Aa 122 (399)
.+.+|.+ +.+.+..+ ..++|+||.+.+
T Consensus 86 ~~~gd~~-------~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 86 VISGDAT-------DPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp EEECCTT-------CHHHHHTBCSCCCCCEEEECCS
T ss_pred EEEcCCC-------CHHHHHhccCCCCCCEEEEeCC
Confidence 7788988 44444344 567999998765
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0005 Score=60.73 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=32.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
..+|++|+|+||+|.||..+++.+...| .+|++..|+.
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~ 73 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD 73 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 3467899999999999999999999899 5567877764
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0025 Score=57.23 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=51.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|+|+ |.+|+++++.|.+.|++ |.++.++++.. +++.+ ..++.++.|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~---v~vid~~~~~~---~~l~~-----------------------~~~~~~i~g 50 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYG---VVIINKDRELC---EEFAK-----------------------KLKATIIHG 50 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCC---EEEEESCHHHH---HHHHH-----------------------HSSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHHHH---HHHHH-----------------------HcCCeEEEc
Confidence 67999996 99999999999999954 57776654322 22111 135778999
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEcccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~ 123 (399)
|.+ +.+.+... ..++|+||-+.+.
T Consensus 51 d~~-------~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 51 DGS-------HKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CTT-------SHHHHHHHTCCTTCEEEECCSC
T ss_pred CCC-------CHHHHHhcCcccCCEEEEecCC
Confidence 999 45555443 5689999976543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0063 Score=50.70 Aligned_cols=73 Identities=14% Similarity=0.159 Sum_probs=51.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|+|.|+ |.+|+.+++.|.+.|+ .|.++.++++.. ++..+ .++.++.|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~---~v~vid~~~~~~---~~~~~------------------------~g~~~i~g 56 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDI---PLVVIETSRTRV---DELRE------------------------RGVRAVLG 56 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCHHHH---HHHHH------------------------TTCEEEES
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCC---CEEEEECCHHHH---HHHHH------------------------cCCCEEEC
Confidence 46999985 9999999999999995 457777765432 22221 46778999
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEcccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAAI 123 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa~ 123 (399)
|.+ +.+.+... ..++|+||-+.+.
T Consensus 57 d~~-------~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 57 NAA-------NEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CTT-------SHHHHHHTTGGGCSEEEECCSC
T ss_pred CCC-------CHHHHHhcCcccCCEEEEECCC
Confidence 999 45554333 4578999987654
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0057 Score=58.56 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=53.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+|+|+ |.+|++++..|.+.|. .+|++..|+....+.++.+.+++ +.. ....+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~~~a~~la~~~-------------~~~------~~~~~ 209 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFYANAEKTVEKI-------------NSK------TDCKA 209 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHH-------------HHH------SSCEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchHHHHHHHHHHh-------------hhh------cCCce
Confidence 57899999997 8999999999999994 36788899844333333333222 100 11222
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
...++. +.+.+.+...++|+|||+...
T Consensus 210 ~~~~~~-------~~~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 210 QLFDIE-------DHEQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp EEEETT-------CHHHHHHHHHTCSEEEECSST
T ss_pred EEeccc-------hHHHHHhhhcCCCEEEECccC
Confidence 233444 223333556789999998764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.01 Score=57.14 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=69.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|+|+ |++|+.++..|+..|.- ..+.++.+..++. +....+|.. + .+.....+...
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~-~~l~l~D~~~~k~---~g~a~DL~~-----------~---~~~~~~~v~i~ 64 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGIT-DELVVIDVNKEKA---MGDVMDLNH-----------G---KAFAPQPVKTS 64 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCC-SEEEEECSCHHHH---HHHHHHHHH-----------T---GGGSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-ceEEEEecchHHH---HHHHHHHHh-----------c---cccccCCeEEE
Confidence 4579999996 99999999999988842 3667776643322 221111100 0 01111233333
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.+| . +.++++|+||.+||...-+ .....++..|+.-...+.+.+.+.
T Consensus 65 ~~~----------~----~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~ 112 (326)
T 3pqe_A 65 YGT----------Y----EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS 112 (326)
T ss_dssp EEC----------G----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCc----------H----HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 1 3467899999999975433 445677899999999999999886
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0021 Score=57.34 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=30.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|+|+||+|++|+++++.|++.| ++|.+..|+.+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r~~~ 35 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRREE 35 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 589999999999999999999999 45678877653
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.002 Score=62.46 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=29.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
|+|+|.||||++|+.+++.|+++++.+..+..+.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 6899999999999999999998776666666665
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0013 Score=61.83 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=21.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHh
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRV 35 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~ 35 (399)
++|+|.|+|++|.+|+.+++.+.+.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~ 28 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALAL 28 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhC
Confidence 4579999999999999999988753
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.017 Score=55.23 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=71.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|.|+||+|.+|..++..|... +. +..+.++.+.+ +. +...-++. . . + ...++..+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~-~~el~L~Di~~-~~---~G~a~Dl~-------------~-~-~-~~~~v~~~~ 59 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAP-VT---PGVAVDLS-------------H-I-P-TAVKIKGFS 59 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-TEEEEEECSST-TH---HHHHHHHH-------------T-S-C-SSEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-CceEEEEecCC-Cc---hhHHHHhh-------------C-C-C-CCceEEEec
Confidence 68999999999999999988775 42 34667776654 21 11111110 0 0 0 011222221
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
+ + +. ...++++|+||-+||...-+ .....+++.|+.-...+.+.+.++.+.-.++.+
T Consensus 60 ~--~---------~~-~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvv 117 (312)
T 3hhp_A 60 G--E---------DA-TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117 (312)
T ss_dssp S--S---------CC-HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred C--C---------Cc-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 1 1 11 15578999999999976433 556788999999999999999886232334433
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.018 Score=55.11 Aligned_cols=117 Identities=13% Similarity=0.038 Sum_probs=69.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|+ |.+|+.++..|+..|. +..+.++.+.+++.+. ...++.. ... ...........
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~~g---~a~DL~~-----~~~---------~~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMPQG---KALDMRE-----SSP---------IHGFDTRVTGT 61 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHHHH---HHHHHHH-----HHH---------HHTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHHHH---HHHHHhc-----ccc---------ccCCCcEEEEC
Confidence 68999996 9999999999998874 3477888777654321 1111100 000 00112222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
| +. ..++++|+||-+||...-+ .....++..|+.-...+.+.+.++.+...++.+|
T Consensus 62 ~---------~~----~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 62 N---------DY----GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp S---------SS----GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred C---------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 2 11 3467999999999875432 3456778899999999999998863323344333
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0052 Score=59.24 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=34.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
...|++|+|+||+|.||..+++.+...| .+|++..|+.++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~~~~ 207 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGEGKE 207 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSTTHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCHHHH
Confidence 3467899999999999999999998889 5678888876543
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0041 Score=59.56 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=32.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..|++|+||||+|.||..+++.+...| .+|++..|+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~ 181 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDE 181 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 467899999999999999999999999 56688877643
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0046 Score=59.04 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=32.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..|++|+|+||+|.||..+++.+...| .+|++..|+.+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~~ 176 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQ 176 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 467899999999999999999999999 56788887643
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.017 Score=55.37 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=72.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.|+.++|.|+| +|.+|..++..|+..+. . .|.+..+++++.+ ....++..-.. .......
T Consensus 2 ~m~~~kI~iiG-aG~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~~---g~a~dL~~~~~--------------~~~~~~~ 61 (321)
T 3p7m_A 2 AMARKKITLVG-AGNIGGTLAHLALIKQL-G-DVVLFDIAQGMPN---GKALDLLQTCP--------------IEGVDFK 61 (321)
T ss_dssp -CCCCEEEEEC-CSHHHHHHHHHHHHTTC-C-EEEEECSSSSHHH---HHHHHHHTTHH--------------HHTCCCC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCC-c-eEEEEeCChHHHH---HHHHHHHhhhh--------------hcCCCcE
Confidence 35678999999 59999999999988774 2 6777777665432 11111100000 0001111
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
.... . +. +.++++|+||.+|+...-+ .....++..|+.-...+.+.+.+..+...++.+
T Consensus 62 v~~t--~-------d~----~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivv 121 (321)
T 3p7m_A 62 VRGT--N-------DY----KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI 121 (321)
T ss_dssp EEEE--S-------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEEc--C-------CH----HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 1111 1 11 3467899999999875432 445667888999999999999886333344444
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0049 Score=59.02 Aligned_cols=39 Identities=8% Similarity=0.128 Sum_probs=33.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|++|+|+||+|.||..+++.+...| .+|++..|+.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~~~~ 181 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVSTEE 181 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 3467899999999999999999999989 56788888653
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0037 Score=60.22 Aligned_cols=108 Identities=10% Similarity=0.024 Sum_probs=58.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..+++|.|+|+ |.+|+.++..|+..|. +..+.++.+..++. +....+|. . ...+. ..+..
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~---~g~a~DL~-------------~-~~~~~-~~~~i 66 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKT---KGDAIDLE-------------D-ALPFT-SPKKI 66 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHH-------------T-TGGGS-CCCEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHhhHh-------------h-hhhhc-CCcEE
Confidence 45679999996 9999999999998874 23667766543322 21111110 0 00000 12333
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..+| . +.++++|+||.+||...-+ +....+++.|+.-...+.+.+.++
T Consensus 67 ~~~~----------~----~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 67 YSAE----------Y----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp EECC----------G----GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred EECc----------H----HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3221 1 3467999999999975432 345667888999999999999886
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.023 Score=53.74 Aligned_cols=117 Identities=15% Similarity=0.056 Sum_probs=71.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.+|..++..|+..|. +..|.+..+++++.+.. .-++ +..... ..........
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g~---~~dl------~~~~~~--------~~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVGE---AMDL------AHAAAG--------IDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHHH---HHHH------HHHHHT--------TTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHHH---HHHH------Hhhhhh--------cCCCCEEEEe
Confidence 68999999 9999999999998884 23677777765432211 1011 000000 0011122111
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ + .+.++++|+||.+|+...-+ .....++..|+.-...+.+.+.+..+...++.+|
T Consensus 62 --~-------d----~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 62 --A-------D----YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp --S-------C----GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred --C-------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 1 1 14467999999999876433 4566778899999999999998863333444444
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.037 Score=52.89 Aligned_cols=109 Identities=10% Similarity=0.065 Sum_probs=67.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++.++|.|+|| |.+|..++..|+..+. +..+....+.+++. +....++ ... .+..+..+.+
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~~~~---~g~~~dl------~~~--------~~~~~~~~~v 64 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDTEKV---RGDVMDL------KHA--------TPYSPTTVRV 64 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCHHHH---HHHHHHH------HHH--------GGGSSSCCEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHh---hhhhhhH------Hhh--------hhhcCCCeEE
Confidence 45679999998 9999999999988774 24566665443221 1111111 000 0111122333
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.. | +. +.++++|+||-+|+...- -+....++..|+.-...+.+.+.+.
T Consensus 65 ~~-~---------~~----~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (317)
T 3d0o_A 65 KA-G---------EY----SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS 113 (317)
T ss_dssp EE-C---------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred Ee-C---------CH----HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 2 11 336799999999987543 2445567888999999999998886
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0063 Score=58.91 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=33.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
...|++|+|+||+|.||..++..+...| .+|++..|+.++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~~~ 199 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQKK 199 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 3467899999999999999999999889 567888876543
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0059 Score=59.14 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=33.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|++|+|+||+|.||..+++.+...| .+|++.+|+++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~~ 206 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEE 206 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChh
Confidence 3467899999999999999999999889 56788887654
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.026 Score=54.22 Aligned_cols=119 Identities=15% Similarity=0.141 Sum_probs=70.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++++|.|+|| |.+|..++..|+..|. . .|.+..+.+++.+. ...++.....+. + ...++..
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~-~-~v~L~Di~~~~~~g---~~~dl~~~~~~~------~------~~~~v~~ 66 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKEL-G-DVVLFDIAEGTPQG---KGLDIAESSPVD------G------FDAKFTG 66 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHHH---HHHHHHHHHHHH------T------CCCCEEE
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCchhHHH---HHHHHhchhhhc------C------CCCEEEE
Confidence 56789999998 9999999999999885 1 67777776654321 111110000000 0 0112221
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. . +. +.++++|+||.+|+...-+ .....++..|+.-...+.+.+.+..+...++.+|
T Consensus 67 t-~----------d~----~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 67 A-N----------DY----AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp E-S----------SG----GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred e-C----------CH----HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 1 1 11 3467999999999865332 3345568889999999999998863333444443
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.034 Score=52.66 Aligned_cols=107 Identities=16% Similarity=0.043 Sum_probs=67.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.||+.++..|+.++. +.++..+...+++. +....+| -+ .. ............
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~-~~el~L~Di~~~~~---~G~a~DL-----~h-~~--------~~~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLA---VGEAMDL-----AH-AA--------AGIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHH---HHHHHHH-----HH-HH--------GGGTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCCCcc---hhhhhhh-----hc-cc--------ccCCCCCeEecC
Confidence 68999995 9999999999988763 35566665443221 1111111 00 00 001112222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+ +. +.++++|+||-.||...-+ .....++..|..-.+.+.+.+.++
T Consensus 62 ~---------d~----~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~ 108 (294)
T 2x0j_A 62 A---------DY----SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (294)
T ss_dssp S---------CG----GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C---------CH----HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 1 11 2357999999999987543 567888999999999999999886
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.03 Score=51.57 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=31.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.+++++|+|.|+ |.+|+.+++.|.+.|. .++.+..++.
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv--~~i~lvD~d~ 65 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAGV--GNLTLLDFDT 65 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcCC--CeEEEEcCCC
Confidence 3467789999994 7899999999999994 3567776665
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0056 Score=59.84 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=31.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++++|+|+|+ |.||..+++.+...| .+|.+..|+.+
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~G---a~V~~~d~~~~ 200 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMG---AQVTILDVNHK 200 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCHH
Confidence 67899999999 999999999999999 45688877653
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0049 Score=59.06 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=32.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-+|++|+|+||+|.||..+++.+...| .+|++..|+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~ 185 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGAE 185 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 3468899999999999999999888889 56788887654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.023 Score=55.59 Aligned_cols=122 Identities=14% Similarity=0.085 Sum_probs=70.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCe---EEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKK---LYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~---v~~~~R~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+.++|.|+||+|.||.+++..|+..+- +-. +.......+. ...++...-+| ..-..+. ..+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l-~~e~~~l~L~d~d~~~~~~~~~G~amDL-------------~h~~~p~-~~~ 95 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEV-FGQDQPIALKLLGSERSFQALEGVAMEL-------------EDSLYPL-LRE 95 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHH-------------HTTTCTT-EEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCc-CCCCceeEEEecCccchhhhhHHHHHhH-------------Hhhhhhh-cCC
Confidence 457899999999999999999987552 111 3333222221 11122222121 0000000 011
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+.. . ..+ ...++++|+||-.||...- -+....+++.|+.-.+.+.+.+.+. .+...++.+|
T Consensus 96 v~i-----~-------~~~--y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 96 VSI-----G-------IDP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp EEE-----E-------SCH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cEE-----e-------cCC--HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 221 1 111 2567899999999997543 3567788999999999999998874 2333444444
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.018 Score=55.07 Aligned_cols=46 Identities=26% Similarity=0.304 Sum_probs=35.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF 58 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~ 58 (399)
+++++++|+|+ |.+|++++..|.+.|. .+|++..|+......++.+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~~~~~a~~l 191 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDDFFEKAVAF 191 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTHHHHHHHH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCchHHHHHHH
Confidence 56899999997 8899999999999984 3678899985443333333
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.016 Score=55.76 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=33.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
-.|.+|+|+||+|.||...+..+...| .+|++.+|+.++.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~~~ 197 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTAAT 197 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGGGH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHH
Confidence 467899999999999999999988889 5678888876544
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.035 Score=53.08 Aligned_cols=119 Identities=14% Similarity=0.092 Sum_probs=72.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC--CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA--DIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
++.++|.|+|+ |.+|..++..|+..|. ..|.+..+++ .+.. ....++ .+.. +..+ ...++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~---g~a~dl-----~~~~-~~~~------~~~~i 67 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPTK---GKALDM-----LEAS-PVQG------FDANI 67 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHH---HHHHHH-----HHHH-HHHT------CCCCE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHHH---HhhhhH-----HHhh-hhcc------CCCEE
Confidence 34579999996 9999999999999884 2667776762 2221 111111 1100 0000 01122
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.. .+ +. ..++++|+||-+||...-+ .....++..|+.-...+.+.+.+..+...++.+|
T Consensus 68 ~~--t~---------d~----~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 68 IG--TS---------DY----ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp EE--ES---------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EE--cC---------CH----HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 21 11 11 3467999999999876433 4567788999999999999998863333444444
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.01 Score=58.01 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=27.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
++|.|.||||++|..|++.|.+.++.+..+..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 6899999999999999998877655444556554
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.11 Score=50.11 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=67.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCc-----CeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNV-----KKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V-----~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
.+...+|.|+||+|.||+.|+..|.. +.-+ ..+..+...+.. ..++.+.-+|. ...+
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~-~~~~Gva~DL~----------~~~~------ 82 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPAL-KALAGVEAELE----------DCAF------ 82 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHH----------HTTC------
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCcc-ccchhhhhhhh----------hcCc------
Confidence 34556999999999999999987765 3221 134554333211 11222221210 0000
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
......+.++ + ....++++|+||-.||...-+ +....+++.|..-.+.+.+.+.++
T Consensus 83 ~~~~~~~~~~-----------~-~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 83 PLLDKVVVTA-----------D-PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp TTEEEEEEES-----------C-HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEcC-----------C-hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 0111122221 1 125578999999999986543 567888999999999999998875
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.026 Score=53.99 Aligned_cols=107 Identities=15% Similarity=0.132 Sum_probs=64.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|+|+ |++|..++..|+..+. +..|.++.+.+++.+.. ..++ .... .. ...+.+.
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~---~~dl-------------~~~~-~~-~~~~~i~ 65 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGE---AMDI-------------NHGL-PF-MGQMSLY 65 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHH---HHHH-------------TTSC-CC-TTCEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHH---HHHH-------------HHhH-Hh-cCCeEEE
Confidence 3478999998 9999999999988764 34678887766544321 1111 0000 00 0122222
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
. . + . +.++++|+||.+++...- -.....++..|+.....+.+.+.++
T Consensus 66 ~---~-------~---~-~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (318)
T 1y6j_A 66 A---G-------D---Y-SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 113 (318)
T ss_dssp ------------C---G-GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E---C-------C---H-HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh
Confidence 1 1 1 1 336799999999987542 2344567888999999999999886
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0047 Score=60.09 Aligned_cols=38 Identities=13% Similarity=0.296 Sum_probs=29.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCC----CcCeEEEEEecC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQP----NVKKLYLFVRAA 49 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~----~V~~v~~~~R~~ 49 (399)
.+++|+|.||||++|+.|++.|++.++ . .++..+.++.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~-~ei~~l~s~~ 49 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGR-LRIGALTAAT 49 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTS-EEEEEEEESS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCcc-EEEEEEECCC
Confidence 457999999999999999999987541 3 3566666543
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.021 Score=54.70 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=35.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS 53 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~ 53 (399)
.-+|.+|+|+||+|.||...+..+...| .+|++..|+.++.+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~ 183 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNKHTE 183 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSSTTHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHHHHH
Confidence 3467899999999999999998888889 56788888876543
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.013 Score=55.85 Aligned_cols=40 Identities=18% Similarity=0.099 Sum_probs=33.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-+|++|+|+||+|.||...+..+...| .+|++.+|++++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~ 177 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSPEK 177 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 3467899999999999999999988889 567888876543
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.011 Score=56.69 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=32.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..|++|+|+||+|.||..+++.+...| .+|++..|+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~~ 191 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSKE 191 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 467899999999999999999998889 56788877653
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.019 Score=51.91 Aligned_cols=72 Identities=10% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..++|+|+|+ |.+|+.+++.|.+.| + |.++.|+.+.. +... .++.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~~~---~~~~-------------------------~~~~~i 54 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRK---KVLR-------------------------SGANFV 54 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGGHH---HHHH-------------------------TTCEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHHHH---HHHh-------------------------cCCeEE
Confidence 3468999997 999999999999888 4 56666654322 1110 357889
Q ss_pred eccCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
.||.+ +.+.+... ..++|.||.+.+
T Consensus 55 ~gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 55 HGDPT-------RVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCTT-------CHHHHHHTTCTTCSEEEECCS
T ss_pred EcCCC-------CHHHHHhcCcchhcEEEEcCC
Confidence 99998 45555444 568999998764
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.015 Score=55.88 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=32.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~ 50 (399)
...|++|+|+||+|.||..++..+... | .+|++..|+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~~ 207 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVREE 207 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCHH
Confidence 346789999999999999999999888 9 56688877653
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0099 Score=57.44 Aligned_cols=38 Identities=18% Similarity=0.091 Sum_probs=31.8
Q ss_pred cCC--cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LEN--KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~--~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
..| ++|+|+||+|.||..++..+...|. .+|++..|+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~~ 196 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGTH 196 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 457 8999999999999999999998894 1678887764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0086 Score=55.90 Aligned_cols=38 Identities=16% Similarity=0.173 Sum_probs=32.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++++|+|+|+ |.+|++++..|++.| .+|++..|+.++
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~~~ 154 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVSR 154 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCHHH
Confidence 57899999998 779999999999999 567888777543
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.017 Score=55.67 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=27.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
+++|.|.||||++|+.+++.|.++++...++.++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 47899999999999999999988642224566665
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=95.80 E-value=0.054 Score=52.08 Aligned_cols=120 Identities=18% Similarity=0.096 Sum_probs=71.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
...+++|.|+|+ |.+|+.++..|+..|. +..+.+..+..++ ++....+|.. . ..+. ....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~---~~g~a~DL~~-----------~---~~~~-~~~~ 75 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIEDK---LKGEMMDLQH-----------G---SLFL-KTPK 75 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHH---HHHHHHHHHH-----------T---GGGC-SCCE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChHH---HHHHHHhhhh-----------h---hhcc-CCCe
Confidence 356689999997 9999999999998773 2356776554322 2222212100 0 0000 1111
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+..+ +. +.++++|+||.+||...-+ +....+++.|+.-...+.+.+.++.+.-.++.+|
T Consensus 76 i~~~~---------d~----~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 76 IVSSK---------DY----SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp EEECS---------SG----GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEcC---------CH----HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 11111 11 2367999999999976432 4556778999999999999998862333444333
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.017 Score=55.44 Aligned_cols=38 Identities=13% Similarity=0.047 Sum_probs=32.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..|++|+|+||+|.+|..++..+...| .+|++..|+.+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~~ 202 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSED 202 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 467899999999999999999998889 56788887654
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.015 Score=55.51 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=32.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-+|.+|+|+||+|.||...+..+...| .+|++.+|+.+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~ 184 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTDE 184 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence 3467899999999999999999888889 56788887654
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.018 Score=55.71 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=27.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
|++|.|.||||++|..|++.|.++.+.+.++..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 57899999999999999997777544444556554
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.02 Score=55.28 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=33.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
-.|.+|+|+||+|.||...+..+...| .+|++.+|+.++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~ 204 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGSTGK 204 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH
Confidence 467899999999999999999998889 567888877644
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=95.61 E-value=0.019 Score=54.05 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=33.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
-.|.+|+|+||+|.+|...+..+...| .+|++.+|+.++.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~~~ 163 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEKL 163 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGGS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH
Confidence 467899999999999999999888888 5678888876554
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.078 Score=50.46 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=69.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.+|..++..|+..+. +..+.++.+..++. +....++ ... ..+ ...+.+..+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~k~---~g~a~dl-------------~~~-~~~-~~~~~v~~~ 60 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDRKLA---QAHAEDI-------------LHA-TPF-AHPVWVWAG 60 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH---HHHHHHH-------------HTT-GGG-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHH---HHHHHHH-------------HHh-Hhh-cCCeEEEEC
Confidence 58999998 9999999999888653 45677776653222 2111111 000 000 122333221
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
| . +.++++|+||.+|+...-+ .....++..|+.-...+.+.+.++.+...++.+
T Consensus 61 ~----------~----~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (310)
T 2xxj_A 61 S----------Y----GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA 115 (310)
T ss_dssp C----------G----GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred C----------H----HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 1 1 3367999999999875432 344566888999999999998886333344433
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.038 Score=54.81 Aligned_cols=74 Identities=14% Similarity=0.221 Sum_probs=52.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.+++|+|+|. |-+|+.+++.|.+.|+ .|.++.++.+.. +..++ .++.++
T Consensus 3 ~~~~viIiG~-Gr~G~~va~~L~~~g~---~vvvId~d~~~v---~~~~~------------------------~g~~vi 51 (413)
T 3l9w_A 3 HGMRVIIAGF-GRFGQITGRLLLSSGV---KMVVLDHDPDHI---ETLRK------------------------FGMKVF 51 (413)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCHHHH---HHHHH------------------------TTCCCE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCHHHH---HHHHh------------------------CCCeEE
Confidence 3467999995 9999999999999994 457776665432 22211 456788
Q ss_pred eccCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
.||.+ +.+.+..+ ..++|+||-+..
T Consensus 52 ~GDat-------~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 52 YGDAT-------RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp ESCTT-------CHHHHHHTTTTTCSEEEECCS
T ss_pred EcCCC-------CHHHHHhcCCCccCEEEECCC
Confidence 99999 55666454 467999998764
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.52 E-value=0.052 Score=51.73 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=31.9
Q ss_pred hcCCcE-EEEec-Cc-----------------chhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKT-ILVSG-VT-----------------GFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~-IlVTG-at-----------------G~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.|++ ||||+ || |-.|.++++.++++| +.|+.+.|...
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G---a~V~lv~g~~s 90 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG---YGVLFLYRARS 90 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEEETTS
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC---CEEEEEecCCC
Confidence 478888 99984 56 889999999999999 55678877654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.054 Score=52.04 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=65.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.|+|.|+|| |.+|..++..|...|+ ..|.+..++++..+. ...+.+.+ . ..+ ...++.+.
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~~~~~~~~~l~~~~---------~-~~~------~~~~i~~t 69 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEGKALDLSHVT---------S-VVD------TNVSVRAE 69 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHHHHHHHHHH---------H-HTT------CCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChhHHHHHHHHHHhhh---------h-ccC------CCCEEEEe
Confidence 478999998 9999999999999885 146777776654322 11111100 0 000 01122211
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-c-----cHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-E-----RYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~-----~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.+. .+.++++|+||-+++...-. . ........|+.-...+.+.+.+.
T Consensus 70 -------------~d~-~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~ 122 (331)
T 1pzg_A 70 -------------YSY-EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 122 (331)
T ss_dssp -------------CSH-HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred -------------CCH-HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 23578999999999764321 2 23445777888889999888886
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.02 Score=53.90 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=33.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.+++++|+|+|+ |.+|++++..|.+.|. .+|++..|+.++.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~~~a 164 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDTSRA 164 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCHHHH
Confidence 367899999997 8999999999999984 3578888876543
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.029 Score=52.46 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=27.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|++++|.|+||+|.+|+.+++.+.+. +++.-|.++.|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 44689999999999999999998764 3432233345553
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.028 Score=54.50 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=30.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|++|+|+|| |.||..++..+...| .+|++..|+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYG---LEVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHT---CEEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence 899999999 999999999888889 5678888876
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.41 E-value=0.039 Score=52.96 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=68.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|.|+|| |.+|..++..|+..+. +..+.++.+..++ ++....++ ... ... ...+.+..
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~~~---~~g~~~dl-------------~~~-~~~-~~~~~i~~ 68 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDK---TKGDAIDL-------------SNA-LPF-TSPKKIYS 68 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHH---HHHHHHHH-------------HTT-GGG-SCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchH---hHHHHHHH-------------HHH-HHh-cCCeEEEE
Confidence 368999998 9999999999988764 3466777653322 22211111 000 000 12333332
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
| +. +.++++|+||..|+...-+ +....++..|+.-...+.+.+.++.+...++.+
T Consensus 69 -~---------~~----~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 69 -A---------EY----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp -C---------CG----GGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred -C---------CH----HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 1 11 3367999999999875432 344567888999999999998886333344433
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.09 Score=50.51 Aligned_cols=118 Identities=14% Similarity=-0.092 Sum_probs=70.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
..++|.|+|+ |.+|..++..|+..|. +..|.++.+.+++ ++....+|. +.. ... ...++..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~---~~g~a~DL~-----~~~----~~~----~~~~i~~- 80 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK---LKGEMMDLE-----HGS----LFL----HTAKIVS- 80 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH---HHHHHHHHH-----HHG----GGS----CCSEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH---HHHHHHHhh-----hhh----hcc----cCCeEEE-
Confidence 4589999998 9999999999998884 2356776554332 222221111 000 000 0112211
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
..|.. . ++++|+||-+||...-+ +...+++..|+.-...+.+.+.+..+...++.+|
T Consensus 81 t~d~~-------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 81 GKDYS-------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp ESSSC-------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cCCHH-------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 22322 1 57899999999976432 3455668889998999999888863333344333
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.022 Score=55.17 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=32.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-.|.+|+|+||+|.||...+..+...| .+|++.+|+.+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~~ 199 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSDE 199 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCHH
Confidence 3467899999999999999999888888 56788887643
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.30 E-value=0.032 Score=53.33 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=65.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|.|+|| |.+|..++..|+..+. +..+.++.+..++ ++....++. ... .. ...+.+..
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~---~~g~~~dl~-------------~~~-~~-~~~~~v~~- 64 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDR---TKGDALDLE-------------DAQ-AF-TAPKKIYS- 64 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHH-------------GGG-GG-SCCCEEEE-
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchH---HHHHHHHHH-------------HHH-Hh-cCCeEEEE-
Confidence 68999998 9999999999988764 3467777654322 222111110 000 00 12333332
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
| +. +.++++|+||.+|+...-+ +....++..|+.-...+.+.+.++.+...++.+
T Consensus 65 ~---------~~----~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 65 G---------EY----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp C---------CG----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred C---------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 1 11 3367999999999875322 233456788999999999998886333344433
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.21 E-value=0.17 Score=46.47 Aligned_cols=38 Identities=16% Similarity=0.096 Sum_probs=29.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+.+++++|+|.|+ |.+|+++++.|...|- .++.+..++
T Consensus 24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gv--g~i~lvD~d 61 (251)
T 1zud_1 24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGV--GTLVLADDD 61 (251)
T ss_dssp HHHHTCEEEEECC-STTHHHHHHHHHHTTC--SEEEEECCC
T ss_pred HHHhcCcEEEEcc-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 4577899999996 5599999999999984 455665443
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.048 Score=51.83 Aligned_cols=116 Identities=11% Similarity=0.062 Sum_probs=65.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.+|..++..|+..|+ ..|.+..+++++. +....++.. ... ... ...++... .
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~--~~v~L~Di~~~~~---~g~~~dl~~-----~~~-~~~------~~~~i~~t-~ 63 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVP---QGKALDLYE-----ASP-IEG------FDVRVTGT-N 63 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSSSHH---HHHHHHHHT-----THH-HHT------CCCCEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEeCCccHH---HHHHHhHHH-----hHh-hcC------CCeEEEEC-C
Confidence 68999998 9999999999988884 1466665554432 221111100 000 000 01122211 1
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS 162 (399)
| . +.++++|+||.+++...-+ .....+...|+.....+.+.+.+. ....++.+.|
T Consensus 64 d------------~--~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 64 N------------Y--ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp C------------G--GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred C------------H--HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 1 1 3367899999999875432 222345677888888999988886 3454544443
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.016 Score=56.52 Aligned_cols=40 Identities=13% Similarity=0.222 Sum_probs=28.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
..|..++|.|.||||++|+.+++.|.+. +. .++..+.++.
T Consensus 12 ~~M~~~kV~IiGAtG~iG~~llr~L~~~-p~-~elvai~~~~ 51 (359)
T 1xyg_A 12 KPEKDIRIGLLGASGYTGAEIVRLLANH-PH-FQVTLMTADR 51 (359)
T ss_dssp ---CCEEEEEECCSSHHHHHHHHHHHTC-SS-EEEEEEBCST
T ss_pred ccccCcEEEEECcCCHHHHHHHHHHHcC-CC-cEEEEEeCch
Confidence 3355579999999999999999999874 34 3566665543
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.036 Score=53.67 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=27.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.++|.|.||||++|+.+++.|.+. +. .++..+.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~-~elv~v~s~~ 39 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PY-LEVKQVTSRR 39 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TT-EEEEEEBCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEECch
Confidence 478999999999999999998764 33 3566665543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.013 Score=60.09 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=27.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.+++++|||| |.+|++++..|++.|. +|++..|+.+
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~---~V~i~~R~~~ 398 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGA---KVVIANRTYE 398 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESSHH
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCHH
Confidence 357889999999 7999999999999995 4577788653
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=94.95 E-value=0.06 Score=51.74 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=32.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+++|+|+||+|.||...+..+...| .+|++.+++.++.
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~~~~~~ 202 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEG---FRPIVTVRRDEQI 202 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESCGGGH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH
Confidence 3799999999999999999888889 5678888876543
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.016 Score=49.41 Aligned_cols=77 Identities=9% Similarity=0.068 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccCCC
Q 015874 21 TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA----ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDISS 96 (399)
Q Consensus 21 tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 96 (399)
+|.++.++++.|.+.|.+ |.+..|+...... .+.+++ .+.++..+.+|+++
T Consensus 25 s~~p~~a~a~~La~~Ga~---vvi~~r~~~e~~~~~~~~~~~~~----------------------~G~~~~~i~~Dv~~ 79 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVD---VVINLMPDSSKDAHPDEGKLVTQ----------------------AGMDYVYIPVDWQN 79 (157)
T ss_dssp EBCCCHHHHHHHHHTTCC---EEEECSCTTSTTSCTTHHHHHHH----------------------TTCEEEECCCCTTS
T ss_pred cCCCCHHHHHHHHHcCCC---EEEECCCcccccccccHHHHHHH----------------------cCCeEEEecCCCCC
Confidence 457889999999999954 4555565433211 111111 13466778899997
Q ss_pred C--CCCCCchhhHHHHhcCccEEEEcccc
Q 015874 97 E--DLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 97 ~--~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
+ +......+.....+.+ |++|||||.
T Consensus 80 ~~~~~v~~~~~~i~~~~G~-dVLVnnAgg 107 (157)
T 3gxh_A 80 PKVEDVEAFFAAMDQHKGK-DVLVHCLAN 107 (157)
T ss_dssp CCHHHHHHHHHHHHHTTTS-CEEEECSBS
T ss_pred CCHHHHHHHHHHHHhcCCC-CEEEECCCC
Confidence 6 3211111222122345 999999986
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.033 Score=52.87 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=58.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.+|..++..|+..|+ +..|.+..+++++. +....++ .... .. .....+...
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~~~~---~~~~~~l-------------~~~~-~~-~~~~~i~~~ 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDEDRA---QAEAEDI-------------AHAA-PV-SHGTRVWHG 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH---HHHHHHH-------------TTSC-CT-TSCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCHHHH---HHHHHhh-------------hhhh-hh-cCCeEEEEC
Confidence 58999998 9999999999998884 23667776654221 1111111 0000 00 011112111
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+ . +.++++|+||.+++.... -+....++..|+.-...+.+.+.+.
T Consensus 61 ----------~---~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (304)
T 2v6b_A 61 ----------G---H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA 106 (304)
T ss_dssp ----------C---G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH
T ss_pred ----------C---H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence 1 1 235789999999976432 2233445678888889999888875
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.019 Score=53.61 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=32.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++++|+|+|+ |.+|+.++..|++.| .+|++..|+.++
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~~~ 154 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTFSK 154 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCHHH
Confidence 57899999997 789999999999999 567888887644
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=94.83 E-value=0.041 Score=52.74 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=30.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|++|+|+|| |.||..++..+...| .+|++..|+.+
T Consensus 162 ~~~g~~VlV~Ga-G~vG~~~~~~a~~~G---a~Vi~~~~~~~ 199 (339)
T 1rjw_A 162 AKPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGDE 199 (339)
T ss_dssp CCTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 346789999999 779999999888888 56788877654
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.021 Score=54.06 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=32.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.+++|+|+|+ |.+|+.++..|++.|. .+|++..|+.++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~~k 177 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTVEK 177 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSHHH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCHHH
Confidence 57899999997 7899999999999884 267888887543
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.012 Score=49.09 Aligned_cols=38 Identities=24% Similarity=0.179 Sum_probs=30.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+++|+|.|+ |.+|+.++..|.+.| .+|.+..|+.++
T Consensus 19 ~~~~~v~iiG~-G~iG~~~a~~l~~~g---~~v~v~~r~~~~ 56 (144)
T 3oj0_A 19 NGGNKILLVGN-GMLASEIAPYFSYPQ---YKVTVAGRNIDH 56 (144)
T ss_dssp HCCCEEEEECC-SHHHHHHGGGCCTTT---CEEEEEESCHHH
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEcCCHHH
Confidence 44899999995 999999999998877 347888786543
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=94.76 E-value=0.11 Score=50.59 Aligned_cols=34 Identities=15% Similarity=0.369 Sum_probs=24.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCC-CcCeEEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFV 46 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~-~V~~v~~~~ 46 (399)
|+|.|.||||++|..|+++|+.+.+ .+.++..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 5899999999999999996666543 123555553
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.031 Score=53.80 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=28.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
|+|.|.||||++|+.+++.|.++++.+..++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~ 33 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLY 33 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEe
Confidence 579999999999999999999877777666554
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=94.66 E-value=0.05 Score=52.25 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=29.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
-.|.+|||+||+|.||...+..+...| .+|++. ++.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G---a~Vi~~-~~~ 184 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARG---ARVFAT-ARG 184 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEE-ECH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEE-eCH
Confidence 467899999999999999999888889 456776 543
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.32 Score=45.99 Aligned_cols=116 Identities=17% Similarity=0.096 Sum_probs=67.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|+ |.+|..++..|...+. .+.|.+..|+++..+.. ..++.. .. . ... ...++...
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~~~~~---~~~l~~-~~----~-~~~------~~~~i~~t-- 61 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQGK---ALDMYE-SG----P-VGL------FDTKVTGS-- 61 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHHH---HHHHHT-TH----H-HHT------CCCEEEEE--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHHH---HHhHHh-hh----h-ccc------CCcEEEEC--
Confidence 58999998 9999999999888521 25678888876543221 111100 00 0 000 01111111
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
+ + . .. ++++|+||-+++....+ .....++..|+.-...+.+.+.+..+...++.+
T Consensus 62 --~-------d--~-~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~ 117 (310)
T 1guz_A 62 --N-------D--Y-AD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117 (310)
T ss_dssp --S-------C--G-GG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred --C-------C--H-HH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1 1 1 12 57899999999764322 234566778888888999888876233344443
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.062 Score=52.18 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=32.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++++|+|+|+ |.+|..++..+...| .+|++..|+.++
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~G---a~V~v~dr~~~r 202 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLG---AQVQIFDINVER 202 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCHHH
Confidence 56789999998 999999999999999 467888887543
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=94.51 E-value=0.22 Score=47.34 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=64.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|+|+ |.+|..++..|+..+. +..|....++++.. +....++ .+ .. ......+.+.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~~~---~~~~~dl-----~~----~~-----~~~~~~~~i~ 65 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKA---IGDAMDF-----NH----GK-----VFAPKPVDIW 65 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHH---HHHHHHH-----HH----HT-----TSSSSCCEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcchH---HHHHhhH-----HH----Hh-----hhcCCCeEEE
Confidence 3478999998 9999999999988764 34677776654321 1111111 00 00 0011123332
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
. | +. ..++++|+||-+++....+ ......+..|..-...+.+.+.+.
T Consensus 66 ~-~---------~~----~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 66 H-G---------DY----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp E-C---------CG----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred c-C---------cH----HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 1 1 11 2367999999999875432 222445677888888888888875
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.35 Score=45.55 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=30.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.+++.+|+|.| .|.+|+.++..|.+.|- -++.+..++.
T Consensus 32 ~kL~~~~VlVvG-aGGlGs~va~~La~aGV--G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVG-VGGVGSVTAEMLTRCGI--GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred HHHhCCeEEEEC-cCHHHHHHHHHHHHcCC--CEEEEECCCc
Confidence 456778999998 57799999999999983 4556555443
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.15 Score=49.82 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=25.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCC-CcCeEEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQP-NVKKLYLFV 46 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~-~V~~v~~~~ 46 (399)
.++|.|.||||++|..|+++|+.+.+ .+.++..+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 46899999999999999996666543 133555553
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=94.39 E-value=0.17 Score=48.69 Aligned_cols=35 Identities=17% Similarity=0.405 Sum_probs=27.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
++|.|.||||++|..|++.|.+ .++ ..+..+.++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~-~p~-~el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR-HPH-MNITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTT-EEEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHh-CCC-CcEEEEEecC
Confidence 6899999999999999998776 344 3566665444
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.23 Score=47.25 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=63.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|+ |.+|..++..|+..|+ +..|.+..|+++.. +.....+. + ... . ........
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~~---~~~~~~l~-----~----~~~-----~-~~~~~i~~- 59 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRA---EGDALDLI-----H----GTP-----F-TRRANIYA- 59 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHH---HHHHHHHH-----H----HGG-----G-SCCCEEEE-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHHHHH-----h----hhh-----h-cCCcEEEe-
Confidence 58999998 9999999999999995 23677777764322 22111110 0 000 0 01111111
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+ +. ..++++|+||-+++....+ .....+...|+.-...+++.+.+.
T Consensus 60 --~-------d~----~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 60 --G-------DY----ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp --C-------CG----GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C-------CH----HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 11 2357899999998865432 234456777888888898888775
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.089 Score=49.01 Aligned_cols=34 Identities=24% Similarity=0.227 Sum_probs=29.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|+|.|.|+||.+|+.++..|.+.| +.|.+..|+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA---HHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS---SEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 699999999999999999999999 4567776654
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.22 E-value=0.019 Score=53.99 Aligned_cols=36 Identities=17% Similarity=0.303 Sum_probs=29.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++++|+|||++ .+|++++..|++.| + |++..|+.+
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~---V~v~~r~~~ 161 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-N---IIIANRTVE 161 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-E---EEEECSSHH
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-C---EEEEECCHH
Confidence 578999999985 99999999999988 4 466777643
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.37 Score=45.38 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=63.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.|+|.|.|+ |.+|..++..|...|+- ..|.+..|+.+.... ..++.+ +..+ . ......
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~-~~V~l~d~~~~~~~~~~~~~~~---------------~~~~---~-~~~~v~ 65 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIA-REIVLEDIAKERVEAEVLDMQH---------------GSSF---Y-PTVSID 65 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHHH---------------TGGG---S-TTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChhHHHHHHHHHHh---------------hhhh---c-CCeEEE
Confidence 479999998 99999999999998841 266777776422210 000000 0000 0 011111
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.. + +. ....++|+||-+++....+ +....++..|+.....+++.+.+.
T Consensus 66 ~~--~-------~~----~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 66 GS--D-------DP----EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp EE--S-------CG----GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eC--C-------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 0 11 2346899999999764332 445566778888888888888775
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=94.05 E-value=0.11 Score=49.61 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=50.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|+|.|+ |-+|+.+++.|.+.| + |.++.++++.. + .. ..++.++.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g---~-v~vid~~~~~~---~-~~------------------------~~~~~~i~ 161 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENVRK---K-VL------------------------RSGANFVH 161 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSC---E-EEEESCGGGHH---H-HH------------------------HTTCEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCC---c-EEEEeCChhhh---h-HH------------------------hCCcEEEE
Confidence 357999996 999999999999988 4 56665554332 2 22 15788999
Q ss_pred ccCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 92 GDISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
||.+ +.+.+++. .+++|.|+-+.+
T Consensus 162 gd~~-------~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 162 GDPT-------RVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp SCTT-------SHHHHHHTCSTTEEEEEECCS
T ss_pred eCCC-------CHHHHHhcChhhccEEEEcCC
Confidence 9999 55555454 568999997654
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=93.96 E-value=0.06 Score=49.50 Aligned_cols=42 Identities=17% Similarity=0.344 Sum_probs=30.4
Q ss_pred cHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 5 SVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 5 ~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.|...+.+|+|.|.|+ |.+|+.++..|.+.|+++ |.+..|+.
T Consensus 3 ~m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~--v~~~~~~~ 44 (266)
T 3d1l_A 3 AMKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRI--VQVYSRTE 44 (266)
T ss_dssp ----CGGGCCEEEECC-SHHHHHHHHHHHHHTCCE--EEEECSSH
T ss_pred hhhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeE--EEEEeCCH
Confidence 3444556789999995 999999999999999541 56666654
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.12 Score=49.62 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=31.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+|.+|+|+||+|.||...+..+...| .+|++.+++.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~~ 186 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRNE 186 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 78999999999999999998888888 56788877554
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=93.81 E-value=0.6 Score=44.12 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=62.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+....++|.|+|| |.+|..++..|+..|. +..|....++++.......+.. . ...++
T Consensus 10 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~g~a~dl~~--------------~-------~~~~i 66 (303)
T 2i6t_A 10 ENKTVNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTKGATMDLEI--------------F-------NLPNV 66 (303)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC-----CHHHHHH--------------H-------TCTTE
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchHHHHHHHhh--------------h-------cCCCe
Confidence 3444578999996 9999999999999885 2466777665531111111110 0 01233
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
... .|. +.++++|+||-.|+....-+....++..|+.-...+.+.+.+.
T Consensus 67 ~~t-~d~--------------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 67 EIS-KDL--------------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp EEE-SCG--------------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe-CCH--------------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 331 221 2367999999999874322344566778888888898888875
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.061 Score=53.58 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=31.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-.|.+|+|+||+|.||...+..+...| .+|++.+++.+
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~~~~ 256 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVSSAQ 256 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence 4567899999999999999998888889 55677776543
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=93.77 E-value=0.35 Score=45.60 Aligned_cols=106 Identities=10% Similarity=0.036 Sum_probs=61.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+| +|.+|..++..|++.|. .+.|.+..|+.+.. +.+..++.. .. ......+.....
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~~---~~~~~~l~~-----------~~---~~~~~~~~~~~~ 62 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAKV---KADQIDFQD-----------AM---ANLEAHGNIVIN 62 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHHH---HHHHHHHHH-----------HG---GGSSSCCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHHH---HHHHHHHHh-----------hh---hhcCCCeEEEeC
Confidence 6899999 89999999999999884 34567777764322 222211100 00 000112222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
| . ..++++|+||-+++.... ......++..|+.-...+++.+.+.
T Consensus 63 d----------~----~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 63 D----------W----AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp C----------G----GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred C----------H----HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 235689999999876431 1222334667887788888888775
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=93.75 E-value=0.17 Score=50.84 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=60.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhC-CCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g-~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
++|+|.| .|.||+.+++.|+++. ..+..|.+...........+. .++.+..
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~---------------------------~g~~~~~ 65 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQ---------------------------YGVSFKL 65 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHH---------------------------HTCEEEE
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhh---------------------------cCCceeE
Confidence 6799999 9999999999998874 222356666544433222211 1345555
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
.+++..+ ..+.+..++++.|+|||++-.. ....++++|.+. .+.|++++.
T Consensus 66 ~~Vdadn----v~~~l~aLl~~~DvVIN~s~~~---------------~~l~Im~aclea----Gv~YlDTa~ 115 (480)
T 2ph5_A 66 QQITPQN----YLEVIGSTLEENDFLIDVSIGI---------------SSLALIILCNQK----GALYINAAT 115 (480)
T ss_dssp CCCCTTT----HHHHTGGGCCTTCEEEECCSSS---------------CHHHHHHHHHHH----TCEEEESSC
T ss_pred Eeccchh----HHHHHHHHhcCCCEEEECCccc---------------cCHHHHHHHHHc----CCCEEECCC
Confidence 5655311 1122324555569999865331 133578888886 356777763
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.74 E-value=0.16 Score=49.17 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=29.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.-+|.+|+|+||+|.||...+..+...| .+|++.++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~~ 216 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD---AHVTAVCS 216 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 4467899999999999999998888888 45666664
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.057 Score=50.58 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=32.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+++++|+|+|+ |.+|++++..|.+.|. .+|++..|+.++.
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~~a 154 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMSRF 154 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGGGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHHHH
Confidence 56899999996 8899999999999995 2457888876543
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=93.72 E-value=0.14 Score=49.81 Aligned_cols=36 Identities=14% Similarity=0.331 Sum_probs=27.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~ 48 (399)
++|.|.||||++|+.+++.|+.+ ++.+..++.+..+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 68999999999999999966554 3345567776554
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=93.66 E-value=0.53 Score=45.34 Aligned_cols=118 Identities=11% Similarity=0.058 Sum_probs=67.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc----------------cHHHHHHHHHhhhhhHHHH
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID----------------SAALRFQNEVLAKDVFNVL 71 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~----------------~~~~~~~~~l~~~~~~~~~ 71 (399)
+.+.+.+|+|.| .|.+|+.+++.|+..|- ..+++...+.-.. ..++-..+. +
T Consensus 32 ~~L~~~~VlivG-~GGlG~~ia~~La~~Gv--g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~---------l 99 (346)
T 1y8q_A 32 KRLRASRVLLVG-LKGLGAEIAKNLILAGV--KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLER---------A 99 (346)
T ss_dssp HHHHTCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHH---------H
T ss_pred HHHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHH---------H
Confidence 456788999999 56799999999999993 4556553221000 011111111 1
Q ss_pred HhhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 72 ~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.+. ...-+++.+..++.+ ....++.++|+||.+... ...-..+-++|.+.
T Consensus 100 ~~l-------np~v~v~~~~~~~~~---------~~~~~~~~~dvVv~~~d~--------------~~~r~~ln~~~~~~ 149 (346)
T 1y8q_A 100 QNL-------NPMVDVKVDTEDIEK---------KPESFFTQFDAVCLTCCS--------------RDVIVKVDQICHKN 149 (346)
T ss_dssp HHT-------CTTSEEEEECSCGGG---------CCHHHHTTCSEEEEESCC--------------HHHHHHHHHHHHHT
T ss_pred HhH-------CCCeEEEEEecccCc---------chHHHhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc
Confidence 111 012355666665542 123567899999987432 22233455566663
Q ss_pred cCCceEEEEecceeecCc
Q 015874 152 VKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~ 169 (399)
...+|..++.+.+|.-
T Consensus 150 --~ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 150 --SIKFFTGDVFGYHGYT 165 (346)
T ss_dssp --TCEEEEEEEEBTEEEE
T ss_pred --CCCEEEEeecccEEEE
Confidence 4678888777777643
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=93.66 E-value=0.17 Score=48.11 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=66.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|+|.|.|+ |.+|..++..|+..|+ ..|.+..++++..+. ...++.. .. .... ...++...
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~~~~---~~~~l~~-----~~-~~~~------~~~~i~~t- 64 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGIPQG---KALDITH-----SM-VMFG------STSKVIGT- 64 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHH---HHHHHHH-----HH-HHHT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchHHHH---HHHHHHh-----hh-hhcC------CCcEEEEC-
Confidence 478999997 9999999999999984 156777776643322 1101100 00 0000 01122211
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
. +. ..++++|+||-+++....+ ....+.+..|......+++.+.+..+...++.+|
T Consensus 65 ~----------d~----~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s 121 (317)
T 2ewd_A 65 D----------DY----ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT 121 (317)
T ss_dssp S----------CG----GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred C----------CH----HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 1 11 2357899999999765322 2233445667777788888887753323344333
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.038 Score=49.47 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=28.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+|+|.|+| +|.+|+.++..|.+.|+ +|.+..|+.
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~---~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGF---KVVVGSRNP 61 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTC---CEEEEESSH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 357899999 89999999999999995 457777764
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=93.60 E-value=0.14 Score=48.93 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=62.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|.|+|| |.+|..++..|+..|. ..|.+..+++++.+ .....+.. .+. ... ...++...
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~--~~v~L~Di~~~~l~---~~~~~l~~-----~~~-~~~------~~~~i~~t- 64 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVKNMPH---GKALDTSH-----TNV-MAY------SNCKVSGS- 64 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSHHH---HHHHHHHT-----HHH-HHT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCHHHHH---HHHHHHHh-----hhh-hcC------CCcEEEEC-
Confidence 468999998 9999999999998885 14666666554332 21111100 000 000 01122211
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-cc-----HHHHHHHhHHHHHHHHHHHHhc
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ER-----YDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~-----~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.| . +.++++|+||-+++...-. .. ...+...|+.-...+.+.+.+.
T Consensus 65 ~d------------~--~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~ 116 (322)
T 1t2d_A 65 NT------------Y--DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 116 (322)
T ss_dssp CC------------G--GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CC------------H--HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 3367999999999764321 11 2344677888888888888775
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=93.51 E-value=0.072 Score=49.98 Aligned_cols=39 Identities=28% Similarity=0.370 Sum_probs=32.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++++|+|+|+ |.+|+.++..|.+.|. .+|++..|+.++
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~~ 162 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTFAK 162 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSHHH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCHHH
Confidence 57899999997 7899999999999884 367888887644
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.52 Score=43.15 Aligned_cols=77 Identities=18% Similarity=0.143 Sum_probs=46.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|.|.|++|-+|+.+++.+.+. + ..+.+...+.+.... .. ..+.. +.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~---~elva~~d~~~dl~~---~~------------------------~~~~D-vv 49 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD---LTLSAELDAGDPLSL---LT------------------------DGNTE-VV 49 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT---CEEEEEECTTCCTHH---HH------------------------HTTCC-EE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEccCCCHHH---Hh------------------------ccCCc-EE
Confidence 58999999999999999998765 5 455555544322111 10 01222 56
Q ss_pred ccCCCCCCCCCchhhHHH-HhcCccEEEEcccc
Q 015874 92 GDISSEDLGLKDSNLKEE-LWNELDIMVNSAAI 123 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~-~~~~~D~Vih~Aa~ 123 (399)
.|++.++. ..+.... +..++++|+-..|.
T Consensus 50 IDfT~p~a---~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 50 IDFTHPDV---VMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EECSCTTT---HHHHHHHHHHTTCEEEECCCCC
T ss_pred EEccChHH---HHHHHHHHHHcCCCEEEcCCCC
Confidence 78887764 3333323 33478888876653
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=93.46 E-value=0.62 Score=44.09 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=68.1
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|.|+|| |.+|..++..|+..+. ..|....+..++... ...++.. ... . ......+...
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~~g---~~~dl~~-----~~~-~--------~~~~~~i~~t- 59 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKPQG---EALDLAH-----AAA-E--------LGVDIRISGS- 59 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHHHH---HHHHHHH-----HHH-H--------HTCCCCEEEE-
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhHHH---HHHHHHH-----hhh-h--------cCCCeEEEEC-
Confidence 4889998 9999999999988774 356777776544321 1111100 000 0 0012112110
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
. + . +.++++|+||-.|+...-+ .....+...|+.-...+.+.+.+..+...++.+
T Consensus 60 -~-------d--~--~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (308)
T 2d4a_B 60 -N-------S--Y--EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVIT 115 (308)
T ss_dssp -S-------C--G--GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -C-------C--H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 1 1 1 2467999999999875432 344566888999999999988875233344444
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=93.39 E-value=0.081 Score=51.06 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=33.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.-.|.+|+|+|+ |.+|...+..+...| .+|++..|++.+.
T Consensus 177 ~~~g~~VlV~Ga-G~vG~~~~qlak~~G---a~Vi~~~~~~~~~ 216 (360)
T 1piw_A 177 CGPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKR 216 (360)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCHHHH
Confidence 346789999999 999999998887788 5678888887654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.33 E-value=0.15 Score=47.54 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=32.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+++++++|+|+ |.+|+.++..|.+.|. .+|++..|+.++
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~~~ 156 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDMAK 156 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCHHH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCHHH
Confidence 56899999997 7899999999999884 367888887543
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=93.32 E-value=0.14 Score=49.57 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=30.8
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.|.+|+|+|+ |.||...+..+...| .+|++..++.++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~~~ 223 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFG---SKVTVISTSPSK 223 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 7889999996 999999998888888 567888877644
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=93.08 E-value=0.11 Score=49.92 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=30.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.|.+|+|+|| |.+|...+..+...|. .+|++..|+.+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~~ 203 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSDF 203 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCHH
Confidence 7889999999 9999999988888884 15678777643
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=92.96 E-value=0.16 Score=50.69 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=31.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-.|.+|+|+||+|.||...+..+...| .+|++.+++..
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~~~ 264 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGG---ANPICVVSSPQ 264 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECCHH
Confidence 3567899999999999999998888888 55677776543
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=92.91 E-value=0.64 Score=44.91 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=31.9
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
-+.+++.+|+|.|+ |.+|+.++..|+..|- -++.+..++.
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aGv--g~i~lvD~D~ 152 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSGI--GEIILIDNDQ 152 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEECCB
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCCC--CeEEEECCCc
Confidence 35577899999996 7799999999999993 5677776653
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=92.75 E-value=0.082 Score=52.67 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=28.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.|.| +|++|..++..|.+.| +.|.+..|+++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G---~~V~~~d~~~~ 34 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVSST 34 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEECCHH
Confidence 5799998 8999999999999999 45677776543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=92.71 E-value=0.13 Score=50.30 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=32.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.+++|+|+|+ |-||..+++.+...| .+|.+..|+.+
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~G---a~V~~~d~~~~ 202 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMG---ATVTVLDINID 202 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCHH
Confidence 367899999998 999999999999989 46688777653
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=92.64 E-value=0.37 Score=50.28 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=69.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHH---HHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRF---QNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.+.+.+|+|.|+ |.+|+.+++.|+..|- -++++.....-..+-+.|. ...-..+..-..+++..... ...
T Consensus 13 ~kL~~s~VlVVGa-GGLGsevak~La~aGV--G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i---NP~ 86 (640)
T 1y8q_B 13 EAVAGGRVLVVGA-GGIGCELLKNLVLTGF--SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF---YPK 86 (640)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT---CTT
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHcCC--CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH---CCC
Confidence 5567789999995 7799999999999994 4566665543221111110 00000001111111111110 112
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecce
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAY 164 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~ 164 (399)
-+++.+..+++.. +....++.++|+||.+... +..-..+-++|... .+.+|+.++.+
T Consensus 87 v~V~a~~~~i~~~-------~~~~~~~~~~DlVvda~Dn--------------~~aR~~ln~~c~~~--~iPlI~~g~~G 143 (640)
T 1y8q_B 87 ANIVAYHDSIMNP-------DYNVEFFRQFILVMNALDN--------------RAARNHVNRMCLAA--DVPLIESGTAG 143 (640)
T ss_dssp CEEEEEESCTTST-------TSCHHHHTTCSEEEECCSC--------------HHHHHHHHHHHHHH--TCCEEEEEEET
T ss_pred CeEEEEecccchh-------hhhHhhhcCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEEEec
Confidence 4667777777632 2223567899999997432 22223344555553 34577766655
Q ss_pred eec
Q 015874 165 VAG 167 (399)
Q Consensus 165 v~~ 167 (399)
.+|
T Consensus 144 ~~G 146 (640)
T 1y8q_B 144 YLG 146 (640)
T ss_dssp TEE
T ss_pred ccc
Confidence 444
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=92.54 E-value=0.25 Score=47.25 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=62.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
.++|.|+|| |.+|..++..|+..|+ ..|.+..++++..+.. ..+.+.. . ... ...++...
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~--~~V~L~Di~~~~l~~~~~~l~~~~---------~-~~~------~~~~i~~t 74 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDL--GDVYMFDIIEGVPQGKALDLNHCM---------A-LIG------SPAKIFGE 74 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSTTHHHHHHHHHHHHH---------H-HHT------CCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhHh---------h-ccC------CCCEEEEC
Confidence 368999998 9999999999998885 1467777766543321 1111100 0 000 01222221
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
.| . +.++++|+||-+++...- ......+...|+.-...+.+.+.+.
T Consensus 75 -~d------------~--~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~ 121 (328)
T 2hjr_A 75 -NN------------Y--EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY 121 (328)
T ss_dssp -SC------------G--GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred -CC------------H--HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHH
Confidence 11 1 335789999999975431 1122234667888888888888775
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=0.25 Score=47.90 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=25.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++|.|.||||++|..|++.|.+ .+.+ ++..+..+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S~ 41 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAGK 41 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEES
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEECc
Confidence 46899999999999999995544 4543 55555443
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=0.25 Score=47.90 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=25.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++|.|.||||++|..|++.|.+ .+.+ ++..+..+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S~ 41 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAGK 41 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEES
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEECc
Confidence 46899999999999999995544 4543 55555443
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=92.37 E-value=0.29 Score=45.96 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=31.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.|++|+|.|+ |-||+.+++.|...| .+|.+..|+.
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G---~~V~~~d~~~ 190 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALG---ANVKVGARSS 190 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 367899999995 999999999999989 4668877764
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.12 Score=51.89 Aligned_cols=35 Identities=17% Similarity=0.159 Sum_probs=29.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
|+|.|.| +|++|..++..|.+.| +.|.+..|++++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G---~~V~~~D~~~~~ 37 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELG---ANVRCIDTDRNK 37 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHHH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcC---CEEEEEECCHHH
Confidence 6899998 6999999999999999 556888776543
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=92.27 E-value=0.2 Score=49.41 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=32.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+.|++|+|.|+ |.+|+.+++.|...|. .+|++..|+..
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~~ 202 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTYE 202 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSHH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 68999999997 9999999999999894 26788877653
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=92.16 E-value=0.49 Score=45.37 Aligned_cols=39 Identities=13% Similarity=-0.049 Sum_probs=31.8
Q ss_pred cCC-cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LEN-KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~-~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
-.| .+|+|+||+|.+|...+..+...| .++++.+++.++
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~~ 204 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPN 204 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTT
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCccc
Confidence 457 899999999999999888777778 566788776654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=92.08 E-value=0.34 Score=46.57 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=27.4
Q ss_pred cEEEEecCcchhHHHH-HHHH-HHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVF-IEKI-LRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l-~~~L-l~~g~~V~~v~~~~R~~~ 50 (399)
.+|+|+|| |.+|... +..+ ...|.+ +|++.+++.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~--~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYE--NLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCC--EEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCc--EEEEEeCCcc
Confidence 89999999 9999988 7655 456732 3788888776
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=91.99 E-value=0.25 Score=47.49 Aligned_cols=40 Identities=10% Similarity=0.038 Sum_probs=30.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-.|.+|||+|+ |.+|...+..+...|.+ .|.+..+++++
T Consensus 177 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--~Vi~~~~~~~~ 216 (363)
T 3m6i_A 177 VRLGDPVLICGA-GPIGLITMLCAKAAGAC--PLVITDIDEGR 216 (363)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCC--SEEEEESCHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEECCCHHH
Confidence 456889999998 99999999888778853 26777666543
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=91.97 E-value=0.33 Score=46.78 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=31.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-.|.+|+|+| +|.+|...+..+...| .+|++..++.++
T Consensus 187 ~~~g~~VlV~G-~G~vG~~a~qla~~~G---a~Vi~~~~~~~~ 225 (363)
T 3uog_A 187 LRAGDRVVVQG-TGGVALFGLQIAKATG---AEVIVTSSSREK 225 (363)
T ss_dssp CCTTCEEEEES-SBHHHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEecCchh
Confidence 34678999999 8999999998888888 567888776543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=91.93 E-value=0.29 Score=45.83 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=29.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
.++|++++|.|++|.+|+.++..|++.|. +|++.
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA---tVtv~ 190 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGA---TVSVC 190 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEE
Confidence 36899999999999999999999999984 44554
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=91.84 E-value=0.16 Score=49.35 Aligned_cols=40 Identities=15% Similarity=0.113 Sum_probs=31.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.-.|.+|||+|+ |.+|...+..+...| .+|++..+++++.
T Consensus 192 ~~~g~~VlV~Ga-G~vG~~aiqlak~~G---a~Vi~~~~~~~~~ 231 (369)
T 1uuf_A 192 AGPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAKR 231 (369)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGGH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHHH
Confidence 346789999998 789999988877778 5578888776543
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=91.75 E-value=0.14 Score=51.41 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=51.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.|+|+|.| .|-+|++|++.|.++| +.|.+..++++. .+++.+. ..+..+
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~---~~v~vId~d~~~---~~~~~~~-----------------------~~~~~i 51 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGEN---NDITIVDKDGDR---LRELQDK-----------------------YDLRVV 51 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTT---EEEEEEESCHHH---HHHHHHH-----------------------SSCEEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCC---CCEEEEECCHHH---HHHHHHh-----------------------cCcEEE
Confidence 458999998 5899999999999999 445666554432 2333221 367789
Q ss_pred eccCCCCCCCCCchhhHHHH-hcCccEEEEcc
Q 015874 91 PGDISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~-~~~~D~Vih~A 121 (399)
.||-+ +.+.++++ .+++|++|-+.
T Consensus 52 ~Gd~~-------~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 52 NGHAS-------HPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp ESCTT-------CHHHHHHHTTTTCSEEEECC
T ss_pred EEcCC-------CHHHHHhcCCCcCCEEEEEc
Confidence 99999 45555444 35799988643
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=91.74 E-value=0.18 Score=48.83 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=26.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
.++|.|.||||++|+.+++.|.+. +. .++.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~-~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH-PY-LELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC-SS-EEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC-CC-cEEEEEe
Confidence 478999999999999999988753 44 3566665
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=91.65 E-value=0.6 Score=43.70 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=28.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
++|.|.||+|.+|..++..|.+.|++ |.+..|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~---V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYP---ISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCC---EEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCe---EEEEECCc
Confidence 58999999999999999999999954 46665543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=91.62 E-value=0.18 Score=47.85 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=31.6
Q ss_pred CCc-EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 11 ENK-TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 11 ~~~-~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.|. +|+|+||+|.+|...+..+...| .+|++.++++++.
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~~ 187 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEH 187 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCH
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH
Confidence 444 89999999999999998888888 4568888876554
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=91.59 E-value=0.12 Score=48.90 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=30.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
..-+|.+|+|+||+|.+|...+..+...| .+|++.+++
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~~~ 186 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKG---TTVITTASK 186 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEECH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEecc
Confidence 34578899999999999999998888888 456666644
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=91.58 E-value=0.16 Score=49.66 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=25.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
-|..++|.|.||||++|..|++.|.+ .+. .++..+
T Consensus 16 ~M~~~kVaIvGAtG~vG~ell~lL~~-hp~-~el~~l 50 (381)
T 3hsk_A 16 HMSVKKAGVLGATGSVGQRFILLLSK-HPE-FEIHAL 50 (381)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTT-CSS-EEEEEE
T ss_pred cCCccEEEEECCCChHHHHHHHHHHc-CCC-ceEEEe
Confidence 35557899999999999999996654 444 355544
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.41 Score=44.77 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=31.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.|++|+|.| .|-||+.+++.|...| .+|.+..|+.
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G---~~V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALG---AKVKVGARES 188 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCC---CEEEEEECCH
Confidence 36789999999 6999999999999988 4667777764
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=91.56 E-value=0.5 Score=45.66 Aligned_cols=34 Identities=15% Similarity=-0.038 Sum_probs=28.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
..|.+|+|+||+|.+|...+..+...|. +|++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga---~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY---IPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEe
Confidence 5678999999999999999988888884 556665
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=91.28 E-value=0.55 Score=45.15 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=31.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.||+|.|.| .|-||+.+++.|...| .+|....|+..
T Consensus 168 ~l~gktiGIIG-lG~IG~~vA~~l~~~G---~~V~~~dr~~~ 205 (340)
T 4dgs_A 168 SPKGKRIGVLG-LGQIGRALASRAEAFG---MSVRYWNRSTL 205 (340)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSCC
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEcCCcc
Confidence 47789999998 6999999999999888 45677766543
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=91.27 E-value=0.35 Score=46.02 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=30.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-.|.+|+|+|+ |.+|...+..+...| .+|++..++.++
T Consensus 164 ~~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~ 202 (340)
T 3s2e_A 164 TRPGQWVVISGI-GGLGHVAVQYARAMG---LRVAAVDIDDAK 202 (340)
T ss_dssp CCTTSEEEEECC-STTHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCHHH
Confidence 356789999997 889999998888888 567888776543
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.56 Score=45.75 Aligned_cols=38 Identities=21% Similarity=0.157 Sum_probs=31.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.+++|+|+|+ |-+|...++.+...| .+|.+..|+..+
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~G---a~V~~~d~~~~~ 207 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLG---AVVMATDVRAAT 207 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCSTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 57899999995 999999999999989 457888777654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=91.14 E-value=0.4 Score=45.89 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=29.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|.+|+|+|+ |.+|...+..+...| .+|++..++++
T Consensus 166 ~~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~ 203 (352)
T 1e3j_A 166 VQLGTTVLVIGA-GPIGLVSVLAAKAYG---AFVVCTARSPR 203 (352)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEcCCHH
Confidence 456889999997 999999988877778 45677776654
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=91.02 E-value=0.52 Score=44.67 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=30.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
..+|+|.|.| .|.+|..++..|++.| +.|.+..|+.+
T Consensus 29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G---~~V~~~dr~~~ 65 (320)
T 4dll_A 29 PYARKITFLG-TGSMGLPMARRLCEAG---YALQVWNRTPA 65 (320)
T ss_dssp CCCSEEEEEC-CTTTHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHhCC---CeEEEEcCCHH
Confidence 3457999997 6999999999999999 45677777654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=90.83 E-value=0.3 Score=46.74 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=32.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.-.|.+|+|+|+ |.+|...+..+...| .+|++..+++++.
T Consensus 174 ~~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~~~ 213 (348)
T 3two_A 174 VTKGTKVGVAGF-GGLGSMAVKYAVAMG---AEVSVFARNEHKK 213 (348)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHTT---CEEEEECSSSTTH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCC---CeEEEEeCCHHHH
Confidence 356889999997 999999888887778 5678888877654
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=90.79 E-value=0.56 Score=43.60 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=32.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|+|.|.|+ |.+|+.++..|++.|+....|.+..|+.+.
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~ 41 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDK 41 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHH
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHH
Confidence 4578999985 999999999999999644467888777643
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=90.76 E-value=0.39 Score=46.16 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=30.7
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+|.+|+|+|+ |.+|...+..+...| .+|++..++.++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~G---a~Vi~~~~~~~~ 216 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMG---HHVTVISSSNKK 216 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSTTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCChHH
Confidence 7889999995 999999998887788 567888887654
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=90.69 E-value=0.27 Score=47.61 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=26.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
.+.+|.|.||||++|..|++.|.+. +. .++..+.
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~-~el~~l~ 45 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNH-PE-AKITYLS 45 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHC-TT-EEEEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEe
Confidence 4468999999999999999998864 44 3566654
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=90.49 E-value=0.5 Score=44.25 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=28.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
++|++++|.|++|.+|+.++..|+..|. .|++.
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~ 191 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKA---TVTTC 191 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEE
Confidence 7899999999999999999999999984 44554
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=90.38 E-value=0.74 Score=42.29 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=27.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|+|.|.| +|.+|+.++..|.+.|+ +|.+..|+.
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~~g~---~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLRRRGH---YLIGVSRQQ 33 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5899999 79999999999999994 567776654
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=90.33 E-value=1 Score=41.80 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=29.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++|.|.| +|.+|+.++..|++.| +.|.+..|+.+.
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G---~~V~l~d~~~~~ 39 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHG---FAVTAYDINTDA 39 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCC---CeEEEEeCCHHH
Confidence 46899998 5999999999999999 456777776543
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=90.31 E-value=0.11 Score=49.83 Aligned_cols=37 Identities=11% Similarity=0.136 Sum_probs=30.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.|.+|+|+|| |.+|...+..+...|. .+|++..|+.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~~ 200 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNPY 200 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCHH
Confidence 7889999999 9999999988887884 15688877643
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=90.26 E-value=0.18 Score=46.80 Aligned_cols=36 Identities=28% Similarity=0.520 Sum_probs=30.3
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.+++|+|.|+ |.+|+.++..|.+.|. .|++..|+.
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~---~V~v~~r~~ 162 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGA---KVFLWNRTK 162 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTC---EEEEECSSH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCC---EEEEEECCH
Confidence 56799999995 8999999999999993 667777764
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=90.23 E-value=0.37 Score=47.11 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=31.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++.+|+|+|+ |-+|...++.+...| .+|.++.|+..+
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lG---a~V~v~D~~~~~ 219 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLG---AKTTGYDVRPEV 219 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHT---CEEEEECSSGGG
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCC---CEEEEEeCCHHH
Confidence 46789999996 999999999999999 566888777654
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=90.15 E-value=0.55 Score=43.98 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=28.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
++|++|+|.|++|.+|+.++..|+..|. +|++.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA---tVtv~ 191 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGC---TVTVT 191 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTC---EEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEE
Confidence 6899999999999999999999999984 44554
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=90.15 E-value=0.64 Score=43.63 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=26.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++|.|.|++|-+|+.+++.+.+. +++.-|-++.|+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~ 56 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRK 56 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 368999999999999999988763 443334444554
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=89.96 E-value=0.28 Score=46.18 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=29.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
...|+|.|.| .|.+|..+++.|++.|++ |.+..|+.+
T Consensus 7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~---V~~~dr~~~ 43 (306)
T 3l6d_A 7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKR---VAIWNRSPG 43 (306)
T ss_dssp CCSCSEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSHH
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 3457899997 899999999999999954 577767654
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=89.96 E-value=0.5 Score=45.30 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=30.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
-.|.+|||+||+|.+|...+..+...| .++++.+++..
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~G---a~vi~~~~~~~ 203 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALG---LRTINVVRDRP 203 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEECCCS
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcC---CEEEEEecCcc
Confidence 467899999999999999888777778 45677776643
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=89.93 E-value=0.9 Score=43.01 Aligned_cols=37 Identities=22% Similarity=0.432 Sum_probs=30.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.|+|.|.| .|.+|..++..|.+.|+. ..|.+..|+.+
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~~-~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINPE 69 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCHH
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCC-CEEEEEECCHH
Confidence 37899999 899999999999999962 26677766653
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=89.89 E-value=1.1 Score=43.03 Aligned_cols=38 Identities=13% Similarity=0.293 Sum_probs=30.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+.+++++|+|.| .|.+|+++++.|+..|- -+++.+.++
T Consensus 30 ~kL~~~~VlIvG-aGGlGs~va~~La~aGV--g~ItlvD~D 67 (340)
T 3rui_A 30 DIIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNG 67 (340)
T ss_dssp HHHHTCEEEEEC-CSHHHHHHHHHHHHTTC--CEEEEECCC
T ss_pred HHHhCCEEEEEC-CCHHHHHHHHHHHHcCC--CEEEEecCC
Confidence 457789999998 57799999999999883 456666554
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=89.88 E-value=0.97 Score=42.18 Aligned_cols=37 Identities=5% Similarity=0.015 Sum_probs=30.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.|+|.|.| .|.+|..++..|.+.|+ .|.+..|+.++.
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~---~V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPG---GVTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTT---CEEEECSSTTTS
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCC---eEEEEeCCHHHH
Confidence 36899998 79999999999999995 458888887654
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=89.84 E-value=0.47 Score=43.40 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=22.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQP 37 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~ 37 (399)
.+++|.|+|+ |.+|+.+++.+.+.++
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~ 27 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGH 27 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCC
Confidence 3589999999 9999999999988764
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=89.82 E-value=0.5 Score=46.25 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=30.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.-.|.+|+|+|+ |.+|...+..+...|. .+|.+..+++.+
T Consensus 211 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~~~ 250 (404)
T 3ip1_A 211 IRPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSEVR 250 (404)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCHHH
Confidence 346789999998 9999998888777784 256777665543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=89.78 E-value=0.6 Score=44.04 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=29.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
++|++|+|.|++|.+|+.++..|++.| ..|++..|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKEN---ATVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeC
Confidence 789999999999999999999999998 44565533
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=89.69 E-value=1 Score=44.80 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=30.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.+|+|+|.|. |-.|..+++.|.++| +.|.+..+..
T Consensus 6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G---~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGL-ARSGEAAARLLAKLG---AIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECC-TTTHHHHHHHHHHTT---CEEEEEESSC
T ss_pred hcCCCEEEEEee-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence 357899999998 889999999999999 5567776654
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=89.54 E-value=1.6 Score=36.03 Aligned_cols=37 Identities=11% Similarity=0.136 Sum_probs=27.3
Q ss_pred hhcCCcEEEEecCc---chhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 8 EFLENKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 8 ~~~~~~~IlVTGat---G~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
.+++.++|.|.|+| |-+|..+++.|++.|+ +|+...+
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~---~V~~vnp 49 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSKGF---EVLPVNP 49 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEECT
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC---EEEEeCC
Confidence 45677899999997 8899999999999995 4455433
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=89.51 E-value=0.69 Score=45.10 Aligned_cols=40 Identities=8% Similarity=0.054 Sum_probs=30.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
...|.+|+|+|+ |.+|...+..+...|. .+|++..+++++
T Consensus 183 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~~~ 222 (398)
T 2dph_A 183 VKPGSHVYIAGA-GPVGRCAAAGARLLGA--ACVIVGDQNPER 222 (398)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEESCHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCHHH
Confidence 356789999996 9999988887777783 267888876543
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=89.48 E-value=0.3 Score=47.47 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=31.3
Q ss_pred cCCcEEEEec-CcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSG-VTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTG-atG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.+|.+|+|.| |+|.+|...+..+...|. +|++.++++++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga---~Vi~~~~~~~~ 208 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGI---KLVNIVRKQEQ 208 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTC---CEEEEESSHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH
Confidence 4678999997 999999999988888894 56787776543
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=89.47 E-value=0.18 Score=48.13 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHh--CCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRV--QPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~--g~~V~~v~~~~R~~~~ 51 (399)
.|.+|+|+|| |.+|...+..+... | .+|++..+++++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~G---a~Vi~~~~~~~~ 208 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKN---ITIVGISRSKKH 208 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTT---CEEEEECSCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCC---CEEEEEeCCHHH
Confidence 7899999999 99999998888777 8 457887766543
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=89.41 E-value=0.39 Score=45.07 Aligned_cols=35 Identities=11% Similarity=0.002 Sum_probs=29.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.|+|.|.| .|.+|..++..|.+.| +.|.+..|+.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G---~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAG---LSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCC---CeEEEEECCHH
Confidence 47899997 7999999999999999 45677777654
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=89.37 E-value=0.35 Score=46.20 Aligned_cols=38 Identities=13% Similarity=0.241 Sum_probs=31.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.||+|.|.| .|.||+.+++.|...|+ +|.+..|+..
T Consensus 152 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~---~V~~~d~~~~ 189 (330)
T 2gcg_A 152 GLTQSTVGIIG-LGRIGQAIARRLKPFGV---QRFLYTGRQP 189 (330)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTC---CEEEEESSSC
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCCc
Confidence 47789999998 59999999999999995 4577777654
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=89.29 E-value=0.29 Score=47.43 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=29.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-.|.+|+|+|+ |.+|...+..+...|. .+|.+..++++
T Consensus 180 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~~ 218 (370)
T 4ej6_A 180 IKAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQAT 218 (370)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCHH
Confidence 456889999998 9999998888877884 25666655543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 399 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 7e-09 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-08 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-07 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-07 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 6e-05 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 5e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.001 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 0.002 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 0.002 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 0.002 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.002 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.004 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.004 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 54.8 bits (131), Expect = 7e-09
Identities = 49/352 (13%), Positives = 91/352 (25%), Gaps = 82/352 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K L++GVTG E +L + V +++ FN +
Sbjct: 2 KVALITGVTGQDGSYLAEFLL-------EKGYEVHGIKRRASS------------FNTER 42
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
+ + K GD+S D L+E +E+ + + + E +
Sbjct: 43 VDHIYQDPHTCNPKFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY 100
Query: 133 AFGINTLGVIHLVNFAKK--CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L+ + K F ST+ + G
Sbjct: 101 TADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL---------------------- 138
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE--N 248
+ PQKE T F + Y K + +E
Sbjct: 139 -----------VQEIPQKETTPFYPR------------SPYAVAKLYAYWITVNYRESYG 175
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLV-GETKVIMDVIPVDM 307
+ P G + I AQG CL G + D
Sbjct: 176 MYACNGILFNHES----PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231
Query: 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
V + + Q + + + ++ ++ K
Sbjct: 232 YVKMQWMML-----QQEQPEDFVIATG--VQYSVRQFVEMAAAQLGIKLRFE 276
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 1e-08
Identities = 50/316 (15%), Positives = 95/316 (30%), Gaps = 89/316 (28%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K IL++G GFV +K++ V
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEV--------------------------------- 28
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD- 131
T +++F + + V I E+ L + ++ E L+ E+D + + A+
Sbjct: 29 ----TVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYN 84
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
NT+G ++++ AK+ + ST+ V G+
Sbjct: 85 PIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGD--------------------- 121
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKE 247
+ PQ E N G Y K + E + +E
Sbjct: 122 ------------PEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 162
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307
+ + + R G G V ++ + + QG + G V
Sbjct: 163 GVEVRVARIFNTFGPRMHMNDGRV-----VSNFILQALQGEPLTVYGSGSQTRAFQYVSD 217
Query: 308 VVNAMIVAMVAHAKQP 323
+VN ++ M ++ P
Sbjct: 218 LVNGLVALMNSNVSSP 233
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (120), Expect = 1e-07
Identities = 49/381 (12%), Positives = 97/381 (25%), Gaps = 74/381 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
L++G+TG E +L + V S++
Sbjct: 2 NVALITGITGQDGSYLAEFLL-------EKGYEVHGIVRRSSSFNTGR-----------I 43
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E + I + GD++ D + E E+ + + + + +
Sbjct: 44 EHLYKNPQAHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101
Query: 133 AFGINTLGVIHLVNFAKKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L++ K C + F ST+ + G+
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK---------------------- 139
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
+ PQKE T F + Y K ++ + N
Sbjct: 140 -----------VQEIPQKETTPFYPR------------SPYGAAKLYAYWIVVNFREAYN 176
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
L V + K ++ +G D
Sbjct: 177 LFAVNGILFNHESPRRGA---NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKVS 368
V AM ++ +P D I S L G + N+ G+ +
Sbjct: 234 VEAMW--LMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETG 291
Query: 369 KIILFSSIASFHGYMQIRYLL 389
K+ + + +
Sbjct: 292 KVHVTVDLKYYRPTEVDFLQG 312
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.1 bits (119), Expect = 2e-07
Identities = 54/368 (14%), Positives = 105/368 (28%), Gaps = 91/368 (24%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
IL++G GF+ + I+ K V D + A ++ +
Sbjct: 3 ILITGGAGFIGSAVVRHII------KNTQDTVVNIDKLTYAGNLESLSDISE-------- 48
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
S + F DI DS ++ + D +++ AA + D
Sbjct: 49 ---------SNRYNFEHADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITG 92
Query: 132 --VAFGINTLGVIHLVNFAKKC--------VKLKVFVHVSTAYVAGERTGLILENPLDGA 181
N +G L+ A+K F H+ST V G+
Sbjct: 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLP----------- 141
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241
D + L T AP + Y +K + L
Sbjct: 142 ---HPDEVENSVTLPLFTETTAYAPS---------------------SPYSASKASSDHL 177
Query: 242 MQQSKE--NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVI 299
++ + L ++ + G P + K I + + + +G + G+ I
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYG------PYHFPE-KLIPLVILNALEGKPLPIYGKGDQI 230
Query: 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D + V+ A+ + + + Y++G V + +
Sbjct: 231 RDWLYVEDHARALHMVV----TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS 286
Query: 360 KQGKPVKV 367
+ + V
Sbjct: 287 YREQITYV 294
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 46.0 bits (108), Expect = 4e-06
Identities = 48/320 (15%), Positives = 84/320 (26%), Gaps = 81/320 (25%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G GF+ F+ ++L +EV+ D
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPA-----------------DEVIVLDSLT-YAGN 44
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAF 134
++ FV GDI L ++ + + + +I +
Sbjct: 45 RANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET-- 102
Query: 135 GINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G L+ A + VHVST V G
Sbjct: 103 --NVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGS-------------------------- 133
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKENLSLV 252
E + N + Y +K +++ + L +
Sbjct: 134 -------IDSGSWTESSPLEPN------------SPYAASKAGSDLVARAYHRTYGLDVR 174
Query: 253 IIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312
I R G Y+ P K I G L G+ + + + D +
Sbjct: 175 ITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227
Query: 313 IVAMVAHAKQPSDANIYHVG 332
+ + IYH+G
Sbjct: 228 ALVL----AGGRAGEIYHIG 243
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.3 bits (98), Expect = 6e-05
Identities = 53/359 (14%), Positives = 111/359 (30%), Gaps = 79/359 (22%)
Query: 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNV 70
+ K L++GV GF+ +E + L+ +V+ D F
Sbjct: 15 QPKVWLITGVAGFIGSNLLETL-----------------------LKLDQKVVGLDNFAT 51
Query: 71 LKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERY 130
++ + S +SEK I + L D N + + ++ +
Sbjct: 52 GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 111
Query: 131 DVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
+ N G ++++ A+ K++ F + +++ G+ GL
Sbjct: 112 ITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL------------------ 152
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKEN 248
P+ E T+ + Y TK + E+
Sbjct: 153 ---------------PKVEDTIGK------------PLSPYAVTKYVNELYADVFSRCYG 185
Query: 249 LSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308
S + +R V G ++P + I + QG+ + G+ + D ++
Sbjct: 186 FSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPVKV 367
V A ++A A + VG ++ D + ++ +PV
Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDG-----LAENGVSYHREPVYR 296
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.2 bits (91), Expect = 5e-04
Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 40/156 (25%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ KT+LV+G T + + F + + L NE L+K
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIH-----------TCARNEYEL---NECLSK 51
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLK-DSNLKEELWNELDIMVNSAAIT 124
++K ++T D S K + +LDI++N+
Sbjct: 52 -----WQKKGF---------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI 97
Query: 125 KF-------DERYDVAFGINTLGVIHLVNFAKKCVK 153
+ E + N HL A +K
Sbjct: 98 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK 133
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.001
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEK 74
+LV+G +G++ ++ L+ ++V+ D K
Sbjct: 3 VLVTGGSGYIGSHTCVQL-----------------------LQNGHDVIILDNLCNSKRS 39
Query: 75 WGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNEL--DIMVNSAAITKFDERYD- 131
+ + TFV GDI + L E+ ++ D +++ A + E
Sbjct: 40 VLPVIERLGGKHPTFVEGDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQK 92
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
+ N G + L++ + +K F+ S+A V G+
Sbjct: 93 PLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGD 130
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 32/168 (19%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K +LV+G G++ + ++ + + + D +
Sbjct: 2 KIVLVTGGAGYIGSHTVVEL-----------------------IENGYDCVVADNLSNST 38
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAA---ITKFDER 129
RL I F D+ + K ++D +++ A + + +
Sbjct: 39 YDSVARLEVLTKHHIPFYEVDLCD-----RKGLEKVFKEYKIDSVIHFAGLKAVGESTQI 93
Query: 130 YDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP 177
+ N LG + L+ ++ FV S+A V G+ T P
Sbjct: 94 PLRYYHNNILGTVVLLELMQQYNV-SKFVFSSSATVYGDATRFPNMIP 140
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 37.5 bits (87), Expect = 0.002
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 86 KITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINT 138
F D+ E ++ +D++VN+AAI + +N
Sbjct: 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108
Query: 139 LGVIHLVN-FAKKCVKLKVFVHVSTAYVAGER 169
+HL A++ K+ V+ A V G
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLF 140
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 37.3 bits (86), Expect = 0.002
Identities = 34/171 (19%), Positives = 57/171 (33%), Gaps = 42/171 (24%)
Query: 10 LENKTILVSGVTG----FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAK 65
L+ K LV+G V K+ + + +V +DI+ AA + LA
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVA-----------FSDINEAAG----QQLAA 48
Query: 66 DVFNVLKEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK 125
+ + E+ FV D+SSE + L+++VN+A I
Sbjct: 49 E----------------LGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL 92
Query: 126 F-------DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
E + INT V +K ++ A V+
Sbjct: 93 PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL 143
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 37.3 bits (85), Expect = 0.002
Identities = 51/323 (15%), Positives = 91/323 (28%), Gaps = 77/323 (23%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
K I+V+G GF+ F+ + P+V V D
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVH---------------------VTVLDKLTYAG 41
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYD- 131
K L + + +++ V GDI+ D+ L ++L + D +V+ AA + D +
Sbjct: 42 NKA--NLEAILGDRVELVVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLND 92
Query: 132 --VAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
N +G F HVST V G+ L +
Sbjct: 93 PSPFIHTNFIGTYT--LLEAARKYDIRFHHVSTDEVYGD---------------LPLRED 135
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKE 247
+ + E T + Y TK +++++
Sbjct: 136 LPGHGEGPGEKFTAETNYNPS------------------SPYSSTKAASDLIVKAWVRSF 177
Query: 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307
+ I + G Y+ + I G L GE K + D I +
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNI-------LAGIKPKLYGEGKNVRDWIHTND 230
Query: 308 VVNAMIVAMVAHAKQPSDANIYH 330
+ + +
Sbjct: 231 HSTGVWAILTKGRMGETYLIGAD 253
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 36.5 bits (84), Expect = 0.004
Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFN 69
LE T LV+G + + +E++ + +V + L D
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASV-------YTCSRNQKEL--------NDCLT 50
Query: 70 VLKEKWGTRLNSFISEKITFVPGDISSEDLGLKD--SNLKEELWNELDIMVNSAAITKF- 126
+ K K+ D+SS ++ + + +L+I+VN+A I +
Sbjct: 51 QWRSKGF---------KVEASVCDLSSRS-ERQELMNTVANHFHGKLNILVNNAGIVIYK 100
Query: 127 ------DERYDVAFGINTLGVIHLVNFAKKCVK 153
E Y + IN HL A +K
Sbjct: 101 EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK 133
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.5 bits (83), Expect = 0.004
Identities = 40/307 (13%), Positives = 77/307 (25%), Gaps = 78/307 (25%)
Query: 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLK 72
++ LV+G+TG + +L +K Y V ++ L+
Sbjct: 1 RSALVTGITGQDGAYLAKLLL------EKGY-RVHGLVARRSSDTRWR----------LR 43
Query: 73 EKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDV 132
E I I + GD++ D + + E+ + + + +
Sbjct: 44 EL-------GIEGDIQYEDGDMA--DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVT 94
Query: 133 AFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKV 192
++ LGV HL+ ++ F ST+ + G
Sbjct: 95 TGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGL------------------------ 130
Query: 193 IDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ--QSKENLS 250
E + + Y K G + + L
Sbjct: 131 --------------------IQAERQDENTPFY-PRSPYGVAKLYGHWITVNYRESFGLH 169
Query: 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVV 309
P G + + G + L +G D V
Sbjct: 170 ASSGILFNHES----PLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYV 225
Query: 310 NAMIVAM 316
AM + +
Sbjct: 226 EAMWLML 232
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 399 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.98 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.98 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.93 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.91 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.9 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.9 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.89 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.89 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.89 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.87 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.83 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.78 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.78 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.77 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.77 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.76 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.76 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.76 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.76 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.76 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.76 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.75 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.74 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.74 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.74 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.74 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.73 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.73 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.73 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.73 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.73 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.73 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.72 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.72 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.72 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.72 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.71 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.71 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.71 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.71 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.7 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.7 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.7 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.7 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.7 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.7 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.69 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.69 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.68 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.67 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.67 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.67 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.66 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.65 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.64 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.63 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.62 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.62 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.61 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.6 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.58 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.57 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.57 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.56 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.56 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.55 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.54 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.52 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.5 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.41 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.38 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.37 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.32 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.29 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.27 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.12 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.87 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.67 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.61 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.61 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.35 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.32 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.21 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.2 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.15 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.13 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.08 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.0 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.99 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.93 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.92 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.86 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.82 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.79 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.74 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.7 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.65 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.62 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.59 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.57 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.55 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.45 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.3 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.23 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.23 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 96.2 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.14 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.13 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.07 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.03 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 95.82 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.79 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.75 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.72 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 95.67 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 95.57 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 95.48 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.42 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.33 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.3 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.91 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 94.9 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.87 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.6 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.56 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 94.47 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.15 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 93.97 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 93.86 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 93.76 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 93.73 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 93.65 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 93.6 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 93.55 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 93.26 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 93.09 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 92.99 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 92.82 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 92.71 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 92.55 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 92.53 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 92.39 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.14 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.01 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.49 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 91.2 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 90.94 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 90.87 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 90.78 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 90.58 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 90.37 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 90.21 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 89.93 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 89.79 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 89.67 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 89.5 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 89.11 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 89.07 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 88.99 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.61 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 88.33 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 88.31 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.18 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 88.15 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.95 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 87.9 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 87.78 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 87.59 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 87.23 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 87.12 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 87.09 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 87.06 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 86.98 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.9 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 86.83 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 86.51 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 86.5 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 86.5 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 86.34 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 86.16 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 86.14 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 86.14 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 86.03 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 86.02 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 85.87 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 85.66 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 83.28 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 83.23 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 82.98 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 82.92 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 82.78 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 82.76 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 82.46 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 82.39 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 82.38 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 82.04 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 81.47 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 81.44 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 80.99 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 80.76 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 80.68 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 80.3 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=3e-33 Score=269.28 Aligned_cols=257 Identities=20% Similarity=0.219 Sum_probs=200.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCe---EEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKK---LYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~---v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+|||||||||||++|+++|+++|++|.. ++.+.+........ .+. ......++++
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-~~~--------------------~~~~~~~~~~ 59 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLA--------------------PVDADPRLRF 59 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-GGG--------------------GGTTCTTEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-Hhh--------------------hhhcCCCeEE
Confidence 78999999999999999999999988743 34443322111000 000 0012468999
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+.+|+. +..........+|+|+|+|+.... .......+++|+.++.+++++|.+. ++++|||+||+++|
T Consensus 60 ~~~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 60 VHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (322)
T ss_dssp EECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEeccc-------cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceee
Confidence 999999 455555677889999999987643 3566778899999999999999996 78999999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
|.... .+++|+.+ ..|.+.|+.+|.++|.+++.+
T Consensus 132 g~~~~----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~ 166 (322)
T d1r6da_ 132 GSIDS----GSWTESSP-----------------------------------------LEPNSPYAASKAGSDLVARAYH 166 (322)
T ss_dssp CCCSS----SCBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCC----CCCCCCCC-----------------------------------------CCCCCHHHHHHHHHHHHHHHHH
Confidence 97542 22333322 245678999999999999987
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
+.+++++++||+.|||+++.+ ...+..++.++..|....+.+++++.+||+|++|+|++++.++.....
T Consensus 167 ~~~~~~~~~lR~~~vyGp~~~~-------~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~--- 236 (322)
T d1r6da_ 167 RTYGLDVRITRCCNNYGPYQHP-------EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--- 236 (322)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-------TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT---
T ss_pred HHhCCCEEEEEeeeEECcCCCc-------CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC---
Confidence 568999999999999987632 134556777888888777789999999999999999999999985433
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++||++++ +++|+.|+++.+.+.+|...
T Consensus 237 -~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 265 (322)
T d1r6da_ 237 -GEIYHIGGG--LELTNRELTGILLDSLGADW 265 (322)
T ss_dssp -TCEEEECCC--CEEEHHHHHHHHHHHHTCCG
T ss_pred -CCeeEEeec--ccchhHHHHHHHHHHhCCCc
Confidence 579999999 88999999999999998653
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.9e-34 Score=278.23 Aligned_cols=258 Identities=14% Similarity=0.092 Sum_probs=189.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc--ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI--DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||++|+++|+++| +.|+++.|.... ....+++..+ ......+++++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 60 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFNTERVDHIYQD------------------PHTCNPKFHLH 60 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC---------------------------------------CCEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc---CEEEEEECCCcccchhhHHHHHhh------------------hhhcCCCeEEE
Confidence 789999999999999999999999 566888886432 1111111110 11124689999
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEEEEecc
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFVHVSTA 163 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v~~SS~ 163 (399)
++|++ +.+.+..+++ ++|+|+|+||..+. .+++..++++|+.||.+|+++|++. +++++|||+||+
T Consensus 61 ~~Dl~-------d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~ 133 (357)
T d1db3a_ 61 YGDLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS 133 (357)
T ss_dssp CCCSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred EeecC-------CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch
Confidence 99999 5566656666 56999999998653 3567788999999999999999985 245689999999
Q ss_pred eeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHH
Q 015874 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQ 243 (399)
Q Consensus 164 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~ 243 (399)
+|||.... .+.+|+++ ..|.+.|+.+|+++|++++
T Consensus 134 ~vYG~~~~----~~~~E~~~-----------------------------------------~~P~~~Y~~sK~~~E~~~~ 168 (357)
T d1db3a_ 134 ELYGLVQE----IPQKETTP-----------------------------------------FYPRSPYAVAKLYAYWITV 168 (357)
T ss_dssp GGGTTCCS----SSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHH
T ss_pred hhhCCCCC----CCcCCCCC-----------------------------------------CCCCChHHHHHHHHHHHHH
Confidence 99986432 22333322 2446789999999999999
Q ss_pred Hh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc-ccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 244 QS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL-RCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 244 ~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
.+ ..+++++++||++||||+..+. .....+...+.....+.. ....+++++.+|++|++|+|++++.+++..
T Consensus 169 ~~~~~~~l~~~ilR~~~vyGp~~~~~----~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~- 243 (357)
T d1db3a_ 169 NYRESYGMYACNGILFNHESPRRGET----FVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE- 243 (357)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTT----SHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-
T ss_pred HHHHHhCCCEEEEEeccccCCCCCcC----CCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-
Confidence 87 5689999999999999875321 111233445555555544 344588899999999999999999988632
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
. +++||++++ .++|+.|+++.+.+.+|.
T Consensus 244 ~----~~~yni~sg--~~~s~~~~~~~~~~~~g~ 271 (357)
T d1db3a_ 244 Q----PEDFVIATG--VQYSVRQFVEMAAAQLGI 271 (357)
T ss_dssp S----CCCEEECCC--CCEEHHHHHHHHHHTTTE
T ss_pred C----CCeEEECCC--CceehHHHHHHHHHHhCC
Confidence 1 468999999 779999999999999984
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-34 Score=273.05 Aligned_cols=253 Identities=17% Similarity=0.156 Sum_probs=194.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||++|+++|+++|+ .|.++.|..... ..... .....++.+..
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~---~V~~~d~~~~~~~~~~~~-----------------------~~~~~~~d~~~ 55 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGRKRNVEH-----------------------WIGHENFELIN 55 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCGGGTGG-----------------------GTTCTTEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCCcCCHHHHHH-----------------------hcCCCceEEEe
Confidence 7899999999999999999999994 557776643221 11100 01123455555
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
.|+.+ .+..++|+|||+||..+. ..++...+++|+.++.+|++++++. ++ ++||+||++||+.
T Consensus 56 ~~~~~------------~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~ 121 (312)
T d2b69a1 56 HDVVE------------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGD 121 (312)
T ss_dssp CCTTS------------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBS
T ss_pred hHHHH------------HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecC
Confidence 55542 234579999999998653 3567788999999999999999985 54 7999999999997
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
... .+.|+.+.+..| ..|.+.|+.+|.++|.+++.+
T Consensus 122 ~~~~~~~e~~~~~~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~ 160 (312)
T d2b69a1 122 PEVHPQSEDYWGHVNP-----------------------------------------IGPRACYDEGKRVAETMCYAYMK 160 (312)
T ss_dssp CSSSSBCTTCCCBCCS-----------------------------------------SSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCCCCC-----------------------------------------CCCccHHHHHHHHHHHHHHHHHH
Confidence 543 556665544332 244578999999999999887
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
..+++++++||+.||||+.... ....+..++.++..|+...+++++.+.+|++|++|+|++++.+++...
T Consensus 161 ~~~~~~~~lR~~~vyGp~~~~~-----~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~----- 230 (312)
T d2b69a1 161 QEGVEVRVARIFNTFGPRMHMN-----DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV----- 230 (312)
T ss_dssp HHCCCEEEEEECCEECTTCCTT-----CCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-----
T ss_pred HhCCcEEEEEeeeEECCCCCCC-----CccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc-----
Confidence 5689999999999999886321 123456777888888888888999999999999999999998886322
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
.++||++++ .++++.++++.+++.++.....
T Consensus 231 ~~~~n~~~~--~~~~~~~~~~~i~~~~~~~~~~ 261 (312)
T d2b69a1 231 SSPVNLGNP--EEHTILEFAQLIKNLVGSGSEI 261 (312)
T ss_dssp CSCEEESCC--CEEEHHHHHHHHHHHHTCCCCE
T ss_pred CCceEecCC--cccchhhHHHHHHHHhCCCCce
Confidence 467999999 8899999999999999876543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=6e-33 Score=272.10 Aligned_cols=263 Identities=18% Similarity=0.212 Sum_probs=195.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++|++| |.++.+..... ..+.+. ......+++++.+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~-~~~~~~--------------------~~~~~~~~~~~~~ 57 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAG-NLESLS--------------------DISESNRYNFEHA 57 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTC-CGGGGT--------------------TTTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCccc-cHHHHH--------------------hhhhcCCcEEEEc
Confidence 689999999999999999999999754 44444332211 111100 0012468999999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhcc--------CCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCV--------KLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~--------~~~~~v~ 159 (399)
|+++ .+.+..+++ ++|+|||+||..+.. .++...+++|+.++.+++++|++.. ++++|||
T Consensus 58 Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 58 DICD-------SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred cCCC-------HHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 9994 444445554 689999999986542 4567789999999999999998751 3568999
Q ss_pred EecceeecCcCCc-cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAYVAGERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~v~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
+||+.+||..... ..|..... +.. ....+..|.+.|+.+|.++
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~--~~~----------------------------------~e~~~~~p~s~Yg~sK~~~ 174 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVTL--PLF----------------------------------TETTAYAPSSPYSASKASS 174 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSCC--CCB----------------------------------CTTSCCCCCSHHHHHHHHH
T ss_pred eccceeeCCCccCCccccccCC--CCc----------------------------------ccCCCCCCCCHHHHHHHHH
Confidence 9999999976532 11221110 000 0012235678899999999
Q ss_pred HHHHHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHH
Q 015874 239 EMLMQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAM 316 (399)
Q Consensus 239 E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~ 316 (399)
|.+++.+ ..+++++++||++||||+..+ -..+..++.++..|+...+++++++.++|+|++|+|++++.++
T Consensus 175 E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-------~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~ 247 (361)
T d1kewa_ 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-------EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEESTTCCT-------TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCceECcCCCc-------CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHH
Confidence 9999987 568999999999999987632 1345567778888887778899999999999999999999999
Q ss_pred HhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 317 ~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
+.... +++||++++ ++.|+.|+++.+.+.++.
T Consensus 248 ~~~~~----~~~~Ni~s~--~~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 248 TEGKA----GETYNIGGH--NEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHCCT----TCEEEECCC--CEEEHHHHHHHHHHHHHH
T ss_pred hcCCC----CCeEEECCC--CCcchHHHHhHhhhhccc
Confidence 85433 569999999 789999999999988764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.5e-32 Score=263.60 Aligned_cols=267 Identities=17% Similarity=0.199 Sum_probs=206.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID-SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
++.|+|||||||||||++|+++|+++| ++|.+++|..... ...++.+... ......++.
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 73 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSLV-----------------SEKQWSNFK 73 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHS-----------------CHHHHTTEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHHhh-----------------hhcccCCee
Confidence 455899999999999999999999999 5568887754322 2222222111 111236889
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
++.+|+. +...........+.|+|+|+.... ..++...+++|+.|+.+++++|.+. ++++|||+||.++
T Consensus 74 ~~~~d~~-------d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~v 145 (341)
T d1sb8a_ 74 FIQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST 145 (341)
T ss_dssp EEECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred EEeeccc-------cccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEccccee
Confidence 9999999 555665677789999999987653 3566778999999999999999997 7899999999999
Q ss_pred ecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
||.... .+.|+ .+ ..|.+.|+.+|.++|++++.
T Consensus 146 yg~~~~~~~~E~-----~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~ 179 (341)
T d1sb8a_ 146 YGDHPGLPKVED-----TI-----------------------------------------GKPLSPYAVTKYVNELYADV 179 (341)
T ss_dssp GTTCCCSSBCTT-----CC-----------------------------------------CCCCSHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCccCC-----CC-----------------------------------------CCCCCcchHHHHHHHHHHHH
Confidence 997543 23333 22 24567899999999999988
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
+ ..+++++++||+.|||++..+...+ . ..+..++..+..|+...+.+++.+.++|+|++|+|.++..++......
T Consensus 180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~-~--~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~ 256 (341)
T d1sb8a_ 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAY-A--AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDA 256 (341)
T ss_dssp HHHHHCCCCEEEEECCEECTTCCCCSTT-C--CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG
T ss_pred HHHHhCCCeEEEEeceeeccCcCCCCch-h--hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccc
Confidence 7 5689999999999999987542211 1 344566777888887778889999999999999999999988643332
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 323 ~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
. +.+||++++ +.+|+.|+++.+.+.++....
T Consensus 257 ~--~~~~~~~~~--~~~si~~i~~~i~~~~~~~~~ 287 (341)
T d1sb8a_ 257 R--NQVYNIAVG--GRTSLNQLFFALRDGLAENGV 287 (341)
T ss_dssp C--SEEEEESCS--CCEEHHHHHHHHHHHHHHTTC
T ss_pred c--ceeeeeccc--ccchHHHHHHHHHHHhccccc
Confidence 2 679999998 779999999999999986543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.3e-32 Score=265.86 Aligned_cols=263 Identities=16% Similarity=0.053 Sum_probs=197.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|||||||||||++|+++|+++|+ .|+++.|........ ......+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~---~V~~~d~~~~~~~~~---------------------------~~~~~~~~ 63 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMTE---------------------------DMFCDEFH 63 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEeCCCccchhh---------------------------hcccCcEE
Confidence 678999999999999999999999994 557776654432110 12456788
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
.+|+. +.+......+++|+|||+|+.... ..........|+.++.++++++++. ++++||++||..+|
T Consensus 64 ~~D~~-------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~ 135 (363)
T d2c5aa1 64 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 135 (363)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred Eeech-------hHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccc
Confidence 89998 455555777899999999987654 4567778899999999999999996 89999999999999
Q ss_pred cCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+.... ...|.... .....+..|.+.|+.+|.++|++++.+
T Consensus 136 ~~~~~~~~~~~~~~---------------------------------------~~e~~~~~p~~~Yg~sK~~~E~~~~~~ 176 (363)
T d2c5aa1 136 PEFKQLETTNVSLK---------------------------------------ESDAWPAEPQDAFGLEKLATEELCKHY 176 (363)
T ss_dssp CGGGSSSSSSCEEC---------------------------------------GGGGSSBCCSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccc---------------------------------------cccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence 96542 22222111 001123356788999999999999987
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||+.|||+.+........ ...................+++.+.+||+|++|+|++++.+++.. .
T Consensus 177 ~~~~gl~~~ilR~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~-- 251 (363)
T d2c5aa1 177 NKDFGIECRIGRFHNIYGPFGTWKGGREK--APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F-- 251 (363)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSCCC--HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C--
T ss_pred HHHhCCCEEEEEeeeEeccCCcccccccc--cccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-C--
Confidence 568999999999999998743222111 222223334444455556688889999999999999999988632 1
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~ 359 (399)
+++||++++ .++|+.|+++.+.+..|++..+.
T Consensus 252 --~~~~ni~~~--~~~s~~~l~~~i~~~~g~~~~i~ 283 (363)
T d2c5aa1 252 --REPVNIGSD--EMVSMNEMAEMVLSFEEKKLPIH 283 (363)
T ss_dssp --CSCEEECCC--CCEEHHHHHHHHHHTTTCCCCEE
T ss_pred --CCeEEEecC--CcccHHHHHHHHHHHhCCCCceE
Confidence 468999999 77999999999999998765443
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.5e-32 Score=260.61 Aligned_cols=269 Identities=19% Similarity=0.219 Sum_probs=201.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++|+ .+|+++.+........ ....+++++.+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~~~--------------------------~~~~~~~~i~~ 52 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAISRF--------------------------LNHPHFHFVEG 52 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGGGG--------------------------TTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchhhh--------------------------ccCCCeEEEEC
Confidence 6899999999999999999999985 3578887654332111 01368999999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
|+++ ..+..+...+++|+|||+|+..+.. ..+...+..|+.|+.++++++.+. + .+++++||..+|+..
T Consensus 53 Di~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss~~~~~~~ 124 (342)
T d2blla1 53 DISI------HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMC 124 (342)
T ss_dssp CTTT------CSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTC
T ss_pred ccCC------hHHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-c-ccccccccccccccc
Confidence 9996 3444544667899999999987643 455678999999999999999985 4 456789999999976
Q ss_pred CCc-cccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--h
Q 015874 170 TGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--K 246 (399)
Q Consensus 170 ~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--~ 246 (399)
... ..|..... . ..+...|.+.|+.+|.++|+++..+ .
T Consensus 125 ~~~~~~~~~~~~-~--------------------------------------~~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 165 (342)
T d2blla1 125 SDKYFDEDHSNL-I--------------------------------------VGPVNKPRWIYSVSKQLLDRVIWAYGEK 165 (342)
T ss_dssp CCSSBCTTTCCC-B--------------------------------------CCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccc-c--------------------------------------ccccCCCcchhhhcccchhhhhhhhhcc
Confidence 532 22211100 0 0011234568999999999999887 5
Q ss_pred CCCcEEEEecCceecCCCCCCCCcc-cCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWV-EDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~ 325 (399)
.+++++++|++.+||+......+.. ........++.++..|....+++++++.++++|++|+|+++..++...... ..
T Consensus 166 ~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~-~~ 244 (342)
T d2blla1 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR-CD 244 (342)
T ss_dssp HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT-TT
T ss_pred cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhcccc-CC
Confidence 6899999999999999764432222 222445677788888888888899999999999999999999999853222 22
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 326 ~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+++||++++. .++|+.|+++.+.+.++..+..
T Consensus 245 g~~~Nig~~~-~~~t~~~l~~~i~~~~~~~~~~ 276 (342)
T d2blla1 245 GEIINIGNPE-NEASIEELGEMLLASFEKHPLR 276 (342)
T ss_dssp TEEEEECCTT-SEEEHHHHHHHHHHHHHTCTTG
T ss_pred CeEEEEeccc-chhHHHHHHHHHHHHhCCCccc
Confidence 6899998762 4589999999999999865543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.98 E-value=5.4e-31 Score=255.84 Aligned_cols=266 Identities=21% Similarity=0.235 Sum_probs=197.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
.+|+|||||||||||++|+++|+++|++| .+++|+... ..... ........++++
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v---~v~~~d~~~~~~~~~---------------------~~~~~~~~~i~~ 56 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDV---HVTVLDKLTYAGNKA---------------------NLEAILGDRVEL 56 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTC---EEEEEECCCTTCCGG---------------------GTGGGCSSSEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCe---EEEEEeCCCccccHH---------------------HHHHhhcCCeEE
Confidence 36899999999999999999999999775 444443211 00000 011223578999
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+.+|+. +.+.+..+..+.|.|+|+|+.... ..++...+++|+.++.++++++... + .++|++||+.+|
T Consensus 57 ~~~Di~-------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vy 127 (346)
T d1oc2a_ 57 VVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVY 127 (346)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGG
T ss_pred EEccCC-------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEe
Confidence 999999 667777888999999999998654 2556778999999999999999885 3 579999999999
Q ss_pred cCcCCccccc-cCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTGLILEN-PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
|.... .|+ +.....+.. ......+..|.+.|+.+|.++|.+++.+
T Consensus 128 g~~~~--~~~~~~~~~~~~~--------------------------------~~~e~~~~~p~s~Y~~sK~~~E~~~~~~ 173 (346)
T d1oc2a_ 128 GDLPL--REDLPGHGEGPGE--------------------------------KFTAETNYNPSSPYSSTKAASDLIVKAW 173 (346)
T ss_dssp CCBCC--GGGSTTTTCSTTS--------------------------------SBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cccCc--cccccccccCccc--------------------------------ccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 85421 111 111000000 0111123456788999999999999887
Q ss_pred --hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCC
Q 015874 246 --KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQP 323 (399)
Q Consensus 246 --~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~ 323 (399)
..+++++++||++||||.... ...+..++.....+....+.+++.+.++++|++|+|++++.++.....
T Consensus 174 ~~~~~i~~~ilR~~~vyGp~~~~-------~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-- 244 (346)
T d1oc2a_ 174 VRSFGVKATISNCSNNYGPYQHI-------EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM-- 244 (346)
T ss_dssp HHHHCCEEEEEEECCEESTTCCT-------TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT--
T ss_pred HHHcCCCEEEEeecceeCCCCCc-------cchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhccc--
Confidence 568999999999999987622 133445566666777777788999999999999999999988874433
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 324 ~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+..||++++ ++.++.++++.+.+.+++..
T Consensus 245 --~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 245 --GETYLIGAD--GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp --TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred --Ccccccccc--ccccchHHHHHHHHHhCCCC
Confidence 578999998 78999999999999998743
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=9.9e-31 Score=253.32 Aligned_cols=266 Identities=17% Similarity=0.216 Sum_probs=191.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|+|||||||||||++|++.|+++| +.|+++.|...... ....... ....++.+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 56 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIER---------------------LGGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHH---------------------HHTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHh---------------------hcCCCCEEEE
Confidence 789999999999999999999999 45577766433221 1111110 0136899999
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|++ +.+.+..+++ ++|+|||+||..+.. +++..++++|+.|+.+++++|++. ++++||++||.++|
T Consensus 57 ~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 57 GDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTT-------CHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecC-------CHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEE
Confidence 9999 4555556665 799999999986532 467788999999999999999997 89999999999999
Q ss_pred cCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh
Q 015874 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS 245 (399)
Q Consensus 167 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~ 245 (399)
+.... ...|.. ....+.+.|+.+|..+|+++..+
T Consensus 129 ~~~~~~~~~e~~---------------------------------------------~~~~p~~~Y~~sK~~~e~~~~~~ 163 (338)
T d1udca_ 129 GDQPKIPYVESF---------------------------------------------PTGTPQSPYGKSKLMVEQILTDL 163 (338)
T ss_dssp CSCCSSSBCTTS---------------------------------------------CCCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccc---------------------------------------------ccCCCcchHHHHHhhhhHHHHHH
Confidence 86542 111111 11245678999999999999865
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCc---ccCcchHHHHHHHhhcC-ccccccC------CCccccCeeeHHHHHHHH
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGW---VEDLKTINTLFVASAQG-NLRCLVG------ETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~v~Dva~~i 312 (399)
..+++++++|++.|||++....-+. ......+..++.....+ ....+.+ ++.+.+||+|++|++.++
T Consensus 164 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~ 243 (338)
T d1udca_ 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGH 243 (338)
T ss_dssp HHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHH
T ss_pred HhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhc
Confidence 3589999999999999876322111 11112223333333332 2333333 467889999999999998
Q ss_pred HHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
..+......... +++||++++ +++|+.|+++.+.+.+|.+...
T Consensus 244 ~~~~~~~~~~~~-~~i~Ni~~~--~~~si~e~~~~i~~~~g~~~~~ 286 (338)
T d1udca_ 244 VVAMEKLANKPG-VHIYNLGAG--VGNSVLDVVNAFSKACGKPVNY 286 (338)
T ss_dssp HHHHHHHTTCCE-EEEEEESCS--SCEEHHHHHHHHHHHHTSCCCE
T ss_pred cccccccccccC-cceeeecCC--CCCcHHHHHHHHHHHHCCCCce
Confidence 887764333222 679999998 7799999999999999865433
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=1.1e-30 Score=257.88 Aligned_cols=282 Identities=15% Similarity=0.079 Sum_probs=190.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC-----------cccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD-----------IDSAALRFQNEVLAKDVFNVLKEKWGTRLN 80 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (399)
||+|||||||||||++|+++|+++|++|..+..+.|+.. .....+++.. +.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~ 62 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR------------------WK 62 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH------------------HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHH------------------HH
Confidence 799999999999999999999999966533332323210 0011111110 01
Q ss_pred ccccCceEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc------ccHHHHHHHhHHHHHHHHHHHHhcc
Q 015874 81 SFISEKITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCV 152 (399)
Q Consensus 81 ~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~------~~~~~~~~~n~~~~~~ll~~a~~~~ 152 (399)
...+.+++++.+|++ +.+.+..+++ ++|+|||+||..... .....++..|+.|+.+++++|++..
T Consensus 63 ~~~~~~i~~~~~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~ 135 (393)
T d1i24a_ 63 ALTGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG 135 (393)
T ss_dssp HHHCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhcCCCcEEEEccCC-------CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence 112468999999999 5566656665 579999999976432 3355678999999999999999974
Q ss_pred CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhh
Q 015874 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYV 232 (399)
Q Consensus 153 ~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 232 (399)
..+++++.||..+|+.......|........... -....+..+.+.|+
T Consensus 136 ~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~p~~~Y~ 183 (393)
T d1i24a_ 136 EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRT--------------------------------DTLPYPKQASSFYH 183 (393)
T ss_dssp TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEE--------------------------------EEEECCCCCCSHHH
T ss_pred cccceeeccccccccccccccccccccccccccc--------------------------------cccccccccccHHH
Confidence 5567888999988886543332221100000000 00001234567899
Q ss_pred HhHHHHHHHHHHh--hCCCcEEEEecCceecCCCCCCCC--c--------ccCcchHHHHHHHhhcCccccccCCCcccc
Q 015874 233 FTKTMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPFPG--W--------VEDLKTINTLFVASAQGNLRCLVGETKVIM 300 (399)
Q Consensus 233 ~sK~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
.+|+++|.++..+ ..+++++++||++|||+...+... . ......+..++.+...|....+++++.+.+
T Consensus 184 ~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~r 263 (393)
T d1i24a_ 184 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTR 263 (393)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred HHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeeccccc
Confidence 9999999999877 668999999999999998643110 0 001123456677778888888889999999
Q ss_pred CeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 301 ~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
||+||+|+|++++.+++... ..+....++.++ +.+|+.|+++.+.+..+.
T Consensus 264 d~v~v~D~~~a~~~~~~~~~-~~g~~~~~~~~~---~~~si~el~~~i~~~~~~ 313 (393)
T d1i24a_ 264 GYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT---EQFSVNELASLVTKAGSK 313 (393)
T ss_dssp EEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS---EEEEHHHHHHHHHHHHHT
T ss_pred ccccccchHHHHHHHHHhhc-ccceeeeecCCC---CeeEHHHHHHHHHHHHHh
Confidence 99999999999999997432 222223444443 568999999999988764
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.5e-29 Score=244.12 Aligned_cols=272 Identities=17% Similarity=0.168 Sum_probs=191.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS-AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
|.|||||||||||++|++.|+++|+ +|+++.|...... ...+... ....+++++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~---~V~~~d~~~~~~~~~~~~~~~---------------------~~~~~v~~~~ 57 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEV---------------------LTKHHIPFYE 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHH---------------------HHTSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC---eEEEEECCCCcchhHHHhHHh---------------------hcccCCeEEE
Confidence 5799999999999999999999994 5577665433221 1111110 0136889999
Q ss_pred ccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceee
Q 015874 92 GDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVA 166 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~ 166 (399)
+|+++ .+.+..++. ++|+|||+||.... .+.+..+..+|+.++.+++++|++. ++++||++||+.||
T Consensus 58 ~Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vy 129 (347)
T d1z45a2 58 VDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 129 (347)
T ss_dssp CCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecCC-------HHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeee
Confidence 99994 555545444 79999999998653 3456778899999999999999996 89999999999999
Q ss_pred cCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 167 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
|.......+.+++|+. +..+.+.|+.+|.++|++++.+
T Consensus 130 g~~~~~~~~~~~~e~~-----------------------------------------~~~p~~~Y~~sK~~~E~~~~~~~ 168 (347)
T d1z45a2 130 GDATRFPNMIPIPEEC-----------------------------------------PLGPTNPYGHTKYAIENILNDLY 168 (347)
T ss_dssp CCGGGSTTCCSBCTTS-----------------------------------------CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCcccccc-----------------------------------------CCCCCChhHhHHHHHHHHHHHHH
Confidence 9765433344444332 2345678999999999999876
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCccc--CcchHHHHHHHhhc--CccccccCC------CccccCeeeHHHHHHHH
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQ--GNLRCLVGE------TKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~i~v~Dva~~i 312 (399)
..+++++++|++.|||+.....-+... ....+..++..... +....+.++ +...+|++++.|++.++
T Consensus 169 ~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~ 248 (347)
T d1z45a2 169 NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGH 248 (347)
T ss_dssp HHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHH
T ss_pred HhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccc
Confidence 457899999999999987633211111 11223333333322 233333343 34577899999999999
Q ss_pred HHHHHhcc---CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCCC
Q 015874 313 IVAMVAHA---KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359 (399)
Q Consensus 313 ~~~~~~~~---~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~~ 359 (399)
+.++.... ......++||++++ +++|+.|+++.+.+.+|.+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~~~ 296 (347)
T d1z45a2 249 IAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLPYK 296 (347)
T ss_dssp HHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCCC-
T ss_pred cccccccccccccccccccceecCC--CcccHHHHHHHHHHHHCCCCceE
Confidence 88876422 11222679999998 78999999999999999765554
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=9.5e-30 Score=243.53 Aligned_cols=256 Identities=16% Similarity=0.103 Sum_probs=192.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|++.|+++| ++|+++.|...... ..++... ....+++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g---~~V~~~~r~~~~~~-~~~l~~~--------------------~~~~~~~~~~~ 56 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDT-RWRLREL--------------------GIEGDIQYEDG 56 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCC-CHHHHHT--------------------TCGGGEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCccc-HHHHHHh--------------------cccCCcEEEEc
Confidence 689999999999999999999999 56689988764321 1222210 12368999999
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|+++ .+....... ..++++|+|+.... .......++.|+.|+.++++++++.+..++|++.||..+|+
T Consensus 57 Dl~d-------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 57 DMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred cccC-------hHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 9995 444434443 57899999887654 35567789999999999999999975567899999999988
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
.... ...+|+.+ ..+.+.|+.+|.++|+++..+
T Consensus 130 ~~~~----~~~~E~~~-----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~ 164 (321)
T d1rpna_ 130 LIQA----ERQDENTP-----------------------------------------FYPRSPYGVAKLYGHWITVNYRE 164 (321)
T ss_dssp SCSS----SSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cccC----CCCCCCCC-----------------------------------------ccccChhHHHHHHHHHHHHHHHh
Confidence 6543 12222222 245678999999999999987
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+++|||.... .. ....+..++.+...+..+ ...+++++.++|+|++|+|++++.++... .
T Consensus 165 ~~~~~~~~lr~~~vyGp~~~~-~~---~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~-~--- 236 (321)
T d1rpna_ 165 SFGLHASSGILFNHESPLRGI-EF---VTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD-K--- 236 (321)
T ss_dssp HHCCCEEEEEECCEECTTSCT-TS---HHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-S---
T ss_pred hcCCcEEEEEEecccCCCccc-cc---cHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC-C---
Confidence 578999999999999987522 11 112334455555554433 45688899999999999999999999743 2
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.+.||++++ ++.|+.++++.+.+.++..
T Consensus 237 -~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 237 -ADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp -CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred -cCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 357999998 7899999999999998864
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-29 Score=244.04 Aligned_cols=262 Identities=15% Similarity=0.115 Sum_probs=187.9
Q ss_pred cEE-EEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCccc--HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 13 KTI-LVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDS--AALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 13 ~~I-lVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+| ||||||||||+||+++|+++| ++|++++|...... ..+.+. .........++++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g---~~V~~i~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 60 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNTGRIEHLY-----------------KNPQAHIEGNMKL 60 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTGGGC--------------------------CEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCc---CEEEEEECCCcccchhhHHHHh-----------------hchhhhccCCcEE
Confidence 567 999999999999999999999 56789988653211 111000 0001112368899
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhcc--CCceEEEEec
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCV--KLKVFVHVST 162 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~--~~~~~v~~SS 162 (399)
+.+|++ +.+....++. ++++|+|+|+.... .......+++|+.|+.+++++++++. +.++|||+||
T Consensus 61 ~~~Dl~-------d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS 133 (347)
T d1t2aa_ 61 HYGDLT-------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 133 (347)
T ss_dssp EECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred EEeecC-------CchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecc
Confidence 999999 4555555554 67899999987654 34566678999999999999999862 4468999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
++|||... +.+++|+++ ..|.+.|+.||.++|+++
T Consensus 134 ~~vyg~~~----~~~~~E~~~-----------------------------------------~~P~~~Yg~sK~~aE~~~ 168 (347)
T d1t2aa_ 134 SELYGKVQ----EIPQKETTP-----------------------------------------FYPRSPYGAAKLYAYWIV 168 (347)
T ss_dssp GGGTCSCS----SSSBCTTSC-----------------------------------------CCCCSHHHHHHHHHHHHH
T ss_pred hheecCCC----CCCCCCCCC-----------------------------------------CCCCCHHHHHHHHHHHHH
Confidence 99999643 233344332 244678999999999999
Q ss_pred HHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 243 QQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 243 ~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
+.+ ..+++++++||+.|||+...+.. ... .....+......+......+++.+.++++|++|+|++++.++....
T Consensus 169 ~~~~~~~~~~~~ilr~~~vyGp~~~~~~--~~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~ 245 (347)
T d1t2aa_ 169 VNFREAYNLFAVNGILFNHESPRRGANF--VTR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE 245 (347)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCTTS--HHH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred HHHHHHhCCCEEEEEecceeCCCCCCCc--ccc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC
Confidence 987 56899999999999998763211 110 1122233333444445566888999999999999999999998533
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 321 ~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
...|+++.. ...++.+....+...+++..
T Consensus 246 -----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 274 (347)
T d1t2aa_ 246 -----PEDFVIATG--EVHSVREFVEKSFLHIGKTI 274 (347)
T ss_dssp -----CCCEEECCS--CCEEHHHHHHHHHHHTTCCE
T ss_pred -----Cccceeccc--cccccchhhhhhhhhhccee
Confidence 245888887 67999999999999988743
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.97 E-value=5.7e-30 Score=248.48 Aligned_cols=283 Identities=17% Similarity=0.122 Sum_probs=192.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
..+||+|||||||||||++|+++|+++| ++|.+++|+..+.....+..+. ........
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G---~~V~~~vR~~~~~~~~~~~~~~-------------------~~~~~~~~ 65 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDA-------------------KYPGRFET 65 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHH-------------------HSTTTEEE
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCchhHHHHHHhhhc-------------------cccccccE
Confidence 3568999999999999999999999999 5668899975433222211110 01123445
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
++.+|+.+. +.+..++.++|+|+|+|+...+.......+..|+.++.+++++|.+.+.+++|||+||+++++.
T Consensus 66 ~~~~Dl~~~-------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~ 138 (342)
T d1y1pa1 66 AVVEDMLKQ-------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALI 138 (342)
T ss_dssp EECSCTTST-------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCC
T ss_pred EEeccccch-------hhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeecc
Confidence 688999953 3333567889999999999888888888899999999999999999767999999999865543
Q ss_pred cCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh---
Q 015874 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS--- 245 (399)
Q Consensus 169 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~--- 245 (399)
...........+..+ ..+ .+...-......+..+.+.|+.+|..+|++++.+
T Consensus 139 ~~~~~~~~~~~e~~~-~~~------------------------~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 193 (342)
T d1y1pa1 139 PKPNVEGIYLDEKSW-NLE------------------------SIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDE 193 (342)
T ss_dssp CCTTCCCCEECTTCC-CHH------------------------HHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccccccc-ccc------------------------cccccccccccCCCCCcCcccchhHhHHHHHHHhhhh
Confidence 221111111111110 111 1111111112222344568999999999988876
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
..+++++++||+.|||+...+.. .......++.....|...... .+.+.++|+|++|+|++++.+++... .
T Consensus 194 ~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~~~~-~-- 265 (342)
T d1y1pa1 194 NKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCLVLPQ-I-- 265 (342)
T ss_dssp HCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHHHCTT-C--
T ss_pred cccccccceecccceeCCCCCccc----cccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhhcCcc-c--
Confidence 34688999999999998653321 122344566666776644433 34456899999999999999987432 2
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
.+.|+++++ +++|+.|+++++.+.++...
T Consensus 266 -~g~~~~~~~--~~~t~~eia~~i~k~~p~~~ 294 (342)
T d1y1pa1 266 -ERRRVYGTA--GTFDWNTVLATFRKLYPSKT 294 (342)
T ss_dssp -CSCEEEECC--EEECHHHHHHHHHHHCTTSC
T ss_pred -cceEEEEcC--CceEHHHHHHHHHHHcCCCc
Confidence 334667777 77999999999999985443
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.4e-28 Score=238.30 Aligned_cols=266 Identities=17% Similarity=0.179 Sum_probs=188.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec------CCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA------ADI-DSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE 85 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~------~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
|+|||||||||||++|+++|+++|++| +++.|. ... ....+++.. ....
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V---~~ld~~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 58 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLP---VVIDNFHNAFRGGGSLPESLRRVQE---------------------LTGR 58 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCE---EEEECSSSSCBCSSSSBHHHHHHHH---------------------HHTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEE---EEEECCCccccccccchHHHHHHHH---------------------hcCC
Confidence 689999999999999999999999654 666432 111 112222221 1247
Q ss_pred ceEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 86 KITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 86 ~i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
++.++.+|++ +.+.++.... ++++++|+||..+.. .++...+++|+.++.++++++++. ++++|+++
T Consensus 59 ~~~~~~~Dl~-------d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 59 SVEFEEMDIL-------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCEEEECCTT-------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CcEEEEeecc-------ccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 8999999999 4555545443 578999999986542 456778999999999999999996 89999999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||+.+|+.......+... ....+.++|+.+|..+|+
T Consensus 131 ss~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~Y~~~k~~~e~ 166 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAH--------------------------------------------PTGGCTNPYGKSKFFIEE 166 (346)
T ss_dssp EEGGGGCSCSSSSBCTTS--------------------------------------------CCCCCSSHHHHHHHHHHH
T ss_pred ccceeeeccccccccccc--------------------------------------------cccccCChHHHHHHHHHH
Confidence 999999976532222111 112456789999999999
Q ss_pred HHHHh---hCCCcEEEEecCceecCCCCCCCCcc---cCcchHHHHHHHhh-cCcccccc------CCCccccCeeeHHH
Q 015874 241 LMQQS---KENLSLVIIRPTVVSGTYKEPFPGWV---EDLKTINTLFVASA-QGNLRCLV------GETKVIMDVIPVDM 307 (399)
Q Consensus 241 ~l~~~---~~~~~~~i~Rp~~V~G~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~v~D 307 (399)
.+..+ ..+++.+++|++.+||+......+.. .....+..++.... .+....+. .++.+.+||+|++|
T Consensus 167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D 246 (346)
T d1ek6a_ 167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246 (346)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEe
Confidence 99876 35899999999999998763221111 11112222233222 22222222 34667899999999
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
+|+++..++...... ..+++||++++ +++|+.|+++.+.+.+|....
T Consensus 247 ~a~~~~~~~~~~~~~-~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~~~~~ 293 (346)
T d1ek6a_ 247 LAKGHIAALRKLKEQ-CGCRIYNLGTG--TGYSVLQMVQAMEKASGKKIP 293 (346)
T ss_dssp HHHHHHHHHHHHTTT-CCEEEEEECCS--CCEEHHHHHHHHHHHHCSCCC
T ss_pred ccchhhhhccccccc-cCceEEEeCCC--CcccHHHHHHHHHHHhCCCCC
Confidence 999999877643322 22679999998 789999999999999997543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=6.1e-29 Score=244.50 Aligned_cols=283 Identities=13% Similarity=0.161 Sum_probs=191.2
Q ss_pred CcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEe---cCCcc---cHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVR---AADID---SAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R---~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+|+|||||||||||++|+++|+++ |+ .|+++.+ +.... ...+.....+ +...........
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~---~V~~~D~l~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 68 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARKL----------QQSDGPKPPWAD 68 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHHH----------HHSCSSCCTTTT
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCC---EEEEEecCCcccccchhhhhhhhHHHHh----------hhhccccccccc
Confidence 689999999999999999999974 64 4566643 22211 1111111100 111111122334
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v 158 (399)
..+.++.+|++ +.+.+.+++ +.+|+|+|+|+..... .......+.|+.++.++++++++. ++++++
T Consensus 69 ~~~~~~~~Di~-------d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~ 140 (383)
T d1gy8a_ 69 RYAALEVGDVR-------NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKII 140 (383)
T ss_dssp CCCEEEESCTT-------CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred cceEEEECccc-------CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccc
Confidence 67889999999 455555554 3689999999987543 456677889999999999999996 889999
Q ss_pred EEecceeecCcCC---ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 159 HVSTAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 159 ~~SS~~v~~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++||..+|+.... ...+.+..|+ .+..|.+.|+.+|
T Consensus 141 ~~~s~~~~~~~~~~~~~~~~~~~~e~-----------------------------------------~~~~p~~~Y~~sK 179 (383)
T d1gy8a_ 141 FSSSAAIFGNPTMGSVSTNAEPIDIN-----------------------------------------AKKSPESPYGESK 179 (383)
T ss_dssp EEEEGGGTBSCCC-----CCCCBCTT-----------------------------------------SCCBCSSHHHHHH
T ss_pred cccccccccccccccccccccccccc-----------------------------------------cCCCCCCHHHhhH
Confidence 9999999986542 1222223332 2335678899999
Q ss_pred HHHHHHHHHh--hCCCcEEEEecCceecCCCCCC-CCcccCcch-HHHHHHHhh----c------------Ccccccc--
Q 015874 236 TMGEMLMQQS--KENLSLVIIRPTVVSGTYKEPF-PGWVEDLKT-INTLFVASA----Q------------GNLRCLV-- 293 (399)
Q Consensus 236 ~~~E~~l~~~--~~~~~~~i~Rp~~V~G~~~~~~-~~~~~~~~~-~~~~~~~~~----~------------~~~~~~~-- 293 (399)
..+|++++.+ ..+++++++||+.|||+..... ..+...... ...++.+.. . +....+.
T Consensus 180 ~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 259 (383)
T d1gy8a_ 180 LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGT 259 (383)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECS
T ss_pred hHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCC
Confidence 9999999987 5699999999999999987432 111111111 111222211 1 1111121
Q ss_pred ----CCCccccCeeeHHHHHHHHHHHHHhccCC-----CCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 294 ----GETKVIMDVIPVDMVVNAMIVAMVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 294 ----~~~~~~~~~i~v~Dva~~i~~~~~~~~~~-----~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+++.+.+||+|++|+|++++.++...... ...+++||++++ +++|+.|+++.+.+.+|.....
T Consensus 260 ~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~~~ 331 (383)
T d1gy8a_ 260 DYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIPV 331 (383)
T ss_dssp CSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCCE
T ss_pred ccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCCce
Confidence 34678899999999999999998742211 112679999999 7899999999999999865443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=3.9e-28 Score=233.77 Aligned_cols=259 Identities=14% Similarity=0.087 Sum_probs=185.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc--cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID--SAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
|+|||||||||||+||+++|+++| ++|++++|..+.. .....+. ..........+.++
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 61 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNTQRINHIY-----------------IDPHNVNKALMKLH 61 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCCTTTTTTC-------------------------CCEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCc---CEEEEEECCCcccchhhhhhhh-----------------hhhhhccccceEEE
Confidence 789999999999999999999999 5679999865321 1110000 00011123678899
Q ss_pred eccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhc----cCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKC----VKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~----~~~~~~v~~S 161 (399)
.+|+++ .+.+...+ .++|+|||+||..... +.+...+..|+.++.+++++++.. ....++++.|
T Consensus 62 ~~Di~~-------~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~s 134 (339)
T d1n7ha_ 62 YADLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG 134 (339)
T ss_dssp ECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred EccccC-------HHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecc
Confidence 999994 44444444 3689999999987643 566778899999999999998764 1345788888
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|..+++.....++|+ . +..|.+.|+.+|..+|.+
T Consensus 135 s~~~~~~~~~~~~E~-----~-----------------------------------------~~~p~~~Y~~sK~~~E~~ 168 (339)
T d1n7ha_ 135 SSEMFGSTPPPQSET-----T-----------------------------------------PFHPRSPYAASKCAAHWY 168 (339)
T ss_dssp EGGGGTTSCSSBCTT-----S-----------------------------------------CCCCCSHHHHHHHHHHHH
T ss_pred cceecccCCCCCCCC-----C-----------------------------------------CCCCcchhhHHHHHHHHH
Confidence 888887665444443 2 224568899999999999
Q ss_pred HHHh--hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHh-hcCccccccCCCccccCeeeHHHHHHHHHHHHHh
Q 015874 242 MQQS--KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVA 318 (399)
Q Consensus 242 l~~~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~ 318 (399)
+..+ ..+++++++||++||||+..+ .+. ...+...+... ..+....+.+++.+.+|++|++|+|+++..++..
T Consensus 169 ~~~~~~~~~~~~~ilR~~~vyGp~~~~--~~~--~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~ 244 (339)
T d1n7ha_ 169 TVNYREAYGLFACNGILFNHESPRRGE--NFV--TRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ 244 (339)
T ss_dssp HHHHHHHHCCEEEEEEECCEECTTSCT--TSH--HHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCCEEEEEEccccCCCCCC--CCC--cchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhc
Confidence 9887 568999999999999987632 111 12222233333 3334445567889999999999999999999974
Q ss_pred ccCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccC
Q 015874 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (399)
Q Consensus 319 ~~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~ 355 (399)
.. ...+++..+ ...++.++++.+.+.++..
T Consensus 245 ~~-----~~~~~~~~~--~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 245 EK-----PDDYVVATE--EGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp SS-----CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred CC-----CCccccccc--cccccchhhhhhhhhhhcc
Confidence 32 235666666 6799999999999999864
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=4e-28 Score=231.72 Aligned_cols=252 Identities=12% Similarity=0.076 Sum_probs=180.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|+|||||||||||++|+++|+++|+.| .++.+.. .
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~v---i~~~~~~-----------------------------------------~ 37 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVE---LVLRTRD-----------------------------------------E 37 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEE---EECCCTT-----------------------------------------T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEE---EEecCch-----------------------------------------h
Confidence 4789999999999999999999999543 4332211 2
Q ss_pred ccCCCCCCCCCchhhHHHHh--cCccEEEEcccccCc----cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEeccee
Q 015874 92 GDISSEDLGLKDSNLKEELW--NELDIMVNSAAITKF----DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYV 165 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~--~~~D~Vih~Aa~~~~----~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v 165 (399)
.|+. +.+....++ .++|+|+|+|+.... ......++..|+.++.+++++|.+. ++++|||+||++|
T Consensus 38 ~~~~-------~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~v 109 (315)
T d1e6ua_ 38 LNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCI 109 (315)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG
T ss_pred cccc-------CHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceE
Confidence 3555 334443443 368999999987653 2456667889999999999999996 8999999999999
Q ss_pred ecCcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 166 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
||.... .++|+...+..+ ..+.+.|+.+|.++|++++.
T Consensus 110 yg~~~~~~~~E~~~~~~~~-----------------------------------------~~~~~~Y~~sK~~~E~~~~~ 148 (315)
T d1e6ua_ 110 YPKLAKQPMAESELLQGTL-----------------------------------------EPTNEPYAIAKIAGIKLCES 148 (315)
T ss_dssp SCTTCCSSBCGGGTTSSCC-----------------------------------------CGGGHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccCCccccCCC-----------------------------------------CCCCCHHHHHHHHHHHHHHH
Confidence 997542 445543332211 12234699999999999998
Q ss_pred h--hCCCcEEEEecCceecCCCCCCCCccc--CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhcc
Q 015874 245 S--KENLSLVIIRPTVVSGTYKEPFPGWVE--DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHA 320 (399)
Q Consensus 245 ~--~~~~~~~i~Rp~~V~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~ 320 (399)
+ +.+++++++||++||||+......... ..............+....+.+++.+.++++|++|+++++..++....
T Consensus 149 ~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~ 228 (315)
T d1e6ua_ 149 YNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228 (315)
T ss_dssp HHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCH
T ss_pred HHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhcc
Confidence 7 569999999999999988632211111 001112223344555666667888899999999999999999886421
Q ss_pred -----CCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 321 -----KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 321 -----~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
........++++.+ .+.++.++++.+.+..+.+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~i~~~~~~~~~i 269 (315)
T d1e6ua_ 229 EVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYKGRV 269 (315)
T ss_dssp HHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCCSEE
T ss_pred ccccccccccccccccCCC--cchHHHHHHHHHHHHhCCCcce
Confidence 11122568999998 7799999999999999876533
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.95 E-value=5.7e-27 Score=224.51 Aligned_cols=276 Identities=16% Similarity=0.156 Sum_probs=184.2
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|||||||||||+||+++|+++|+ +|+++.|-.... ..+++.. +. ...+++++.+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~---~V~~id~~~~~~-~~~~~~~----------~~----------~~~~~~~i~~D 57 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKG-ATDNLHW----------LS----------SLGNFEFVHGD 57 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTT-HHHHHHH----------HH----------TTCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCCccc-chhHHHH----------hh----------ccCCcEEEEcc
Confidence 799999999999999999999994 557765432221 2222111 00 13689999999
Q ss_pred CCCCCCCCCchhhHHHHhc--CccEEEEcccccCcc---ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 94 ISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKFD---ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~~---~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
+++ .+.+..+++ ++|+|||+|+..... .++...+++|+.||.+|++++.+. +++++++.||.++++.
T Consensus 58 i~~-------~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 58 IRN-------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYG 129 (338)
T ss_dssp TTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGT
T ss_pred cCC-------HHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 994 454545554 479999999987653 466788999999999999999997 6666666555544443
Q ss_pred c-CC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-
Q 015874 169 R-TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS- 245 (399)
Q Consensus 169 ~-~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~- 245 (399)
. .. ...+.......... +..........+.+.|+.+|...|.++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~ 179 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVDK------------------------------PNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179 (338)
T ss_dssp TCTTSCEEECSSCEEETTC------------------------------TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc------------------------------ccCcccCCccccccccccccchhhhhhhhhh
Confidence 3 21 11111000000000 000111122345678999999999998876
Q ss_pred -hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHh-----hcCccccccCCCccccCeeeHHHHHHHHHHHHHhc
Q 015874 246 -KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVAS-----AQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAH 319 (399)
Q Consensus 246 -~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~ 319 (399)
..+....++|++.+|++...... .. .....++... ..+....+++++.+.++++|++|+|++++.+++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~ 255 (338)
T d1orra_ 180 RIFGLNTVVFRHSSMYGGRQFATY-DQ---GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV 255 (338)
T ss_dssp HHHCCEEEEEEECCEECTTCCCBT-TB---CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH
T ss_pred hccCcccccccccceeeccccccc-cc---cccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc
Confidence 56899999999999987652211 11 1222233222 22455566788999999999999999999998743
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHhhccCCC
Q 015874 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (399)
Q Consensus 320 ~~~~~~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~ 357 (399)
.... +++||+..+...++++.|+++.+.+..+..+.
T Consensus 256 ~~~~--~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~ 291 (338)
T d1orra_ 256 SKIR--GNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR 291 (338)
T ss_dssp HHHT--TCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred cccc--CccccccccccccccHHHHHHHHHHHHCCCce
Confidence 3222 57899865544779999999999999986544
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.94 E-value=9.6e-26 Score=218.26 Aligned_cols=269 Identities=13% Similarity=0.126 Sum_probs=187.3
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+|++||+|||||||||||++|+++|+++| +.|+++.|.........+.. ....+
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g---~~V~~~~r~~~~~~~~~~~~----------------------~~~~~ 57 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPSLFETA----------------------RVADG 57 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSCHHHHT----------------------TTTTT
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCccHHHHhhh----------------------hcccC
Confidence 468999999999999999999999999999 56689998875432221100 01357
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
++++.+|+++ .+.+.++.. .+|+|+|+|+.... ...+.....+|+.++.++++++.+....+.+++.|
T Consensus 58 i~~~~~Dl~d-------~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s 130 (356)
T d1rkxa_ 58 MQSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130 (356)
T ss_dssp SEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CeEEEeeccC-------hHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence 9999999994 455445544 68999999998654 25667789999999999999999874555566666
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|..++..... +....++ .+..+.+.|+.+|..+|..
T Consensus 131 ~~~~~~~~~~---~~~~~~~-----------------------------------------~~~~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 131 SDKCYDNKEW---IWGYREN-----------------------------------------EAMGGYDPYSNSKGCAELV 166 (356)
T ss_dssp CGGGBCCCCS---SSCBCTT-----------------------------------------SCBCCSSHHHHHHHHHHHH
T ss_pred cccccccccc---ccccccc-----------------------------------------cccCCCCccccccccchhh
Confidence 6555544322 1111111 1224467899999999988
Q ss_pred HHHh-----------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 242 MQQS-----------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 242 l~~~-----------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+..+ ..++.++++||+.|||+++.+.. ..+..++.... +..+.+.+.+.+.++++|++|+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~------~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAFE-QSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHHH-TTCCEECSCTTCEECCEETHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh------HHHHHHHHHHh-CCCceEEeeccccccccccccccc
Confidence 8754 24688999999999998863221 22223344444 444555677888999999999999
Q ss_pred HHHHHHHhccCCCC-CCcEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 311 AMIVAMVAHAKQPS-DANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 311 ~i~~~~~~~~~~~~-~~~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+++.++........ .....+........+++.++++.+.+.++..+..
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 288 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW 288 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccE
Confidence 99988875332211 1223333332226699999999999999875433
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7e-25 Score=201.26 Aligned_cols=211 Identities=17% Similarity=0.138 Sum_probs=156.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|++|+|||||||||||++|+++|+++|. +++|++++|++...... ...++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~-~~~v~~~~R~~~~~~~~---------------------------~~~~i~~ 63 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGL-FSKVTLIGRRKLTFDEE---------------------------AYKNVNQ 63 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTC-CSEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-CCEEEEEecChhhhccc---------------------------ccceeee
Confidence 6778999999999999999999999983 35889999987543110 1257778
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
..+|+.+ .+.+...++++|+|||+|+..........+.++|+.++.+++++|++. ++++|||+||.+++...
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~ 135 (232)
T d2bkaa1 64 EVVDFEK-------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS 135 (232)
T ss_dssp EECCGGG-------GGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC
T ss_pred eeecccc-------cccccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccCc
Confidence 8889884 344446778999999999987666667778899999999999999996 89999999999876532
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
.+.|+.+|+.+|..+.+. ++
T Consensus 136 ----------------------------------------------------------~~~Y~~~K~~~E~~l~~~--~~ 155 (232)
T d2bkaa1 136 ----------------------------------------------------------NFLYLQVKGEVEAKVEEL--KF 155 (232)
T ss_dssp ----------------------------------------------------------SSHHHHHHHHHHHHHHTT--CC
T ss_pred ----------------------------------------------------------cchhHHHHHHhhhccccc--cc
Confidence 357999999999998874 55
Q ss_pred -cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcE
Q 015874 250 -SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 250 -~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
.++|+||+.|||+.... +....++..... .+ .........|+++|+|++++.++..... .+.
T Consensus 156 ~~~~IlRP~~i~G~~~~~--------~~~~~~~~~~~~----~~-~~~~~~~~~I~~~dvA~a~i~~~~~~~~----~~~ 218 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQES--------RPGEWLVRKFFG----SL-PDSWASGHSVPVVTVVRAMLNNVVRPRD----KQM 218 (232)
T ss_dssp SEEEEEECCEEECTTGGG--------SHHHHHHHHHHC----SC-CTTGGGGTEEEHHHHHHHHHHHHTSCCC----SSE
T ss_pred cceEEecCceeecCCCcC--------cHHHHHHHHHhh----cc-CCcccCCCeEEHHHHHHHHHHHHhcCcc----CCe
Confidence 48999999999987521 111122222222 11 2223445679999999999988863322 345
Q ss_pred EEecC
Q 015874 329 YHVGS 333 (399)
Q Consensus 329 yni~~ 333 (399)
+.+.+
T Consensus 219 ~i~~~ 223 (232)
T d2bkaa1 219 ELLEN 223 (232)
T ss_dssp EEEEH
T ss_pred EEEcH
Confidence 55543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.93 E-value=1.5e-24 Score=202.58 Aligned_cols=225 Identities=18% Similarity=0.174 Sum_probs=170.2
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|.++| +.|+++.|++ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g---~~Vi~~~r~~------------------------------------------~ 36 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKN---VEVIPTDVQD------------------------------------------L 36 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEeechh------------------------------------------c
Confidence 789999999999999999999999 4557765532 4
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|+. +.+.++++++ ++|+|||+|+.... ..........|+.....+.+.+.. ....++++||..+|+
T Consensus 37 D~~-------d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 37 DIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYS--VGAEIVQISTDYVFD 107 (281)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH--HTCEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccc--ccccccccccceeee
Confidence 666 4444445554 68999999997653 245566778888888888888877 456788899998888
Q ss_pred CcCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhh
Q 015874 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSK 246 (399)
Q Consensus 168 ~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~ 246 (399)
.... ...|.. +..+.+.|+.+|..+|.++++
T Consensus 108 ~~~~~~~~e~~----------------------------------------------~~~~~~~~~~~k~~~e~~~~~-- 139 (281)
T d1vl0a_ 108 GEAKEPITEFD----------------------------------------------EVNPQSAYGKTKLEGENFVKA-- 139 (281)
T ss_dssp SCCSSCBCTTS----------------------------------------------CCCCCSHHHHHHHHHHHHHHH--
T ss_pred ccccccccccc----------------------------------------------cccchhhhhhhhhHHHHHHHH--
Confidence 6542 222221 124457899999999999987
Q ss_pred CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCC
Q 015874 247 ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (399)
Q Consensus 247 ~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~ 326 (399)
.+.+.+++||+.|||+..+ ....++.....+....+.+ ++.++++|++|+|+++..+++... .
T Consensus 140 ~~~~~~i~R~~~vyG~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~-----~ 202 (281)
T d1vl0a_ 140 LNPKYYIVRTAWLYGDGNN----------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN-----Y 202 (281)
T ss_dssp HCSSEEEEEECSEESSSSC----------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC-----C
T ss_pred hCCCccccceeEEeCCCcc----------cccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc-----c
Confidence 4789999999999998752 2234455555555444444 478999999999999999997533 3
Q ss_pred cEEEecCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 327 ~~yni~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
++||++++ +++|+.|+++.+++.+|.+..+
T Consensus 203 g~~~~~~~--~~~s~~e~~~~i~~~~g~~~~i 232 (281)
T d1vl0a_ 203 GTFHCTCK--GICSWYDFAVEIFRLTGIDVKV 232 (281)
T ss_dssp EEEECCCB--SCEEHHHHHHHHHHHHCCCCEE
T ss_pred CceeEeCC--CccchHHHHHHHHHHhCCCceE
Confidence 58999999 7799999999999999976543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=4e-23 Score=194.28 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=154.8
Q ss_pred EEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEeccC
Q 015874 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGDI 94 (399)
Q Consensus 15 IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl 94 (399)
|||||||||||++|+++|+++|+. .|.++.+-.... ...+..+ .. ..|.
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~-~~~~~~~------------------------~~----~~~~ 50 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGT-KFVNLVD------------------------LN----IADY 50 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGG-GGHHHHT------------------------SC----CSEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcc-hhhcccc------------------------cc----hhhh
Confidence 899999999999999999999953 356653222211 1111110 11 1111
Q ss_pred CCCCCCCCchhhHHHH-----hcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecC
Q 015874 95 SSEDLGLKDSNLKEEL-----WNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (399)
Q Consensus 95 ~~~~~~~~~~~~~~~~-----~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~ 168 (399)
.+ ..+..... ...+++|+|.|+.... ..........|+.++.++++++... +++ +++.||..+++.
T Consensus 51 ~~------~~~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~ 122 (307)
T d1eq2a_ 51 MD------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGG 122 (307)
T ss_dssp EE------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTT
T ss_pred cc------chHHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccc
Confidence 11 11111121 2457999999987654 3456667788899999999999885 554 667666666654
Q ss_pred cCC-ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 169 ~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
... ...++ .+..+.+.|+.+|..+|.++..+
T Consensus 123 ~~~~~~~~~----------------------------------------------~~~~~~~~Y~~~K~~~e~~~~~~~~ 156 (307)
T d1eq2a_ 123 RTSDFIESR----------------------------------------------EYEKPLNVYGYSKFLFDEYVRQILP 156 (307)
T ss_dssp CCSCBCSSG----------------------------------------------GGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred ccccccccc----------------------------------------------cccccccccccccchhhhhcccccc
Confidence 432 11111 11245678999999999999988
Q ss_pred hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc-cCCCccccCeeeHHHHHHHHHHHHHhccCCCC
Q 015874 246 KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL-VGETKVIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (399)
Q Consensus 246 ~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~ 324 (399)
+.+++++++||+.|||+.... .+... .....+...+..+....+ .+++...++++|++|+++++..++....
T Consensus 157 ~~~~~~~~~r~~~vyGp~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~---- 229 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVYGPREGH-KGSMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---- 229 (307)
T ss_dssp GCSSCEEEEEECEEESSSCGG-GGGGS--CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC----
T ss_pred ccccccccccceeEeeccccc-ccccc--ccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc----
Confidence 678999999999999987732 11111 223344555666554444 4777889999999999999999887432
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHhhcc
Q 015874 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 325 ~~~~yni~~~~~~~~s~~el~~~l~~~~~~ 354 (399)
...||++++ .+.|+.|+++.+.+..++
T Consensus 230 -~~~~~~~~~--~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 230 -SGIFNLGTG--RAESFQAVADATLAYHKK 256 (307)
T ss_dssp -CEEEEESCS--CCBCHHHHHHHC------
T ss_pred -ccccccccc--cchhHHHHHHHHHHhcCC
Confidence 468999999 779999999999887664
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.90 E-value=4.5e-23 Score=194.38 Aligned_cols=243 Identities=11% Similarity=0.078 Sum_probs=171.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|||||||||||++|+++|+++|+ .|++++|+......... .. + ......++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~~~~~~-~~-------~-----------~~~~~~~v~~v~ 60 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGH---PTYVLFRPEVVSNIDKV-QM-------L-----------LYFKQLGAKLIE 60 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCSCCSSCHHHH-HH-------H-----------HHHHTTTCEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCCcccchhHH-HH-------H-----------hhhccCCcEEEE
Confidence 46799999999999999999999994 56899998755432211 00 0 001136789999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|+. +.+.....+.++++++|+++..... .|..++.++++++.+. ...++++.||.+++.....
T Consensus 61 ~d~~-------d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~ 124 (312)
T d1qyda_ 61 ASLD-------DHQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME 124 (312)
T ss_dssp CCSS-------CHHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC
T ss_pred eecc-------cchhhhhhccCcchhhhhhhhcccc--------cchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc
Confidence 9999 5566668888999999998764332 3445667888888886 6677888888766543211
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
.+..+...|..+|..++..... .++++
T Consensus 125 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (312)
T d1qyda_ 125 ---------------------------------------------------HALQPGSITFIDKRKVRRAIEA--ASIPY 151 (312)
T ss_dssp ---------------------------------------------------CCCSSTTHHHHHHHHHHHHHHH--TTCCB
T ss_pred ---------------------------------------------------cccchhhhhhHHHHHHHHhhcc--cccce
Confidence 1113345677777777776655 68999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEe
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni 331 (399)
+++||+.+||+.......+... ....+....+++++++.++++|++|+|++++.++....... ..+|++
T Consensus 152 ~i~r~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~--~~~~~~ 220 (312)
T d1qyda_ 152 TYVSSNMFAGYFAGSLAQLDGH---------MMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN--KTMYIR 220 (312)
T ss_dssp CEEECCEEHHHHTTTSSCTTCC---------SSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSS--SEEECC
T ss_pred EEeccceeecCCccchhhHHHH---------hhhcccccccccccccccceeeHHHHHHHHHHHhcCccccC--ceEEEe
Confidence 9999999999765332222111 11223445567888899999999999999999997433221 345677
Q ss_pred cCCCCCcccHHHHHHHHHHhhccCCCC
Q 015874 332 GSSLRNPVTLVSILDYGFVYFTKKPWI 358 (399)
Q Consensus 332 ~~~~~~~~s~~el~~~l~~~~~~~~~~ 358 (399)
+++ +.+|+.|+++.+++..|++...
T Consensus 221 ~~~--~~~s~~e~~~~~~~~~g~~~~~ 245 (312)
T d1qyda_ 221 PPM--NILSQKEVIQIWERLSEQNLDK 245 (312)
T ss_dssp CGG--GEEEHHHHHHHHHHHHTCCCEE
T ss_pred CCC--cCCCHHHHHHHHHHHHCCCCeE
Confidence 776 6799999999999999876533
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=9.4e-23 Score=183.30 Aligned_cols=203 Identities=12% Similarity=0.081 Sum_probs=151.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|.+|+|+||||||+||++++++|+++| ++|.+++|+..+... ....++++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g---~~V~~~~R~~~~~~~---------------------------~~~~~~~~ 50 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPS---------------------------EGPRPAHV 50 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSCS---------------------------SSCCCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEEcChhhccc---------------------------cccccccc
Confidence 467899999999999999999999999 567999998655311 12367899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~ 169 (399)
+.+|++ +.+.+.+.++++|+|||++|........ ..+..++.++++++++. ++++||++||.+++...
T Consensus 51 ~~gD~~-------d~~~l~~al~~~d~vi~~~g~~~~~~~~----~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 51 VVGDVL-------QAADVDKTVAGQDAVIVLLGTRNDLSPT----TVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDP 118 (205)
T ss_dssp EESCTT-------SHHHHHHHHTTCSEEEECCCCTTCCSCC----CHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCT
T ss_pred cccccc-------chhhHHHHhcCCCEEEEEeccCCchhhh----hhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCC
Confidence 999999 5566668889999999999875433222 34567899999999996 89999999999887754
Q ss_pred CCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC
Q 015874 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL 249 (399)
Q Consensus 170 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~ 249 (399)
... ......|...|..+|+++++ .++
T Consensus 119 ~~~----------------------------------------------------~~~~~~~~~~~~~~e~~l~~--~~~ 144 (205)
T d1hdoa_ 119 TKV----------------------------------------------------PPRLQAVTDDHIRMHKVLRE--SGL 144 (205)
T ss_dssp TCS----------------------------------------------------CGGGHHHHHHHHHHHHHHHH--TCS
T ss_pred ccc----------------------------------------------------cccccccchHHHHHHHHHHh--cCC
Confidence 310 01113588899999999887 689
Q ss_pred cEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEE
Q 015874 250 SLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (399)
Q Consensus 250 ~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~y 329 (399)
+++++||+.+++... .+ . ..+..++.....+|+.+|+|++++.+++.. ... ++.+
T Consensus 145 ~~tiirp~~~~~~~~---~~------------------~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~-~~~--g~~~ 199 (205)
T d1hdoa_ 145 KYVAVMPPHIGDQPL---TG------------------A-YTVTLDGRGPSRVISKHDLGHFMLRCLTTD-EYD--GHST 199 (205)
T ss_dssp EEEEECCSEEECCCC---CS------------------C-CEEESSSCSSCSEEEHHHHHHHHHHTTSCS-TTT--TCEE
T ss_pred ceEEEecceecCCCC---cc------------------c-EEEeeCCCCCCCcCCHHHHHHHHHHHhCCC-CCC--CEEE
Confidence 999999999987433 11 1 122344556778999999999999999743 222 5566
Q ss_pred EecC
Q 015874 330 HVGS 333 (399)
Q Consensus 330 ni~~ 333 (399)
.++.
T Consensus 200 ~~s~ 203 (205)
T d1hdoa_ 200 YPSH 203 (205)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 5543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.89 E-value=6.2e-23 Score=192.37 Aligned_cols=233 Identities=20% Similarity=0.168 Sum_probs=160.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|++.|.+.|+ .| ++.++.. .+.+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~---~v-~~~~~~~--------------------------------------~~~~ 38 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN---LI-ALDVHSK--------------------------------------EFCG 38 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE---EE-EECTTCS--------------------------------------SSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EE-EEECCCc--------------------------------------cccC
Confidence 7899999999999999999999883 23 3333221 1357
Q ss_pred cCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc---cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeec
Q 015874 93 DISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF---DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~ 167 (399)
|++ +.+.++.+++ ++|+|||+||.... ...+...+..|+.++.++++++++. ..+++++||..+|+
T Consensus 39 Dl~-------~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET--GAWVVHYSTDYVFP 109 (298)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT--TCEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc--cccccccccccccc
Confidence 888 4455555555 57999999997654 3566778899999999999999884 45788899998887
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhC
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKE 247 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~ 247 (399)
.... .+++|+. +..+.+.|+.+|..+|.++...
T Consensus 110 ~~~~----~~~~E~~-----------------------------------------~~~p~~~y~~~k~~~e~~~~~~-- 142 (298)
T d1n2sa_ 110 GTGD----IPWQETD-----------------------------------------ATSPLNVYGKTKLAGEKALQDN-- 142 (298)
T ss_dssp CCTT----CCBCTTS-----------------------------------------CCCCSSHHHHHHHHHHHHHHHH--
T ss_pred CCCC----CCCcccc-----------------------------------------ccCCCchHhhhhhhhhhhHHhh--
Confidence 5542 2222222 1245678999999999998875
Q ss_pred CCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCc
Q 015874 248 NLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (399)
Q Consensus 248 ~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~ 327 (399)
.....++|++..++.... .....+......+....+. +....+++|++|+++++..++..........+
T Consensus 143 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~ 211 (298)
T d1n2sa_ 143 CPKHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (298)
T ss_dssp CSSEEEEEECSEECSSSC---------CHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred hcccccccccceeeccCC---------ccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccc
Confidence 234566666666654331 1111222223333322332 34678999999999999988764222222268
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 328 ~yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+||++++ +.+++.++++.+.+..++..
T Consensus 212 ~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 238 (298)
T d1n2sa_ 212 LYHLVAG--GTTTWHDYAALVFDEARKAG 238 (298)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred cccccCC--CceecHHHHHHHHhhhhccC
Confidence 9999998 77999999999988876543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.89 E-value=2.1e-23 Score=195.14 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=165.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|+|||||||||||++++++|+++|+ +|++++|........++... +. .....+++++.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~---~V~~l~R~~~~~~~~~~~~~-------~~-----------~~~~~~~~~~~ 61 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQL-------LE-----------SFKASGANIVH 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCCCCTTTTHHHHHH-------HH-----------HHHTTTCEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEECCCccccchhHHHH-------HH-----------hhccCCcEEEE
Confidence 47899999999999999999999994 56999998765433222111 00 01135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
+|+. +.........+++.|+|+++.. +..++.+++++++.. ..+++++.||.+.......
T Consensus 62 ~d~~-------~~~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~ 121 (307)
T d1qyca_ 62 GSID-------DHASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVH 121 (307)
T ss_dssp CCTT-------CHHHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCC
T ss_pred eecc-------cchhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeecccccccccc
Confidence 9999 4555557778999999998763 233455677888876 7888888888654432210
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCcE
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLSL 251 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~~ 251 (399)
. ......+...+...+..+.+ .++++
T Consensus 122 ------~----------------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~ 147 (307)
T d1qyca_ 122 ------A----------------------------------------------VEPAKSVFEVKAKVRRAIEA--EGIPY 147 (307)
T ss_dssp ------C----------------------------------------------CTTHHHHHHHHHHHHHHHHH--HTCCB
T ss_pred ------c----------------------------------------------cccccccccccccccchhhc--cCCCc
Confidence 0 01123466666677776666 58999
Q ss_pred EEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEe
Q 015874 252 VIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (399)
Q Consensus 252 ~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni 331 (399)
+++||+.+||+....+..+.. ....+....+++.+++.++++|++|+|++++.++....... ..+|++
T Consensus 148 ~i~r~~~v~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~~~ 215 (307)
T d1qyca_ 148 TYVSSNCFAGYFLRSLAQAGL----------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN--KTLYLR 215 (307)
T ss_dssp EEEECCEEHHHHTTTTTCTTC----------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT--EEEECC
T ss_pred eecccceecCCCccchhhhhh----------hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcC--ceeEEe
Confidence 999999999977643222211 12333445566778899999999999999999987433322 345777
Q ss_pred cCCCCCcccHHHHHHHHHHhhccCC
Q 015874 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 332 ~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
+++ +.+|+.|+++.+.+..|.+.
T Consensus 216 ~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 216 LPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp CGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred CCC--CccCHHHHHHHHHHHHCCCC
Confidence 777 77999999999999999765
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=6.2e-23 Score=185.59 Aligned_cols=230 Identities=16% Similarity=0.102 Sum_probs=159.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|||||||||||++++++|+++|++| .|.+++|+..+.. . ...+++++.
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~~---~-------------------------~~~~~~~~~ 53 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKE---K-------------------------IGGEADVFI 53 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHHH---H-------------------------TTCCTTEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHHH---h-------------------------ccCCcEEEE
Confidence 4799999999999999999999999875 6777777653221 0 125788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc----------------cccHHHHHHHhHHHHHHHHHHHHhccCCc
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF----------------DERYDVAFGINTLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~----------------~~~~~~~~~~n~~~~~~ll~~a~~~~~~~ 155 (399)
+|++ +.+...+.++++|+|||+|+.... .........+|+.++.+++..+... ..+
T Consensus 54 ~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 125 (252)
T d2q46a1 54 GDIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVK 125 (252)
T ss_dssp CCTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCS
T ss_pred eeec-------cccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccc
Confidence 9999 555666888999999999986421 1234555778999999999998885 778
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
.+.+.|+..++..... . .......|...+
T Consensus 126 ~~~~~s~~~~~~~~~~------~---------------------------------------------~~~~~~~~~~~~ 154 (252)
T d2q46a1 126 HIVVVGSMGGTNPDHP------L---------------------------------------------NKLGNGNILVWK 154 (252)
T ss_dssp EEEEEEETTTTCTTCG------G---------------------------------------------GGGGGCCHHHHH
T ss_pred ccccccccccCCCCcc------c---------------------------------------------ccccccchhhhh
Confidence 8888887765543210 0 001123466666
Q ss_pred HHHHHHHHHhhCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 236 TMGEMLMQQSKENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 236 ~~~E~~l~~~~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
.+.+..... .+++++++||+.+||+.......+.. ....+ .....++||++|+|++++.+
T Consensus 155 ~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~---------------~~~~~---~~~~~~~i~~~Dva~a~~~~ 214 (252)
T d2q46a1 155 RKAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVG---------------KDDEL---LQTDTKTVPRADVAEVCIQA 214 (252)
T ss_dssp HHHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEE---------------STTGG---GGSSCCEEEHHHHHHHHHHH
T ss_pred hhhhhhhhc--ccccceeecceEEECCCcchhhhhhc---------------cCccc---ccCCCCeEEHHHHHHHHHHH
Confidence 666655554 78999999999999987633221111 11111 12346799999999999999
Q ss_pred HHhccCCCCCCcEEEecCCC-CCcccHHHHHHHHHHhh
Q 015874 316 MVAHAKQPSDANIYHVGSSL-RNPVTLVSILDYGFVYF 352 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~~-~~~~s~~el~~~l~~~~ 352 (399)
+.... .. +++||++++. ....++.++.+++.+..
T Consensus 215 l~~~~-~~--g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 215 LLFEE-AK--NKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp TTCGG-GT--TEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred hCCcc-cc--CcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 97432 22 6899998642 12356777766665543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=4.9e-22 Score=179.01 Aligned_cols=187 Identities=18% Similarity=0.132 Sum_probs=132.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|||||||||||++|+++|+++|+. .+|.+++|+.... ..++.....
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------------~~~~~~~~~ 50 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------------HPRLDNPVG 50 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------------CTTEECCBS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------------ccccccccc
Confidence 79999999999999999999999964 3677877765432 123333333
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcCC
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~~ 171 (399)
|+. +....+...+|+|||++|.... ......+.+.|+.++.+++++|++. ++++|+++||.++++..
T Consensus 51 d~~---------~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~-- 118 (212)
T d2a35a1 51 PLA---------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS-- 118 (212)
T ss_dssp CHH---------HHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC--
T ss_pred chh---------hhhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-ccccccccccccccccc--
Confidence 332 2222334568999999987643 3445677889999999999999996 89999999999876632
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCC-c
Q 015874 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENL-S 250 (399)
Q Consensus 172 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~-~ 250 (399)
.+.|..+|+.+|+.+.+ .++ +
T Consensus 119 --------------------------------------------------------~~~y~~~K~~~E~~l~~--~~~~~ 140 (212)
T d2a35a1 119 --------------------------------------------------------SIFYNRVKGELEQALQE--QGWPQ 140 (212)
T ss_dssp --------------------------------------------------------SSHHHHHHHHHHHHHTT--SCCSE
T ss_pred --------------------------------------------------------ccchhHHHHHHhhhccc--ccccc
Confidence 35799999999998876 355 5
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
++++||+.|||+......... + .....+.+ ...+..||++|+|++++.++.
T Consensus 141 ~~I~Rp~~v~G~~~~~~~~~~---------~---~~~~~~~~----~~~~~~i~v~DvA~ai~~~~~ 191 (212)
T d2a35a1 141 LTIARPSLLFGPREEFRLAEI---------L---AAPIARIL----PGKYHGIEACDLARALWRLAL 191 (212)
T ss_dssp EEEEECCSEESTTSCEEGGGG---------T---TCCCC--------CHHHHHHHHHHHHHHHHHHT
T ss_pred ceeeCCcceeCCcccccHHHH---------H---HHHHhhcc----CCCCcEEEHHHHHHHHHHHHc
Confidence 899999999998763210000 0 01011111 123456999999999999886
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.83 E-value=7.7e-20 Score=176.59 Aligned_cols=235 Identities=12% Similarity=0.022 Sum_probs=164.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.|+|+|||||||||++|+++|+++|+ .|++++|+...... ..+. ...+++++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~-~~~~-----------------------~~~~v~~~ 54 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGH---HVRAQVHSLKGLIA-EELQ-----------------------AIPNVTLF 54 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCSCSHHH-HHHH-----------------------TSTTEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCC---eEEEEECCcchhhh-hhhc-----------------------ccCCCEEE
Confidence 458999999999999999999999995 56999998765422 1111 13589999
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEecceeecCcC
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~SS~~v~~~~~ 170 (399)
.+|+.+ ..+.+..++..+|++++...... ..++..+.++++++.+. +++++++.||........
T Consensus 55 ~gD~~d------~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~ 118 (350)
T d1xgka_ 55 QGPLLN------NVPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG 118 (350)
T ss_dssp ESCCTT------CHHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS
T ss_pred EeeCCC------cHHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC
Confidence 999996 45566677888999888754321 13556778899999986 788888888875443211
Q ss_pred CccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHhhCCCc
Q 015874 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQSKENLS 250 (399)
Q Consensus 171 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~~~~~~ 250 (399)
......|..+|...|..+.+ .+++
T Consensus 119 ------------------------------------------------------~~~~~~~~~~k~~~~~~~~~--~~~~ 142 (350)
T d1xgka_ 119 ------------------------------------------------------PWPAVPMWAPKFTVENYVRQ--LGLP 142 (350)
T ss_dssp ------------------------------------------------------SCCCCTTTHHHHHHHHHHHT--SSSC
T ss_pred ------------------------------------------------------cccchhhhhhHHHHHHHHHh--hccC
Confidence 02235688899998888776 5789
Q ss_pred EEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccc-cccCCCccccCeeeH-HHHHHHHHHHHHhccCCCCCCcE
Q 015874 251 LVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLR-CLVGETKVIMDVIPV-DMVVNAMIVAMVAHAKQPSDANI 328 (399)
Q Consensus 251 ~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v-~Dva~~i~~~~~~~~~~~~~~~~ 328 (399)
++++|++..++............. ....+... ..+.+++..++++++ +|+++++..++...+... .++.
T Consensus 143 ~~~vr~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~-~G~~ 213 (350)
T d1xgka_ 143 STFVYAGIYNNNFTSLPYPLFQME--------LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW-NGHR 213 (350)
T ss_dssp EEEEEECEEGGGCBSSSCSSCBEE--------ECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH-TTCE
T ss_pred ceeeeeceeecccccccccccccc--------ccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhc-CCeE
Confidence 999999998875442221111100 00111111 233456677888886 799999999886432211 1678
Q ss_pred EEecCCCCCcccHHHHHHHHHHhhccCC
Q 015874 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (399)
Q Consensus 329 yni~~~~~~~~s~~el~~~l~~~~~~~~ 356 (399)
|+++++ .+|+.|+++.+++.+|++.
T Consensus 214 ~~~~g~---~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 214 IALTFE---TLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp EEECSE---EECHHHHHHHHHHHHTSCE
T ss_pred EEEeCC---cCCHHHHHHHHHHHHCCcc
Confidence 999874 4999999999999999864
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.78 E-value=2.6e-18 Score=159.41 Aligned_cols=226 Identities=13% Similarity=0.061 Sum_probs=152.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
|.++||+||||||++.||.++++.|+++| .+|.+..|+.++. +...++ .+.++
T Consensus 1 ndL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~---~~~~~~---------------------~~~~~ 53 (254)
T d1hdca_ 1 NDLSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLDEEG---AATARE---------------------LGDAA 53 (254)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHT---------------------TGGGE
T ss_pred CCCCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------------------hCCce
Confidence 45899999999999999999999999999 5668888875432 222211 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++
T Consensus 54 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~I 133 (254)
T d1hdca_ 54 RYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSI 133 (254)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCee
Confidence 899999997554222222222334579999999997532 2578889999999999999887653 356799
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.+|..
T Consensus 134 I~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 157 (254)
T d1hdca_ 134 VNISSAAGLMGL--------------------------------------------------------ALTSSYGASKWG 157 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred cccccchhcccc--------------------------------------------------------cchhhHHHHHHH
Confidence 999998643321 223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..+.||.|..+.. ................-.+-....+|+|+++
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~-----------------~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v 220 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----------------AETGIRQGEGNYPNTPMGRVGNEPGEIAGAV 220 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------------HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCccc-----------------hhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99998866 5689999999998865321 1111000001100000011113468999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... --.|.++.+.++
T Consensus 221 ~fL~S~~a~-~itG~~i~vDGG 241 (254)
T d1hdca_ 221 VKLLSDTSS-YVTGAELAVDGG 241 (254)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhchhhC-CCCCceEEeCCC
Confidence 998863322 223789999887
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.78 E-value=2e-18 Score=159.32 Aligned_cols=219 Identities=15% Similarity=0.109 Sum_probs=153.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||+++++.|+++| .+|.+..|+.++. +...+++ ..++.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~---~~~~~~~---------------------~~~~~ 55 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILDEEG---KAMAAEL---------------------ADAAR 55 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHT---------------------GGGEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHh---------------------hCcce
Confidence 3789999999999999999999999999 5568888875432 2222221 25788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+.+.+. ++..++|
T Consensus 56 ~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 135 (244)
T d1nffa_ 56 YVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII 135 (244)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEE
Confidence 89999997654222223333344579999999997642 3678899999999999999866542 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|+..
T Consensus 136 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 159 (244)
T d1nffa_ 136 NISSIEGLAGT--------------------------------------------------------VACHGYTATKFAV 159 (244)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred ecccccccccc--------------------------------------------------------ccccchhhHHHHH
Confidence 99998643321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|-.+..+..+. ..... ...-+...+|+|+++.
T Consensus 160 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------------------~~~~~-----pl~R~~~p~diA~~v~ 216 (244)
T d1nffa_ 160 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------------------DIFQT-----ALGRAAEPVEVSNLVV 216 (244)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------------------TCSCC-----SSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------------------HHHhc-----cccCCCCHHHHHHHHH
Confidence 9998866 568999999999887644311110 00000 1123677899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... .--.|..+.+.++
T Consensus 217 fL~s~~s-~~itG~~i~vDGG 236 (244)
T d1nffa_ 217 YLASDES-SYSTGAEFVVDGG 236 (244)
T ss_dssp HHHSGGG-TTCCSCEEEESTT
T ss_pred HHhChhh-CCCcCCEEEECCC
Confidence 9886332 2223788888776
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.77 E-value=5e-18 Score=158.12 Aligned_cols=231 Identities=12% Similarity=0.072 Sum_probs=153.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+++||||++.||.++++.|+++| .+|.+..|+.+. .++...+++. ..+.++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G---~~Vv~~~r~~~~--~~~~~~~~~~------------------~~g~~~ 59 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKED--EANSVLEEIK------------------KVGGEA 59 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------------HTTCEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHHHH------------------hcCCcE
Confidence 46899999999999999999999999999 566888887532 1222222210 013578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC-Cce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK-LKV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~-~~~ 156 (399)
.++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++ ...
T Consensus 60 ~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~ 139 (261)
T d1geea_ 60 IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGT 139 (261)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccccc
Confidence 899999997654222223322334579999999997642 2578889999999999998876552 23 345
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
++++||.+..... .....|+.+|.
T Consensus 140 Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 163 (261)
T d1geea_ 140 VINMSSVHEKIPW--------------------------------------------------------PLFVHYAASKG 163 (261)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred ccccccchhcccC--------------------------------------------------------ccccccccCCc
Confidence 8889987543211 22357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
..+.+.+.. ..|+++..+.||.|-.+.. ............... . . ...-+...+|+|++
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-------~~~~~~~~~~~~~~~-~---~-----pl~R~~~pediA~~ 227 (261)
T d1geea_ 164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPIN-------AEKFADPEQRADVES-M---I-----PMGYIGEPEEIAAV 227 (261)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG-------HHHHHSHHHHHHHHT-T---C-----TTSSCBCHHHHHHH
T ss_pred cchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH-------hhhcCCHHHHHHHHh-c---C-----CCCCCCCHHHHHHH
Confidence 999998866 5689999999999866432 000000011111111 1 1 11225567999999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+..++.... .--.|..+.+.++
T Consensus 228 v~fL~S~~s-~~itG~~i~vDGG 249 (261)
T d1geea_ 228 AAWLASSEA-SYVTGITLFADGG 249 (261)
T ss_dssp HHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCCcCCeEEECCC
Confidence 998886332 2223789999887
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.77 E-value=6.8e-18 Score=155.93 Aligned_cols=227 Identities=14% Similarity=0.086 Sum_probs=149.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.|+||+++||||++.||+++++.|+++| .+|.+..|++.+. .+...++ .+.++.
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~--~~~~~~~---------------------~g~~~~ 55 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPAPE--AEAAIRN---------------------LGRRVL 55 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCHH--HHHHHHH---------------------TTCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH--HHHHHHH---------------------cCCcEE
Confidence 4789999999999999999999999999 5567777876432 1111111 246889
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+.....+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|
T Consensus 56 ~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv 135 (247)
T d2ew8a1 56 TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII 135 (247)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCcc
Confidence 99999997654222222222345679999999997542 2678899999999999999887653 3457899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 136 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 159 (247)
T d2ew8a1 136 NLTSTTYWLKI--------------------------------------------------------EAYTHYISTKAAN 159 (247)
T ss_dssp EECCGGGGSCC--------------------------------------------------------SSCHHHHHHHHHH
T ss_pred ccccchhcccC--------------------------------------------------------cccccchhhhccH
Confidence 99998643211 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|-.+..+... .. ..... .........-+...+|+|++++
T Consensus 160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~-----~~~~~--------~~~~~~~l~r~~~pedvA~~v~ 223 (247)
T d2ew8a1 160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASA---LS-----AMFDV--------LPNMLQAIPRLQVPLDLTGAAA 223 (247)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCSCCCTHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc---cc-----hhHHH--------HHHHhccCCCCCCHHHHHHHHH
Confidence 9988766 56899999999998765431100 00 00000 0000011112455689999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... --.|..+.+.++
T Consensus 224 fL~S~~s~-~itG~~i~vDGG 243 (247)
T d2ew8a1 224 FLASDDAS-FITGQTLAVDGG 243 (247)
T ss_dssp HHTSGGGT-TCCSCEEEESSS
T ss_pred HHhCchhc-CCcCCeEEECCC
Confidence 88863322 223788888876
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=4.9e-18 Score=155.97 Aligned_cols=216 Identities=13% Similarity=0.139 Sum_probs=150.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||++.||.++++.|+++| .+|.+..|+.+.. .++.
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~G---a~V~~~~r~~~~~--------------------------------~~~~ 48 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------------KGLF 48 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------------TTSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcchh--------------------------------cCce
Confidence 4789999999999999999999999999 5668888887653 5677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
.+++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+.+.+. ++..++|
T Consensus 49 ~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv 128 (237)
T d1uzma1 49 GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 128 (237)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceE
Confidence 89999997654222223333344579999999997532 3678889999999999998866543 3556899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 152 (237)
T d1uzma1 129 FIGSVSGLWGI--------------------------------------------------------GNQANYAASKAGV 152 (237)
T ss_dssp EECCCCC-------------------------------------------------------------CCHHHHHHHHHH
T ss_pred EEcchhhccCC--------------------------------------------------------cccHHHHHHHHHH
Confidence 99998654321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|..+.... +.+ ........ ..+ ..-+...+|+|+++.
T Consensus 153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~---~~~------~~~~~~~~----~~p-----l~R~~~pedvA~~v~ 214 (237)
T d1uzma1 153 IGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDE------RIQQGALQ----FIP-----AKRVGTPAEVAGVVS 214 (237)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---SCH------HHHHHHGG----GCT-----TCSCBCHHHHHHHHH
T ss_pred HHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc---cCH------HHHHHHHh----cCC-----CCCCcCHHHHHHHHH
Confidence 9988765 578999999999986643211 000 11111111 111 123567899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... --.|.++.+.++
T Consensus 215 fL~S~~s~-~itG~~i~vdGG 234 (237)
T d1uzma1 215 FLASEDAS-YISGAVIPVDGG 234 (237)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCchhc-CCcCCeEEECCC
Confidence 98863322 223788888776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=2.3e-18 Score=158.78 Aligned_cols=223 Identities=13% Similarity=0.105 Sum_probs=153.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+++||||++.||+++++.|+++| .+|.+..|+++.. +.+.+++ +.+..+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G---~~Vv~~~r~~~~l---~~~~~~~---------------------~~~~~~ 54 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARG---AKVIGTATSENGA---QAISDYL---------------------GANGKG 54 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHH---HHHHHHH---------------------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHH---HHHHHHh---------------------CCCCcE
Confidence 689999999999999999999999999 5567788865432 2222222 256788
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. ++..++|+
T Consensus 55 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~ 134 (243)
T d1q7ba_ 55 LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT 134 (243)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeee
Confidence 9999997554222223332334579999999987532 3678889999999999999887653 34578999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 135 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 158 (243)
T d1q7ba_ 135 IGSVVGTMGN--------------------------------------------------------GGQANYAAAKAGLI 158 (243)
T ss_dssp ECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ecchhhcCCC--------------------------------------------------------CCCHHHHHHHHHHH
Confidence 9998644321 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..+.||.|-.+.... +.. ........ . . ...-+...+|+|+++..
T Consensus 159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~---~~~------~~~~~~~~-~---~-----pl~R~~~pedvA~~v~f 220 (243)
T d1q7ba_ 159 GFSKSLAREVASRGITVNVVAPGFIETDMTRA---LSD------DQRAGILA-Q---V-----PAGRLGGAQEIANAVAF 220 (243)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCH------HHHHHHHT-T---C-----TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCccCeEEEEEecceEechhhhh---hhh------hHHHHHHh-c---C-----CCCCCCCHHHHHHHHHH
Confidence 998866 568999999999886532211 000 11111111 1 1 11235678999999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.... ..-.|..+.+.++
T Consensus 221 L~S~~s-~~itGq~i~vdGG 239 (243)
T d1q7ba_ 221 LASDEA-AYITGETLHVNGG 239 (243)
T ss_dssp HHSGGG-TTCCSCEEEESTT
T ss_pred HhCchh-cCCcCCeEEECCC
Confidence 886332 2223788988876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=3.1e-18 Score=159.02 Aligned_cols=228 Identities=15% Similarity=0.117 Sum_probs=154.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||.+++++|+++| .+|.+..|+.++. ++..+++.+ .+.++.
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~~---~~~~~~l~~------------------~g~~~~ 63 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAA---NHVVDEIQQ------------------LGGQAF 63 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHHH---HHHHHHHHH------------------TTCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHH------------------cCCcEE
Confidence 3789999999999999999999999999 5568888865432 222222210 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+.+.+. ++..++|+
T Consensus 64 ~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~ 143 (255)
T d1fmca_ 64 ACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccc
Confidence 99999997654222233333445679999999997532 3578889999999999998876553 24557889
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..... .....|+.+|...+
T Consensus 144 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 144 ITSMAAENKN--------------------------------------------------------INMTSYASSKAAAS 167 (255)
T ss_dssp ECCGGGTCCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred ccccchhccc--------------------------------------------------------cccccchhHHHHHH
Confidence 9987543321 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..+.||.|-.+.... ... .......... .+ ..-+...+|+|+++..
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~---~~~-----~e~~~~~~~~----~p-----l~R~g~pedvA~~v~f 230 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VIT-----PEIEQKMLQH----TP-----IRRLGQPQDIANAALF 230 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCC-----HHHHHHHHHT----CS-----SCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCccCeEEEEeeeCcCcChHhhc---cCC-----HHHHHHHHhc----CC-----CCCCcCHHHHHHHHHH
Confidence 998866 568999999999986643210 000 0111222111 11 1124567899999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.... .--.|..+.+.++
T Consensus 231 L~S~~s-~~itG~~i~vDGG 249 (255)
T d1fmca_ 231 LCSPAA-SWVSGQILTVSGG 249 (255)
T ss_dssp HHSGGG-TTCCSCEEEESTT
T ss_pred HhCchh-cCCcCCEEEECcC
Confidence 886322 2223788989887
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.76 E-value=1e-17 Score=155.10 Aligned_cols=230 Identities=14% Similarity=0.085 Sum_probs=152.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||++|||||++.||+++++.|+++| .+|.+..|+.++... ..+++ .+. .+.++.+
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~---~~~~l---------~~~--------~g~~~~~ 59 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEEASE---AAQKL---------TEK--------YGVETMA 59 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHH---HHHHH---------HHH--------HCCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHH---HHHHH---------HHH--------hCCcEEE
Confidence 789999999999999999999999999 566888887644321 11111 111 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|+
T Consensus 60 ~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~ 139 (251)
T d1vl8a_ 60 FRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIIN 139 (251)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccc
Confidence 9999997654222223333334579999999997532 3678889999999999999987653 23468999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... ......|+.+|...+
T Consensus 140 i~S~~~~~~~-------------------------------------------------------~~~~~~Y~asKaal~ 164 (251)
T d1vl8a_ 140 IGSLTVEEVT-------------------------------------------------------MPNISAYAASKGGVA 164 (251)
T ss_dssp ECCGGGTCCC-------------------------------------------------------SSSCHHHHHHHHHHH
T ss_pred cccchhcccc-------------------------------------------------------CccccchHHHHHhHH
Confidence 9886432110 011357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..+.||.|-.+.... .... ........... + ..-+...+|+|++++.
T Consensus 165 ~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~---~~~~----~~~~~~~~~~~----p-----l~R~~~pedvA~~v~f 228 (251)
T d1vl8a_ 165 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFSD----PEKLDYMLKRI----P-----LGRTGVPEDLKGVAVF 228 (251)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHTC----HHHHHHHHHTC----T-----TSSCBCGGGGHHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEeeCcccCHHHHh---ccCC----HHHHHHHHhcC----C-----CCCCCCHHHHHHHHHH
Confidence 998866 568999999999987654310 0000 01112221111 1 1123456799999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.... .--.|..+.+.++
T Consensus 229 L~S~~a-~~itG~~i~vDGG 247 (251)
T d1vl8a_ 229 LASEEA-KYVTGQIIFVDGG 247 (251)
T ss_dssp HHSGGG-TTCCSCEEEESTT
T ss_pred HhCchh-CCCcCcEEEeCcC
Confidence 886332 2223788888876
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.76 E-value=9e-18 Score=155.23 Aligned_cols=227 Identities=14% Similarity=0.068 Sum_probs=150.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+||||||++.||.++++.|+++| .+|.+..|+++..+. .++ .+..
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~----~~~-----------------------~~~~ 51 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEGKEV----AEA-----------------------IGGA 51 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTHHHH----HHH-----------------------HTCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHH----HHH-----------------------cCCe
Confidence 4789999999999999999999999999 566888887654221 111 2456
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++++|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++.++.+++.+. ++..++|
T Consensus 52 ~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii 131 (248)
T d2d1ya1 52 FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV 131 (248)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccc
Confidence 78999997554222222333345679999999997532 2568889999999999999988663 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||...+... .....|+.+|+..
T Consensus 132 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 155 (248)
T d2d1ya1 132 NVASVQGLFAE--------------------------------------------------------QENAAYNASKGGL 155 (248)
T ss_dssp EECCGGGTSBC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred ccccccccccc--------------------------------------------------------cccchhHHHHHHH
Confidence 99988654321 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|-.+.... ................ +.....-+...+|+|+++.
T Consensus 156 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~~~---------~~~pl~R~~~pedia~~v~ 223 (248)
T d2d1ya1 156 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPDPERTRRDWE---------DLHALRRLGKPEEVAEAVL 223 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC--------CHHHH---------TTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHH---HhhcCCCHHHHHHHHH---------hcCCCCCCcCHHHHHHHHH
Confidence 9988765 568999999999886532100 0000000000000000 0011223566899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... --.|..+.+.++
T Consensus 224 fL~S~~s~-~itG~~i~vDGG 243 (248)
T d2d1ya1 224 FLASEKAS-FITGAILPVDGG 243 (248)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCchhc-CCCCcEEEcCcC
Confidence 88863322 223788999887
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.76 E-value=4.9e-18 Score=157.28 Aligned_cols=228 Identities=14% Similarity=0.150 Sum_probs=152.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
|.++||++|||||++.||.++++.|+++| .+|.+..|+.+.. +...+++ . ...++
T Consensus 2 nrL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~---~~~~~~~-------------~------~~~~~ 56 (251)
T d1zk4a1 2 NRLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSDVG---EKAAKSV-------------G------TPDQI 56 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH-------------C------CTTTE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHh-------------C------CCCcE
Confidence 45899999999999999999999999999 5568888865432 2222221 1 13578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-c--CC-ce
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-V--KL-KV 156 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~--~~-~~ 156 (399)
.++.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. . +. .+
T Consensus 57 ~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~ 136 (251)
T d1zk4a1 57 QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136 (251)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCc
Confidence 899999997654332333333445679999999997532 3568889999999999999987653 2 22 37
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||....... +....|+.+|.
T Consensus 137 Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 160 (251)
T d1zk4a1 137 IINMSSIEGFVGD--------------------------------------------------------PSLGAYNASKG 160 (251)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred eEeeeccceeccC--------------------------------------------------------CCchhHHHHHH
Confidence 8999987543211 12357999999
Q ss_pred HHHHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 237 MGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 237 ~~E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
..+.+.+.. ..|+++..+.||.|-.+.....+ . ......... .. ...-+...+|+|
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~---~-----~~~~~~~~~----~~-----pl~R~~~pedvA 223 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---G-----AEEAMSQRT----KT-----PMGHIGEPNDIA 223 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---T-----HHHHHTSTT----TC-----TTSSCBCHHHHH
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC---C-----HHHHHHHHh----CC-----CCCCCcCHHHHH
Confidence 998887643 35799999999998654321100 0 000100000 11 112356789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++.... .--.|..+.+.++
T Consensus 224 ~~v~fL~S~~s-~~itG~~i~vDGG 247 (251)
T d1zk4a1 224 YICVYLASNES-KFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhCchh-CCCcCcEEEECcc
Confidence 99999886332 2223788888876
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.75 E-value=8.3e-18 Score=156.44 Aligned_cols=239 Identities=15% Similarity=0.118 Sum_probs=151.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+||++|||||++.||.++++.|+++| .+|.+..|+... .++...+++. + ..+.++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~G---a~V~~~~r~~~~--~~~~~~~~~~---------~--------~~g~~~~~ 59 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA--EIEKVRAGLA---------A--------QHGVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH--HHHHHHHHHH---------H--------HHTSCEEE
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHHHH---------H--------hcCCcEEE
Confidence 689999999999999999999999999 556777776432 2222222211 1 11368899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|+
T Consensus 60 ~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~ 139 (260)
T d1x1ta1 60 DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEee
Confidence 9999997654222222233344679999999997532 3678889999999999998877653 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 140 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 163 (260)
T d1x1ta1 140 IASAHGLVAS--------------------------------------------------------ANKSAYVAAKHGVV 163 (260)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred cccccceecc--------------------------------------------------------CCcchhhhhhhhHH
Confidence 9998643321 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCC-CcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+.+.. ..|+++..+.||.|-.+...... ..... .... ...... ..........-+...+|+|+++.
T Consensus 164 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~--~~~~~~----~~~~~~~Pl~R~g~pediA~~v~ 236 (260)
T d1x1ta1 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVD--QETAAR----ELLSEKQPSLQFVTPEQLGGTAV 236 (260)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CHHHHCTTCCCBCHHHHHHHHH
T ss_pred HhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh-cCCC--hHHHHH----HHHHhcCCCCCCcCHHHHHHHHH
Confidence 998866 56899999999998765431100 00000 0000 000000 00000001123567899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... --.|..+.+.++
T Consensus 237 fL~S~~a~-~itG~~i~vDGG 256 (260)
T d1x1ta1 237 FLASDAAA-QITGTTVSVDGG 256 (260)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhChhhC-CCcCCEEEECcc
Confidence 98863322 223788888876
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.75 E-value=4.6e-18 Score=157.89 Aligned_cols=232 Identities=17% Similarity=0.201 Sum_probs=152.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||++|||||++.||.++++.|+++| .+|.+..|+.+. ++...+++ +.++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~---l~~~~~~~---------------------~~~~~~ 55 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREG---ARVAIADINLEA---ARATAAEI---------------------GPAACA 55 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTT---EEEEEEESCHHH---HHHHHHHH---------------------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh---------------------CCceEE
Confidence 789999999999999999999999999 566888876533 22222222 367889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~---~~~~~~v 158 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.. + ++..++|
T Consensus 56 ~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv 135 (256)
T d1k2wa_ 56 IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKII 135 (256)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccc
Confidence 9999997654332233333344679999999997542 267888999999999999886543 2 2346899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+..... .....|+.+|...
T Consensus 136 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 159 (256)
T d1k2wa_ 136 NMASQAGRRGE--------------------------------------------------------ALVGVYCATKAAV 159 (256)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred cccchhhcccc--------------------------------------------------------ccccchhhhhhHH
Confidence 99998643321 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCC-cccCcch-HHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPG-WVEDLKT-INTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.. ..|+++..+.||.|-.+....... +...... .......... .. ...-+...+|+|++
T Consensus 160 ~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----PlgR~~~p~evA~~ 230 (256)
T d1k2wa_ 160 ISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGA----AV-----PFGRMGRAEDLTGM 230 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHH----HS-----TTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHh----cC-----CCCCCcCHHHHHHH
Confidence 9998766 568999999999887754210000 0000000 0000000000 00 11235667899999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++.... .--.|..+.+.++
T Consensus 231 v~fL~S~~a-~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 231 AIFLATPEA-DYIVAQTYNVDGG 252 (256)
T ss_dssp HHHTTSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-CCccCceEEECcc
Confidence 998875332 2223788888887
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.74 E-value=5.2e-18 Score=157.08 Aligned_cols=227 Identities=14% Similarity=0.103 Sum_probs=153.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||.++++.|+++| .+|.+..|+.+.. +...+++. ..+.++.
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~G---a~V~~~~r~~~~l---~~~~~~l~------------------~~g~~~~ 62 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKSC---DSVVDEIK------------------SFGYESS 62 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHHH---HHHHHHHH------------------TTTCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHH---HHHHHHHH------------------hcCCcEE
Confidence 4789999999999999999999999999 5668888865432 22222220 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. ++..++|
T Consensus 63 ~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IV 142 (251)
T d2c07a1 63 GYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 142 (251)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEE
Confidence 99999997553222222233344679999999997532 2678889999999999998876543 3557899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 143 nisS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 166 (251)
T d2c07a1 143 NISSIVGLTGN--------------------------------------------------------VGQANYSSSKAGV 166 (251)
T ss_dssp EECCTHHHHCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCHHhcCCC--------------------------------------------------------CCCHHHHHHHHHH
Confidence 99998643321 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|-.+.... +.+ ......... .+ ..-+...+|+|+++.
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~---~~~------~~~~~~~~~----~p-----l~R~~~pedvA~~v~ 228 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISE------QIKKNIISN----IP-----AGRMGTPEEVANLAC 228 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCH------HHHHHHHTT----CT-----TSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCEecccccc---cCH------HHHHHHHhc----CC-----CCCCcCHHHHHHHHH
Confidence 9999866 568999999999997654311 111 112222221 11 112567889999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++..... --.|.++.+.++
T Consensus 229 fL~S~~s~-~itG~~i~vDGG 248 (251)
T d2c07a1 229 FLSSDKSG-YINGRVFVIDGG 248 (251)
T ss_dssp HHHSGGGT-TCCSCEEEESTT
T ss_pred HHhCchhC-CCcCcEEEECCC
Confidence 88863322 223778888776
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=1.3e-17 Score=153.48 Aligned_cols=220 Identities=13% Similarity=0.074 Sum_probs=149.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+++||||++.||.++++.|+++| .+|.+..|+++.. ++..+ ..+.++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G---~~V~~~~r~~~~l---~~~~~-----------------------~~~~~~ 53 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEEGPL---REAAE-----------------------AVGAHP 53 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHH-----------------------TTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHH-----------------------HcCCeE
Confidence 789999999999999999999999999 5668888865332 22221 135678
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++...++.
T Consensus 54 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~ 133 (242)
T d1ulsa_ 54 VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL 133 (242)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeee
Confidence 9999997654222222222334579999999997532 2578889999999999999887663 23445666
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..+. .....|+.+|...+
T Consensus 134 ~ss~~~~~~---------------------------------------------------------~~~~~Y~asKaal~ 156 (242)
T d1ulsa_ 134 TASRVYLGN---------------------------------------------------------LGQANYAASMAGVV 156 (242)
T ss_dssp ECCGGGGCC---------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred eccccccCC---------------------------------------------------------CCCcchHHHHHHHH
Confidence 666542221 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..+.||.|-.+.....+ + ......... . ...-+...+|+|+++..
T Consensus 157 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---~------~~~~~~~~~----~-----pl~R~~~pedia~~v~f 218 (242)
T d1ulsa_ 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---E------KVREKAIAA----T-----PLGRAGKPLEVAYAALF 218 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---H------HHHHHHHHT----C-----TTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC---H------HHHHHHHhc----C-----CCCCCCCHHHHHHHHHH
Confidence 988865 56899999999999765442111 1 111121111 1 11224567899999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++..... --.|..+.+.++
T Consensus 219 L~S~~s~-~itG~~i~vDGG 237 (242)
T d1ulsa_ 219 LLSDESS-FITGQVLFVDGG 237 (242)
T ss_dssp HHSGGGT-TCCSCEEEESTT
T ss_pred HhchhhC-CCCCcEEEECCC
Confidence 8863322 223788888887
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.74 E-value=2.4e-17 Score=153.19 Aligned_cols=234 Identities=15% Similarity=0.080 Sum_probs=154.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||++|||||++.||+++++.|+++| .+|.+..|+.+..+. ..+++.+ .....++.+
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l~~---~~~~~~~----------------~~~~~~~~~ 59 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEGLEA---SKAAVLE----------------TAPDAEVLT 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHH---HHHHHHH----------------HCTTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHH---HHHHHHh----------------hCCCCeEEE
Confidence 689999999999999999999999999 566888887654322 2211100 012357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC----c----cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK----F----DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~----~----~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+++|+++++......+...+.+.++|++||+||... + .+.++..+++|+.++..+.+++.+. ++..++|
T Consensus 60 ~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 139 (258)
T d1iy8a_ 60 TVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV 139 (258)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCc
Confidence 999999765433223333344567999999999642 1 2568889999999999999877553 3567899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 140 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 163 (258)
T d1iy8a_ 140 NTASVGGIRGI--------------------------------------------------------GNQSGYAAAKHGV 163 (258)
T ss_dssp EECCGGGTSBC--------------------------------------------------------SSBHHHHHHHHHH
T ss_pred ccccHhhccCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99997643211 1235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccC--cchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVED--LKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.. ..|+++..+.||.|..+.... +... .............. . ...-+...+|+|++
T Consensus 164 ~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~----~-----pl~R~~~p~dvA~~ 231 (258)
T d1iy8a_ 164 VGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN---SMKQLDPENPRKAAEEFIQV----N-----PSKRYGEAPEIAAV 231 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH---HHHHHCTTCHHHHHHHHHTT----C-----TTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHhCccCceEEEEeeCcccCHHHHH---HHhhcCcccHHHHHHHHHhc----C-----CCCCCcCHHHHHHH
Confidence 9988766 568999999999986532200 0000 00000111111110 0 11235678899999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++.... .--.|..+.+.++
T Consensus 232 v~fL~S~~s-~~itG~~i~VDGG 253 (258)
T d1iy8a_ 232 VAFLLSDDA-SYVNATVVPIDGG 253 (258)
T ss_dssp HHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHhCchh-cCCcCceEEcCcc
Confidence 998886332 2223788888887
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.74 E-value=4.7e-17 Score=150.87 Aligned_cols=225 Identities=13% Similarity=0.142 Sum_probs=152.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+||||||++.||.+++++|+++|. +|.++.|+.++......+... ....++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~---~vii~~r~~~~~~~~~~~~~~--------------------~~~~~~~~ 59 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNL---KNFVILDRVENPTALAELKAI--------------------NPKVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC---SEEEEEESSCCHHHHHHHHHH--------------------CTTSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEECCcccHHHHHHHHhh--------------------CCCCCEEE
Confidence 7899999999999999999999999994 457788887665444333221 12358889
Q ss_pred EeccCCCCC-CCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-c-----CCceEEEEec
Q 015874 90 VPGDISSED-LGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-V-----KLKVFVHVST 162 (399)
Q Consensus 90 ~~gDl~~~~-~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~-----~~~~~v~~SS 162 (399)
+..|+++.. ...+..+...+.+.++|++||+||... .+.++..+++|+.++.++.+++.+. . ...++|++||
T Consensus 60 ~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS 138 (254)
T d1sbya1 60 HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred EEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEec
Confidence 999998432 111112223233467999999999753 5678999999999999999887663 1 2356999988
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .....|+.+|.....+.
T Consensus 139 ~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~~t 162 (254)
T d1sbya1 139 VTGFNAI--------------------------------------------------------HQVPVYSASKAAVVSFT 162 (254)
T ss_dssp GGGTSCC--------------------------------------------------------TTSHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCCHHHHHHHHHHHHHH
Confidence 7654321 12357999999999888
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.. ..++++..+.||.|..+.......+..... .+.. . ...+.....+++|++++.+++
T Consensus 163 ~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~----~~~~--------~----~~~~~~~~~e~va~~~~~~~~ 226 (254)
T d1sbya1 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP----RVAE--------L----LLSHPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT----THHH--------H----HTTSCCEEHHHHHHHHHHHHH
T ss_pred HHHHhhccccCeEEEEEEeCCCcCccccccccchhHHH----HHHh--------c----cccCCCCCHHHHHHHHHHhhh
Confidence 766 568999999999998752211111111000 0000 0 012345678999999998887
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
.... |.++.+.++
T Consensus 227 ~~~t----G~vi~vdgG 239 (254)
T d1sbya1 227 ANKN----GAIWKLDLG 239 (254)
T ss_dssp HCCT----TCEEEEETT
T ss_pred CCCC----CCEEEECCC
Confidence 5432 678888776
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=8.6e-18 Score=155.55 Aligned_cols=229 Identities=14% Similarity=0.082 Sum_probs=152.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.++||++|||||++.||.++++.|+++| .+|.+..|+++. ++.+.+++ .++
T Consensus 2 ~rl~GK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---~~~~~~~~----------------------~~~ 53 (250)
T d1ydea1 2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDESG---GRALEQEL----------------------PGA 53 (250)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHC----------------------TTE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHhc----------------------CCC
Confidence 35789999999999999999999999999 556788776533 23333222 467
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++
T Consensus 54 ~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~I 133 (250)
T d1ydea1 54 VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNV 133 (250)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred eEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCC
Confidence 889999997554222222232344579999999996421 2558888999999999999887653 233689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||.+..... .....|+.+|..
T Consensus 134 i~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 157 (250)
T d1ydea1 134 INISSLVGAIGQ--------------------------------------------------------AQAVPYVATKGA 157 (250)
T ss_dssp EEECCHHHHHCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred cccccccccccc--------------------------------------------------------cCcchhHHHHhh
Confidence 999998654321 223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..+.||.|-.+.......... .....+....... ...-+...+|+|+++
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~~~---------pl~R~g~p~eva~~v 225 (250)
T d1ydea1 158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP---DPRASIREGMLAQ---------PLGRMGQPAEVGAAA 225 (250)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSS---SHHHHHHHHHHTS---------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCC---CHHHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence 99998766 568999999999986532100000000 0011111111110 112356789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.. . .--.|..+.+.++
T Consensus 226 ~fL~Sd-a-~~itG~~i~vDGG 245 (250)
T d1ydea1 226 VFLASE-A-NFCTGIELLVTGG 245 (250)
T ss_dssp HHHHHH-C-TTCCSCEEEESTT
T ss_pred HHHhCc-c-CCCcCCeEEECCC
Confidence 988863 2 2223788888877
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.73 E-value=1.6e-17 Score=154.44 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=141.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.|+||+||||||++.||.++++.|+++| .+|.+..|++++. ++..+++. + ...++.
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~G---a~V~~~~r~~~~l---~~~~~~~~---------~---------~~~~~~ 60 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYEL---NECLSKWQ---------K---------KGFQVT 60 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHH---------H---------TTCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH---------h---------cCCceE
Confidence 3789999999999999999999999999 5668888876443 22222110 0 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+...+.+ ..+|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++
T Consensus 61 ~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I 140 (259)
T d1xq1a_ 61 GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNI 140 (259)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred EEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccc
Confidence 99999997543221222222233 469999999997532 3678889999999999999887653 355789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.+|..
T Consensus 141 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 164 (259)
T d1xq1a_ 141 IFMSSIAGVVSA--------------------------------------------------------SVGSIYSATKGA 164 (259)
T ss_dssp EEEC------------------------------------------------------------------CCHHHHHHHH
T ss_pred cccccccccccc--------------------------------------------------------cccccccccccc
Confidence 999987643311 123579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..+-||.|-.+..... ... ........ . . ...-+...+|+|+++
T Consensus 165 l~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~---~~~-----~~~~~~~~-~---~-----pl~R~~~pedvA~~v 227 (259)
T d1xq1a_ 165 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDD-----EFKKVVIS-R---K-----PLGRFGEPEEVSSLV 227 (259)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHHHH
T ss_pred hhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh---chH-----HHHHHHHh-C---C-----CCCCCcCHHHHHHHH
Confidence 99988766 5689999999999876543110 000 00000000 0 0 111244567999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... .--.|..+.+.++
T Consensus 228 ~fL~S~~s-~~iTG~~i~vDGG 248 (259)
T d1xq1a_ 228 AFLCMPAA-SYITGQTICVDGG 248 (259)
T ss_dssp HHHTSGGG-TTCCSCEEECCCC
T ss_pred HHHhCchh-cCCcCcEEEeCCC
Confidence 98886322 2223678888776
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.73 E-value=1.7e-17 Score=155.02 Aligned_cols=233 Identities=16% Similarity=0.169 Sum_probs=154.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.|+||++|||||++.||.++++.|+++| .+|....|+.+. +++..+++ . ...++
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~---~~~~~~~l-------------~------~~~~~ 56 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADDH---GQKVCNNI-------------G------SPDVI 56 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHH-------------C------CTTTE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh-------------c------CCCce
Confidence 45899999999999999999999999999 556788786543 23333222 1 12467
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLK 155 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~ 155 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..
T Consensus 57 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g 136 (268)
T d2bgka1 57 SFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG 136 (268)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC
Confidence 889999997654222223232344679999999996421 2468888999999999999877653 2456
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||...+.... .....|+.+|
T Consensus 137 ~ii~iss~~~~~~~~-------------------------------------------------------~~~~~Y~asK 161 (268)
T d2bgka1 137 SIVFTASISSFTAGE-------------------------------------------------------GVSHVYTATK 161 (268)
T ss_dssp EEEEECCGGGTCCCT-------------------------------------------------------TSCHHHHHHH
T ss_pred Ccccccccccccccc-------------------------------------------------------ccccccchhH
Confidence 888888875432111 1124699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.|-++......+... ........... . ...-+...+|+|+
T Consensus 162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------~~~~~~~~~~~-~------~~gr~~~pedvA~ 228 (268)
T d2bgka1 162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS------SRVEELAHQAA-N------LKGTLLRAEDVAD 228 (268)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCH------HHHHHHHHHTC-S------SCSCCCCHHHHHH
T ss_pred HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCH------HHHHHHHHhcc-c------cCCCCcCHHHHHH
Confidence 9999998866 568999999999998765422111110 11111111000 0 0112566899999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... --.|.++.+.++
T Consensus 229 ~v~fL~S~~s~-~itGq~i~VDGG 251 (268)
T d2bgka1 229 AVAYLAGDESK-YVSGLNLVIDGG 251 (268)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHhChhhC-CccCceEEECcC
Confidence 99998864322 223788999887
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.4e-17 Score=155.24 Aligned_cols=234 Identities=11% Similarity=0.086 Sum_probs=153.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
.|+||++|||||++.||.++++.|+++| .+|.+..|+.++.+.. +++.+ ......+.++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~G---a~Vvi~~r~~~~l~~~~~el~~-----------------~~~~~~~~~~ 68 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLERLKSAADELQA-----------------NLPPTKQARV 68 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-----------------TSCTTCCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHh-----------------hhccccCceE
Confidence 4899999999999999999999999999 5668888876543221 22221 1122234688
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
.++.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. ++...+
T Consensus 69 ~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~I 148 (297)
T d1yxma1 69 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 148 (297)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred EEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccc
Confidence 999999997654222222232344679999999996532 3678889999999999999887653 234567
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|.+|+.+..+. +....|+.+|..
T Consensus 149 i~~ss~~~~~~---------------------------------------------------------~~~~~Y~asKaa 171 (297)
T d1yxma1 149 VNIIVPTKAGF---------------------------------------------------------PLAVHSGAARAG 171 (297)
T ss_dssp EEECCCCTTCC---------------------------------------------------------TTCHHHHHHHHH
T ss_pred ccccccccccc---------------------------------------------------------cccccchhHHHH
Confidence 77765432221 223579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..+.||.|..+......+... ...........+ ..-+...+|+|+++
T Consensus 172 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---------~~~~~~~~~~~p-----lgR~g~pedvA~~v 237 (297)
T d1yxma1 172 VYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG---------QSFFEGSFQKIP-----AKRIGVPEEVSSVV 237 (297)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG---------GGGGTTGGGGST-----TSSCBCTHHHHHHH
T ss_pred HHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC---------HHHHHHHHhcCC-----CCCCcCHHHHHHHH
Confidence 99998866 568999999999997754311100000 000000000111 12245678999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..... --.|..+.+.++
T Consensus 238 ~fL~Sd~s~-~iTG~~i~VDGG 258 (297)
T d1yxma1 238 CFLLSPAAS-FITGQSVDVDGG 258 (297)
T ss_dssp HHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHhCchhc-CcCCcEEEeCcC
Confidence 999864322 223788999887
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.8e-17 Score=150.55 Aligned_cols=218 Identities=19% Similarity=0.218 Sum_probs=150.6
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+++||+||||||++.||+++++.|+++| .+|.+..|++++ ++...+++ .++.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G---~~V~~~~r~~~~---l~~~~~~~----------------------~~~~ 55 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQAD---LDSLVREC----------------------PGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHS----------------------TTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHH---HHHHHHhc----------------------CCCe
Confidence 5899999999999999999999999999 556888886533 22222221 4678
Q ss_pred EEeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCC
Q 015874 89 FVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKL 154 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~---~~~ 154 (399)
.+.+|++++ +..++.+ .++|++||+|+.... .+.++..+++|+.++..+.+++.+ + ++.
T Consensus 56 ~~~~Dv~d~-------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 128 (244)
T d1pr9a_ 56 PVCVDLGDW-------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTTCH-------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCH-------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc
Confidence 899999954 4444444 468999999997542 367888999999999999887654 2 245
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+..... +....|+.+
T Consensus 129 g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 152 (244)
T d1pr9a_ 129 GAIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCST 152 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred ceEeecccccccccc--------------------------------------------------------cchhhhhhh
Confidence 689999988643321 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..++++..+.||.|..+.... .... ......... . . ...-+...+|+|
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~----~~~~~~~~~-~---~-----pl~R~~~peevA 216 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA---TWSD----PHKAKTMLN-R---I-----PLGKFAEVEHVV 216 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHT---TSCS----HHHHHHHHT-T---C-----TTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhh---hccC----hHHHHHHHh-c---C-----CCCCCcCHHHHH
Confidence 99999998866 568999999999987643211 0011 011111111 1 1 112356788999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++.... .--.|..+.+.++
T Consensus 217 ~~v~fL~S~~a-~~itG~~i~vDGG 240 (244)
T d1pr9a_ 217 NAILFLLSDRS-GMTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhCchh-CCcCCcEEEECcc
Confidence 99998886332 2223778888776
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.73 E-value=5.2e-17 Score=150.88 Aligned_cols=232 Identities=14% Similarity=0.085 Sum_probs=152.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+||+||||||++.||++++++|+++| .+|....|++... +...+++. ..+..+++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G---~~V~i~~r~~~~l---~~~~~~~~------------------~~~~~~~~ 59 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKEL---DECLEIWR------------------EKGLNVEG 59 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHH------------------HTTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH------------------hcCCCceE
Confidence 799999999999999999999999999 5668888875432 22222110 01357788
Q ss_pred EeccCCCCCCCCCchhhHHHHh-cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELW-NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~-~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
+.+|+++++......+...+.+ ..+|++||+|+.... .+.+...+++|+.+...+.+++.+. ++..++|
T Consensus 60 ~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii 139 (258)
T d1ae1a_ 60 SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 139 (258)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred EEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence 8999997543222222222333 358999999997642 3678899999999999999887653 3667899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 140 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 140 FLSSIAGFSAL--------------------------------------------------------PSVSLYSASKGAI 163 (258)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred ccccccccccc--------------------------------------------------------ccchhHHHHHHHH
Confidence 99988653321 2245799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..++++..+.||.|..+..... ................. . ...-+...+|+|.++.
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~----~-----plgR~~~pediA~~v~ 231 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA---IKKNPHQKEEIDNFIVK----T-----PMGRAGKPQEVSALIA 231 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHH----S-----TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh---hhhhhhhHHHHHHHHhc----C-----CCCCCcCHHHHHHHHH
Confidence 9998866 5689999999999987543111 11000011112221110 0 1123678899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++...... -.|..+.+.++
T Consensus 232 fL~S~~s~~-itG~~i~vDGG 251 (258)
T d1ae1a_ 232 FLCFPAASY-ITGQIIWADGG 251 (258)
T ss_dssp HHHSGGGTT-CCSCEEEESTT
T ss_pred HHhChhhCC-CcCcEEEeCCC
Confidence 988633321 12678888876
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.72 E-value=3.1e-17 Score=152.45 Aligned_cols=232 Identities=19% Similarity=0.139 Sum_probs=152.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||+++++.|+++| .+|.+..|++++. ++..+++. + .+.++.
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~~~---------~---------~g~~~~ 60 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKEL---NDCLTQWR---------S---------KGFKVE 60 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHH---------H---------TTCEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH---------h---------cCCCce
Confidence 3789999999999999999999999999 5568888865433 22222220 0 135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhc-CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWN-ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~-~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+.....+. ++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++
T Consensus 61 ~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~I 140 (259)
T d2ae2a_ 61 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNV 140 (259)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEE
T ss_pred EEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccc
Confidence 899999975532211222212233 58999999997532 2568889999999999999887653 345689
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||....... .....|+.+|..
T Consensus 141 i~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 164 (259)
T d2ae2a_ 141 VFISSVSGALAV--------------------------------------------------------PYEAVYGATKGA 164 (259)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred cccccccccccc--------------------------------------------------------ccccchHHHHHH
Confidence 999997543211 224579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..++++..+.||.|-.+.... .... ......+...... .+ ..-+...+|+|+++
T Consensus 165 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~---~~~~-~~~~~~~~~~~~~----~p-----l~R~g~pedvA~~v 231 (259)
T d2ae2a_ 165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD-PEQKENLNKLIDR----CA-----LRRMGEPKELAAMV 231 (259)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-HHHHHHHHHHHHT----ST-----TCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHh---hhhc-hhhHHHHHHHHhc----CC-----CCCCcCHHHHHHHH
Confidence 99998866 568999999999986533210 0000 0001111121111 11 11255678999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... .--.|..+.+.++
T Consensus 232 ~fL~S~~s-~~itG~~i~VDGG 252 (259)
T d2ae2a_ 232 AFLCFPAA-SYVTGQIIYVDGG 252 (259)
T ss_dssp HHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHhCchh-CCCcCcEEEECCC
Confidence 98886332 2223788888776
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=8.6e-17 Score=147.17 Aligned_cols=212 Identities=12% Similarity=0.104 Sum_probs=147.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+||+||||||++.||+++++.|+++| .+|.+..|+++. +++ ....+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~G---a~V~~~~r~~~~------l~~------------------------~~~~~ 48 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNEEL------LKR------------------------SGHRY 48 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH------HHH------------------------TCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH------HHh------------------------cCCcE
Confidence 689999999999999999999999999 566888886422 111 34567
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVH 159 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~ 159 (399)
+.+|+++ ..+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|+
T Consensus 49 ~~~Dv~~------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 49 VVCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp EECCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcchHH------HHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 8899986 445555667889999999996532 2568888999999999998877553 24568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 123 i~S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 146 (234)
T d1o5ia_ 123 ITSFSVISPI--------------------------------------------------------ENLYTSNSARMALT 146 (234)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------cccccchhHHHHHH
Confidence 9887543321 22357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
.+.+.. ..|+++..+.||.+-.+... ..... ........ . . ...-+...+|+|+++..
T Consensus 147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~---~~~~~-----~~~~~~~~-~---~-----pl~R~~~pediA~~v~f 209 (234)
T d1o5ia_ 147 GFLKTLSFEVAPYGITVNCVAPGWTETERVK---ELLSE-----EKKKQVES-Q---I-----PMRRMAKPEEIASVVAF 209 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHH---HHSCH-----HHHHHHHT-T---S-----TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEeecccCccchhhhh---hhcCH-----HHHHHHHh-c---C-----CCCCCcCHHHHHHHHHH
Confidence 888765 56899999999988664321 00000 01111111 1 1 12235678999999998
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++.... .--.|.++.+.++
T Consensus 210 L~S~~s-~~itG~~i~vDGG 228 (234)
T d1o5ia_ 210 LCSEKA-SYLTGQTIVVDGG 228 (234)
T ss_dssp HHSGGG-TTCCSCEEEESTT
T ss_pred HhChhh-cCCcCcEEEECcc
Confidence 886332 2223788888776
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.72 E-value=3.6e-17 Score=152.09 Aligned_cols=174 Identities=14% Similarity=0.118 Sum_probs=128.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+++||||++.||.++++.|+++| .+|.+..|+++.. +...+++. ..+.++.
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~~~------------------~~g~~~~ 57 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREAL---EKAEASVR------------------EKGVEAR 57 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHH------------------TTTSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH------------------hcCCcEE
Confidence 3789999999999999999999999999 5568888865432 22222221 0135788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++
T Consensus 58 ~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~I 137 (260)
T d1zema1 58 SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI 137 (260)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCC
Confidence 99999997554222233333344679999999996521 2568888999999999999887552 356789
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
|++||...+... .....|+.+|..
T Consensus 138 I~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 161 (260)
T d1zema1 138 VNTASMAGVKGP--------------------------------------------------------PNMAAYGTSKGA 161 (260)
T ss_dssp EEECCHHHHSCC--------------------------------------------------------TTBHHHHHHHHH
T ss_pred CeeechhhccCC--------------------------------------------------------cchHHHHHHHHH
Confidence 999998644321 113579999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
.+.+.+.. ..|+++..+.||.|-.+
T Consensus 162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 162 IIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 99998866 56899999999998764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.72 E-value=2.8e-17 Score=152.28 Aligned_cols=229 Identities=15% Similarity=0.090 Sum_probs=152.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.++||+++||||++.||.++++.|+++| .+|.+..|+++. ++.+.+++ +.+.
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~~~~~~---~~~~~~~~---------------------~~~~ 54 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINEAA---GQQLAAEL---------------------GERS 54 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCHHH---HHHHHHHH---------------------CTTE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHh---------------------CCCe
Confidence 45899999999999999999999999999 556777775432 23333222 3578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v 158 (399)
.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|
T Consensus 55 ~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv 134 (253)
T d1hxha_ 55 MFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSII 134 (253)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCcee
Confidence 889999997554222223333344679999999997532 2568889999999999998887663 2347899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....... .....|+.+|...
T Consensus 135 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal 158 (253)
T d1hxha_ 135 NMASVSSWLPI--------------------------------------------------------EQYAGYSASKAAV 158 (253)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHH
T ss_pred cccchhhhcCc--------------------------------------------------------cccccccchhHHH
Confidence 99998643211 2235799999999
Q ss_pred HHHHHHh-----h--CCCcEEEEecCceecCCCCC-CCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 239 EMLMQQS-----K--ENLSLVIIRPTVVSGTYKEP-FPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 239 E~~l~~~-----~--~~~~~~i~Rp~~V~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
+.+.+.. . .++++..+.||.|-.+.... .+ ... ......... .....-.+...+|+|+
T Consensus 159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~---~~~------~~~~~~~~~-----~~~~~gr~~~pedvA~ 224 (253)
T d1hxha_ 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KGV------SKEMVLHDP-----KLNRAGRAYMPERIAQ 224 (253)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TTC------CHHHHBCBT-----TTBTTCCEECHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCc---chh------hHHHHHhCc-----cccccCCCCCHHHHHH
Confidence 9888755 2 35999999999986532100 00 000 000011000 0011224677899999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++.++..... --.|..+++.++
T Consensus 225 ~v~fL~S~~s~-~itG~~i~VDGG 247 (253)
T d1hxha_ 225 LVLFLASDESS-VMSGSELHADNS 247 (253)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHhChhhC-CCcCcEEEECcc
Confidence 99998863322 223788888776
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.71 E-value=3.2e-17 Score=151.97 Aligned_cols=231 Identities=14% Similarity=0.075 Sum_probs=148.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|.+|||||++.||.++++.|+++| .+|.+..|++++. +...+++.+ .+.++.++++
T Consensus 2 KValITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~i~~------------------~g~~~~~~~~ 57 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDATA---KAVASEINQ------------------AGGHAVAVKV 57 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH------------------TTCCEEEEEC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHh------------------cCCcEEEEEe
Confidence 567999999999999999999999 5568888876433 222222200 1357889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHh-c---cCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKK-C---VKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~-~---~~~~~~v~~S 161 (399)
|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+ + ++..+++++|
T Consensus 58 Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~is 137 (255)
T d1gega_ 58 DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINAC 137 (255)
T ss_dssp CTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred eCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcccccccccc
Confidence 9997654332233333345679999999997532 266888999999999999987654 2 2346788899
Q ss_pred cceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHH
Q 015874 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEML 241 (399)
Q Consensus 162 S~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~ 241 (399)
|.+..... .....|+.+|...+.+
T Consensus 138 S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~l 161 (255)
T d1gega_ 138 SQAGHVGN--------------------------------------------------------PELAVYSSSKFAVRGL 161 (255)
T ss_dssp CGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHHHH
T ss_pred chhhcccC--------------------------------------------------------cccccchhCHHHHHhh
Confidence 87643221 2235799999999999
Q ss_pred HHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccc---cCCCccccCeeeHHHHHHHHH
Q 015874 242 MQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCL---VGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 242 l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~i~ 313 (399)
.+.. ..|+++..+.||.|-.+... ....-............ ........-+...+|+|+++.
T Consensus 162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~ 231 (255)
T d1gega_ 162 TQTAARDLAPLGITVNGYCPGIVKTPMWA----------EIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 231 (255)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSSHHHH----------HHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHhhhhCcEEEEEecCcccChHHh----------hhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 8866 56899999999988553210 00000000000000000 000011223567899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... .--.|..+.+.++
T Consensus 232 fL~S~~a-~~itG~~i~vDGG 251 (255)
T d1gega_ 232 YLASPDS-DYMTGQSLLIDGG 251 (255)
T ss_dssp HHHSGGG-TTCCSCEEEESSS
T ss_pred HHhCchh-CCccCcEEEecCC
Confidence 8886332 2223788888887
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.71 E-value=5e-17 Score=150.82 Aligned_cols=233 Identities=13% Similarity=0.056 Sum_probs=152.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
||.+|||||++.||.++++.|+++| .+|.+..|+++.. +...+++.+ .+.++.+++
T Consensus 2 gKValITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l---~~~~~~l~~------------------~g~~~~~~~ 57 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEGL---RTTLKELRE------------------AGVEADGRT 57 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH------------------TTCCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHh------------------cCCcEEEEE
Confidence 7899999999999999999999999 5568888875432 332222210 135788999
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-----cCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-----VKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-----~~~~~~v~ 159 (399)
+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|+
T Consensus 58 ~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~ 137 (257)
T d2rhca1 58 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVN 137 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccc
Confidence 99997654332333333345679999999997532 3578899999999999999988652 23457888
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||....... .....|+.+|...+
T Consensus 138 i~S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 161 (257)
T d2rhca1 138 IASTGGKQGV--------------------------------------------------------VHAAPYSASKHGVV 161 (257)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------ccchhHHHHHHHHH
Confidence 8887543321 12357999999999
Q ss_pred HHHHHh-----hCCCcEEEEecCceecCCCCCCC-Cccc-CcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS-----KENLSLVIIRPTVVSGTYKEPFP-GWVE-DLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.. ..|+++..+.||.|-.+...... .+.. .-.........+... . ...-+...+|+|+++
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~----~-----PlgR~~~pedia~~v 232 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR----V-----PIGRYVQPSEVAEMV 232 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT----S-----TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc----C-----CCCCCcCHHHHHHHH
Confidence 998866 56899999999988653210000 0000 000000111111110 0 112356788999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++.... .--.|..+.+.++
T Consensus 233 ~fL~S~~s-~~itG~~i~vDGG 253 (257)
T d2rhca1 233 AYLIGPGA-AAVTAQALNVCGG 253 (257)
T ss_dssp HHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHhCchh-cCCcCceEEECcC
Confidence 99886332 2223788888876
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.71 E-value=5.7e-17 Score=151.00 Aligned_cols=239 Identities=15% Similarity=0.121 Sum_probs=147.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||++|||||++.||++++++|+++| .+|.+..|+.+.. +...+++.+ . .....++.+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~l~~---------~------~~~~~~~~~ 61 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAERL---EETRQQILA---------A------GVSEQNVNS 61 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH---------T------TCCGGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHh---------c------CCCcCceEE
Confidence 789999999999999999999999999 5568888876443 222222211 0 012357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----------ccccHHHHHHHhHHHHHHHHHHHHhc--cCCce
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----------FDERYDVAFGINTLGVIHLVNFAKKC--VKLKV 156 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----------~~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~ 156 (399)
+.+|+++++......+.....+.++|++||+||... ..+.++..+++|+.+...+.+++.+. ++...
T Consensus 62 ~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~ 141 (264)
T d1spxa_ 62 VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGE 141 (264)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCc
Confidence 999999755422222222233457999999998642 12468888999999999999887663 23345
Q ss_pred EEEEeccee-ecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 157 FVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 157 ~v~~SS~~v-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
+|.++|+.. .... .....|+.+|
T Consensus 142 iI~~~S~~~~~~~~--------------------------------------------------------~~~~~Y~asK 165 (264)
T d1spxa_ 142 IVNISSIASGLHAT--------------------------------------------------------PDFPYYSIAK 165 (264)
T ss_dssp EEEECCTTSSSSCC--------------------------------------------------------TTSHHHHHHH
T ss_pred ceeeeeeccccccC--------------------------------------------------------CCchhhhhhh
Confidence 666555432 2111 1134699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.|-.+........................ ..| ..-+...+|+|+
T Consensus 166 aal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~P-----l~R~g~pedvA~ 236 (264)
T d1spxa_ 166 AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE----CVP-----AGVMGQPQDIAE 236 (264)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----HCT-----TSSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHh----cCC-----CCCCcCHHHHHH
Confidence 9999998866 56899999999999765432110000000000111111111 011 112456789999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..+...--.|..+.+.++
T Consensus 237 ~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 237 VIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp HHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHhCCcccCCccCceEEeCCC
Confidence 999888533222112788888876
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.71 E-value=9.1e-17 Score=147.83 Aligned_cols=217 Identities=18% Similarity=0.174 Sum_probs=148.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||++|||||++.||+++++.|+++| .+|.+..|++++. +.+.+++ .++.+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~~----------------------~~~~~ 54 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTNSDL---VSLAKEC----------------------PGIEP 54 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHS----------------------TTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHhc----------------------CCCeE
Confidence 689999999999999999999999999 5568888875432 2222221 46788
Q ss_pred EeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~ 155 (399)
+.+|++++ +..++.+ .++|++||+||.... .+.++..+++|+.++..+.+++.+. +...
T Consensus 55 ~~~Dv~~~-------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g 127 (242)
T d1cyda_ 55 VCVDLGDW-------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127 (242)
T ss_dssp EECCTTCH-------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCCH-------HHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC
Confidence 99999954 3444444 468999999997542 3568889999999999998876542 2346
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||....... +....|+.+|
T Consensus 128 ~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 151 (242)
T d1cyda_ 128 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 151 (242)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred cccccchhhccccC--------------------------------------------------------CccccccchH
Confidence 89999988543321 1235799999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.|-.+.... +... .......... . ...-+...+|+|+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~----~~~~~~~~~~----~-----pl~R~~~peeva~ 215 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK---VSAD----PEFARKLKER----H-----PLRKFAEVEDVVN 215 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH---HTCC----HHHHHHHHHH----S-----TTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh---hcCC----HHHHHHHHhc----C-----CCCCCcCHHHHHH
Confidence 9999998866 568999999999886542210 0000 0111111110 1 1123567889999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..... --.|.++.+.++
T Consensus 216 ~v~fL~S~~s~-~itG~~i~vDGG 238 (242)
T d1cyda_ 216 SILFLLSDRSA-STSGGGILVDAG 238 (242)
T ss_dssp HHHHHHSGGGT-TCCSSEEEESTT
T ss_pred HHHHHhCchhc-CcCCceEEeCcc
Confidence 99998863322 223788888776
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.6e-17 Score=151.76 Aligned_cols=204 Identities=13% Similarity=0.117 Sum_probs=144.1
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
++.+.||+|+||||++.||.+++++|+++| .+|.+..|+.++. +.+.+++. ..+.+
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G---~~V~l~~r~~~~l---~~~~~~~~------------------~~~~~ 57 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHGL---EETAAKCK------------------GLGAK 57 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHH------------------HTTCC
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHH------------------hcCCc
Confidence 356899999999999999999999999999 6678888876543 22222220 02468
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+.++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+..++++++.+. ++..+
T Consensus 58 ~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~ 137 (244)
T d1yb1a_ 58 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGH 137 (244)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCce
Confidence 8999999997654333333333345679999999998643 2557788999999999999877653 35568
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||........ ....|+.||+
T Consensus 138 Iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~asKa 161 (244)
T d1yb1a_ 138 IVTVASAAGHVSVP--------------------------------------------------------FLLAYCSSKF 161 (244)
T ss_dssp EEEECCCC-CCCHH--------------------------------------------------------HHHHHHHHHH
T ss_pred EEEeecchhcCCCC--------------------------------------------------------CcHHHHHHHH
Confidence 99999987543211 1246999999
Q ss_pred HHHHHHHHh-----h---CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 237 MGEMLMQQS-----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 237 ~~E~~l~~~-----~---~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+.+.+.+.. . .|++++.+.||.|-.+.. .. ... .....+..+++
T Consensus 162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~-------~~--------------~~~-------~~~~~~~pe~v 213 (244)
T d1yb1a_ 162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI-------KN--------------PST-------SLGPTLEPEEV 213 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST-------TC--------------THH-------HHCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh-------hC--------------cCc-------cccCCCCHHHH
Confidence 999888765 1 479999999998855432 11 000 11123457899
Q ss_pred HHHHHHHHHh
Q 015874 309 VNAMIVAMVA 318 (399)
Q Consensus 309 a~~i~~~~~~ 318 (399)
|+.++..+..
T Consensus 214 a~~i~~~~~~ 223 (244)
T d1yb1a_ 214 VNRLMHGILT 223 (244)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999988864
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.70 E-value=4.8e-17 Score=152.38 Aligned_cols=239 Identities=13% Similarity=0.123 Sum_probs=151.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+++||||++.||.++++.|+++| .+|.+..|+.++. +...+++.+ . .....++.+
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~l---~~~~~~i~~---------~------~~~~~~~~~ 60 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRL---EETKQQILK---------A------GVPAEKINA 60 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH---------T------TCCGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHH---------c------CCCCcceEE
Confidence 689999999999999999999999999 5668888875433 332222211 0 011357899
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc---------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF---------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVF 157 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~ 157 (399)
+.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.+...+.+++.+. ++...+
T Consensus 61 ~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~i 140 (274)
T d1xhla_ 61 VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIV 140 (274)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccc
Confidence 9999997553222223333344579999999986421 1457888999999999999887653 244567
Q ss_pred EEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHH
Q 015874 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTM 237 (399)
Q Consensus 158 v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (399)
+++||.+..... .....|+.+|..
T Consensus 141 i~~ss~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 164 (274)
T d1xhla_ 141 NVSSIVAGPQAH--------------------------------------------------------SGYPYYACAKAA 164 (274)
T ss_dssp EECCGGGSSSCC--------------------------------------------------------TTSHHHHHHHHH
T ss_pred cchhhhhccccC--------------------------------------------------------CCCceehhhhhH
Confidence 777765432211 113479999999
Q ss_pred HHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 238 GEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 238 ~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.+.. ..|+++..+.||.|-.+...... .. .....-...........+| ..-+...+|+|+++
T Consensus 165 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~~~~~iP-----lgR~g~pediA~~v 235 (274)
T d1xhla_ 165 LDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG---LP-ETASDKLYSFIGSRKECIP-----VGHCGKPEEIANII 235 (274)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT---CC-HHHHHHHHHHHHHCTTTCT-----TSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc---cc-chhhHHHHHHHHHHHcCCC-----CCCCcCHHHHHHHH
Confidence 99998765 56899999999999764321100 00 0000011111110101111 12245789999999
Q ss_pred HHHHHhccCCCCCCcEEEecCC
Q 015874 313 IVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+.++..+...--.|..+.+.++
T Consensus 236 ~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 236 VFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHcCCccccCccCcEEEeCcC
Confidence 9888532222122788999887
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.70 E-value=1.4e-16 Score=147.97 Aligned_cols=237 Identities=14% Similarity=0.142 Sum_probs=154.1
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA-LRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
|.-.++||+||||||++.||.++++.|+++| .+|.+..|+.++.... +++.++ .+
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~~~~~~~~~~~---------------------~g 58 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAADAVEVTEKVGKE---------------------FG 58 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTTHHHHHHHHHHH---------------------HT
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHH---------------------hC
Confidence 4446899999999999999999999999999 6678888987654222 222211 13
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cC
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VK 153 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~ 153 (399)
.++.++.+|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. ..
T Consensus 59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~ 138 (260)
T d1h5qa_ 59 VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ 138 (260)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc
Confidence 678899999997654222233333344579999999987532 2568889999999999998876542 23
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
...++..||..........+ ........|+.
T Consensus 139 ~g~i~~~~s~~~~~~~~~~~-------------------------------------------------~~~~~~~~Y~a 169 (260)
T d1h5qa_ 139 KGSIVVTSSMSSQIINQSSL-------------------------------------------------NGSLTQVFYNS 169 (260)
T ss_dssp CEEEEEECCGGGTSCCEEET-------------------------------------------------TEECSCHHHHH
T ss_pred ceEEEEeecccccccccccc-------------------------------------------------ccCccccchhh
Confidence 44566666654433211000 00022357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|...+.+.+.. ..|+++..+.||.|-.+.... .. .......... ++ ..-+...+|+
T Consensus 170 sKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~----~~-----~~~~~~~~~~----~p-----l~R~g~pedv 231 (260)
T d1h5qa_ 170 SKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----MD-----KKIRDHQASN----IP-----LNRFAQPEEM 231 (260)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SC-----HHHHHHHHHT----CT-----TSSCBCGGGG
T ss_pred hhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc----cC-----HHHHHHHHhc----CC-----CCCCcCHHHH
Confidence 999999988765 578999999999986543211 00 1112222111 11 1124557799
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+++..++..... --.|..+.+.++
T Consensus 232 A~~v~fL~S~~s~-~itG~~i~VDGG 256 (260)
T d1h5qa_ 232 TGQAILLLSDHAT-YMTGGEYFIDGG 256 (260)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHHHHhcchhC-CCcCceEEECCC
Confidence 9999988863322 223788888887
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=1.3e-16 Score=147.70 Aligned_cols=228 Identities=15% Similarity=0.111 Sum_probs=146.7
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.|+||++|||||+| .||.+++++|+++| .+|.+..|++......++.... ..+
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~G---a~V~i~~~~~~~~~~~~~~~~~----------------------~~~ 59 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERLRPEAEKLAEA----------------------LGG 59 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHH----------------------TTC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCcHHHHHHHHHhhhc----------------------cCc
Confidence 47999999999998 79999999999999 4556666664333222222211 246
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccC-------c----cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITK-------F----DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-------~----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
..++++|+++++......+...+.+.++|++||+|+... + .+.+...+++|+.+...+.+.+... ++-
T Consensus 60 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T d1ulua_ 60 ALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (256)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred ccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC
Confidence 778999999755322222222234467999999998642 1 2356778999999999999887764 234
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||....... +....|+.+
T Consensus 140 G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 163 (256)
T d1ulua_ 140 GGIVTLTYYASEKVV--------------------------------------------------------PKYNVMAIA 163 (256)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred CEEEEEeehHhcCCC--------------------------------------------------------CCchHHHHH
Confidence 678999987643321 224579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. .+|+++..+.||.|..+....... . .......... .+ ..-+...+|+|
T Consensus 164 Kaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~---~----~~~~~~~~~~----~p-----l~R~~~pedvA 227 (256)
T d1ulua_ 164 KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG---F----TKMYDRVAQT----AP-----LRRNITQEEVG 227 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------C----HHHHHHHHHH----ST-----TSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh---h----HHHHHHHHhc----CC-----CCCCcCHHHHH
Confidence 99999998866 568999999999987755421111 0 1112222111 11 11245678999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++..... --.|..+.+.++
T Consensus 228 ~~v~fL~S~~s~-~itG~~i~VDGG 251 (256)
T d1ulua_ 228 NLGLFLLSPLAS-GITGEVVYVDAG 251 (256)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCchhC-CccCCeEEECcC
Confidence 999998864322 223788888876
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.70 E-value=7.3e-17 Score=150.95 Aligned_cols=240 Identities=13% Similarity=0.130 Sum_probs=149.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||+++++.|+++| .+|.+..|+.++. +...+++.+ ......++.
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~G---a~V~l~~r~~~~l---~~~~~~l~~---------------~~~~~~~~~ 60 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSERL---EETRQIILK---------------SGVSEKQVN 60 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHT---------------TTCCGGGEE
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHh---------------cCCCCCceE
Confidence 3789999999999999999999999999 5668888876443 333322211 011235789
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------c----ccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------D----ERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~----~~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
++++|+++++......+...+.+.++|++||+||.... . +.++..+++|+.++..+.+++.+. ++..
T Consensus 61 ~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g 140 (272)
T d1xkqa_ 61 SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG 140 (272)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred EEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC
Confidence 99999997554222222332344579999999997531 1 247888999999999999887663 2233
Q ss_pred eEEEEec-ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 156 VFVHVST-AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 156 ~~v~~SS-~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+|.++| .+..... .....|+.+
T Consensus 141 ~iI~~~Ss~a~~~~~--------------------------------------------------------~~~~~Y~as 164 (272)
T d1xkqa_ 141 EIVNVSSIVAGPQAQ--------------------------------------------------------PDFLYYAIA 164 (272)
T ss_dssp EEEEECCGGGSSSCC--------------------------------------------------------CSSHHHHHH
T ss_pred ccccccchhccccCC--------------------------------------------------------CCcchhhhH
Confidence 4555544 3322111 123579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+.+.. ..|+++..+.||.|-.+...... .. .....-...........++ ..-+...+|+|
T Consensus 165 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~~~~~~P-----lgR~g~pediA 235 (272)
T d1xkqa_ 165 KAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG---MP-DQASQKFYNFMASHKECIP-----IGAAGKPEHIA 235 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT---CC-HHHHHHHHHHHHHCTTTCT-----TSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccC---Cc-hHHHHHHHHHHHHHhcCCC-----CCCCcCHHHHH
Confidence 99999988766 57899999999998664321100 00 0000001111110101111 12356678999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++......--.|.++.+.++
T Consensus 236 ~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 236 NIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp HHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHhCcchhCCccCeEEEeCcC
Confidence 9999888533221112788988887
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.70 E-value=4.5e-17 Score=150.10 Aligned_cols=225 Identities=13% Similarity=0.127 Sum_probs=147.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
..||||||++.||.++++.|+++|+ +|.+..++... .++.+.+++. ..+.++.++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga---~V~i~~~~~~~--~~~~~~~~~~------------------~~g~~~~~~~~ 58 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSAK--AAEEVSKQIE------------------AYGGQAITFGG 58 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHH------------------HHTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHHHH------------------HcCCcEEEEeC
Confidence 3699999999999999999999994 45655444321 1222222210 01357889999
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. ++..++|++||
T Consensus 59 Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS 138 (244)
T d1edoa_ 59 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS 138 (244)
T ss_dssp CTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 9997553222222233334679999999997642 3678889999999999998887653 35679999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
...+... .....|+.+|...+.+.
T Consensus 139 ~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~lt 162 (244)
T d1edoa_ 139 VVGLIGN--------------------------------------------------------IGQANYAAAKAGVIGFS 162 (244)
T ss_dssp THHHHCC--------------------------------------------------------TTCHHHHHHHHHHHHHH
T ss_pred hhhcCCC--------------------------------------------------------CCCHHHHHHHHHHHHCh
Confidence 8644321 12357999999999998
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.. ..|+++..+.||.|-.+.... +. ......... . . ...-+...+|+|+++..++.
T Consensus 163 k~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~------~~~~~~~~~-~---~-----pl~R~~~p~dvA~~v~fLa~ 224 (244)
T d1edoa_ 163 KTAAREGASRNINVNVVCPGFIASDMTAK---LG------EDMEKKILG-T---I-----PLGRTGQPENVAGLVEFLAL 224 (244)
T ss_dssp HHHHHHHHTTTEEEEEEEECSBCSHHHHT---TC------HHHHHHHHT-S---C-----TTCSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhCcEEEEEecceeccHHHHH---hh------HHHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHHHC
Confidence 866 568999999999886532211 00 011111111 1 1 11235667999999998753
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
.+...--.|..+.+.++
T Consensus 225 S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 225 SPAASYITGQAFTIDGG 241 (244)
T ss_dssp CSGGGGCCSCEEEESTT
T ss_pred CchhcCCcCCeEEeCCC
Confidence 22222122678888776
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.69 E-value=1e-16 Score=150.26 Aligned_cols=234 Identities=12% Similarity=0.153 Sum_probs=146.5
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++||+||||||++.||+++++.|+++| .+|.+..|+.++. +.+.+++ +.++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~l---~~~~~~~---------------------~~~~~~ 55 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEG---AKVAVLDKSAERL---AELETDH---------------------GDNVLG 55 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------------------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHc---------------------CCCeeE
Confidence 789999999999999999999999999 5568888865332 2222211 357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc--------c----ccHHHHHHHhHHHHHHHHHHHHhc--cCCc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF--------D----ERYDVAFGINTLGVIHLVNFAKKC--VKLK 155 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~--------~----~~~~~~~~~n~~~~~~ll~~a~~~--~~~~ 155 (399)
+.+|+++++......+...+.+.++|++||+||.... . +.++..+++|+.++..+.+++.+. ++..
T Consensus 56 ~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g 135 (276)
T d1bdba_ 56 IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRG 135 (276)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred EecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 9999997543222222222344579999999996421 1 237888999999999998887653 2235
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
++|++||....... .....|+.+|
T Consensus 136 ~iI~i~S~~~~~~~--------------------------------------------------------~~~~~Y~asK 159 (276)
T d1bdba_ 136 NVIFTISNAGFYPN--------------------------------------------------------GGGPLYTAAK 159 (276)
T ss_dssp EEEEECCGGGTSTT--------------------------------------------------------SSCHHHHHHH
T ss_pred CceeeeechhccCC--------------------------------------------------------CCCchHHHHH
Confidence 78887776432211 1235799999
Q ss_pred HHHHHHHHHh----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 236 TMGEMLMQQS----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 236 ~~~E~~l~~~----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
...+.+.+.. ..++++..+.||.|-.+...+.............-+....... . ...-+...+|+|.+
T Consensus 160 aal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----PlgR~g~peeva~~ 231 (276)
T d1bdba_ 160 HAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV---L-----PIGRMPEVEEYTGA 231 (276)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT---C-----TTSSCCCGGGGSHH
T ss_pred HHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc---C-----CCCCCcCHHHHHHH
Confidence 9999998866 3459999999999976543221110000000000011111111 1 11124456799999
Q ss_pred HHHHHHhccCCCCCCcEEEecCC
Q 015874 312 MIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 312 i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++.++......--.|..+++.++
T Consensus 232 v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 232 YVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp HHHHHCHHHHTTCSSCEEEESSS
T ss_pred HHHHcCCcccCCeeCcEEEECcC
Confidence 88777422111112788999887
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.69 E-value=1.1e-15 Score=142.69 Aligned_cols=244 Identities=13% Similarity=0.076 Sum_probs=156.1
Q ss_pred cccHHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 015874 3 LGSVVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSF 82 (399)
Q Consensus 3 ~~~~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (399)
++.-...|+||+||||||++.||+++++.|+++| .+|.+..|+..+ .++...+++. .
T Consensus 9 ~~~~~~sL~gK~~lITGas~GIG~aia~~la~~G---a~Vvi~~~~~~~--~~~~~~~~~~------------------~ 65 (272)
T d1g0oa_ 9 LGPQSASLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTE--SAEEVVAAIK------------------K 65 (272)
T ss_dssp SSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------------H
T ss_pred CCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchH--HHHHHHHHHH------------------h
Confidence 4455677999999999999999999999999999 555777666432 1222222210 0
Q ss_pred ccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCC
Q 015874 83 ISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKL 154 (399)
Q Consensus 83 ~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~ 154 (399)
.+.++.++++|+++++......+...+.+.++|++||+|+.... .+.++..+++|+.++..+.+++.+. .+-
T Consensus 66 ~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~ 145 (272)
T d1g0oa_ 66 NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG 145 (272)
T ss_dssp TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT
T ss_pred hCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc
Confidence 13578899999997654333333333445679999999997642 2567888999999999999988763 344
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.+++.++|...... +......|+.+
T Consensus 146 g~~i~i~s~~~~~~-------------------------------------------------------~~~~~~~Y~as 170 (272)
T d1g0oa_ 146 GRLILMGSITGQAK-------------------------------------------------------AVPKHAVYSGS 170 (272)
T ss_dssp CEEEEECCGGGTCS-------------------------------------------------------SCSSCHHHHHH
T ss_pred cccccccccccccc-------------------------------------------------------cccchhhHHHH
Confidence 67777776532111 01224579999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCC----CCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPF----PGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+..+.+.+.. ..|+++..+.||.|-.+..... ...... ............. .. ...-+...
T Consensus 171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~-----PlgR~~~p 241 (272)
T d1g0oa_ 171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGEN-LSNEEVDEYAAVQ---WS-----PLRRVGLP 241 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTT-CCHHHHHHHHHHH---SC-----TTCSCBCH
T ss_pred HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccc-cchHHHHHHHHHc---cC-----CCCCCcCH
Confidence 99999998765 5689999999999865321000 000000 0000000000000 00 11235778
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|+++..++..... --.|....+.++
T Consensus 242 eevA~~v~fL~s~~s~-~itG~~i~vDGG 269 (272)
T d1g0oa_ 242 IDIARVVCFLASNDGG-WVTGKVIGIDGG 269 (272)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CccCceEeECCC
Confidence 9999999999863332 223778888776
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.4e-16 Score=147.51 Aligned_cols=229 Identities=15% Similarity=0.203 Sum_probs=147.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+||++|||||++.||.++++.|+++| .+|.+..|+.++. ++..+++ . ....+.++.++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~~~~---~~~~~~l---------~-------~~~~~~~~~~~ 59 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLEAG---VQCKAAL---------H-------EQFEPQKTLFI 59 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHH---------T-------TTSCGGGEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHH---------H-------HhcCCCcEEEE
Confidence 68999999999999999999999999 5668888876543 2222221 0 11124578899
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc-c-----CCceEEEEecce
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC-V-----KLKVFVHVSTAY 164 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~-~-----~~~~~v~~SS~~ 164 (399)
.+|+++++......+...+.+.++|++||+|+... ..+++..+++|+.++..+.+++.+. . ...++|++||.+
T Consensus 60 ~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 60 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred EeecCCHHHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 99999755322222222233457999999999854 4568889999999998888877653 1 124699999986
Q ss_pred eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHH
Q 015874 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQ 244 (399)
Q Consensus 165 v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~ 244 (399)
..... .....|+.+|...+.+.+.
T Consensus 139 ~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ltrs 162 (254)
T d2gdza1 139 GLMPV--------------------------------------------------------AQQPVYCASKHGIVGFTRS 162 (254)
T ss_dssp GTSCC--------------------------------------------------------TTCHHHHHHHHHHHHHHHH
T ss_pred hccCC--------------------------------------------------------CCccchHHHHHHHHHHHHH
Confidence 43211 2235799999999988753
Q ss_pred ------h-hCCCcEEEEecCceecCCCCCCCC---cccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHH
Q 015874 245 ------S-KENLSLVIIRPTVVSGTYKEPFPG---WVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIV 314 (399)
Q Consensus 245 ------~-~~~~~~~i~Rp~~V~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~ 314 (399)
+ ..|+++..+.||.|-.+..+.... ..........+... + ...-+...+|+|++++.
T Consensus 163 ~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--------~-----p~~r~~~pedvA~~v~f 229 (254)
T d2gdza1 163 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM--------I-----KYYGILDPPLIANGLIT 229 (254)
T ss_dssp HHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH--------H-----HHHCCBCHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc--------C-----CCCCCcCHHHHHHHHHH
Confidence 2 568999999999886532110000 00000000000000 0 01123456899999999
Q ss_pred HHHhccCCCCCCcEEEecCC
Q 015874 315 AMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 315 ~~~~~~~~~~~~~~yni~~~ 334 (399)
++... .- .|.+..+.++
T Consensus 230 L~s~~-~i--tG~~i~VdGG 246 (254)
T d2gdza1 230 LIEDD-AL--NGAIMKITTS 246 (254)
T ss_dssp HHHCT-TC--SSCEEEEETT
T ss_pred HHcCC-CC--CCCEEEECCC
Confidence 98732 22 3788888887
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.67 E-value=1.5e-16 Score=147.58 Aligned_cols=236 Identities=13% Similarity=0.068 Sum_probs=149.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..|.||+||||||++.||.++++.|+++|+ +|.+..|+..+ ..++..+++. ..+.++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~---~Vvi~~~~~~~--~~~~~~~~~~------------------~~g~~~ 58 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSSK--AAEEVVAELK------------------KLGAQG 58 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHH------------------HTTCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEcCCChH--HHHHHHHHHH------------------HcCCCc
Confidence 357899999999999999999999999994 55666665432 1222222220 124578
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
.++.+|+++++......+.....+.++|++||+||.... .+.++..+++|+.+...+++++.+. ++-.+++.
T Consensus 59 ~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~ii 138 (259)
T d1ja9a_ 59 VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIIL 138 (259)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccc
Confidence 899999997554222222222344579999999997632 2567888999999999999988763 33345666
Q ss_pred Eecce-eecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 160 VSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 160 ~SS~~-v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++|.. .... ......|+.+|...
T Consensus 139 i~s~~~~~~~--------------------------------------------------------~~~~~~Y~asK~al 162 (259)
T d1ja9a_ 139 TSSIAAVMTG--------------------------------------------------------IPNHALYAGSKAAV 162 (259)
T ss_dssp ECCGGGTCCS--------------------------------------------------------CCSCHHHHHHHHHH
T ss_pred cccccccccC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 65542 2211 02235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCC------CCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYK------EPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
+.+++.. ..|+++..+.||.|-.+.. ........ .....+....... ....-+...+|
T Consensus 163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~pl~R~g~p~e 231 (259)
T d1ja9a_ 163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG--MPQEKIDEGLANM---------NPLKRIGYPAD 231 (259)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTT--CCHHHHHHHHHHT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhccc--CCHHHHHHHHHhC---------CCCCCCcCHHH
Confidence 9888766 5689999999999865321 00000000 0001111111111 11223667889
Q ss_pred HHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 308 va~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|++++.++..... --.|.++.+.++
T Consensus 232 Va~~v~fL~S~~a~-~itG~~i~vDGG 257 (259)
T d1ja9a_ 232 IGRAVSALCQEESE-WINGQVIKLTGG 257 (259)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCceEEeCCC
Confidence 99999998874332 223778888776
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.67 E-value=1.1e-16 Score=147.21 Aligned_cols=223 Identities=13% Similarity=0.076 Sum_probs=148.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||+++++.|+++| .+|++..|+.++. ++..++ .+.++.
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~---~~~~~~---------------------~~~~~~ 54 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREERLL---AEAVAA---------------------LEAEAI 54 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHT---------------------CCSSEE
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHH---------------------cCCceE
Confidence 3789999999999999999999999999 5668888876432 222211 246788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhcc-CCceEEEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCV-KLKVFVHV 160 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~-~~~~~v~~ 160 (399)
++++|+++++...+..+.....+.++|++||+|+.... .+.++..+++|+.+...+.+++.+.. +.+.++.+
T Consensus 55 ~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ 134 (241)
T d2a4ka1 55 AVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 134 (241)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeec
Confidence 99999997653222222222334679999999987532 25678889999999999999887642 33444445
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.+.... +....|+.+|+..|.
T Consensus 135 ss~a~~~~---------------------------------------------------------~~~~~Y~~sK~al~~ 157 (241)
T d2a4ka1 135 GSVAGLGA---------------------------------------------------------FGLAHYAAGKLGVVG 157 (241)
T ss_dssp CCCTTCCH---------------------------------------------------------HHHHHHHHCSSHHHH
T ss_pred cccccccc---------------------------------------------------------cCccccchhhHHHHH
Confidence 54432110 012469999999999
Q ss_pred HHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHH
Q 015874 241 LMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVA 315 (399)
Q Consensus 241 ~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~ 315 (399)
+.+.. ..|+++..+.||.|-.+.. .... .......... . ...-+...+|+|+++..+
T Consensus 158 lt~~lA~el~~~gIrvN~I~PG~v~T~~~-------~~~~--~~~~~~~~~~----~-----p~~r~~~p~dva~~v~fL 219 (241)
T d2a4ka1 158 LARTLALELARKGVRVNVLLPGLIQTPMT-------AGLP--PWAWEQEVGA----S-----PLGRAGRPEEVAQAALFL 219 (241)
T ss_dssp HHHHHHHHHTTTTCEEEEEEECSBCCGGG-------TTSC--HHHHHHHHHT----S-----TTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhCCEEeeeccCcCCCHHH-------Hhhh--HhHHHHHHhC----C-----CCCCCcCHHHHHHHHHHH
Confidence 99866 5689999999999855432 1110 1112222211 1 112355789999999999
Q ss_pred HHhccCCCCCCcEEEecCC
Q 015874 316 MVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 316 ~~~~~~~~~~~~~yni~~~ 334 (399)
+..... --.|..+.+.++
T Consensus 220 ~S~~s~-~itG~~i~vDGG 237 (241)
T d2a4ka1 220 LSEESA-YITGQALYVDGG 237 (241)
T ss_dssp HSGGGT-TCCSCEEEESTT
T ss_pred hcchhC-CCcCceEEeCCC
Confidence 864322 122678888777
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.7e-16 Score=144.90 Aligned_cols=218 Identities=15% Similarity=0.116 Sum_probs=142.3
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
++.++||+||||||++.||.++++.|+++| .+|+...|+.++. ++..+++.+ .....+
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G---~~Vv~~~r~~~~l---~~~~~~l~~----------------~~~~~~ 62 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGNI---EELAAECKS----------------AGYPGT 62 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHH---HHHHHHHHH----------------TTCSSE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHHHHHh----------------cCCCce
Confidence 356899999999999999999999999999 5567777875432 332222211 011357
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----c-CC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----V-KL 154 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~-~~ 154 (399)
+.++++|+++++...+..+...+.+.++|++||+|+.... .+.++..+++|+.+...+.+.+.+. + ..
T Consensus 63 ~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T d1xg5a_ 63 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDD 142 (257)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCS
T ss_pred EEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCC
Confidence 8899999997654322233333345679999999997532 3678889999999999888776432 1 24
Q ss_pred ceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 155 ~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++|++||.+.+...+ ......|+.+
T Consensus 143 g~Ii~isS~~~~~~~p------------------------------------------------------~~~~~~Y~~s 168 (257)
T d1xg5a_ 143 GHIININSMSGHRVLP------------------------------------------------------LSVTHFYSAT 168 (257)
T ss_dssp CEEEEECCGGGTSCCS------------------------------------------------------CGGGHHHHHH
T ss_pred CceEEEechHhcCCCC------------------------------------------------------CcccHHHHHH
Confidence 6899999986432111 0112459999
Q ss_pred HHHHHHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHH
Q 015874 235 KTMGEMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDM 307 (399)
Q Consensus 235 K~~~E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 307 (399)
|...+.+.+.. ..++++..+.||.+-.+.... +.+. ....... .. ....++..+|
T Consensus 169 Kaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~---~~~~--~~~~~~~--------~~-----~~~r~~~ped 230 (257)
T d1xg5a_ 169 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK---LHDK--DPEKAAA--------TY-----EQMKCLKPED 230 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH---HTTT--CHHHHHH--------HH-----C---CBCHHH
T ss_pred HHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhh---cChh--hHHHHHh--------cC-----CCCCCcCHHH
Confidence 99999888644 357999999998775432200 0000 0000000 01 1223567899
Q ss_pred HHHHHHHHHHh
Q 015874 308 VVNAMIVAMVA 318 (399)
Q Consensus 308 va~~i~~~~~~ 318 (399)
+|++++.++..
T Consensus 231 vA~~v~fL~s~ 241 (257)
T d1xg5a_ 231 VAEAVIYVLST 241 (257)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhCC
Confidence 99999998863
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.66 E-value=3.9e-16 Score=143.31 Aligned_cols=202 Identities=15% Similarity=0.149 Sum_probs=139.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcC----eEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVK----KLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~----~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
+.||||||++.||.++++.|+++|+++. .|....|+.+.. +...+++. ..+.++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l---~~~~~~~~------------------~~g~~~~ 60 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL---EKISLECR------------------AEGALTD 60 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH---HHHHHHHH------------------TTTCEEE
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHH---HHHHHHHH------------------hcCCcEE
Confidence 3589999999999999999999997621 256666665432 22222220 1245788
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
++.+|+++++......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++..++|
T Consensus 61 ~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 140 (240)
T d2bd0a1 61 TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF 140 (240)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence 99999997654322233333345579999999997642 3678889999999999999887663 2456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+... .....|+.+|...
T Consensus 141 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK~al 164 (240)
T d2bd0a1 141 FITSVAATKAF--------------------------------------------------------RHSSIYCMSKFGQ 164 (240)
T ss_dssp EECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EEechhhcCCC--------------------------------------------------------CCChHHHHHHHHH
Confidence 99988644321 2235799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.+.. ..|+++..+.||.|-.+..+..+ + . ....+..-+|+|++++
T Consensus 165 ~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~---~---------------~---------~~~~~~~PedvA~~v~ 217 (240)
T d2bd0a1 165 RGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---D---------------E---------MQALMMMPEDIAAPVV 217 (240)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---S---------------T---------TGGGSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC---H---------------h---------hHhcCCCHHHHHHHHH
Confidence 9888765 56899999999998664321100 0 0 0112345689999999
Q ss_pred HHHHh
Q 015874 314 VAMVA 318 (399)
Q Consensus 314 ~~~~~ 318 (399)
.++..
T Consensus 218 ~l~s~ 222 (240)
T d2bd0a1 218 QAYLQ 222 (240)
T ss_dssp HHHTS
T ss_pred HHHcC
Confidence 98863
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.65 E-value=3.7e-16 Score=148.29 Aligned_cols=235 Identities=16% Similarity=0.159 Sum_probs=153.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID------SAALRFQNEVLAKDVFNVLKEKWGTRLNSFI 83 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (399)
++||++|||||++.||+++++.|+++| .+|.+..|..+.. ..+++..+++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~G---a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~--------------------- 60 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEI--------------------- 60 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHH---------------------
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchhhhhhhhHHHHHHHHHHH---------------------
Confidence 689999999999999999999999999 4557766654321 1223332222
Q ss_pred cCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cC
Q 015874 84 SEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VK 153 (399)
Q Consensus 84 ~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~ 153 (399)
..+...+.+|+++.+......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++
T Consensus 61 ~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 140 (302)
T d1gz6a_ 61 RRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN 140 (302)
T ss_dssp HHTTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC
Confidence 1233445677776543221222222344579999999997642 2578889999999999999987653 35
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..++|++||....... .....|+.
T Consensus 141 ~G~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 164 (302)
T d1gz6a_ 141 YGRIIMTASASGIYGN--------------------------------------------------------FGQANYSA 164 (302)
T ss_dssp CEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEeCChhhcCCC--------------------------------------------------------CCcHHHHH
Confidence 5799999997643211 12357999
Q ss_pred hHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHH
Q 015874 234 TKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMV 308 (399)
Q Consensus 234 sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 308 (399)
+|...+.+.+.. ..|+++..+.||.+-...... .. . .....+..+|+
T Consensus 165 sKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~----~~------~------------------~~~~~~~Pedv 216 (302)
T d1gz6a_ 165 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV----MP------E------------------DLVEALKPEYV 216 (302)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG----SC------H------------------HHHHHSCGGGT
T ss_pred HHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc----Cc------H------------------hhHhcCCHHHH
Confidence 999999998866 568999999999764322210 00 0 01112234789
Q ss_pred HHHHHHHHHhccCCCCCCcEEEecCC-----------------CCCcccHHHHHHHHHHhhcc
Q 015874 309 VNAMIVAMVAHAKQPSDANIYHVGSS-----------------LRNPVTLVSILDYGFVYFTK 354 (399)
Q Consensus 309 a~~i~~~~~~~~~~~~~~~~yni~~~-----------------~~~~~s~~el~~~l~~~~~~ 354 (399)
|.+++.++.... .-.|.++.+.++ ...+.|..++++.+.+....
T Consensus 217 A~~v~fL~S~~a--~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~ 277 (302)
T d1gz6a_ 217 APLVLWLCHESC--EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF 277 (302)
T ss_dssp HHHHHHHTSTTC--CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred HHHHHHHcCCCc--CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence 999998875322 223566655442 01346778888888777653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=6.7e-16 Score=142.18 Aligned_cols=225 Identities=10% Similarity=0.026 Sum_probs=149.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||+++++.|+++| .+|.+..|++++.+.. .+ ...+.
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G---~~Vi~~~r~~~~l~~~----------------~~----------~~~~~ 53 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINESKLQEL----------------EK----------YPGIQ 53 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHGGG----------------GG----------STTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHH----------------Hh----------ccCCc
Confidence 4899999999999999999999999999 5568888865332111 11 24567
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEE
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFV 158 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v 158 (399)
....|+...+ ..+.....+.++|++||+||.... .+.++..+++|+.++..+.+++.+. .+..++|
T Consensus 54 ~~~~d~~~~~----~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii 129 (245)
T d2ag5a1 54 TRVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNII 129 (245)
T ss_dssp EEECCTTCHH----HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eeeeeccccc----cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceee
Confidence 7788887422 222222344579999999997643 2578888999999999999887652 3456899
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||....- . +......|+.+|...
T Consensus 130 ~isS~~~~~--~-----------------------------------------------------~~~~~~~Y~~sKaal 154 (245)
T d2ag5a1 130 NMSSVASSV--K-----------------------------------------------------GVVNRCVYSTTKAAV 154 (245)
T ss_dssp EECCSBTTT--B-----------------------------------------------------CCTTBHHHHHHHHHH
T ss_pred eeechhhcc--C-----------------------------------------------------CccchhHHHHHHHHH
Confidence 998764210 0 012245799999999
Q ss_pred HHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 239 EMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 239 E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+++.. ..|+++..+.||.|-++.... .................. ....-+...+|+|+++.
T Consensus 155 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~---------~pl~R~~~pedva~~v~ 222 (245)
T d2ag5a1 155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKR---------QKTGRFATAEEIAMLCV 222 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHT---------CTTSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhhhhhhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 9999866 568999999999987643210 000000000111111110 11223677899999999
Q ss_pred HHHHhccCCCCCCcEEEecCC
Q 015874 314 VAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~~ 334 (399)
.++.... .--.|..+.+.++
T Consensus 223 fL~s~~s-~~iTG~~i~VDGG 242 (245)
T d2ag5a1 223 YLASDES-AYVTGNPVIIDGG 242 (245)
T ss_dssp HHHSGGG-TTCCSCEEEECTT
T ss_pred HHhChhh-CCCcCceEEeCCC
Confidence 9886332 2223788888887
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.63 E-value=2.7e-15 Score=141.31 Aligned_cols=231 Identities=13% Similarity=0.087 Sum_probs=146.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA-ALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
..++||++|||||+|.||+++++.|+++| .+|.+..|+.++... .+++.+ + .+.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~G---a~Vii~~r~~~~l~~~~~~l~~-------------~--------~g~~ 76 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDVLKATAEQISS-------------Q--------TGNK 76 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------H--------HSSC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHH-------------h--------cCCc
Confidence 57999999999999999999999999999 566888887654322 122211 1 2467
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc----cCCc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC----VKLK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~----~~~~ 155 (399)
+.++.+|+++++......+.....+.++|++||+||.... .+.+...+.+|..+...+...+... ....
T Consensus 77 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T d1w6ua_ 77 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA 156 (294)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccc
Confidence 8899999997543222222223344679999999997543 2446666777887777775543321 2344
Q ss_pred eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhH
Q 015874 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTK 235 (399)
Q Consensus 156 ~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 235 (399)
.++.+||.+..... .....|+.+|
T Consensus 157 ~i~~~ss~~~~~~~--------------------------------------------------------~~~~~YsasK 180 (294)
T d1w6ua_ 157 AFLSITTIYAETGS--------------------------------------------------------GFVVPSASAK 180 (294)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHHH
T ss_pred cccccccchhhhcc--------------------------------------------------------cccchHHHHH
Confidence 56666665432211 2235699999
Q ss_pred HHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHH
Q 015874 236 TMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVN 310 (399)
Q Consensus 236 ~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 310 (399)
...+.+.+.. ..|+++..+.||.|-.+...... .... ......... .+ ..-+...+|+|+
T Consensus 181 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~~~---~~~~~~~~~----~p-----l~R~~~pediA~ 245 (294)
T d1w6ua_ 181 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---DPTG---TFEKEMIGR----IP-----CGRLGTVEELAN 245 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---CTTS---HHHHHHHTT----CT-----TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc---CCcH---HHHHHHhhc----CC-----CCCCCCHHHHHH
Confidence 9999999866 56899999999999775532111 1000 112222211 11 122456799999
Q ss_pred HHHHHHHhccCCCCCCcEEEecCC
Q 015874 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
++..++..... --.|.+..+.++
T Consensus 246 ~v~fL~sd~s~-~itG~~i~vDGG 268 (294)
T d1w6ua_ 246 LAAFLCSDYAS-WINGAVIKFDGG 268 (294)
T ss_dssp HHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHhCchhc-CCCCcEEEECCC
Confidence 99998863322 223788999887
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.62 E-value=1e-14 Score=134.16 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=122.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+||||||++.||.+++++|++.+.+-.+|++.+|+.++.+.++.+.+ ...++.++
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~----------------------~~~~~~~~ 58 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK----------------------NHSNIHIL 58 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH----------------------HCTTEEEE
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh----------------------cCCcEEEE
Confidence 46899999999999999999998532222677999999877654433221 13689999
Q ss_pred eccCCCCCCCCCchhhHHHH--hcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc---------
Q 015874 91 PGDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC--------- 151 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~--~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~--------- 151 (399)
.+|+++++......+.++.. ..++|++||+||.... .+.++..+++|+.++..+++++...
T Consensus 59 ~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~ 138 (248)
T d1snya_ 59 EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANE 138 (248)
T ss_dssp ECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccc
Confidence 99999876432222222222 2469999999997432 1347778999999999998876542
Q ss_pred -----cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 152 -----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 152 -----~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
.+..++|.+||....-.. . +..
T Consensus 139 ~~~~~~~~g~ii~i~S~~g~~~~------~-----------------------------------------------~~~ 165 (248)
T d1snya_ 139 SQPMGVGRAAIINMSSILGSIQG------N-----------------------------------------------TDG 165 (248)
T ss_dssp TSCSSTTTCEEEEECCGGGCSTT------C-----------------------------------------------CSC
T ss_pred cccccccccccccccccccccCC------C-----------------------------------------------CCC
Confidence 024578888886422110 0 012
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecC
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~ 262 (399)
....|+.||.+...+.+.. ..|+++..+.||.|-.+
T Consensus 166 ~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 166 GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 2347999999999888765 56899999999988654
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.62 E-value=9.6e-15 Score=134.91 Aligned_cols=206 Identities=20% Similarity=0.156 Sum_probs=141.3
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.+|-++.+||||||+|.||.++++.|+++|.. .|....|+.......+...+++. ..+.+
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~------------------~~g~~ 63 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELE------------------ALGAR 63 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHH------------------HTTCE
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCccCHHHHHHHHHHHH------------------hcccc
Confidence 45677899999999999999999999999953 36777887544333333332221 02467
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhc------CccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhccC
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWN------ELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKCVK 153 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~------~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~~~ 153 (399)
+.++.+|++++ +....+.+ .+|.|+|+|+.... .+.+...++.|+.+..++.++.... +
T Consensus 64 v~~~~~Dv~d~-------~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~ 135 (259)
T d2fr1a1 64 TTVAACDVTDR-------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-D 135 (259)
T ss_dssp EEEEECCTTCH-------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-C
T ss_pred ccccccccchH-------HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-C
Confidence 99999999964 33333332 48999999997643 2456777889999999999887774 6
Q ss_pred CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhH
Q 015874 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVF 233 (399)
Q Consensus 154 ~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 233 (399)
..+||++||+...-.. .....|+.
T Consensus 136 ~~~iv~~SS~a~~~g~--------------------------------------------------------~~~~~YaA 159 (259)
T d2fr1a1 136 LTAFVLFSSFASAFGA--------------------------------------------------------PGLGGYAP 159 (259)
T ss_dssp CSEEEEEEEHHHHTCC--------------------------------------------------------TTCTTTHH
T ss_pred CceEeeecchhhccCC--------------------------------------------------------cccHHHHH
Confidence 7889999988643321 11356999
Q ss_pred hHHHHHHHHHHh-hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 234 TKTMGEMLMQQS-KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 234 sK~~~E~~l~~~-~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
+|...+.+.++. ..|++++.+.||.+.+.+. ... .... .+-. .-...+..+++++++
T Consensus 160 aka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~------~~~------~~~~-------~~~~---~G~~~~~~~~~~~~l 217 (259)
T d2fr1a1 160 GNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM------AEG------PVAD-------RFRR---HGVIEMPPETACRAL 217 (259)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------CTT---TTEECBCHHHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCEEECCCCcccCCcc------ccc------hHHH-------HHHh---cCCCCCCHHHHHHHH
Confidence 999999988877 7899999999998876432 110 0000 0001 113456789999999
Q ss_pred HHHHHh
Q 015874 313 IVAMVA 318 (399)
Q Consensus 313 ~~~~~~ 318 (399)
..++..
T Consensus 218 ~~~l~~ 223 (259)
T d2fr1a1 218 QNALDR 223 (259)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 988874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.61 E-value=2.5e-15 Score=138.74 Aligned_cols=224 Identities=13% Similarity=0.084 Sum_probs=145.6
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
++|||||++.||.++++.|+++| .+|.+..|+.+....++... ..+..+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G---a~V~i~~r~~~~~~~~~~~~---------------------------~~~~~~d 51 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQKDELEAFA---------------------------ETYPQLK 51 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSHHHHHHHH---------------------------HHCTTSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhhh---------------------------CcEEEec
Confidence 79999999999999999999999 55677777765443322211 1134578
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccC-c-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEec
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITK-F-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVST 162 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS 162 (399)
+++++......+...+.+.++|++||+||... . .++++..+++|+.+...+.+++.+. ++..++|++||
T Consensus 52 v~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS 131 (252)
T d1zmta1 52 PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITS 131 (252)
T ss_dssp ECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccc
Confidence 88765433223333344568999999998642 1 2568888999999999998877553 34578999999
Q ss_pred ceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHH
Q 015874 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLM 242 (399)
Q Consensus 163 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (399)
....... .....|+.+|...+.+.
T Consensus 132 ~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~lt 155 (252)
T d1zmta1 132 ATPFGPW--------------------------------------------------------KELSTYTSARAGACTLA 155 (252)
T ss_dssp STTTSCC--------------------------------------------------------TTCHHHHHHHHHHHHHH
T ss_pred ccccccc--------------------------------------------------------ccccccccccccHHHHH
Confidence 8643321 12357999999999998
Q ss_pred HHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHH
Q 015874 243 QQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMV 317 (399)
Q Consensus 243 ~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~ 317 (399)
+.. ..|+++..+.||.|-.+....... ................ ..+ ..-+...+|+|+++..++.
T Consensus 156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~e~~~~~~~----~~p-----l~R~g~pedvA~~v~fL~S 225 (252)
T d1zmta1 156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYP-TEPWKTNPEHVAHVKK----VTA-----LQRLGTQKELGELVAFLAS 225 (252)
T ss_dssp HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB-HHHHTTCHHHHHHHHH----HSS-----SSSCBCHHHHHHHHHHHHT
T ss_pred HHHHHHhcccCcEEEEEecCCCcCcchhhhhh-cccccCCHHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHhC
Confidence 866 668999999999997754411100 0000000111111111 111 1125678899999999886
Q ss_pred hccCCCCCCcEEEecCC
Q 015874 318 AHAKQPSDANIYHVGSS 334 (399)
Q Consensus 318 ~~~~~~~~~~~yni~~~ 334 (399)
... .--.|..+.+.++
T Consensus 226 ~~s-~~iTG~~i~vdGG 241 (252)
T d1zmta1 226 GSC-DYLTGQVFWLAGG 241 (252)
T ss_dssp TSC-GGGTTCEEEESTT
T ss_pred chh-cCCcCCeEEECCC
Confidence 322 2123788989887
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.60 E-value=2.2e-15 Score=138.90 Aligned_cols=178 Identities=12% Similarity=0.114 Sum_probs=118.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
|+.|+||||||++.||.+++++|+++|+.+ .|+..+|+.++.+.+ . .....++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~~~~l---~---------------------~~~~~~~~~ 55 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATEL---K---------------------SIKDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHH---H---------------------TCCCTTEEE
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHHHHHH---H---------------------HhhCCceEE
Confidence 467999999999999999999999999653 577778887554221 1 112468999
Q ss_pred EeccCCCCCCCCCchhhHHHHhc--CccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc------c-
Q 015874 90 VPGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC------V- 152 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~------~- 152 (399)
+.+|+++++......+.+.+.+. ++|++||+||.... .+.++..+++|+.|+..+.+++.+. .
T Consensus 56 ~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~ 135 (250)
T d1yo6a1 56 LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKE 135 (250)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSS
T ss_pred EEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCC
Confidence 99999975432222222222222 48999999997421 2457788999999999998876542 0
Q ss_pred -------CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 015874 153 -------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (399)
Q Consensus 153 -------~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (399)
....++.+|+......... .. ...
T Consensus 136 ~~~~~~~~~~~~i~~s~~~~~~~~~~--~~-----------------------------------------------~~~ 166 (250)
T d1yo6a1 136 SGDQLSVSRAAVITISSGLGSITDNT--SG-----------------------------------------------SAQ 166 (250)
T ss_dssp CSSCCCTTTCEEEEECCGGGCSTTCC--ST-----------------------------------------------TSS
T ss_pred CCccccceeccccccccccccccCCc--cc-----------------------------------------------ccc
Confidence 1234566665533321110 00 001
Q ss_pred CCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceec
Q 015874 226 GWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSG 261 (399)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G 261 (399)
.+...|+.||++...+.+.. ..|+++..+.||.|-.
T Consensus 167 ~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T 207 (250)
T d1yo6a1 167 FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCC
Confidence 22346999999999888765 5689999999998754
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.3e-14 Score=136.23 Aligned_cols=171 Identities=11% Similarity=0.116 Sum_probs=124.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|.||||||++.||.++++.|+++|.+|..|....|+.+....+....+++ ...+.++.++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~------------------~~~~~~~~~~~ 63 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL------------------ACPPGSLETLQ 63 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT------------------TCCTTSEEEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHH------------------hccCCceEEEe
Confidence 367899999999999999999999988877777777654433333222211 11246889999
Q ss_pred ccCCCCCCCCCchhhHHHHh-----cCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc---cCCce
Q 015874 92 GDISSEDLGLKDSNLKEELW-----NELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC---VKLKV 156 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~-----~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~ 156 (399)
+|+++++ ....+. ..+|+++|+|+.... .+.++..+++|+.|+.++.+++.+. ++..+
T Consensus 64 ~Dv~~~~-------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~ 136 (285)
T d1jtva_ 64 LDVRDSK-------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR 136 (285)
T ss_dssp CCTTCHH-------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccccchH-------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCc
Confidence 9999643 332332 358999999997642 2568888999999999999887653 35678
Q ss_pred EEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHH
Q 015874 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKT 236 (399)
Q Consensus 157 ~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (399)
+|++||+...... +....|+.+|+
T Consensus 137 Iv~isS~~g~~~~--------------------------------------------------------~~~~~Y~asKa 160 (285)
T d1jtva_ 137 VLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASKF 160 (285)
T ss_dssp EEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred eEEEechhhcCCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999988543211 22357999999
Q ss_pred HHHHHHHHh-----hCCCcEEEEecCceecCC
Q 015874 237 MGEMLMQQS-----KENLSLVIIRPTVVSGTY 263 (399)
Q Consensus 237 ~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~ 263 (399)
..+.+.+.. ..|+++..+.||.|-.+.
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~~ 192 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence 999888766 568999999999987643
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.57 E-value=2.4e-14 Score=132.40 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=123.1
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHH---hCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILR---VQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFIS 84 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~---~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
+.|+||.++||||++.||.++++.|.+ +| .+|.+..|+.++. +...+++. .+ ..+
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G---~~Vv~~~r~~~~l---~~~~~~l~---------~~-------~~~ 59 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESML---RQLKEELG---------AQ-------QPD 59 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHHH---HHHHHHHH---------HH-------CTT
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCC---CEEEEEECCHHHH---HHHHHHHH---------hh-------cCC
Confidence 468999999999999999999999975 67 6678888876543 22222221 11 123
Q ss_pred CceEEEeccCCCCCCCCCchhhHHHH----hcCccEEEEcccccCc----------cccHHHHHHHhHHHHHHHHHHHHh
Q 015874 85 EKITFVPGDISSEDLGLKDSNLKEEL----WNELDIMVNSAAITKF----------DERYDVAFGINTLGVIHLVNFAKK 150 (399)
Q Consensus 85 ~~i~~~~gDl~~~~~~~~~~~~~~~~----~~~~D~Vih~Aa~~~~----------~~~~~~~~~~n~~~~~~ll~~a~~ 150 (399)
.++.++++|+++++......+...+. ....|++||+||.... .+.++..+++|+.++..+.+++.+
T Consensus 60 ~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 139 (259)
T d1oaaa_ 60 LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN 139 (259)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 57899999999643211111111111 1246899999986421 145788899999999999998876
Q ss_pred c-cC----CceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccC
Q 015874 151 C-VK----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLH 225 (399)
Q Consensus 151 ~-~~----~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (399)
. .. ..++|++||.......
T Consensus 140 ~m~~~~~~~g~Iv~isS~~~~~~~-------------------------------------------------------- 163 (259)
T d1oaaa_ 140 AFQDSPGLSKTVVNISSLCALQPY-------------------------------------------------------- 163 (259)
T ss_dssp TSCCCTTCEEEEEEECCGGGTSCC--------------------------------------------------------
T ss_pred HHHhcCCCcccccccccccccCCC--------------------------------------------------------
Confidence 4 21 2478999987543321
Q ss_pred CCCchhhHhHHHHHHHHHHh---hCCCcEEEEecCceecC
Q 015874 226 GWPNTYVFTKTMGEMLMQQS---KENLSLVIIRPTVVSGT 262 (399)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~---~~~~~~~i~Rp~~V~G~ 262 (399)
.....|+.+|...+.+.+.. ..++++..+.||.|-.+
T Consensus 164 ~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 22357999999999998877 56899999999988764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.57 E-value=1.4e-14 Score=132.21 Aligned_cols=205 Identities=11% Similarity=0.050 Sum_probs=133.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+||+||||||+|.||.++++.|+++| .+|.++.|..... ......+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G---~~V~~~~~~~~~~-------------------------------~~~~~~~ 46 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEE-------------------------------ASASVIV 46 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTT-------------------------------SSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------------cccccee
Confidence 58999999999999999999999999 4557776655432 1223344
Q ss_pred eccCCCCCCCCCchhhHHHHhc--CccEEEEcccccC---c-----cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEE
Q 015874 91 PGDISSEDLGLKDSNLKEELWN--ELDIMVNSAAITK---F-----DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVH 159 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~--~~D~Vih~Aa~~~---~-----~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~ 159 (399)
..|..+.+.............. ++|++||+||... . .+.++..+++|+.++.++.+++.+. ++..++|+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~ 126 (236)
T d1dhra_ 47 KMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTL 126 (236)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeE
Confidence 4444422110001111112222 5899999998431 1 2457778999999999999988763 44568999
Q ss_pred EecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHH
Q 015874 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGE 239 (399)
Q Consensus 160 ~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (399)
+||.+..... .....|+.||...+
T Consensus 127 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 150 (236)
T d1dhra_ 127 AGAKAALDGT--------------------------------------------------------PGMIGYGMAKGAVH 150 (236)
T ss_dssp ECCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred EccHHHcCCc--------------------------------------------------------cCCcccHHHHHHHH
Confidence 9998643321 12357999999999
Q ss_pred HHHHHh----h---CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHH
Q 015874 240 MLMQQS----K---ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAM 312 (399)
Q Consensus 240 ~~l~~~----~---~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i 312 (399)
.+.+.. . .|+++..+.||.|..+.. .... +. ...-.++..+++|+.+
T Consensus 151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------------~~~~-------~~--~~~~~~~~pe~va~~~ 204 (236)
T d1dhra_ 151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------------RKSM-------PE--ADFSSWTPLEFLVETF 204 (236)
T ss_dssp HHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------------HHHS-------TT--SCGGGSEEHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------------hhhC-------cc--chhhcCCCHHHHHHHH
Confidence 999876 1 479999999998866321 1111 11 1123467889999999
Q ss_pred HHHHHhccCCCCCCcEEEec
Q 015874 313 IVAMVAHAKQPSDANIYHVG 332 (399)
Q Consensus 313 ~~~~~~~~~~~~~~~~yni~ 332 (399)
..++.... ..-.|..+.+.
T Consensus 205 ~~l~s~~~-~~i~G~~i~v~ 223 (236)
T d1dhra_ 205 HDWITGNK-RPNSGSLIQVV 223 (236)
T ss_dssp HHHHTTTT-CCCTTCEEEEE
T ss_pred HHHhCCCc-cCCCCCeEEEE
Confidence 99886432 22225555553
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=2.5e-14 Score=133.18 Aligned_cols=206 Identities=13% Similarity=0.137 Sum_probs=138.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
..++||+||||||++.||.+++++|+++| .+|.+..|+.+..+. ..+++. ......+
T Consensus 10 ~~L~GK~alITGassGIG~aiA~~la~~G---~~Vil~~r~~~~l~~---~~~~~~-----------------~~~~~~~ 66 (269)
T d1xu9a_ 10 EMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKETLQK---VVSHCL-----------------ELGAASA 66 (269)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHH---HHHHHH-----------------HHTCSEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHH---HHHHHh-----------------hhhcccc
Confidence 34899999999999999999999999999 567899997654322 222110 1124577
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc--cCCceEE
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC--VKLKVFV 158 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~--~~~~~~v 158 (399)
..+..|+.+........+.........|+++|+|+.... .+.+...+++|+.+...+.+.+.+. ++..++|
T Consensus 67 ~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii 146 (269)
T d1xu9a_ 67 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 146 (269)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcce
Confidence 788889885432111122222234568999999987532 2567778999999999998887653 2346889
Q ss_pred EEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHH
Q 015874 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMG 238 (399)
Q Consensus 159 ~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (399)
++||.+.+... .....|+.||+..
T Consensus 147 ~isS~~~~~~~--------------------------------------------------------p~~~~Y~asKaal 170 (269)
T d1xu9a_ 147 VVSSLAGKVAY--------------------------------------------------------PMVAAYSASKFAL 170 (269)
T ss_dssp EEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EeccchhcCCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 98887633211 2235799999999
Q ss_pred HHHHHHh-------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHH
Q 015874 239 EMLMQQS-------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNA 311 (399)
Q Consensus 239 E~~l~~~-------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 311 (399)
+.+.+.. ..++++..+.||.|-.+ +......+ .........+++|+.
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-----------------~~~~~~~~---------~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-----------------TAMKAVSG---------IVHMQAAPKEECALE 224 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-----------------HHHHHSCG---------GGGGGCBCHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-----------------HHHHhccC---------CccccCCCHHHHHHH
Confidence 9888765 13588999999987542 11111111 112334567899999
Q ss_pred HHHHHHh
Q 015874 312 MIVAMVA 318 (399)
Q Consensus 312 i~~~~~~ 318 (399)
++..+..
T Consensus 225 i~~~~~~ 231 (269)
T d1xu9a_ 225 IIKGGAL 231 (269)
T ss_dssp HHHHHHT
T ss_pred HHHHhhc
Confidence 8887763
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.56 E-value=3.2e-14 Score=131.03 Aligned_cols=225 Identities=15% Similarity=0.162 Sum_probs=143.9
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.|+||+||||||+| .||+++++.|+++| .+|++..|+++.....+...+. ..+
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G---~~V~i~~~~~~~~~~~~~~~~~----------------------~~~ 56 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKLKGRVEEFAAQ----------------------LGS 56 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTTHHHHHHHHHH----------------------TTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHhh----------------------cCC
Confidence 47899999999999 79999999999999 5567778875443332222211 245
Q ss_pred eEEEeccCCCCCCCCCchhhHHH---HhcCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEE---LWNELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~---~~~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
...+..|+.+... ..+.... ....+|++||+|+.... .+.+......|+.+...+.+.+...
T Consensus 57 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (258)
T d1qsga_ 57 DIVLQCDVAEDAS---IDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 133 (258)
T ss_dssp CCEEECCTTCHHH---HHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cceeecccchHHH---HHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6677788875321 1111111 22358999999987532 1234555677888888888887764
Q ss_pred -cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCch
Q 015874 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNT 230 (399)
Q Consensus 152 -~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
++...++++||.+.... .+....
T Consensus 134 ~~~~~~Ii~iss~~~~~~--------------------------------------------------------~~~~~~ 157 (258)
T d1qsga_ 134 LNPGSALLTLSYLGAERA--------------------------------------------------------IPNYNV 157 (258)
T ss_dssp EEEEEEEEEEECGGGTSB--------------------------------------------------------CTTTTH
T ss_pred ccCCcEEEEecchhhccC--------------------------------------------------------CCCcHH
Confidence 23456788888753221 122357
Q ss_pred hhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeH
Q 015874 231 YVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPV 305 (399)
Q Consensus 231 Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 305 (399)
|+.+|.+.+.+.+.. ..|+++..++||.|..+.... . ............ ..+ ..-+...
T Consensus 158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~---~----~~~~~~~~~~~~----~~p-----l~R~~~p 221 (258)
T d1qsga_ 158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG---I----KDFRKMLAHCEA----VTP-----IRRTVTI 221 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG---S----TTHHHHHHHHHH----HST-----TSSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc---c----chhhhHHHHHHh----CCC-----CCCCcCH
Confidence 999999999998866 568999999999998765411 1 111111212111 111 1125668
Q ss_pred HHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 306 ~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+|+|+++..++..... .-.+.++.+.++
T Consensus 222 eeia~~v~fL~s~~s~-~itG~~i~vDGG 249 (258)
T d1qsga_ 222 EDVGNSAAFLCSDLSA-GISGEVVHVDGG 249 (258)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CccCceEEECcC
Confidence 9999999998863322 223788888887
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=4.9e-14 Score=129.30 Aligned_cols=173 Identities=13% Similarity=0.155 Sum_probs=122.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||++|||||++.||.+++++|+++| .+|.+..|+.+..+.. .+++ ..+..
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~---~~~l---------------------~~~~~ 54 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSGGEAQ---AKKL---------------------GNNCV 54 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSSHHHH---HHHH---------------------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHHHH---HHHh---------------------CCCcc
Confidence 5899999999999999999999999999 5668888887654322 2222 35677
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------------cccHHHHHHHhHHHHHHHHHHHHhc----
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------------DERYDVAFGINTLGVIHLVNFAKKC---- 151 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------------~~~~~~~~~~n~~~~~~ll~~a~~~---- 151 (399)
....|+.+........+.........|.++++++.... .+.++..+++|+.++.++.+++.+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 134 (248)
T d2o23a1 55 FAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 134 (248)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHh
Confidence 77888885432111111222233468999988765321 2467788999999999999988653
Q ss_pred -----cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCC
Q 015874 152 -----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHG 226 (399)
Q Consensus 152 -----~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (399)
.+..++|++||.+.+... .
T Consensus 135 ~~~~~~~~G~Ii~isS~~~~~~~--------------------------------------------------------~ 158 (248)
T d2o23a1 135 EPDQGGQRGVIINTASVAAFEGQ--------------------------------------------------------V 158 (248)
T ss_dssp CCCTTSCCEEEEEECCTHHHHCC--------------------------------------------------------T
T ss_pred hhhccCCceEEEEecchhhccCC--------------------------------------------------------C
Confidence 123479999998654321 2
Q ss_pred CCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCC
Q 015874 227 WPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYK 264 (399)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~ 264 (399)
....|+.+|...+.+.+.. ..|+++..+.||.+..+..
T Consensus 159 ~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~ 201 (248)
T d2o23a1 159 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence 2357999999999999876 5689999999999876543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.54 E-value=4.1e-14 Score=128.97 Aligned_cols=206 Identities=11% Similarity=0.066 Sum_probs=133.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
..+||||||+|.||.+++++|+++| ++|+++.|++... ........
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G---~~V~~~~~~~~~~-------------------------------~~~~~~~~ 47 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQ-------------------------------ADSNILVD 47 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTT-------------------------------SSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCchhc-------------------------------ccccceec
Confidence 3579999999999999999999999 6678888876532 12334445
Q ss_pred ccCCCCCCCCCchhhHHHH--hcCccEEEEcccccCc--------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEEL--WNELDIMVNSAAITKF--------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~--~~~~D~Vih~Aa~~~~--------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~ 160 (399)
+|....+......+..... ..++|++||+||.... .+.++..+++|+.++..+.+++.+. ++-.++|++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~i 127 (235)
T d1ooea_ 48 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 127 (235)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEe
Confidence 6655322111111111122 2458999999995321 2456777999999999999888764 344689999
Q ss_pred ecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHH
Q 015874 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEM 240 (399)
Q Consensus 161 SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (399)
||.+..... .....|+.+|.+.+.
T Consensus 128 sS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~~ 151 (235)
T d1ooea_ 128 GAAAAMGPT--------------------------------------------------------PSMIGYGMAKAAVHH 151 (235)
T ss_dssp CCGGGGSCC--------------------------------------------------------TTBHHHHHHHHHHHH
T ss_pred ccHHhcCCc--------------------------------------------------------ccccchHHHHHHHHH
Confidence 987643321 123579999999999
Q ss_pred HHHHh--h-----CCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHH
Q 015874 241 LMQQS--K-----ENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMI 313 (399)
Q Consensus 241 ~l~~~--~-----~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~ 313 (399)
+.+.. + .++++..+.||.+-.+ +...... . .....++..+++++.++
T Consensus 152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------------~~~~~~~-------~--~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------------MNRKWMP-------N--ADHSSWTPLSFISEHLL 205 (235)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------------HHHHHST-------T--CCGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEEEecCcCcCc-----------------chhhhCc-------C--CccccCCCHHHHHHHHH
Confidence 99876 1 3678888898876431 1111111 1 12234678899999988
Q ss_pred HHHHhccCCCCCCcEEEecC
Q 015874 314 VAMVAHAKQPSDANIYHVGS 333 (399)
Q Consensus 314 ~~~~~~~~~~~~~~~yni~~ 333 (399)
.++.........+..+.+.+
T Consensus 206 ~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEEE
T ss_pred HHhcCccccCCCceEEEEEe
Confidence 76654433322356666643
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.9e-14 Score=132.99 Aligned_cols=131 Identities=18% Similarity=0.151 Sum_probs=94.6
Q ss_pred CcEE-EEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 12 NKTI-LVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 12 ~~~I-lVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
||+| |||||++.||.+++++|+++ | .+|.+.+|+.++.+.. .+++ .+ .+.++.+
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~~~~~---~~~l---------~~---------~~~~~~~ 57 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRGQAA---VQQL---------QA---------EGLSPRF 57 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHHHHH---HHHH---------HH---------TTCCCEE
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHHHHHH---HHHH---------Hh---------cCCcEEE
Confidence 6666 89999999999999999987 7 5678888987653222 2111 11 1357889
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------cccHHHHHHHhHHHHHHHHHHHHhc-cCCceEEEEe
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------DERYDVAFGINTLGVIHLVNFAKKC-VKLKVFVHVS 161 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~n~~~~~~ll~~a~~~-~~~~~~v~~S 161 (399)
+++|+++.+......+...+.+.++|++||+||.... .+.++..+++|+.++..+.+++.+. ++-.++|.+|
T Consensus 58 ~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis 137 (275)
T d1wmaa1 58 HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 137 (275)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 9999997654333333333445679999999997532 2457778999999999999998764 3446899999
Q ss_pred cceee
Q 015874 162 TAYVA 166 (399)
Q Consensus 162 S~~v~ 166 (399)
|....
T Consensus 138 S~~~~ 142 (275)
T d1wmaa1 138 SIMSV 142 (275)
T ss_dssp CHHHH
T ss_pred cccee
Confidence 97543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.50 E-value=3.3e-13 Score=125.25 Aligned_cols=228 Identities=14% Similarity=0.071 Sum_probs=136.7
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+|+||++|||||+| .||.+++++|+++| .+|.+..|++......+.+.++ ...
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~G---a~V~i~~r~~~~~~~~~~l~~~----------------------~~~ 56 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNESLEKRVRPIAQE----------------------LNS 56 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTTTHHHHHHHHHH----------------------TTC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHhh----------------------CCc
Confidence 57899999999987 79999999999999 5568888875433333333221 245
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-------c-ccHHHHH---HHhHHHHHHHHHHHHhccCCc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-------D-ERYDVAF---GINTLGVIHLVNFAKKCVKLK 155 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-------~-~~~~~~~---~~n~~~~~~ll~~a~~~~~~~ 155 (399)
..++..|+++.+...+..+.....+..+|++||+++.... . ....... ..+..+.........+..+..
T Consensus 57 ~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (274)
T d2pd4a1 57 PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 136 (274)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred eeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccC
Confidence 6678899996443221222222334579999999996532 1 1222222 222333444444443322233
Q ss_pred -eEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHh
Q 015874 156 -VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFT 234 (399)
Q Consensus 156 -~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 234 (399)
.++.+|+.+..... .....|+.+
T Consensus 137 ~~i~~~s~~~~~~~~--------------------------------------------------------~~~~~y~as 160 (274)
T d2pd4a1 137 ASVLTLSYLGSTKYM--------------------------------------------------------AHYNVMGLA 160 (274)
T ss_dssp EEEEEEECGGGTSBC--------------------------------------------------------TTCHHHHHH
T ss_pred cceeeeccccccccc--------------------------------------------------------ccchhhhHH
Confidence 34445555433321 234679999
Q ss_pred HHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHH
Q 015874 235 KTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVV 309 (399)
Q Consensus 235 K~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 309 (399)
|...+.+++.. ..|+++..+.||.+..+..... ... . ........ .. ...-+...+|+|
T Consensus 161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~---~~~-~---~~~~~~~~----~~-----p~~r~~~pedIA 224 (274)
T d2pd4a1 161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI---ADF-R---MILKWNEI----NA-----PLRKNVSLEEVG 224 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS---TTH-H---HHHHHHHH----HS-----TTSSCCCHHHHH
T ss_pred HHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc---Cch-H---HHHHHHhh----hh-----hccCCcCHHHHH
Confidence 99999988765 5789999999999987654211 110 1 11111111 00 122356789999
Q ss_pred HHHHHHHHhccCCCCCCcEEEecCC
Q 015874 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
+++..++.... .--.|.++.+.++
T Consensus 225 ~~v~fL~S~~s-~~itG~~i~vDGG 248 (274)
T d2pd4a1 225 NAGMYLLSSLS-SGVSGEVHFVDAG 248 (274)
T ss_dssp HHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHhChhh-CCCcCceEEECCC
Confidence 99999887432 2223789999888
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.41 E-value=3.6e-13 Score=124.41 Aligned_cols=235 Identities=13% Similarity=0.004 Sum_probs=137.9
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
.|+||+||||||+| .||.+++++|+++| .+|.+..|+..+. .+++.+ ..+.+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~G---a~Vil~~~~~~~~--~~~~~~---------------------~~~~~ 56 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRLRL--IQRITD---------------------RLPAK 56 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTT---CEEEEEECSCHHH--HHHHHT---------------------TSSSC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcC---CEEEEEeCChHHH--HHHHHH---------------------HcCCc
Confidence 58999999999765 59999999999999 5567777765321 122221 12466
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHh---cCccEEEEcccccCc------------cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELW---NELDIMVNSAAITKF------------DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~---~~~D~Vih~Aa~~~~------------~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
...+++|+++++......+.+...+ ..+|+++|+|+.... ...+...+..|+.+.....+.....
T Consensus 57 ~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (268)
T d2h7ma1 57 APLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 136 (268)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred eeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh
Confidence 7788999997543222222222233 348999999996421 1234445666677777666666654
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
.+...++.++|....... +....|
T Consensus 137 ~~~~~~i~~~s~~~~~~~--------------------------------------------------------p~~~~y 160 (268)
T d2h7ma1 137 MNPGGSIVGMDFDPSRAM--------------------------------------------------------PAYNWM 160 (268)
T ss_dssp EEEEEEEEEEECCCSSCC--------------------------------------------------------TTTHHH
T ss_pred cccccccccccccccccC--------------------------------------------------------cccchh
Confidence 233344444443322211 224579
Q ss_pred hHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCc---chHHHHHHHhhcCccccccCCCccccCee
Q 015874 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDL---KTINTLFVASAQGNLRCLVGETKVIMDVI 303 (399)
Q Consensus 232 ~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 303 (399)
+.+|...+.+.+.. ..++++..+.||.|-.+....+.+..... .....+...... ..+ -.+.+.
T Consensus 161 ~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------l~rr~~ 232 (268)
T d2h7ma1 161 TVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ-RAP-------IGWNMK 232 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH-HCT-------TCCCTT
T ss_pred hccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHh-cCC-------CCCCCC
Confidence 99999999998866 56899999999988764321100000000 000111111111 000 012345
Q ss_pred eHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 304 ~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
..+|+|+++..++.. ...--.|.++.+.++
T Consensus 233 ~p~dva~~v~fL~Sd-~a~~iTG~~i~vDGG 262 (268)
T d2h7ma1 233 DATPVAKTVCALLSD-WLPATTGDIIYADGG 262 (268)
T ss_dssp CCHHHHHHHHHHHSS-SCTTCCSEEEEESTT
T ss_pred CHHHHHHHHHHHhCc-hhcCccCCEEEECcC
Confidence 567999999998863 222223788888887
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.38 E-value=6.3e-12 Score=117.57 Aligned_cols=241 Identities=12% Similarity=0.066 Sum_probs=138.4
Q ss_pred hcCCcEEEEecCcc--hhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC-
Q 015874 9 FLENKTILVSGVTG--FVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISE- 85 (399)
Q Consensus 9 ~~~~~~IlVTGatG--~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 85 (399)
.|+||++|||||+| .||.++++.|+++| .+|.+..|+............. ..............
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~G---a~Vvi~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 71 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRRG----------KFDQSRVLPDGSLME 71 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHTT----------TTTGGGBCTTSSBCC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCchhhhhhHHHHHHh----------hhhhhhhhhhhhhhh
Confidence 37999999999987 89999999999999 5567777765332211111100 00000000000001
Q ss_pred --ceEEEeccCCCCC------------------CCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHH
Q 015874 86 --KITFVPGDISSED------------------LGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGI 136 (399)
Q Consensus 86 --~i~~~~gDl~~~~------------------~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~ 136 (399)
++..+..++.+.. ......+...+.+.++|++||+||... + .+.+...+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~v 151 (297)
T d1d7oa_ 72 IKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISA 151 (297)
T ss_dssp EEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHH
T ss_pred hhhhhhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccc
Confidence 1222222222111 100011222233568999999998642 1 2457788999
Q ss_pred hHHHHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHh
Q 015874 137 NTLGVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (399)
Q Consensus 137 n~~~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (399)
|+.+...+++++... ......+.+++.+.....
T Consensus 152 n~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------------------------------------- 185 (297)
T d1d7oa_ 152 SSYSFVSLLSHFLPIMNPGGASISLTYIASERII---------------------------------------------- 185 (297)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC----------------------------------------------
T ss_pred hhhhhhhhhhHHHHHhhcCCcceeeeehhhcccc----------------------------------------------
Confidence 999999999988764 223345555555432211
Q ss_pred hccccccccCCCCchhhHhHHHHHHHHHHh------hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCcc
Q 015874 216 NLGTERAKLHGWPNTYVFTKTMGEMLMQQS------KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNL 289 (399)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~------~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (399)
......|..+|...+.+++.. ..|+++..+.||.+..+..... .....+........
T Consensus 186 ---------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~- 248 (297)
T d1d7oa_ 186 ---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA- 248 (297)
T ss_dssp ---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS-
T ss_pred ---------cccccceecccccccccccccchhccccceEEecccccccccchhhhhc-------cCCHHHHHHHHhCC-
Confidence 022356999999888877654 3589999999999977654211 11112222222111
Q ss_pred ccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 290 RCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 290 ~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
| ..-+...+|+|+++..++..... --.|.++.+.++
T Consensus 249 ---P-----lgR~~~peevA~~v~fL~S~~a~-~itGq~i~vDGG 284 (297)
T d1d7oa_ 249 ---P-----IQKTLTADEVGNAAAFLVSPLAS-AITGATIYVDNG 284 (297)
T ss_dssp ---S-----SCCCBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred ---C-----CCCCCCHHHHHHHHHHHhCchhc-CCcCceEEECcC
Confidence 1 11246788999999998863322 223778888877
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.37 E-value=4.5e-12 Score=114.80 Aligned_cols=210 Identities=11% Similarity=0.096 Sum_probs=134.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.|++|||||++.||+++++.|+++| .+|.+..|+++. .+....+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~---------------------------------~~~~~~~ 44 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRREG---------------------------------EDLIYVE 44 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCccc---------------------------------ccceEee
Confidence 4899999999999999999999999 566888887653 3556778
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-----------cccHHHHHHHhHHHHHHHHHHHHhc---------
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-----------DERYDVAFGINTLGVIHLVNFAKKC--------- 151 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~n~~~~~~ll~~a~~~--------- 151 (399)
+|+++........+.. ......+.+++.++.... .+.++..++.|+.+...+++.+...
T Consensus 45 ~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T d1uaya_ 45 GDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123 (241)
T ss_dssp CCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred ccccchhhhHHHHHhh-hccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Confidence 8988543211111111 112245566666553211 2456777899999888887765432
Q ss_pred cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchh
Q 015874 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTY 231 (399)
Q Consensus 152 ~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 231 (399)
++..++|++||....... .....|
T Consensus 124 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T d1uaya_ 124 GQRGVIVNTASVAAFEGQ--------------------------------------------------------IGQAAY 147 (241)
T ss_dssp SCSEEEEEECCTHHHHCC--------------------------------------------------------TTCHHH
T ss_pred cCceeeeeecchhhccCC--------------------------------------------------------CCchhh
Confidence 123579999998644321 224579
Q ss_pred hHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHH
Q 015874 232 VFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVD 306 (399)
Q Consensus 232 ~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 306 (399)
+.+|...+.+.+.. ..|+++..+.||.|-.+.... .. ......... ..+ + ..-+...+
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~------~~~~~~~~~-~~~-~------~~R~g~pe 210 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG---LP------EKAKASLAA-QVP-F------PPRLGRPE 210 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT---SC------HHHHHHHHT-TCC-S------SCSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch---hh------hhHHHHHHh-cCC-C------CCCCcCHH
Confidence 99999999998866 568999999999986643211 00 011111111 111 0 01245678
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 307 Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
|+|+++..++.. .. -.|.++.+.++
T Consensus 211 dvA~~v~fL~s~-~~--iTG~~i~VDGG 235 (241)
T d1uaya_ 211 EYAALVLHILEN-PM--LNGEVVRLDGA 235 (241)
T ss_dssp HHHHHHHHHHHC-TT--CCSCEEEESTT
T ss_pred HHHHHHHHHHhC-CC--CCCCEEEECCc
Confidence 999999988862 21 23788888876
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.32 E-value=2.6e-11 Score=115.60 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=112.5
Q ss_pred CCcEEEEec--CcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 11 ENKTILVSG--VTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 11 ~~~~IlVTG--atG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
++|.+|||| ++..||.++++.|+++| .+|.+..|...........+.+-....... ..........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~G---A~V~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 68 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYNIFMKNYKNGKFDNDMII---------DKDKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECGGGHHHHHHHHHTTTTTGGGEE---------TTTEECCEEE
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcC---CEEEEEeCchhhhhhhHHHHHHhhhhHHHH---------HHHhhhhhhh
Confidence 478999999 55799999999999999 555666665533221111110000000000 0000001112
Q ss_pred EEec--------------------cCCCCCCCCCchhhHHHHhcCccEEEEcccccC-----c----cccHHHHHHHhHH
Q 015874 89 FVPG--------------------DISSEDLGLKDSNLKEELWNELDIMVNSAAITK-----F----DERYDVAFGINTL 139 (399)
Q Consensus 89 ~~~g--------------------Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~-----~----~~~~~~~~~~n~~ 139 (399)
.... |+.+.+......+...+.+.++|++||+||... + .+.+...+++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchh
Confidence 2222 333332211122233345578999999998642 1 2567888999999
Q ss_pred HHHHHHHHHHhc-cCCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcc
Q 015874 140 GVIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (399)
Q Consensus 140 ~~~~ll~~a~~~-~~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (399)
+...+.+.+.+. ++..++|.+||.+.....+
T Consensus 149 ~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p------------------------------------------------ 180 (329)
T d1uh5a_ 149 SLISLCKYFVNIMKPQSSIISLTYHASQKVVP------------------------------------------------ 180 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT------------------------------------------------
T ss_pred HHHHHHHHHHhhcccccccccceeehhccccc------------------------------------------------
Confidence 999999988774 3446788888775432110
Q ss_pred ccccccCCCCchhhHhHHHHHHHHHHh-----h-CCCcEEEEecCceecC
Q 015874 219 TERAKLHGWPNTYVFTKTMGEMLMQQS-----K-ENLSLVIIRPTVVSGT 262 (399)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~-~~~~~~i~Rp~~V~G~ 262 (399)
.+...|+.+|...+.+.+.. . +|+++..+.||.|-.+
T Consensus 181 -------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 181 -------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp -------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred -------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence 12346999999999999866 2 4899999999998653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.29 E-value=5.1e-11 Score=110.42 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=129.2
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
.+|||||++.||.++++.|+++| .+|.+..|+... ..+.+.+++. ++ .+.....+++|
T Consensus 4 VAlITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~--~~~~~~~~l~---------~~--------~~~~~~~~~~d 61 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAA--EANALSATLN---------AR--------RPNSAITVQAD 61 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH---------HH--------STTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCCHH--HHHHHHHHHH---------hh--------cCCceEEEEee
Confidence 68999999999999999999999 455666665432 1222222221 11 12344444444
Q ss_pred CCCCCCC----------CCchhhHHH-------HhcCccEEEEcccccCcc-------c--------------cHHHHHH
Q 015874 94 ISSEDLG----------LKDSNLKEE-------LWNELDIMVNSAAITKFD-------E--------------RYDVAFG 135 (399)
Q Consensus 94 l~~~~~~----------~~~~~~~~~-------~~~~~D~Vih~Aa~~~~~-------~--------------~~~~~~~ 135 (399)
....... +.+.+...+ .+.++|++||+||..... + .+...+.
T Consensus 62 ~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (284)
T d1e7wa_ 62 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 141 (284)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHh
Confidence 3322110 112222222 346799999999975321 1 1223577
Q ss_pred HhHHHHHHHHHHHHhc-------c--CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCC
Q 015874 136 INTLGVIHLVNFAKKC-------V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (399)
Q Consensus 136 ~n~~~~~~ll~~a~~~-------~--~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (399)
+|+.+...+.+.+.+. . ....++.+||......
T Consensus 142 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~-------------------------------------- 183 (284)
T d1e7wa_ 142 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP-------------------------------------- 183 (284)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC--------------------------------------
T ss_pred hheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCC--------------------------------------
Confidence 8888888888776442 1 1234555555532221
Q ss_pred hhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHH
Q 015874 207 QKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLF 281 (399)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~ 281 (399)
......|+.+|...+.+.+.. ..|+++..+.||.+-.... . .....
T Consensus 184 ------------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--------~---~~~~~ 234 (284)
T d1e7wa_ 184 ------------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--------M---PPAVW 234 (284)
T ss_dssp ------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--------S---CHHHH
T ss_pred ------------------ccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--------C---CHHHH
Confidence 122357999999999998866 5689999999996322111 0 01122
Q ss_pred HHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 282 VASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
...... .+. ..-+...+|+|++++.++..... --.|..+.+.++
T Consensus 235 ~~~~~~-~pl-------~~R~~~peeiA~~v~fL~S~~s~-~itG~~i~VDGG 278 (284)
T d1e7wa_ 235 EGHRSK-VPL-------YQRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 278 (284)
T ss_dssp HHHHTT-CTT-------TTSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHhc-CCC-------CCCCCCHHHHHHHHHHHhCchhc-CccCCeEEECcC
Confidence 222221 110 11245688999999998863322 223788989887
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.27 E-value=3.8e-10 Score=103.26 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=130.6
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
++|||||++.||.++++.|+++| .+|....|+.++. .+++.+++ ......+..+...|
T Consensus 3 vAlVTGas~GIG~aia~~la~~G---~~Vvi~~r~~~~~--~~~~~~~~-----------------~~~~~~~~~~~~~~ 60 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEGA--AQRLVAEL-----------------NAARAGSAVLCKGD 60 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--HHHHHHHH-----------------HHHSTTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchHH--HHHHHHHH-----------------HhhcCCceEEEecc
Confidence 68999999999999999999999 5668888876532 22222211 01123466666666
Q ss_pred CCCCCCCCCchhhH-------HHHhcCccEEEEcccccCc------------------cccHHHHHHHhHHHHHHHHHHH
Q 015874 94 ISSEDLGLKDSNLK-------EELWNELDIMVNSAAITKF------------------DERYDVAFGINTLGVIHLVNFA 148 (399)
Q Consensus 94 l~~~~~~~~~~~~~-------~~~~~~~D~Vih~Aa~~~~------------------~~~~~~~~~~n~~~~~~ll~~a 148 (399)
+.+... ..+.. .+.+.++|++||+||.... ..........|+.+........
T Consensus 61 ~~~~~~---~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (266)
T d1mxha_ 61 LSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAF 137 (266)
T ss_dssp CSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccchh---HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhh
Confidence 654321 22222 2234579999999996531 1123334455655555555554
Q ss_pred Hhcc--------CCceEEEEecceeecCcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhcccc
Q 015874 149 KKCV--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (399)
Q Consensus 149 ~~~~--------~~~~~v~~SS~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (399)
.... ....++.+|+......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 165 (266)
T d1mxha_ 138 ARRQGEGGAWRSRNLSVVNLCDAMTDLP---------------------------------------------------- 165 (266)
T ss_dssp HHTC-------CCCEEEEEECCGGGGSC----------------------------------------------------
T ss_pred ccccccccccccccccchhhhhcccccc----------------------------------------------------
Confidence 4421 1123444444432221
Q ss_pred ccccCCCCchhhHhHHHHHHHHHHh-----hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCC
Q 015874 221 RAKLHGWPNTYVFTKTMGEMLMQQS-----KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGE 295 (399)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~~-----~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
.+....|+.||...+.+.+.. ..|+++..+.||.+..+...+ + ........ ..+ +
T Consensus 166 ----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----~------~~~~~~~~-~~p-l--- 225 (266)
T d1mxha_ 166 ----LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----Q------ETQEEYRR-KVP-L--- 225 (266)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----H------HHHHHHHT-TCT-T---
T ss_pred ----CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----H------HHHHHHHh-cCC-C---
Confidence 123467999999999998766 568999999999986543311 0 11222222 111 1
Q ss_pred CccccCeeeHHHHHHHHHHHHHhccCCCCCCcEEEecCC
Q 015874 296 TKVIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (399)
Q Consensus 296 ~~~~~~~i~v~Dva~~i~~~~~~~~~~~~~~~~yni~~~ 334 (399)
.+-+...+|+|++++.++..... --.|.++.+.++
T Consensus 226 ---~r~~~~peeva~~v~fL~s~~s~-~itG~~i~vDGG 260 (266)
T d1mxha_ 226 ---GQSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 260 (266)
T ss_dssp ---TSCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ---CCCCCCHHHHHHHHHHHhCchhC-CccCCeEEECcc
Confidence 12235688999999999964322 122788999887
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.12 E-value=3.2e-09 Score=96.51 Aligned_cols=238 Identities=11% Similarity=0.054 Sum_probs=125.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
+|.||||||++.||.++++.|+++| .+|.+..|+..+. .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~G---a~V~~~~~~~~~~--------------------------------------~ 39 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEV--------------------------------------I 39 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSE--------------------------------------E
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECChHHH--------------------------------------H
Confidence 4789999999999999999999999 5567787765322 2
Q ss_pred ccCCCCCCCCC-chhhHHHHhcCccEEEEcccccCccccHHHHHHHhHHHHHHHHHHHHhc---cCCceEEEEecceeec
Q 015874 92 GDISSEDLGLK-DSNLKEELWNELDIMVNSAAITKFDERYDVAFGINTLGVIHLVNFAKKC---VKLKVFVHVSTAYVAG 167 (399)
Q Consensus 92 gDl~~~~~~~~-~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~n~~~~~~ll~~a~~~---~~~~~~v~~SS~~v~~ 167 (399)
.|+.+...... ..+...+....+|+++|+|+.....+.+......|..+...+.+..... ........+++.....
T Consensus 40 ~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (257)
T d1fjha_ 40 ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAH 119 (257)
T ss_dssp CCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGS
T ss_pred HHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccc
Confidence 23332110000 0001101123589999999987766777777888888887777655432 1334455555442221
Q ss_pred CcCCccccccCCCCCCCChhHHHHHHHHHHHhhhhcCCChhHHHHHHhhccccccccCCCCchhhHhHHHHHHHHHHh--
Q 015874 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKLHGWPNTYVFTKTMGEMLMQQS-- 245 (399)
Q Consensus 168 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~-- 245 (399)
.... .. +... ..++..--.+.+.....+.. .....|+.+|...+.+.+..
T Consensus 120 ~~~~---~~------~~~~--------------~~~~g~~~~i~s~~~~~~~~-----~~~~~Y~asKaal~~ltr~lA~ 171 (257)
T d1fjha_ 120 LAFD---KN------PLAL--------------ALEAGEEAKARAIVEHAGEQ-----GGNLAYAGSKNALTVAVRKRAA 171 (257)
T ss_dssp SCGG---GC------TTHH--------------HHHHTCHHHHHHHHHTCCTT-----HHHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhh---hh------hhhh--------------hccCCcEEEEeeehhccCCC-----cchHHHHHHhhhhhcccccccc
Confidence 1100 00 0000 00000001111111111110 11236999999999999866
Q ss_pred ---hCCCcEEEEecCceecCCCCCCCCcccCcchHHHHHHHhhcCccccccCCCccccCeeeHHHHHHHHHHHHHhccCC
Q 015874 246 ---KENLSLVIIRPTVVSGTYKEPFPGWVEDLKTINTLFVASAQGNLRCLVGETKVIMDVIPVDMVVNAMIVAMVAHAKQ 322 (399)
Q Consensus 246 ---~~~~~~~i~Rp~~V~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~i~~~~~~~~~~ 322 (399)
..|+++..+.||.|-.+.... .... ........... ....-+...+|+|+++..++.....
T Consensus 172 el~~~gIrVN~I~PG~i~T~~~~~---~~~~----~~~~~~~~~~~--------~PlgR~g~p~eva~~v~fL~S~~s~- 235 (257)
T d1fjha_ 172 AWGEAGVRLNTIAPGATETPLLQA---GLQD----PRYGESIAKFV--------PPMGRRAEPSEMASVIAFLMSPAAS- 235 (257)
T ss_dssp HHHHTTCEEEEEEECC----------------------------CC--------CSTTSCCCTHHHHHHHHHHTSGGGT-
T ss_pred ccccccccccccccCCcCChhHHh---hcCC----HHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchhC-
Confidence 678999999999997654311 0000 00011111100 0112245678999999998864322
Q ss_pred CCCCcEEEecCC
Q 015874 323 PSDANIYHVGSS 334 (399)
Q Consensus 323 ~~~~~~yni~~~ 334 (399)
--.|..+.+.++
T Consensus 236 ~itG~~i~vDGG 247 (257)
T d1fjha_ 236 YVHGAQIVIDGG 247 (257)
T ss_dssp TCCSCEEEESTT
T ss_pred CccCceEEeCCC
Confidence 223788888876
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.87 E-value=1.2e-09 Score=95.70 Aligned_cols=84 Identities=19% Similarity=0.169 Sum_probs=63.8
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKIT 88 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 88 (399)
.++||+|+||||+|.||+.+++.|+++| .+|.+..|+.++.... .+.+ .+ ..++.
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G---~~V~~~~r~~~~~~~~---~~~~---------~~----------~~~~~ 74 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDKAQAA---ADSV---------NK----------RFKVN 74 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHH---HHHH---------HH----------HHTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc---cchhhcccchHHHHHH---HHHH---------Hh----------ccchh
Confidence 5799999999999999999999999999 5678899987554222 1111 00 13455
Q ss_pred EEeccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 89 FVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 89 ~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
+..+|++ +.+...+.++++|+|||+||..
T Consensus 75 ~~~~d~~-------~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 75 VTAAETA-------DDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CEEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred hhhhhcc-------cHHHHHHHhcCcCeeeecCccc
Confidence 6788998 5566668889999999999864
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.67 E-value=0.00012 Score=60.27 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=71.1
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|.|+||+|.+|++++..|..++. +.++......+.+.++. ++ .+. .-......-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~-~~elvLiDi~~~~~~a~-----Dl-----------~~~--------~~~~~~~~~ 56 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAHTPGVAA-----DL-----------SHI--------ETRATVKGY 56 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSSHHHHHH-----HH-----------TTS--------SSSCEEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCc-cceEEEEeccccchhhH-----HH-----------hhh--------hhhcCCCeE
Confidence 699999999999999998877653 35566665433221111 11 000 001111111
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+. ..+.. +.++++|+||-+||...-+ +.....++.|..-...+.+.+.++ ..+-++.+-
T Consensus 57 ~~-------~~~~~-~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivv 116 (144)
T d1mlda1 57 LG-------PEQLP-DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (144)
T ss_dssp ES-------GGGHH-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred Ec-------CCChH-HHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence 11 12222 5578999999999975433 566777999999999999999997 444444443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.61 E-value=0.0005 Score=56.34 Aligned_cols=118 Identities=10% Similarity=0.057 Sum_probs=72.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+||+|.+|+.++..|+..+. +.++..+.+.++.. .++.+..++ .+- ......+++....
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~-~~~g~a~Dl-----~~~---------~~~~~~~~~~~~~ 64 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSIN-KLEGLREDI-----YDA---------LAGTRSDANIYVE 64 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHH-HHHHHHHHH-----HHH---------HTTSCCCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCc-ccccccccchhhhH-hhhcccccc-----hhc---------ccccccCCccccC
Confidence 6899999999999999998887663 24667776664322 122221111 000 0001122222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v 158 (399)
--. +. ...+++|+||-+||...- .+....+++.|..-.+.+.+.+.++ ..+.++
T Consensus 65 ~~~-------d~----~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~ii 119 (145)
T d1hyea1 65 SDE-------NL----RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIF 119 (145)
T ss_dssp ETT-------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred Ccc-------hH----HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEE
Confidence 101 11 345689999999997654 3567788999999999999999886 344443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=0.00019 Score=58.98 Aligned_cols=117 Identities=16% Similarity=0.144 Sum_probs=70.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|++|.+|++++..|......+.++..+...+ .. +...-++ . + . ........+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~---~g~a~Dl-----~--------h-~--~~~~~~~~~~~ 60 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT---PGVAVDL-----S--------H-I--PTAVKIKGFSG 60 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-TH---HHHHHHH-----H--------T-S--CSSCEEEEECS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cc---hhHHHHH-----H--------C-C--ccccCCcEEEc
Confidence 6899999999999999988765433335666665432 21 1111111 0 0 0 00111111111
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+.. ..+.+.|+||-+||...- .+...++++.|..-.+.+.+.+.++.+...++.+|
T Consensus 61 -----------~~~~-~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 61 -----------EDAT-PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp -----------SCCH-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred -----------CCCc-cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 1112 346799999999997643 35667778999999999999998863333344444
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.35 E-value=0.0006 Score=56.34 Aligned_cols=113 Identities=8% Similarity=-0.012 Sum_probs=66.9
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCC--cCeE-EEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPN--VKKL-YLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKI 87 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~--V~~v-~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 87 (399)
+.++|.|+||+|++|++++..|...+.- ...+ ..+..........+....++ ........
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 65 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMEL-----------------EDCAFPLL 65 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH-----------------HTTTCTTE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhh-----------------hccccccc
Confidence 3579999999999999999998775421 0111 11211211111222211111 00111222
Q ss_pred EEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 88 TFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 88 ~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..+...-. ....++++|+||-+||...- .+.....+..|+.-.+.+.+.+.++
T Consensus 66 ~~~~~~~~-----------~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 66 AGLEATDD-----------PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEEEEESC-----------HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCc-----------hhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222211 12567899999999998654 3567778999999999999999885
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.32 E-value=0.00059 Score=54.59 Aligned_cols=73 Identities=16% Similarity=0.265 Sum_probs=51.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|+|+|+ |.+|+++++.|.+.| +.|.++.++++. .+++.+. .++.++.|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g---~~v~vid~d~~~---~~~~~~~-----------------------~~~~vi~G 50 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDKDI---CKKASAE-----------------------IDALVING 50 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHH-----------------------CSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC---CCcceecCChhh---hhhhhhh-----------------------hhhhhccC
Confidence 78999997 999999999999999 455777555432 2222211 25678899
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
|.+ +.+.+..+ .+++|.++-+..
T Consensus 51 d~~-------~~~~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 51 DCT-------KIKTLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp CTT-------SHHHHHHTTTTTCSEEEECCS
T ss_pred ccc-------chhhhhhcChhhhhhhcccCC
Confidence 999 55555444 357898887643
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.21 E-value=0.0012 Score=54.16 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=73.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
..+++|.|+|| |.+|++++..|+..+. +.++..+.+.+++.. ....++ .+ ...+....+..
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~~~---g~a~Dl-----~~---------~~~~~~~~~~~ 64 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKAI---GDAMDF-----NH---------GKVFAPKPVDI 64 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH---HHHHHH-----HH---------HTTSSSSCCEE
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecccccc---chhccH-----hh---------CccccCCCeEE
Confidence 45678999997 9999999999999874 346676665543321 111111 00 01111233333
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
..+|. +.+.++|+||.+|+...- .+...+.+..|..-...+.+.+.++.+-..++.+
T Consensus 65 ~~~d~--------------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv 122 (148)
T d1ldna1 65 WHGDY--------------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (148)
T ss_dssp EECCG--------------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred EECCH--------------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence 33332 235689999999997643 3455667888999999999998886333334433
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.20 E-value=0.0012 Score=53.98 Aligned_cols=116 Identities=12% Similarity=0.101 Sum_probs=68.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
++|+|.|.|+ |++|+.++..|+.+|- +.++.++.+.+++.. ....++ .+. ... ......+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~~~~---g~a~Dl-----~~a---------~~~-~~~~~~~ 63 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRTK---GDALDL-----EDA---------QAF-TAPKKIY 63 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH---HHHHHH-----HGG---------GGG-SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccchhH---HHHHHH-----hcc---------ccc-cCCceEe
Confidence 4578999995 9999999999999873 246777766543221 111111 000 001 1223334
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
.+|.. ...++|+||.+|+.... .+........|+.-...+.+.+.++ ..+.++.+-
T Consensus 64 ~~d~~--------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivv 120 (146)
T d1ez4a1 64 SGEYS--------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVA 120 (146)
T ss_dssp ECCGG--------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred eccHH--------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEe
Confidence 44422 24689999999987543 2455666888999999999999886 455454443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00059 Score=55.98 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=30.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~~~ 50 (399)
+|+|.|.||||++|+.+++.|+++ .+.+.+++++.++..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 368999999999999999988875 345567777766554
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.13 E-value=0.00047 Score=56.44 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=30.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.|+|.|.||||++|..|++.|.+++|.+.++..+..+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 47899999999999999998876666656777665443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.08 E-value=0.0072 Score=50.74 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=67.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhC---CC-cCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQ---PN-VKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g---~~-V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+..+|.||||+|.||.+++..|+... .+ ...++.+....... .++.+.-++ .+.....
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~-~l~g~~mdl-----------------~d~a~~~ 84 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQ-ALEGVAMEL-----------------EDSLYPL 84 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHH-----------------HTTTCTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccc-hhcchhhhh-----------------ccccccc
Confidence 34589999999999999999887632 12 11233332222111 222211111 0001111
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..-+.. + .+ ..+.+.++|+||-.||...- .+....+++.|..-.+.+.+++.++
T Consensus 85 ~~~~~~--~--------~~-~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 85 LREVSI--G--------ID-PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp EEEEEE--E--------SC-HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccc--c--------cc-chhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 111111 1 11 12567899999999998654 4677888999999999999999985
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.00 E-value=0.0035 Score=50.72 Aligned_cols=107 Identities=15% Similarity=0.053 Sum_probs=67.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|| |.+|++++..|+..+. +.++....+.++...... .++.... .....+..+...
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~~~~~~~---~d~~~~~--------------~~~~~~~~i~~~ 61 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQGKA---LDMYESG--------------PVGLFDTKVTGS 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHHHH---HHHHTTH--------------HHHTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEeccccccchhhh---hhhhccc--------------chhcccceEEec
Confidence 68999996 9999999999988763 356777766665432211 0110000 000122222211
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
+ +. +.+.++|+|+-+||...- .+.....++.|..-...+.+.+.++
T Consensus 62 ~---------~~----~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~ 108 (142)
T d1guza1 62 N---------DY----ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (142)
T ss_dssp S---------CG----GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---------CH----HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc
Confidence 1 11 235789999999997543 3556777889999999999998886
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.99 E-value=0.0062 Score=49.34 Aligned_cols=112 Identities=12% Similarity=0.006 Sum_probs=69.9
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
+|.|+||+|.+|++++..|+.++.- .++..+....... ..+...-++ .+ ..+ ...+.....+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~-~el~L~Di~~~~~-~~~g~a~Dl-----~~----~~~------~~~~~~i~~~~ 64 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKED-DTVGQAADT-----NH----GIA------YDSNTRVRQGG 64 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGHH-HHHHHHHHH-----HH----HHT------TTCCCEEEECC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCC-CEEEEEecCCccc-ccceeecch-----hh----ccc------ccCCceEeeCC
Confidence 7999999999999999999987642 4566654432211 111111111 00 000 11233333333
Q ss_pred CCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCceE
Q 015874 94 ISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLKVF 157 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~ 157 (399)
.. ...++|+||-+||...-+ +....+++.|..-.+.+.+.+.++ ..+.+
T Consensus 65 ~~--------------~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i 114 (142)
T d1o6za1 65 YE--------------DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYI 114 (142)
T ss_dssp GG--------------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCE
T ss_pred HH--------------HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCce
Confidence 21 246899999999976543 567788999999999999999987 34433
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.93 E-value=0.00021 Score=59.97 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=32.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
|||.|+||+|.+|++|++.|+++| ++|.+..|++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G---~~V~l~~R~~e~~ 37 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRREEKA 37 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCHHHH
Confidence 689999999999999999999999 5568888876543
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.92 E-value=0.00081 Score=55.74 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=32.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.|+|+|.|| |++|+++++.|.++| ++|++..|+.++.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g---~~V~v~dr~~~~a 38 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSG---IKVTVACRTLESA 38 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTT---CEEEEEESCHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECChHHH
Confidence 589999986 999999999999999 5678998887644
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.86 E-value=0.0021 Score=52.61 Aligned_cols=36 Identities=14% Similarity=0.323 Sum_probs=28.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHh-CCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRV-QPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~-g~~V~~v~~~~R~ 48 (399)
|+|.|.|||||+|+.|++.|++. .+.+..+..+..+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~ 37 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence 68999999999999999988864 3555666666544
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.82 E-value=0.0042 Score=51.43 Aligned_cols=121 Identities=18% Similarity=0.091 Sum_probs=74.4
Q ss_pred HhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 015874 7 VEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEK 86 (399)
Q Consensus 7 ~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (399)
+...+.++|.|.|+ |.+|+.++..|+.+|.- .++....+.++... ....++ .+ ........
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~-~ElvLiD~~~~~a~---g~alDl-----~h---------~~~~~~~~ 75 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKSLA-DELALVDVLEDKLK---GEMMDL-----QH---------GSLFLQTP 75 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSCHHHHH---HHHHHH-----HH---------TGGGCCCS
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCC-cEEEEEEeccchhH---HHHHHH-----hc---------cccccCCC
Confidence 44556679999996 99999999999998742 45666655433221 111111 00 00111122
Q ss_pred eEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhccCCc-eEEEEe
Q 015874 87 ITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKCVKLK-VFVHVS 161 (399)
Q Consensus 87 i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~~~~~-~~v~~S 161 (399)
.....+|. +...++|+||..||...-+ +.....++.|..-.+.+...+.+. ..+ .++.+|
T Consensus 76 ~~~~~~d~--------------~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvt 137 (160)
T d1i0za1 76 KIVADKDY--------------SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVS 137 (160)
T ss_dssp EEEECSSG--------------GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred eEEeccch--------------hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 22222221 2357899999999986543 556677889999999999999886 444 344444
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.79 E-value=0.0028 Score=51.42 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=64.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
++|.|+|+ |.+|+.++..|+..+. +.++.++.+.++...... .+|. + .... ........+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~g~a---~Dl~-----------~---~~~~-~~~~~~~~~ 61 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEA---MDIN-----------H---GLPF-MGQMSLYAG 61 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHH---HHHT-----------T---SCCC-TTCEEEC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeccCCccceee---eeec-----------c---Cccc-CCCeeEeeC
Confidence 46888897 9999999999988763 457888877776543211 0110 0 0011 122222222
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
| . ....++|+|+-+||...- .+.....++.|+.-...+.+.+.++
T Consensus 62 ~----------~----~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~ 107 (142)
T d1y6ja1 62 D----------Y----SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 107 (142)
T ss_dssp C----------G----GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c----------H----HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc
Confidence 2 1 235789999999997643 3566778899999999999999886
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.74 E-value=0.0033 Score=51.73 Aligned_cols=118 Identities=13% Similarity=0.111 Sum_probs=70.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+.++|.|.|+ |.+|+.++..|...+. .++.++...++..... ..++ .+ .... ........
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~~~~g~---a~Dl-----~~-~~~~--------~~~~~~~~ 65 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEGK---ALDL-----SH-VTSV--------VDTNVSVR 65 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHH---HHHH-----HH-HHHH--------TTCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEeccccchhH---HHHH-----hh-hccc--------cCCeeEEe
Confidence 3468999997 9999999988887773 4666665555433211 1111 00 0000 00111111
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc------ccHHHHHHHhHHHHHHHHHHHHhccCCceEEEEe
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHVS 161 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~------~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~S 161 (399)
+ ....+....+.|+|+-+|+...-+ ......+..|..-...+++.+.++ ..+-++.+-
T Consensus 66 -~-----------~~~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviiv 129 (154)
T d1pzga1 66 -A-----------EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVV 129 (154)
T ss_dssp -E-----------ECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred -c-----------cCchhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEe
Confidence 1 111224568999999999875432 245566888999999999999887 444444443
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.70 E-value=0.0043 Score=52.26 Aligned_cols=85 Identities=21% Similarity=0.273 Sum_probs=57.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
+++++|+|.|+ |..|++++..|.+.|. ..+++..|+.+....+..+.+.+ +. ......
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~~~~~~~l~~~~-------------~~------~~~~~~ 73 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEFFDKALAFAQRV-------------NE------NTDCVV 73 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHH-------------HH------HSSCEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHHHHHHHHHHHHH-------------Hh------hcCcce
Confidence 67899999996 7889999999999874 67889999877654433332211 11 022334
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAI 123 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~ 123 (399)
...|+. +.+........+|+|||+...
T Consensus 74 ~~~~~~-------~~~~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 74 TVTDLA-------DQQAFAEALASADILTNGTKV 100 (182)
T ss_dssp EEEETT-------CHHHHHHHHHTCSEEEECSST
T ss_pred Eeeecc-------cccchhhhhcccceeccccCC
Confidence 455666 333333556789999999764
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.65 E-value=0.0092 Score=48.81 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=34.3
Q ss_pred HHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 109 ELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 109 ~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
..+.++|+||-+||...-+ +.....++.|..-.+.+.+.+.++
T Consensus 75 ~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 75 IAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp HHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 5578999999999986543 455667889999999999888774
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.013 Score=47.24 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=70.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|.|+ |.+|++++..|+.++. +.++..+.+.+++.. ....++ .+ .. . ...+.....+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~---g~~~Dl-----~~------~~---~-~~~~~~~~~~ 60 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRAE---GDALDL-----IH------GT---P-FTRRANIYAG 60 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH---HHHHHH-----HH------HG---G-GSCCCEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeccccccc---chhccc-----cc------cc---c-ccccccccCC
Confidence 68999996 9999999999988774 356666655443221 111111 00 00 0 0123333333
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
|. +.++++|+||-+|+.... .+.....+..|..-...+.+.+.++ ..+-++.+
T Consensus 61 ~~--------------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiviv 114 (140)
T d1a5za1 61 DY--------------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (140)
T ss_dssp CG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred cH--------------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEE
Confidence 31 225689999999998654 3556777888999999999999886 44444443
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.59 E-value=0.013 Score=47.41 Aligned_cols=112 Identities=15% Similarity=0.110 Sum_probs=69.3
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
.+|.|+|+ |.+|++++..|+.++. +.++....+.+.+.. ....++ + +. ..+. ........
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~~~---g~a~Dl------~-----~a---~~~~-~~~~i~~~ 61 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVE---AEVLDM------Q-----HG---SSFY-PTVSIDGS 61 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHH---HHHHHH------H-----HT---GGGS-TTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccccch---hHHHHH------H-----hc---cccC-CCceeecC
Confidence 46899996 9999999999998774 345666655443221 111111 0 00 0111 12222222
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFV 158 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v 158 (399)
+ + . +...++|+||-+||...- .+...+.++.|..-.+.+.+.+.++ ..+.++
T Consensus 62 ~---------~---~-~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ 114 (143)
T d1llda1 62 D---------D---P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIY 114 (143)
T ss_dssp S---------C---G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred C---------C---H-HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEE
Confidence 1 1 1 235689999999998654 3666778999999999999998886 444343
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.57 E-value=0.0021 Score=56.27 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=52.9
Q ss_pred hhcCCcEEEEecC----------------cchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHH
Q 015874 8 EFLENKTILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVL 71 (399)
Q Consensus 8 ~~~~~~~IlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~ 71 (399)
+.++||+||||+| ||-.|.+|++.+.++|++| +++.-.....
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V---~li~g~~~~~------------------- 59 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV---TLVSGPVSLP------------------- 59 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE---EEEECSCCCC-------------------
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCch---hhhhcccccC-------------------
Confidence 4688999999987 6889999999999999554 5554433211
Q ss_pred HhhhcccccccccCceEEEeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc
Q 015874 72 KEKWGTRLNSFISEKITFVPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF 126 (399)
Q Consensus 72 ~~~~~~~~~~~~~~~i~~~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~ 126 (399)
.+..+..+...-.+. ..+.....+.+.|++|++||...|
T Consensus 60 -----------~p~~~~~~~~~t~~~-----m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 60 -----------TPPFVKRVDVMTALE-----MEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp -----------CCTTEEEEECCSHHH-----HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred -----------cccccccceehhhHH-----HHHHHHhhhccceeEeeeechhhh
Confidence 123444443321100 223333455689999999998766
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.55 E-value=0.0081 Score=48.85 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=66.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+|.|+|+ |.+|+.++..|+.+|. +.++....+.+++... ...++ .+. ............+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~~~g---~~~Dl-----~~a---------~~~~~~~~~~~~~ 62 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANEAKVKA---DQIDF-----QDA---------MANLEAHGNIVIN 62 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHH---HHHHH-----HHH---------GGGSSSCCEEEES
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEecccchhhh---HHHhh-----hcc---------ccccCCccceecc
Confidence 68999995 9999999999998873 2456665544332211 11111 100 0011223333333
Q ss_pred cCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-----ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 93 DISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-----ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-----~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
|. +..+++|+||-+||..... ......++.|..-...+.+.+.++ ..+-++.
T Consensus 63 d~--------------~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivi 119 (146)
T d1hyha1 63 DW--------------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLV 119 (146)
T ss_dssp CG--------------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEE
T ss_pred CH--------------HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEE
Confidence 32 2247899999999975421 223345778999999999998886 3443433
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.45 E-value=0.015 Score=46.84 Aligned_cols=114 Identities=15% Similarity=0.015 Sum_probs=69.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe-
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP- 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~- 91 (399)
|+|.|+|+ |.+|++++..|+.++- +.++.++.+.++.... ..-++ +.... ..........
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~~~g---~alDl------~~~~~--------~~~~~~~i~~~ 61 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVG---EAMDL------AHAAA--------GIDKYPKIVGG 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHH---HHHHH------HHHHH--------TTTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCc-CceEEEEecccchhhH---HHHHH------hhhcc--------ccCCCCccccC
Confidence 68999996 9999999999988773 3566766554433211 10011 00000 0011112221
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
.|. +...+.|+||-.|+...- .+.....+..|..-...+.+.+.++ ..+.++.+
T Consensus 62 ~d~--------------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aiviv 116 (142)
T d1ojua1 62 ADY--------------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred CCH--------------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEE
Confidence 121 345789999999997543 3456777888999999999999886 33444433
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.0043 Score=50.68 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=31.5
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
|+|.|.|+ |.+|+.++..|.+.| +.|.++.|+....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G---~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQG---HEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCC---CceEEEEcCHHHh
Confidence 78999997 999999999999999 5668998887654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.23 E-value=0.0038 Score=52.43 Aligned_cols=41 Identities=20% Similarity=0.071 Sum_probs=34.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.-+|.+|||+||+|.+|...+......| .+|++.+|+.++
T Consensus 26 ~v~~G~~VlV~ga~ggvG~~aiqlak~~G---a~vi~~~~~~~~ 66 (182)
T d1v3va2 26 GVKGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSDEK 66 (182)
T ss_dssp CCCSSCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHH
T ss_pred CCCCCCEEEEEeCCCchhHHHHHHHHccC---CEEEEeCCCHHH
Confidence 34578999999999999999998888888 667888887654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.23 E-value=0.018 Score=46.95 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=68.7
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEe
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVP 91 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (399)
.++|.|.|+ |.+|++++..|...+ +.++.++.+..+.... ...++..-.. ....+.....
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~g---~a~Dl~~~~~--------------~~~~~~~v~~ 62 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPHG---KALDTSHTNV--------------MAYSNCKVSG 62 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHHH---HHHHHHTHHH--------------HHTCCCCEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCccee---eecchhhhcc--------------ccCCCcEEEe
Confidence 468999995 999999998776654 4567776665544321 1111110000 0112222222
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc------ccHHHHHHHhHHHHHHHHHHHHhccCCceEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD------ERYDVAFGINTLGVIHLVNFAKKCVKLKVFVH 159 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~------~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~ 159 (399)
.+ +. +...+.|+|+-+|+....+ .....++..|..-...+.+.+++. ..+-++.
T Consensus 63 ~~---------~~----~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aivi 122 (150)
T d1t2da1 63 SN---------TY----DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFII 122 (150)
T ss_dssp EC---------CG----GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred cc---------cc----cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence 21 11 3356899999999975432 235666889999999999999886 4444443
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=96.20 E-value=0.013 Score=48.17 Aligned_cols=41 Identities=22% Similarity=0.313 Sum_probs=33.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.+++++|+|.|+ |-+|+.+++.|...|. ..+++..|+.++.
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~~ka 61 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTYERA 61 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSHHHH
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcHHHH
Confidence 478899999997 9999999999999884 3578888875543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.0026 Score=46.03 Aligned_cols=40 Identities=13% Similarity=0.206 Sum_probs=33.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.++++|+|+||+|.+|+..+..+...| .+|.+.++++++.
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G---~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTH 69 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcC---CeEEEEECCHHHH
Confidence 467899999999999999998888888 4568888887654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.13 E-value=0.006 Score=50.75 Aligned_cols=42 Identities=7% Similarity=0.082 Sum_probs=34.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.-+|.+|+|+||+|-+|...+..+...| .+|++.++++++.
T Consensus 24 ~~~~g~~VlI~ga~G~vG~~aiqlak~~G---~~vi~~~~~~~~~ 65 (171)
T d1iz0a2 24 QARPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPEKL 65 (171)
T ss_dssp TCCTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGGGS
T ss_pred CCCCCCEEEEEeccccchhhhhhhhcccc---ccccccccccccc
Confidence 34578899999999999999998888888 5678888876554
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.07 E-value=0.0089 Score=47.21 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=47.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|+++|.|+ |-+|+++++.|.+.|++| .++..+++. .++.. ......+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~v---vvid~d~~~---~~~~~------------------------~~~~~~~~g 49 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINEEK---VNAYA------------------------SYATHAVIA 49 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCHHH---HHHTT------------------------TTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeE---EEecCcHHH---HHHHH------------------------HhCCcceee
Confidence 56888875 999999999999999665 555444322 12211 234567789
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
|.++ .+.++.+ ..++|.||-..+
T Consensus 50 d~~~-------~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 50 NATE-------ENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CTTC-------TTHHHHHTGGGCSEEEECCC
T ss_pred eccc-------chhhhccCCccccEEEEEcC
Confidence 9994 4455444 567898876554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.03 E-value=0.022 Score=45.87 Aligned_cols=113 Identities=10% Similarity=0.079 Sum_probs=64.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE-e
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV-P 91 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~ 91 (399)
++|.|+|+ |.+|++++..|...+- ..+.++...++..... ..++..-. .......... .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~~~~~~---~~Dl~~~~--------------~~~~~~~~i~~~ 61 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQGK---ALDLYEAS--------------PIEGFDVRVTGT 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSSHHHHH---HHHHHTTH--------------HHHTCCCCEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeeccccchhH---HHHhhccc--------------cccCCCCEEEec
Confidence 57999996 9999999999888763 4666665555433211 11110000 0001111121 1
Q ss_pred ccCCCCCCCCCchhhHHHHhcCccEEEEcccccCc-cccHHHHHHHhHHHHHHHHHHHHhccCCceEEEE
Q 015874 92 GDISSEDLGLKDSNLKEELWNELDIMVNSAAITKF-DERYDVAFGINTLGVIHLVNFAKKCVKLKVFVHV 160 (399)
Q Consensus 92 gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~n~~~~~~ll~~a~~~~~~~~~v~~ 160 (399)
.|. ....+.|+||-+||...- .+.....++.|..-...+.+.+.+. ..+-++.+
T Consensus 62 ~d~--------------~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv 116 (142)
T d1uxja1 62 NNY--------------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIM 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred CcH--------------HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence 221 234689999999997643 3455666888999999999999886 44444443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=95.82 E-value=0.017 Score=46.55 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=30.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
...++|.|.||.|.+|+.+++.|.+.|++| .+..|+.
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V---~~~d~~~ 43 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRASGYPI---SILDRED 43 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCE---EEECTTC
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCc---Eeccccc
Confidence 445799999999999999999999999654 6665543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.79 E-value=0.011 Score=48.69 Aligned_cols=109 Identities=17% Similarity=0.030 Sum_probs=65.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITF 89 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (399)
++..+|.|+|+ |.+|++++..|+..|. +.++..+.+.++.. +....+| -+ .....+.....
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~~a---~g~alDl-----~~---------~~~~~~~~~~~ 77 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTDKL---RGEALDL-----QH---------GSLFLSTPKIV 77 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHHHH---HHHHHHH-----HH---------TTTTCSCCEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCchhh---hccHHHH-----hC---------cchhcCCCeEE
Confidence 44567999996 9999999999988774 24666665443322 1111111 00 00011112222
Q ss_pred EeccCCCCCCCCCchhhHHHHhcCccEEEEcccccCcc-ccHHHHHHHhHHHHHHHHHHHHhc
Q 015874 90 VPGDISSEDLGLKDSNLKEELWNELDIMVNSAAITKFD-ERYDVAFGINTLGVIHLVNFAKKC 151 (399)
Q Consensus 90 ~~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~n~~~~~~ll~~a~~~ 151 (399)
...|. ....++|+||-+||....+ +.....++.|..-...+...+.+.
T Consensus 78 ~~~d~--------------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~ 126 (159)
T d2ldxa1 78 FGKDY--------------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN 126 (159)
T ss_dssp EESSG--------------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH
T ss_pred eccch--------------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 22221 2346899999999976432 444556788998899998888876
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.75 E-value=0.0049 Score=51.80 Aligned_cols=43 Identities=19% Similarity=0.145 Sum_probs=34.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA 55 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~ 55 (399)
.+|.+|||+||+|.+|+..+.-....| .+|++.++++++....
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~G---a~Viat~~s~~k~~~~ 72 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAEHDYL 72 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTCHHHH
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcC---CceEEecCchHHHHHH
Confidence 456889999999999999998887889 5568888888765433
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.72 E-value=0.0033 Score=52.45 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=34.6
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHH
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAA 55 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~ 55 (399)
++.+|||+||+|.+|...+.-....| .+|++.+|++++.+.+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~G---a~Viat~~s~~k~~~~ 64 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADYL 64 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcC---CceEEEecCHHHHHHH
Confidence 45689999999999999998888889 5669999988775444
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.0099 Score=49.27 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=32.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-+|.+|||+||+|.+|...+..+...| .+|++.+++++
T Consensus 26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~G---~~vi~~~~~~~ 64 (174)
T d1yb5a2 26 VKAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTEE 64 (174)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCCEEEEEeccccccccccccccccC---ccccccccccc
Confidence 3478899999999999999998888888 56788887653
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=95.57 E-value=0.016 Score=47.39 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=27.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
|+|.|.| .|.+|+.+++.|.+.| ++|++..|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g---~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRG---HYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCC---CEEEEEECCc
Confidence 6899997 5999999999999999 5567777764
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=95.48 E-value=0.023 Score=46.89 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=29.8
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.|+|.|.|| |-+|..++..|.++| +.|.+..|+++
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G---~~V~~~~r~~~ 35 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDAQ 35 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCC---CEEEEEECCHH
Confidence 378999996 999999999999999 55688888653
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.42 E-value=0.013 Score=48.62 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=32.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.-+|.+|||+||+|.+|...+..+...| .++.+.+++++
T Consensus 23 ~~~g~~VlI~ga~g~vG~~~iqla~~~g---~~vi~~~~~~~ 61 (183)
T d1pqwa_ 23 LSPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDA 61 (183)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHH
T ss_pred CCCCCEEEEECCCCCcccccchhhcccc---ccceeeecccc
Confidence 3467899999999999999999888888 56678777653
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.33 E-value=0.017 Score=47.74 Aligned_cols=41 Identities=17% Similarity=0.081 Sum_probs=34.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
..+|.+|+|+||+|.+|...+......| .+|++.++++++.
T Consensus 26 l~~g~~Vlv~ga~g~vG~~~iqlak~~G---a~Vi~~~~s~~k~ 66 (179)
T d1qora2 26 IKPDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQKA 66 (179)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHHH
T ss_pred CCCCCEEEEEccccccchHHHHHHHHhC---CeEeecccchHHH
Confidence 3467899999999999999998888889 5678888887554
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.30 E-value=0.014 Score=47.67 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=25.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
=+|.|.|||||+|..|++.|.+..+.+..+..+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 3799999999999999987755432344555554
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.91 E-value=0.024 Score=46.42 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=29.1
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+|+|+|.| .|.||..+++.|.+.|+.+ +|++..|++
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECCh
Confidence 35799997 6999999999999999764 567765554
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=94.90 E-value=0.036 Score=40.91 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=30.3
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.++||+|+|.|. |-.|..+++.|.+.|.+| ++...+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v---~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTP---RVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCC---EEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEE---EEeeCCcC
Confidence 368999999996 778999999999999655 66655443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=94.87 E-value=0.015 Score=48.71 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=27.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+++|.|.|||||+|..|++.|.+ .+++.-..+..++.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~~~s~ 37 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNR-HPHMTITALTVSAQ 37 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETT
T ss_pred CcEEEEECcccHHHHHHHHHHHh-CCCCceEeeEeecc
Confidence 47999999999999999987765 56653344455543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.60 E-value=0.0099 Score=50.10 Aligned_cols=34 Identities=18% Similarity=0.447 Sum_probs=26.3
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
+..+|.|.|||||.|..|++.|.+ .+.+ ++..+.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~-HP~~-ei~~l~ 37 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLAN-HPQF-RIKVMT 37 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTT-CSSE-EEEEEE
T ss_pred CccEEEEECcccHHHHHHHHHHHh-CCCc-eEEEEe
Confidence 456899999999999999988765 5665 444444
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.56 E-value=0.034 Score=45.64 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=33.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~ 54 (399)
+..+|.+|+|.|+ |.+|...+..+...| .+|+++.+++++.+.
T Consensus 24 ~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G---~~vi~~~~~~~k~~~ 66 (168)
T d1piwa2 24 GCGPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSRKRED 66 (168)
T ss_dssp TCSTTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSSTTHHH
T ss_pred CcCCCCEEEEECC-CCcchhHHHHhhhcc---ccccccccchhHHHH
Confidence 4457899999986 999999888777778 567888888766533
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.47 E-value=0.023 Score=48.14 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=29.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|.|.|| |.+|+.++..++..| +.|.+..++++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~~~ 39 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATG---HTVVLVDQTEDI 39 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCC---CcEEEEECChHH
Confidence 68999996 999999999999999 556787777654
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.15 E-value=0.019 Score=48.08 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=25.5
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
+++|.|.||||++|..|++.|.+ .+++ ++..+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~-HP~~-ei~~l~ 33 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKN-HPEA-KITYLS 33 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTE-EEEEEE
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-CCCc-eEEEee
Confidence 47899999999999999987654 6675 444443
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=93.97 E-value=0.025 Score=46.70 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=32.7
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.+||+|+|.|+ |..+++++..|.+.| .+|+++.|+.++.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g---~~i~I~nRt~~ka 54 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTVSRA 54 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSHHHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccc---eEEEeccchHHHH
Confidence 67899999995 778999999999988 4688888887554
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=93.86 E-value=0.08 Score=43.07 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=31.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+...|.+|+|+| +|.||...+..+...| .+|++..+++++.
T Consensus 23 ~~~~g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~~r~ 63 (170)
T d1e3ja2 23 GVQLGTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSPRRL 63 (170)
T ss_dssp TCCTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHHHH
T ss_pred CCCCCCEEEEEc-ccccchhhHhhHhhhc---ccccccchHHHHH
Confidence 345678999997 6899999998888878 5678887766543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=93.76 E-value=0.094 Score=42.69 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=32.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.-++.+|+|+|++|-+|...+..+...|. .+|++..+++++
T Consensus 24 ~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~~~ 65 (170)
T d1jvba2 24 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEA 65 (170)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHH
T ss_pred CCCCCCEEEEEeccccceeeeeeccccccc--ccccccccchhh
Confidence 345678999999999999999988888885 356777666543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=93.73 E-value=0.043 Score=45.93 Aligned_cols=41 Identities=15% Similarity=-0.004 Sum_probs=31.9
Q ss_pred hcCCcEEEE-ecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILV-SGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlV-TGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.-+|.+|+| +||+|.+|...+......| .+|.+.+|+.+..
T Consensus 26 ~~~g~~vli~~ga~g~vG~~aiqlAk~~G---a~vI~~v~~~~~~ 67 (189)
T d1gu7a2 26 LTPGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRPNL 67 (189)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCTTH
T ss_pred CCCCCEEEEEeCCCchHHHHHHHHHhhcC---CeEEEEEeccccc
Confidence 345667777 6999999999998887789 5678888877653
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=93.65 E-value=0.014 Score=48.28 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=32.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.++++|+|.|+ |..|++++..|.+.|. .+|+++.|+.++.
T Consensus 15 ~~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~~ka 54 (167)
T d1npya1 15 NKNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNVKTG 54 (167)
T ss_dssp CTTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCHHHH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccHHHH
Confidence 36789999985 8899999999999885 4578888876543
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=93.60 E-value=0.052 Score=44.84 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=31.6
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.++++|+|.| +|..|++++..|.+.+ .+|+++.|+.++.
T Consensus 16 ~~~k~vlIlG-aGGaarai~~aL~~~~---~~i~I~nR~~~~a 54 (171)
T d1p77a1 16 RPNQHVLILG-AGGATKGVLLPLLQAQ---QNIVLANRTFSKT 54 (171)
T ss_dssp CTTCEEEEEC-CSHHHHTTHHHHHHTT---CEEEEEESSHHHH
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHcccC---ceeeeccchHHHH
Confidence 5789999998 5777999999998744 6789999987543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.55 E-value=0.021 Score=47.94 Aligned_cols=34 Identities=15% Similarity=0.057 Sum_probs=25.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+|||+||+|.+|+..++.....|.++ |...+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~--vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSR--VVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSE--EEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcc--eecccch
Confidence 789999999999999998777778542 4444443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=93.26 E-value=0.4 Score=37.99 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=49.7
Q ss_pred EEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEecc
Q 015874 14 TILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPGD 93 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD 93 (399)
.|+|+|. |-+|..+++.|.+.|.+ +.++...++.. .++.... ...++.++.||
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~---v~vId~d~~~~--~~~~~~~---------------------~~~~~~vi~Gd 57 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQN---VTVISNLPEDD--IKQLEQR---------------------LGDNADVIPGD 57 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCHHH--HHHHHHH---------------------HCTTCEEEESC
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCC---EEEEeccchhH--HHHHHHh---------------------hcCCcEEEEcc
Confidence 4888886 88999999999999954 46665544321 1111110 13578999999
Q ss_pred CCCCCCCCCchhhHHHH-hcCccEEEEccc
Q 015874 94 ISSEDLGLKDSNLKEEL-WNELDIMVNSAA 122 (399)
Q Consensus 94 l~~~~~~~~~~~~~~~~-~~~~D~Vih~Aa 122 (399)
.+ +.+.+++. .+++|+||-+..
T Consensus 58 ~~-------d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 58 SN-------DSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp TT-------SHHHHHHHTTTTCSEEEECSS
T ss_pred Cc-------chHHHHHhccccCCEEEEccc
Confidence 99 45555343 357899987654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=93.09 E-value=0.049 Score=44.56 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=30.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.-+|.+|+|.|+ |.||...+..+...| .++++..++..+.
T Consensus 27 ~~~~G~~VlI~Ga-G~vG~~a~qlak~~G---a~~i~~~~~~~~~ 67 (168)
T d1uufa2 27 QAGPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEAKR 67 (168)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGGGH
T ss_pred CCCCCCEEEEecc-chHHHHHHHHhhccc---ccchhhccchhHH
Confidence 3457789999986 889998888777778 4456777665543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=92.99 E-value=0.084 Score=43.61 Aligned_cols=41 Identities=10% Similarity=0.143 Sum_probs=31.7
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
..+|.+|+|+|+ |-||...+..+...|. .+|++..+++.+.
T Consensus 26 ~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~~~~ 66 (182)
T d1vj0a2 26 SFAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSPNRL 66 (182)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCHHHH
T ss_pred CCCCCEEEEECC-Cccchhheeccccccc--ccccccccccccc
Confidence 356789999996 8999999988888884 3578887765443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=92.82 E-value=0.21 Score=37.81 Aligned_cols=38 Identities=21% Similarity=0.187 Sum_probs=30.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
-.++|++|+|.| .|-+|..-++.|++.| ..|++.....
T Consensus 8 l~l~~k~vlVvG-~G~va~~ka~~ll~~g---a~v~v~~~~~ 45 (113)
T d1pjqa1 8 CQLRDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALTF 45 (113)
T ss_dssp ECCBTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESSC
T ss_pred EEeCCCEEEEEC-CCHHHHHHHHHHHHCC---CeEEEEeccC
Confidence 357899999998 7889999999999999 4556665443
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=92.71 E-value=0.076 Score=41.74 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=22.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPN 38 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~ 38 (399)
|+|.|.|++|=+|+.+.+.+.+.+++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~ 26 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHE 26 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCe
Confidence 68999999999999999888877743
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=92.55 E-value=0.16 Score=41.54 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=29.4
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+.-+|.+|+|.|+ |.||...+..+...|..+ |.+..+++.
T Consensus 25 ~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~--v~~~~~~~~ 64 (174)
T d1f8fa2 25 KVTPASSFVTWGA-GAVGLSALLAAKVCGASI--IIAVDIVES 64 (174)
T ss_dssp CCCTTCEEEEESC-SHHHHHHHHHHHHHTCSE--EEEEESCHH
T ss_pred CCCCCCEEEEeCC-CHHHhhhhhcccccccce--eeeeccHHH
Confidence 3457789999997 999999998887888643 555554443
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=92.53 E-value=0.022 Score=47.91 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=28.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|.|.|| |.+|+.++..++..|++ |.+..++.+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~---V~l~D~~~~~ 39 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTP---ILMKDINEHG 39 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCC---EEEECSSHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCe---EEEEECCHHH
Confidence 67999996 99999999999999954 5777776543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=92.39 E-value=0.055 Score=45.03 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=32.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~ 54 (399)
+.+|||+||+|.+|+..++.....| .+|++.+|+.++.+.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~G---a~Via~~~~~~k~~~ 71 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRESTHEY 71 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGGGHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcC---CCeEEEecchhHHHH
Confidence 3589999999999999998888889 556889998776533
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.14 E-value=0.21 Score=41.14 Aligned_cols=34 Identities=9% Similarity=0.197 Sum_probs=28.7
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.|.| +|-.|++++..|.++| +.|...+|+.+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g---~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNG---NEVRIWGTEFD 34 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHC---CEEEEECCGGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEEeccc
Confidence 7899998 6999999999999999 55677777654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.01 E-value=0.24 Score=42.79 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=29.9
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
+.+++.+|+|.| .|.+|++++..|.+.|- .+++++..
T Consensus 26 ~kL~~~~VliiG-~GglGs~va~~La~~Gv--g~i~lvD~ 62 (247)
T d1jw9b_ 26 EALKDSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDF 62 (247)
T ss_dssp HHHHHCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECC
T ss_pred HHHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECC
Confidence 457889999999 77799999999999993 45666543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.49 E-value=0.25 Score=39.30 Aligned_cols=34 Identities=12% Similarity=0.092 Sum_probs=26.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|-|.| .|.+|+.+++.|++.|+ .|.+..|+..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~---~v~~~~~~~~ 34 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGV---EVVTSLEGRS 34 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTC---EEEECCTTCC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCC---eEEEEcCchh
Confidence 6899996 79999999999999995 4455555443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=91.20 E-value=0.23 Score=41.18 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=31.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.|++|.|.| .|-||+.+++.+..-| .+|....|..
T Consensus 39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g---~~v~~~d~~~ 75 (181)
T d1qp8a1 39 LIQGEKVAVLG-LGEIGTRVGKILAALG---AQVRGFSRTP 75 (181)
T ss_dssp CCTTCEEEEES-CSTHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred cccCceEEEec-cccccccceeeeeccc---cccccccccc
Confidence 37899999998 8889999999999888 5667776654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=90.94 E-value=0.23 Score=40.42 Aligned_cols=43 Identities=16% Similarity=0.017 Sum_probs=32.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~ 54 (399)
.-+|.+|+|.|+ |.+|...+..+...|. .+|.+..+++++.+.
T Consensus 26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~--~~Vi~~~~~~~k~~~ 68 (176)
T d2jhfa2 26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGA--ARIIGVDINKDKFAK 68 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGGHHH
T ss_pred CCCCCEEEEECC-CCcHHHHHHHHHHcCC--ceEEeecCcHHHHHH
Confidence 456789999999 5588888888888775 457888777766533
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=90.87 E-value=0.16 Score=41.78 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=30.3
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.-+|.+|+|.|+ |.||...+..+...|. .+|++..+++.+
T Consensus 24 ~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~~r 64 (174)
T d1jqba2 24 DIEMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRPIC 64 (174)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCHHH
T ss_pred CCCCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchhhh
Confidence 4567889999986 9999988888777785 246777665543
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=90.78 E-value=0.093 Score=42.25 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=28.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.+.| +|-+|+++++.|++.| +++++..|+.+
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~---~~i~v~~r~~~ 34 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTP---HELIISGSSLE 34 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSS---CEEEEECSSHH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCC---CeEEEEcChHH
Confidence 6788996 9999999999999988 55677777653
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=90.58 E-value=0.43 Score=34.72 Aligned_cols=70 Identities=11% Similarity=0.202 Sum_probs=44.1
Q ss_pred CcEEEEecCcchhH-HHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 015874 12 NKTILVSGVTGFVA-KVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFV 90 (399)
Q Consensus 12 ~~~IlVTGatG~IG-~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (399)
+|+|.++|-.| +| +.|++.|.++|+ .|..-.+... ...+++++ .++.+.
T Consensus 1 ~~~ihfiGIgG-~GMs~LA~~L~~~G~---~VsGSD~~~~--~~t~~L~~------------------------~Gi~i~ 50 (89)
T d1j6ua1 1 HMKIHFVGIGG-IGMSAVALHEFSNGN---DVYGSNIEET--ERTAYLRK------------------------LGIPIF 50 (89)
T ss_dssp CCEEEEETTTS-HHHHHHHHHHHHTTC---EEEEECSSCC--HHHHHHHH------------------------TTCCEE
T ss_pred CcEEEEEeECH-HHHHHHHHHHHhCCC---eEEEEeCCCC--hhHHHHHH------------------------CCCeEE
Confidence 47899998555 45 579999999994 4566655432 23334443 456665
Q ss_pred eccCCCCCCCCCchhhHHHHhcCccEEEEccccc
Q 015874 91 PGDISSEDLGLKDSNLKEELWNELDIMVNSAAIT 124 (399)
Q Consensus 91 ~gDl~~~~~~~~~~~~~~~~~~~~D~Vih~Aa~~ 124 (399)
.+.-. +. +.+.|.||-+.|..
T Consensus 51 ~gh~~---------~~----i~~~d~vV~SsAI~ 71 (89)
T d1j6ua1 51 VPHSA---------DN----WYDPDLVIKTPAVR 71 (89)
T ss_dssp SSCCT---------TS----CCCCSEEEECTTCC
T ss_pred eeecc---------cc----cCCCCEEEEecCcC
Confidence 55211 11 25789999998874
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=90.37 E-value=0.16 Score=41.49 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=26.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.++|.|.|++|=+|+.+++.+.+.. ++.-+.++.|..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEeccc
Confidence 3689999999999999999887753 332234444443
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=90.21 E-value=0.43 Score=38.55 Aligned_cols=42 Identities=14% Similarity=-0.005 Sum_probs=30.2
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.-+|.+|+|.|+ |.+|...+..+...|.. .|++..+++.+.
T Consensus 25 ~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~--~vi~~~~~~~k~ 66 (176)
T d2fzwa2 25 KLEPGSVCAVFGL-GGVGLAVIMGCKVAGAS--RIIGVDINKDKF 66 (176)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTCS--EEEEECSCGGGH
T ss_pred CCCCCCEEEEecc-hhHHHHHHHHHHHHhcC--ceEEEcccHHHH
Confidence 3456789999998 56898888888888853 356665655544
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.93 E-value=0.13 Score=41.05 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=30.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.++||+|||.|| |.+|..-++.|++.| .+|+++.-.
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~G---A~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTG---CKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGT---CEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 488999999996 889999999999999 555666543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.79 E-value=0.16 Score=41.06 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=28.3
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+++|.+.| .|.+|+.+++.|+++|+ .|.+..|+..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~---~v~~~d~~~~ 35 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGY---LLNVFDLVQS 35 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSSHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCC---eEEEEECchh
Confidence 36899996 89999999999999995 5577766543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=89.67 E-value=0.59 Score=38.02 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=29.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.+|-+.| .|.+|+.+++.|++.|+ .|++..|+.++.
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~---~V~v~dr~~~~~ 38 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGF---VVCAFNRTVSKV 38 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTC---CEEEECSSTHHH
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCC---eEEEEcCCHHHH
Confidence 5788998 79999999999999995 458888877543
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=89.50 E-value=0.7 Score=34.91 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=30.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..+|.|.| .|.+|+-++....+.| .+++++..+.+.
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG---~~v~v~d~~~~~ 46 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLG---VEVIAVDRYADA 46 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTT---CEEEEEESSTTC
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCC---CEEEEEcCCCCC
Confidence 46899998 8999999999999999 566888776654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.11 E-value=0.46 Score=38.37 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=31.5
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+..+|.+|+|.|+ |.+|...+..+...|. .+|.+..+++.+
T Consensus 23 ~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~~r 63 (171)
T d1pl8a2 23 GVTLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSATR 63 (171)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCHHH
T ss_pred CCCCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCHHH
Confidence 4456789999986 9999999988888885 356777666544
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=89.07 E-value=0.13 Score=41.28 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=29.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|.+.| +|-+|+++++.|++.|+ ++|++..|+++
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~~ 35 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGAE 35 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSHH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCChh
Confidence 6899997 59999999999999884 56788877754
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.99 E-value=0.39 Score=45.32 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=30.1
Q ss_pred HHhhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 6 VVEFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 6 ~~~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+...+++.+|||.|+ |.+|+.+++.|+..|. ..+++...+
T Consensus 31 ~~~~l~~~kVlvvG~-GglG~ei~k~L~~~Gv--g~i~lvD~D 70 (426)
T d1yovb1 31 LQFLLDTCKVLVIGA-GGLGCELLKNLALSGF--RQIHVIDMD 70 (426)
T ss_dssp HHHHHHHCCEEEECS-STTHHHHHHHHHTTTC--CCEEEECCC
T ss_pred HHHHHhcCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEECC
Confidence 345577889999997 5599999999999884 345555443
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.61 E-value=0.23 Score=39.66 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.||+|+|.| .|++|-.++..|.+.++++ +|+++.+..
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 379999998 8999999999999999874 677775554
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.33 E-value=0.5 Score=37.86 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=30.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+.-+|.+|+|.|+ |.+|...+..+...| .+|.+..+++++
T Consensus 24 ~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G---~~Vi~~~~~~~~ 63 (166)
T d1llua2 24 NARPGQWVAISGI-GGLGHVAVQYARAMG---LHVAAIDIDDAK 63 (166)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCHHH
T ss_pred CCCCCCEEEEeec-cccHHHHHHHHHHcC---CccceecchhhH
Confidence 4466889999986 999998888777778 567888776544
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=88.31 E-value=0.32 Score=37.34 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=31.9
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++++|+|.| .|++|..++..|.+.| .+|+.+.|++..
T Consensus 28 ~~~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~~ 65 (121)
T d1d7ya2 28 RPQSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPRL 65 (121)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSST
T ss_pred hcCCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeecccc
Confidence 3468999997 8999999999999999 667888887654
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.18 E-value=0.47 Score=38.88 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=27.1
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN 38 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~ 38 (399)
.++||+|+|.|.+..+|+-|+.-|.++|..
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat 65 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNAT 65 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCc
Confidence 368999999999999999999999999843
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=88.15 E-value=0.2 Score=40.35 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=29.5
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
++|+|.|.|+||-||+..+.-+.+ .++-.+|.+++=...
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~lsa~~N 39 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRN 39 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHc-CCCCcEEEEEEeCCC
Confidence 358999999999999999988766 333367777765443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=87.95 E-value=0.31 Score=39.82 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=27.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPN 38 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~ 38 (399)
.+.||+|+|.|-+..+|+-|+..|.++|.+
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gat 63 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCT 63 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCE
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhcc
Confidence 378999999999999999999999998844
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=87.90 E-value=0.72 Score=37.56 Aligned_cols=41 Identities=15% Similarity=-0.006 Sum_probs=31.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
.-+|.+|+|.| .|.||...+..+...|. .+|++..+++.+.
T Consensus 26 v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~r~ 66 (174)
T d1e3ia2 26 VTPGSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDINGEKF 66 (174)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCGGGH
T ss_pred CCCCCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccchHHH
Confidence 45678999997 59999999998888885 3467776666554
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=87.78 E-value=0.79 Score=36.92 Aligned_cols=38 Identities=11% Similarity=0.233 Sum_probs=27.8
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+|.+|+|.|+ |.+|...+..+...|.. .|.+..++++
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~--~vv~~~~~~~ 68 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPA--TVIALDVKEE 68 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCC--EEEEEESSHH
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcCc--ccccccchhH
Confidence 45789999985 99999988888777853 3555555543
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=87.59 E-value=0.29 Score=39.37 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=29.0
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+|+|.|.|+||.||+..+.-+.+. ++-.+|.+++=...
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKN 38 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSC
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCc
Confidence 468999999999999999887664 33357777765443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=87.23 E-value=0.33 Score=37.39 Aligned_cols=69 Identities=9% Similarity=0.182 Sum_probs=45.0
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEec
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAALRFQNEVLAKDVFNVLKEKWGTRLNSFISEKITFVPG 92 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g 92 (399)
|.|+|.| -|-+|..+++.|. + ..|.++...++.. +... ..++.++.|
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~---~~i~vi~~d~~~~---~~~~------------------------~~~~~~i~G 47 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--G---SEVFVLAEDENVR---KKVL------------------------RSGANFVHG 47 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--G---GGEEEEESCTTHH---HHHH------------------------HTTCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHc--C---CCCEEEEcchHHH---HHHH------------------------hcCcccccc
Confidence 4688998 4778999999984 4 3356665554432 2222 157889999
Q ss_pred cCCCCCCCCCchhhHHHH-hcCccEEEEcc
Q 015874 93 DISSEDLGLKDSNLKEEL-WNELDIMVNSA 121 (399)
Q Consensus 93 Dl~~~~~~~~~~~~~~~~-~~~~D~Vih~A 121 (399)
|.+ +.+.+.+. +.+++.+|-+.
T Consensus 48 d~~-------~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 48 DPT-------RVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CTT-------SHHHHHHTTCTTCSEEEECC
T ss_pred ccC-------CHHHHHHhhhhcCcEEEEec
Confidence 999 44554332 35788888654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=87.12 E-value=1.5 Score=32.00 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=24.6
Q ss_pred CCcEEEEecCcchhH-HHHHHHHHHhCCCcCeEEEEEec
Q 015874 11 ENKTILVSGVTGFVA-KVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 11 ~~~~IlVTGatG~IG-~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
+.|+|.+.|..| +| +.|++.|.++|+ .|..-.+.
T Consensus 7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~---~VsGSD~~ 41 (96)
T d1p3da1 7 RVQQIHFIGIGG-AGMSGIAEILLNEGY---QISGSDIA 41 (96)
T ss_dssp TCCEEEEETTTS-TTHHHHHHHHHHHTC---EEEEEESC
T ss_pred hCCEEEEEEECH-HHHHHHHHHHHhCCC---EEEEEeCC
Confidence 457899988554 44 778999999995 45666554
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=87.09 E-value=0.95 Score=34.27 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=30.9
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++++|.| .|+||-.++..|.+.| .+|+++.|+...
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G---~~Vtiv~~~~~l 57 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLG---AEVTVLEAMDKF 57 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcC---CceEEEEeeccc
Confidence 37899998 8999999999999999 667888887643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=87.06 E-value=0.18 Score=40.65 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=28.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+|-|.| .|.+|+.+++.|++.| +.|++..|+.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G---~~V~~~d~~~~ 34 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAG---YSLVVSDRNPE 34 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCHH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCC---CeEEEEeCCcc
Confidence 6799997 7999999999999999 45677777653
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=86.98 E-value=0.32 Score=39.74 Aligned_cols=44 Identities=16% Similarity=-0.009 Sum_probs=33.7
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccH
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSA 54 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~ 54 (399)
+.-+|.+|+|.|+ |.+|...+..+...|. .+|++..+++++.+.
T Consensus 24 ~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~--~~Vi~~d~~~~kl~~ 67 (174)
T d1p0fa2 24 KVTPGSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHKDKFPK 67 (174)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGGHHH
T ss_pred CCCCCCEEEEECC-CchhHHHHHHHHHcCC--ceeeccCChHHHHHH
Confidence 3467789999985 9999999999888885 357777777665433
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.90 E-value=0.42 Score=36.65 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
++++|+|.| .|++|..++..|.+.| .+|+++-|...
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g---~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAG---KKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccc---eEEEEEEecCc
Confidence 568999997 8999999999999999 56688877653
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=86.83 E-value=0.63 Score=37.08 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=30.0
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
+..+|.+|+|.|+ |-||...+..+...| .+|++..+++++
T Consensus 24 ~~~~g~~vlv~G~-G~iG~~a~~~a~~~g---~~v~~~~~~~~r 63 (168)
T d1rjwa2 24 GAKPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGDEK 63 (168)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCHHH
T ss_pred CCCCCCEEEEeec-ccchhhhhHHHhcCC---CeEeccCCCHHH
Confidence 4567889999975 889998888877778 456777665543
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=86.51 E-value=0.56 Score=37.80 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=25.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEE-ecC
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFV-RAA 49 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~-R~~ 49 (399)
..+|.|.| +|.||+.+..++++..+. .++.+++ |+.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~-~el~avas~~~ 40 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKY-LEMGAMVGIDA 40 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSS-EEEEEEECSCT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCc-ceEEEEEecch
Confidence 46899999 999999876666765555 4666664 443
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=86.50 E-value=0.98 Score=36.74 Aligned_cols=45 Identities=18% Similarity=0.063 Sum_probs=34.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcccHHH
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADIDSAAL 56 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~~~~~ 56 (399)
.-+|.+|+|+|+ |.+|...+..+...|. .+|++..+++++.+.++
T Consensus 27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~kl~~Ak 71 (176)
T d1d1ta2 27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKDKFEKAM 71 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHHHHHHHH
Confidence 346789999985 9999999999888885 46788888777654443
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=86.50 E-value=0.71 Score=35.02 Aligned_cols=37 Identities=35% Similarity=0.599 Sum_probs=31.1
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
..++|+|.| .|++|-.++..|.+.| .+|+++.|....
T Consensus 21 ~p~~v~IiG-gG~iG~E~A~~l~~~g---~~Vtlv~~~~~i 57 (117)
T d1onfa2 21 ESKKIGIVG-SGYIAVELINVIKRLG---IDSYIFARGNRI 57 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSSSS
T ss_pred CCCEEEEEC-CchHHHHHHHHHHhcc---ccceeeehhccc
Confidence 357899998 7999999999999999 677888887643
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=86.34 E-value=0.79 Score=37.32 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=23.4
Q ss_pred CCcEEEEecCcchhHHH--HHHHHHHh-CCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKV--FIEKILRV-QPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~--l~~~Ll~~-g~~V~~v~~~~R~~~~ 51 (399)
+.|+|.|.|| |.+|.. ++..|+.. +....++....+++++
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~ 43 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEER 43 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchH
Confidence 3589999996 888865 33344432 2112466776665443
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=86.16 E-value=1.7 Score=36.20 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=29.4
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEec
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRA 48 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~ 48 (399)
.+.|++|.|.| .|-||+.+++.|..-| .+|.+..+.
T Consensus 40 el~gk~vgIiG-~G~IG~~va~~l~~fg---~~V~~~d~~ 75 (197)
T d1j4aa1 40 EVRDQVVGVVG-TGHIGQVFMQIMEGFG---AKVITYDIF 75 (197)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred cccCCeEEEec-ccccchhHHHhHhhhc---ccccccCcc
Confidence 47889999998 9999999999998888 455665444
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.14 E-value=0.33 Score=47.18 Aligned_cols=35 Identities=9% Similarity=0.172 Sum_probs=27.6
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
+.+.+.+|+|.|+ |.+|+.+++.|+..| |..++.+
T Consensus 21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~G--Vg~itiv 55 (529)
T d1yova1 21 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTII 55 (529)
T ss_dssp HHHHHCEEEECCC-SHHHHHHHHHHHTTT--CSEEEEE
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHhc--CCEEEEE
Confidence 4467789999996 669999999999988 3455555
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=86.14 E-value=0.49 Score=35.70 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=30.4
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|+|.| .|++|..++..|.+.| .+|+++.|....
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~~i 57 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFG---TKVTILEGAGEI 57 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSSS
T ss_pred CeEEEEC-CCccceeeeeeecccc---cEEEEEEeccee
Confidence 7899998 8999999999999999 667888887654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=86.03 E-value=1.6 Score=36.31 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=30.2
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
.+.|++|.|.| .|-||+.+++.|..-| .+|.+..+..
T Consensus 42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~ 78 (199)
T d1dxya1 42 ELGQQTVGVMG-TGHIGQVAIKLFKGFG---AKVIAYDPYP 78 (199)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred cccceeeeeee-cccccccccccccccc---eeeeccCCcc
Confidence 36789999998 9999999999998888 5567776654
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=86.02 E-value=0.17 Score=41.48 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=28.8
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
|+|-|.| .|.+|..+++.|++.|++ |++..|.+++
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~---V~~~dr~~~~ 36 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFK---VAVFNRTYSK 36 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCe---EEEEECCHHH
Confidence 6798997 999999999999999955 4777676544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=85.87 E-value=2.4 Score=34.71 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=29.2
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAA 49 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~ 49 (399)
+.+++|.|.| .|.||+.+++.|..-| .+|+...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~ 77 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLG---MYVYFYDIEN 77 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred ccceEEEEee-cccchhhhhhhccccc---ceEeeccccc
Confidence 6789999996 9999999999998877 4556666543
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=85.66 E-value=0.83 Score=36.91 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=27.0
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
|+.++|.|.| +|.+|+..++.|.+ .+++.-|.+..|+..
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~-~~~~elvav~~~~~~ 39 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK-QPDMDLVGIFSRRAT 39 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEEESSSC
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh-CCCcEEEEEEecccc
Confidence 4567899998 69999999988866 445433444445443
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=83.28 E-value=0.96 Score=37.50 Aligned_cols=42 Identities=12% Similarity=-0.052 Sum_probs=29.8
Q ss_pred hhcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCcc
Q 015874 8 EFLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADID 52 (399)
Q Consensus 8 ~~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~~ 52 (399)
+.-+|.+|+|.|+ |-+|...+..+...|. .+|.+..+++++.
T Consensus 22 ~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga--~~Vi~~d~~~~rl 63 (195)
T d1kola2 22 GVGPGSTVYVAGA-GPVGLAAAASARLLGA--AVVIVGDLNPARL 63 (195)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCHHHH
T ss_pred CCCCCCEEEEECc-CHHHHHHHHHHHhhcc--cceeeecccchhh
Confidence 4567889999985 8999777766666674 4577776665443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=83.23 E-value=1.6 Score=36.23 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=30.5
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
.+.|++|.|.| .|-||+.+++.|..-| .+|....|...
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~ 83 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFG---FNVLFYDPYLS 83 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSC
T ss_pred eeeCceEEEec-cccccccceeeeeccc---cceeeccCccc
Confidence 37889999997 9999999999998888 45566665443
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.98 E-value=0.58 Score=39.05 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=25.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEe
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVR 47 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R 47 (399)
|+|.|.| .||+|..++..|++.|+ +|++...
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~---~V~g~D~ 31 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGH---EVIGVDV 31 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECS
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCC---cEEEEeC
Confidence 6899995 99999999999999995 4566644
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.92 E-value=1.2 Score=36.09 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=28.0
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEE
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLF 45 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~ 45 (399)
.+.||+|+|.| .|.||+.+++.+...|. +|.+.
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~---~V~v~ 53 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGFGA---RVIIT 53 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEE
T ss_pred eecCCEEEEec-cccccHHHHHHHHhCCC---eeEee
Confidence 47899999998 99999999999999994 44554
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.78 E-value=0.68 Score=35.36 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=30.4
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++++|.| .|+||-.++..|.+.| .+|+++.|....
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG---~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLG---SKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhC---cceeEEEecccc
Confidence 37899998 8999999999999999 667888776643
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=82.76 E-value=0.73 Score=34.72 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=31.4
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++++|+|.| .|++|..++..|.+.| ..|..+.|....
T Consensus 20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g---~~vt~i~~~~~~ 57 (121)
T d1mo9a2 20 EPGSTVVVVG-GSKTAVEYGCFFNATG---RRTVMLVRTEPL 57 (121)
T ss_dssp CCCSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCTT
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcc---hhheEeeccchh
Confidence 4568999997 8999999999999999 667888877543
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.46 E-value=0.27 Score=40.47 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=27.9
Q ss_pred hcCCcEEEEecCcchhHHHHHHHHHHhCCCc
Q 015874 9 FLENKTILVSGVTGFVAKVFIEKILRVQPNV 39 (399)
Q Consensus 9 ~~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V 39 (399)
.++||+|+|.|-+.-+|+-++..|+++|..|
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTV 56 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATV 56 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEE
Confidence 5889999999999999999999999998443
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=82.39 E-value=0.69 Score=35.88 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=31.2
Q ss_pred CCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 11 ENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 11 ~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.+++|+|.| .|++|..++..|.+.| .+|+++.|....
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g---~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKAN---MHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSST
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhC---cceeeeeecccc
Confidence 468999997 8999999999999999 566888776543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=82.38 E-value=0.23 Score=41.44 Aligned_cols=37 Identities=11% Similarity=0.183 Sum_probs=30.1
Q ss_pred cCCcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 10 LENKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 10 ~~~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
+.+++|.|.| +|-.|++++..|.+.| +.|.+..|+++
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g---~~V~l~~r~~~ 41 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKC---REVCVWHMNEE 41 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTE---EEEEEECSCHH
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcC---CeEEEEEecHH
Confidence 4556899998 7889999999999998 55688877654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.04 E-value=3 Score=32.36 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=19.6
Q ss_pred EEEEecCcchhHHHHHHHHHHh
Q 015874 14 TILVSGVTGFVAKVFIEKILRV 35 (399)
Q Consensus 14 ~IlVTGatG~IG~~l~~~Ll~~ 35 (399)
||.|.|++|=+|+.+++.+.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~ 22 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA 22 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS
T ss_pred CEEEECCCCHHHHHHHHHHHhC
Confidence 6899999999999999987664
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=81.47 E-value=1.9 Score=33.16 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=29.1
Q ss_pred HhhcCCcEEEEecCc---chhHHHHHHHHHHhCCCcCeEEEEE
Q 015874 7 VEFLENKTILVSGVT---GFVAKVFIEKILRVQPNVKKLYLFV 46 (399)
Q Consensus 7 ~~~~~~~~IlVTGat---G~IG~~l~~~Ll~~g~~V~~v~~~~ 46 (399)
..+++.++|.|.||| |-.|..+++.|.+.| . .+|+...
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~-g~v~pVn 43 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK-K-GKVYPVN 43 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC-S-SEEEEEC
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC-C-CcEEEec
Confidence 346788999999999 889999999987644 2 4566663
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=81.44 E-value=0.83 Score=34.28 Aligned_cols=34 Identities=9% Similarity=0.193 Sum_probs=29.1
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCC
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAAD 50 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~ 50 (399)
++++|.| .|++|-.++..|.+.| .+|+++.|...
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g---~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLG---AQVSVVEARER 55 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcc---cceEEEeeecc
Confidence 7888887 8999999999999999 56688877654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=80.99 E-value=0.84 Score=34.38 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=29.6
Q ss_pred cEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 13 KTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
++|+|.| .|++|..++..|.+.| .+|+++.|....
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~~~ 56 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLG---AKTHLFEMFDAP 56 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccc---cEEEEEeecchh
Confidence 7899987 8999999999999999 567888777643
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=80.76 E-value=1.3 Score=35.92 Aligned_cols=18 Identities=17% Similarity=0.525 Sum_probs=14.6
Q ss_pred HHhcCccEEEEcccccCc
Q 015874 109 ELWNELDIMVNSAAITKF 126 (399)
Q Consensus 109 ~~~~~~D~Vih~Aa~~~~ 126 (399)
+.++++|+||.+|+....
T Consensus 73 eal~~AD~Vvitag~~~~ 90 (167)
T d1u8xx1 73 EAFTDVDFVMAHIRVGKY 90 (167)
T ss_dssp HHHSSCSEEEECCCTTHH
T ss_pred hccCCCCEEEECCCcCCC
Confidence 557899999999987543
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.68 E-value=0.89 Score=34.74 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=30.6
Q ss_pred CcEEEEecCcchhHHHHHHHHHHhCCCcCeEEEEEecCCc
Q 015874 12 NKTILVSGVTGFVAKVFIEKILRVQPNVKKLYLFVRAADI 51 (399)
Q Consensus 12 ~~~IlVTGatG~IG~~l~~~Ll~~g~~V~~v~~~~R~~~~ 51 (399)
.++|+|.| .|+||-.++..|.+.| .+|+++.|+...
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G---~~Vtlv~~~~~~ 57 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALG---SKTSLMIRHDKV 57 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCC---cEEEEEeecccc
Confidence 37899998 7999999999999999 667888887643
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=80.30 E-value=4.1 Score=32.02 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=21.3
Q ss_pred cEEEEecCcchhHHH-HHHHHHHhCCCcCeEEEE-EecCCc
Q 015874 13 KTILVSGVTGFVAKV-FIEKILRVQPNVKKLYLF-VRAADI 51 (399)
Q Consensus 13 ~~IlVTGatG~IG~~-l~~~Ll~~g~~V~~v~~~-~R~~~~ 51 (399)
++|.|.| +|.+|.. .+..|.. -.++ ++.++ .++.+.
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~-~~~~-~i~~v~d~~~~~ 39 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAA-ASDW-TLQGAWSPTRAK 39 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHS-CSSE-EEEEEECSSCTT
T ss_pred CEEEEEc-CCHHHHHHHHHHHHh-CCCc-EEEEEEechhHh
Confidence 5899998 6999975 4444443 3343 44444 355443
|