Citrus Sinensis ID: 015957

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
cHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccHHHHHHHHHHHcccccccccEEEEEEEccccEEEccccccccccccEEEcccccccHHHHHHcccHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHccccccEEEEEccccccccEEEEEEcccccEEEEEcccccHHHHHHHccccccccccccccHHHHHcHHHHHHHHccccccccccccccccccccccccEEEEEEEHHccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEccccccccccEEEcccccccccccHHHccccEEcccccccc
cccHHHHHHHHHHHHHcccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccHHHHHHHHHcccccccHccEEEEEccccccEccccEEEEcccccEEEccccccHHHHHHHHccHHHHHHHcccEEEEEEEcccEEEEEcccHEHHHHHHccccHHHHHHEcccccccEEEEEEEccccccEEEEEEcccHHHHHHHccccccEEEEHHHHHHHHHcHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEEEEEEcccccccEEEEEEccHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccEEEccccccccEEEEcccEccccccHHHHHcccEEcccEEEEc
MDERERWWKMGLKAISDGKLAVLLLSggqgtrlgssdpkgcvniglpsgkSLFQLQAERILCVQRLAAQvtsegggsgsAAIHWYImtspftddatrkyfeghkyfglesdqvtffqqgtipcvskdgrfimetpykvakapdgnggvySALKSSKLLEDMATRGIKYidcygvdnalvrvadptflgyFIDKGVSAGAKVVrkaypqekvgvfvrrgkggpltvveyseldpsLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGlekdsvyhlaekkipsihgqtvgFKLEQFIfdafpyapstaLFEVLreeefapvknangsnfdtpdSARLLVLRLHTRWVIAaggflthsvplyatgvevsplcsyageNLEAICRgrtfhapceigf
MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYkvakapdgngGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVrkaypqekvgvfvrrgkggpLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPvknangsnfdtpDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEkvgvfvrrgkggPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
*****RWWKMGLKAISDGKLAVLLLSGGQGTRL*****KGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKN*****FDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCE***
MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA*****ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
********KMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAA*********GSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
O64765502 Probable UDP-N-acetylgluc no no 0.997 0.788 0.843 0.0
Q91YN5522 UDP-N-acetylhexosamine py yes no 0.969 0.737 0.449 3e-92
Q16222522 UDP-N-acetylhexosamine py yes no 0.969 0.737 0.451 8e-92
Q28CH3511 UDP-N-acetylhexosamine py yes no 0.949 0.737 0.458 1e-91
Q7ZWD4505 UDP-N-acetylhexosamine py no no 0.957 0.752 0.452 1e-90
Q54GN5487 Probable UDP-N-acetylgluc yes no 0.979 0.798 0.424 1e-87
Q3KQV9507 UDP-N-acetylhexosamine py no no 0.964 0.755 0.449 9e-87
Q3TW96507 UDP-N-acetylhexosamine py no no 0.964 0.755 0.444 3e-86
O74933486 UDP-N-acetylglucosamine p N/A no 0.954 0.779 0.430 1e-83
P43123477 UDP-N-acetylglucosamine p yes no 0.931 0.775 0.428 5e-82
>sp|O64765|UAP1_ARATH Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1 Back     alignment and function desciption
 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/396 (84%), Positives = 366/396 (92%)

Query: 2   DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61
           ++RE+WWKMGLKAI +GKL V+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQ+QAERIL
Sbjct: 107 EDREKWWKMGLKAIYEGKLGVVLLSGGQGTRLGSSDPKGCYNIGLPSGKSLFQIQAERIL 166

Query: 62  CVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTI 121
           CVQRLA+Q  SE   +    I WYIMTSPFT + T+K+F+ HKYFGLE DQVTFFQQGT+
Sbjct: 167 CVQRLASQAMSEASPTRPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFFQQGTL 226

Query: 122 PCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRV 181
           PC+SKDG+FIMETP+ ++KAPDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDN LVRV
Sbjct: 227 PCISKDGKFIMETPFSLSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRV 286

Query: 182 ADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQ 241
           ADPTFLGYFIDK  ++ AKVVRKAYPQEKVGVFVRRGKGGPLTVVEY+ELD S+ASA NQ
Sbjct: 287 ADPTFLGYFIDKSAASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYTELDQSMASATNQ 346

Query: 242 ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFD 301
           +TGRL++CWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI+G  VG KLEQFIFD
Sbjct: 347 QTGRLQYCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSINGDIVGLKLEQFIFD 406

Query: 302 AFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVP 361
            FPYAPSTALFEVLREEEFAPVKNANGSN+DTP+SARLLVLRLHTRWVIAAGGFLTHSVP
Sbjct: 407 CFPYAPSTALFEVLREEEFAPVKNANGSNYDTPESARLLVLRLHTRWVIAAGGFLTHSVP 466

Query: 362 LYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF 397
           LYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI  
Sbjct: 467 LYATGVEVSPLCSYAGENLEAICRGRTFHAPCEISL 502

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 2EC: 3
>sp|Q91YN5|UAP1_MOUSE UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus GN=Uap1 PE=1 SV=1 Back     alignment and function description
>sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3 Back     alignment and function description
>sp|Q28CH3|UAP1L_XENTR UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus tropicalis GN=uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZWD4|UAP1L_DANRE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio GN=uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|Q54GN5|UAP1_DICDI Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium discoideum GN=uap1 PE=3 SV=1 Back     alignment and function description
>sp|Q3KQV9|UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=1 SV=2 Back     alignment and function description
>sp|Q3TW96|UAP1L_MOUSE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus GN=Uap1l1 PE=2 SV=1 Back     alignment and function description
>sp|O74933|UAP1_CANAX UDP-N-acetylglucosamine pyrophosphorylase OS=Candida albicans GN=UAP1 PE=1 SV=1 Back     alignment and function description
>sp|P43123|UAP1_YEAST UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QRI1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
449433495 503 PREDICTED: probable UDP-N-acetylglucosam 0.997 0.787 0.899 0.0
225423637485 PREDICTED: probable UDP-N-acetylglucosam 0.982 0.804 0.905 0.0
217074416492 unknown [Medicago truncatula] gi|3884973 0.982 0.792 0.887 0.0
356512205490 PREDICTED: probable UDP-N-acetylglucosam 0.994 0.806 0.906 0.0
356524976490 PREDICTED: probable UDP-N-acetylglucosam 0.994 0.806 0.904 0.0
297823295 498 UTP--glucose-1-phosphate uridylyltransfe 0.997 0.795 0.858 0.0
295126562 505 UTP:N-acetylglucosamine-1-P uridylyltran 0.997 0.784 0.856 0.0
30692244 505 N-acetylglucosamine-1-phosphate uridylyl 0.997 0.784 0.856 0.0
297846082 500 F17F8.1 [Arabidopsis lyrata subsp. lyrat 0.997 0.792 0.853 0.0
15226877 502 putative UDP-N-acetylglucosamine pyropho 0.997 0.788 0.843 0.0
>gi|449433495|ref|XP_004134533.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] gi|449490659|ref|XP_004158669.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/397 (89%), Positives = 378/397 (95%), Gaps = 1/397 (0%)

Query: 1   MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI 60
           +DERERWWK GLKAISDGKLAVLLLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERI
Sbjct: 108 LDERERWWKTGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERI 167

Query: 61  LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGT 120
           L VQRLAAQ  ++   S SA IHWY+MTSPFTD+ATR +FE  KYFGLE++QVTFFQQGT
Sbjct: 168 LRVQRLAAQAATDNSIS-SAPIHWYVMTSPFTDEATRNFFESQKYFGLEANQVTFFQQGT 226

Query: 121 IPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVR 180
           IPC+SKDGRF+METPY+V+KAPDGNGGVY+AL+SS LLEDM++RGIKYIDCYGVDNALVR
Sbjct: 227 IPCISKDGRFVMETPYRVSKAPDGNGGVYAALRSSHLLEDMSSRGIKYIDCYGVDNALVR 286

Query: 181 VADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN 240
           VADPTFLGYFIDKGVSA AKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN
Sbjct: 287 VADPTFLGYFIDKGVSAAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN 346

Query: 241 QETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIF 300
           Q TGRLRFCWSNVCLHMFTLDFLNQVANGLEKDS+YHLAEKKIPSIHGQT+G K+EQFIF
Sbjct: 347 QVTGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGQTMGLKMEQFIF 406

Query: 301 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSV 360
           DAFPYAPSTALFE+LREEEFAPVKNANGSNFDTPDSARLLVLRLH RWV+AAGGFLTHSV
Sbjct: 407 DAFPYAPSTALFEILREEEFAPVKNANGSNFDTPDSARLLVLRLHARWVVAAGGFLTHSV 466

Query: 361 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF 397
           PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI F
Sbjct: 467 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEISF 503

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225423637|ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase [Vitis vinifera] gi|297738002|emb|CBI27203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|217074416|gb|ACJ85568.1| unknown [Medicago truncatula] gi|388497374|gb|AFK36753.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356512205|ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|356524976|ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|297823295|ref|XP_002879530.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325369|gb|EFH55789.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|295126562|gb|ADF80194.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-1 [synthetic construct] Back     alignment and taxonomy information
>gi|30692244|ref|NP_564372.3| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|15450739|gb|AAK96641.1| At1g31070/F17F8_1 [Arabidopsis thaliana] gi|332193190|gb|AEE31311.1| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297846082|ref|XP_002890922.1| F17F8.1 [Arabidopsis lyrata subsp. lyrata] gi|297336764|gb|EFH67181.1| F17F8.1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15226877|ref|NP_181047.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|6136087|sp|O64765.1|UAP1_ARATH RecName: Full=Probable UDP-N-acetylglucosamine pyrophosphorylase gi|18087511|gb|AAL58890.1|AF462794_1 At2g35020/F19I3.25 [Arabidopsis thaliana] gi|3033397|gb|AAC12841.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|56382033|gb|AAV85735.1| At2g35020 [Arabidopsis thaliana] gi|295126564|gb|ADF80195.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-2 [Arabidopsis thaliana] gi|330253956|gb|AEC09050.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:2015791505 GlcNAc1pUT1 "N-acetylglucosami 0.992 0.780 0.832 1.1e-181
TAIR|locus:2044787502 GlcNAc1pUT2 "N-acetylglucosami 0.992 0.784 0.817 6.3e-179
UNIPROTKB|F1MJP7522 UAP1 "Uncharacterized protein" 0.866 0.659 0.482 4.5e-84
UNIPROTKB|F1S210521 UAP1 "Uncharacterized protein" 0.866 0.660 0.479 4.5e-84
UNIPROTKB|F1P7W7522 UAP1 "Uncharacterized protein" 0.866 0.659 0.479 5.7e-84
UNIPROTKB|Q16222522 UAP1 "UDP-N-acetylhexosamine p 0.866 0.659 0.476 1.5e-83
MGI|MGI:1334459522 Uap1 "UDP-N-acetylglucosamine 0.866 0.659 0.471 2.5e-83
UNIPROTKB|G4MYL3504 MGG_15671 "Uncharacterized pro 0.954 0.751 0.463 3.1e-83
ASPGD|ASPL0000037237505 ungA [Emericella nidulans (tax 0.957 0.752 0.454 1.7e-82
UNIPROTKB|E1BZG2511 UAP1L1 "Uncharacterized protei 0.911 0.708 0.458 3e-78
TAIR|locus:2015791 GlcNAc1pUT1 "N-acetylglucosamine-1-phosphate uridylyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1763 (625.7 bits), Expect = 1.1e-181, P = 1.1e-181
 Identities = 329/395 (83%), Positives = 357/395 (90%)

Query:     1 MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI 60
             M++RE+WWKMGLK I +GKL V+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQ+QAERI
Sbjct:   110 MEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQIQAERI 169

Query:    61 LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGT 120
             LCVQRLAAQV SEG       IHWYIMTSPFTD+ATRKYF  HKYFGLE DQ++FFQQGT
Sbjct:   170 LCVQRLAAQVVSEGP-IRPVTIHWYIMTSPFTDEATRKYFSSHKYFGLEPDQISFFQQGT 228

Query:   121 IPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVR 180
             +PCV+KDG+FIMETP+ +AKAPDGNGGVY+ALK S+LLEDMA+RGIKY+DCYGVDN LVR
Sbjct:   229 LPCVTKDGKFIMETPFSLAKAPDGNGGVYAALKCSRLLEDMASRGIKYVDCYGVDNVLVR 288

Query:   181 VADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAIN 240
             VADPTFLGYFIDKG ++ AKVVRKAYPQE            PLTVVEYSELD S+ASAIN
Sbjct:   289 VADPTFLGYFIDKGAASAAKVVRKAYPQEQVGVFVRRGKGGPLTVVEYSELDQSMASAIN 348

Query:   241 QETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIF 300
             Q TGRL++CWSNVCLHMFTLDFLNQVA GLEKDSVYHLAEKKIPS++G T+G KLEQFIF
Sbjct:   349 QRTGRLQYCWSNVCLHMFTLDFLNQVATGLEKDSVYHLAEKKIPSMNGYTMGLKLEQFIF 408

Query:   301 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSV 360
             D+FPYAPSTALFEVLREEEFAPVKN NGSNFDTP+SARLLVLRLHTRWVIAAGGFLTHSV
Sbjct:   409 DSFPYAPSTALFEVLREEEFAPVKNVNGSNFDTPESARLLVLRLHTRWVIAAGGFLTHSV 468

Query:   361 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 395
             PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI
Sbjct:   469 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 503
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0003977 "UDP-N-acetylglucosamine diphosphorylase activity" evidence=IDA
GO:0006047 "UDP-N-acetylglucosamine metabolic process" evidence=IDA
GO:0019276 "UDP-N-acetylgalactosamine metabolic process" evidence=IDA
GO:0052630 "UDP-N-acetylgalactosamine diphosphorylase activity" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2044787 GlcNAc1pUT2 "N-acetylglucosamine-1-phosphate uridylyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MJP7 UAP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S210 UAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7W7 UAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q16222 UAP1 "UDP-N-acetylhexosamine pyrophosphorylase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1334459 Uap1 "UDP-N-acetylglucosamine pyrophosphorylase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZG2 UAP1L1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7.230.824
3rd Layer2.7.70.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
PLN02435493 PLN02435, PLN02435, probable UDP-N-acetylglucosami 0.0
cd04193323 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl 1e-175
PTZ00339482 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph 1e-108
COG4284472 COG4284, COG4284, UDP-glucose pyrophosphorylase [C 2e-82
cd04180266 cd04180, UGPase_euk_like, Eukaryotic UGPase-like i 5e-63
pfam01704417 pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly 5e-44
PLN02830 615 PLN02830, PLN02830, UDP-sugar pyrophosphorylase 7e-28
cd06424315 cd06424, UGGPase, UGGPase catalyzes the synthesis 7e-25
cd00897300 cd00897, UGPase_euk, Eukaryotic UGPase catalyses t 2e-11
PLN02474469 PLN02474, PLN02474, UTP--glucose-1-phosphate uridy 3e-04
>gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information 
 Score =  853 bits (2205), Expect = 0.0
 Identities = 357/397 (89%), Positives = 382/397 (96%), Gaps = 1/397 (0%)

Query: 1   MDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI 60
            ++RERWWKMGLKAIS+GKLAV+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERI
Sbjct: 98  PEDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERI 157

Query: 61  LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGT 120
           LCVQRLAAQ +SEG G     IHWYIMTSPFTD+ATRK+FE HKYFGLE+DQVTFFQQGT
Sbjct: 158 LCVQRLAAQASSEGPG-RPVTIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGT 216

Query: 121 IPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVR 180
           +PCVSKDG+FIMETP+KVAKAPDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDNALVR
Sbjct: 217 LPCVSKDGKFIMETPFKVAKAPDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVR 276

Query: 181 VADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN 240
           VADPTFLGYFIDKGV++ AKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELD ++ASAIN
Sbjct: 277 VADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAIN 336

Query: 241 QETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIF 300
           Q+TGRLR+CWSNVCLHMFTLDFLNQVANGLEKDS+YHLAEKKIPSIHG T+G KLEQFIF
Sbjct: 337 QQTGRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIF 396

Query: 301 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSV 360
           DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTP+SARLLVLRLHTRWV+AAGGFLTHSV
Sbjct: 397 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPESARLLVLRLHTRWVVAAGGFLTHSV 456

Query: 361 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF 397
           PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI F
Sbjct: 457 PLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEISF 493

Length = 493
>gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase Back     alignment and domain information
>gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>gnl|CDD|132998 cd00897, UGPase_euk, Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>gnl|CDD|178092 PLN02474, PLN02474, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
PLN02435493 probable UDP-N-acetylglucosamine pyrophosphorylase 100.0
PTZ00339482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 100.0
KOG2388477 consensus UDP-N-acetylglucosamine pyrophosphorylas 100.0
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 100.0
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 100.0
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 100.0
PLN02474469 UTP--glucose-1-phosphate uridylyltransferase 100.0
PF01704420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 100.0
PLN02830615 UDP-sugar pyrophosphorylase 100.0
COG4284472 UDP-glucose pyrophosphorylase [Carbohydrate transp 100.0
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 100.0
KOG2638498 consensus UDP-glucose pyrophosphorylase [Carbohydr 100.0
COG1207 460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 99.82
PRK14356 456 glmU bifunctional N-acetylglucosamine-1-phosphate 99.33
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 99.32
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 99.32
PRK14359 430 glmU bifunctional N-acetylglucosamine-1-phosphate 99.29
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 99.28
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 99.28
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 99.27
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 99.23
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 99.21
PRK14357 448 glmU bifunctional N-acetylglucosamine-1-phosphate 99.21
COG1208358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 99.2
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 99.19
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 99.19
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 99.18
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 99.15
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 99.15
PRK14360 450 glmU bifunctional N-acetylglucosamine-1-phosphate 99.15
PRK10122297 GalU regulator GalF; Provisional 99.15
PRK14358 481 glmU bifunctional N-acetylglucosamine-1-phosphate 99.14
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 99.12
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 99.12
PRK14352 482 glmU bifunctional N-acetylglucosamine-1-phosphate 99.09
KOG1322371 consensus GDP-mannose pyrophosphorylase/mannose-1- 99.08
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 99.08
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 99.07
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 99.07
PLN02917293 CMP-KDO synthetase 99.07
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 99.07
PLN02241436 glucose-1-phosphate adenylyltransferase 99.06
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 99.05
cd04181217 NTP_transferase NTP_transferases catalyze the tran 99.04
PRK14355 459 glmU bifunctional N-acetylglucosamine-1-phosphate 99.03
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 98.99
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 98.98
KOG1460407 consensus GDP-mannose pyrophosphorylase [Carbohydr 98.98
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 98.97
PRK14354 458 glmU bifunctional N-acetylglucosamine-1-phosphate 98.92
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 98.92
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 98.91
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 98.9
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 98.89
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 98.88
PRK14353 446 glmU bifunctional N-acetylglucosamine-1-phosphate 98.88
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 98.87
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 98.85
TIGR01173 451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 98.85
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 98.81
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 98.81
PRK09451 456 glmU bifunctional N-acetylglucosamine-1-phosphate 98.8
TIGR01479 468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 98.68
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 98.6
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 98.52
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 98.51
PRK13368238 3-deoxy-manno-octulosonate cytidylyltransferase; P 98.41
PF12804160 NTP_transf_3: MobA-like NTP transferase domain; PD 98.28
cd02513223 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- 98.28
PRK13385230 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 98.19
COG1213239 Predicted sugar nucleotidyltransferases [Cell enve 98.17
TIGR00454183 conserved hypothetical protein TIGR00454. At this 98.13
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 98.12
cd04182186 GT_2_like_f GT_2_like_f is a subfamily of the glyc 98.12
TIGR00466238 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe 98.01
TIGR03310188 matur_ygfJ molybdenum hydroxylase accessory protei 97.93
cd02516218 CDP-ME_synthetase CDP-ME synthetase is involved in 97.88
COG0746192 MobA Molybdopterin-guanine dinucleotide biosynthes 97.81
TIGR03202190 pucB xanthine dehydrogenase accessory protein pucB 97.78
PF01128221 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly 97.76
TIGR00453217 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 97.75
PRK09382378 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp 97.68
PRK00155227 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 97.67
cd02503181 MobA MobA catalyzes the formation of molybdopterin 97.67
PLN02728252 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 97.62
PRK02726200 molybdopterin-guanine dinucleotide biosynthesis pr 97.61
PRK14489366 putative bifunctional molybdopterin-guanine dinucl 97.59
COG2266177 GTP:adenosylcobinamide-phosphate guanylyltransfera 97.58
cd02518233 GT2_SpsF SpsF is a glycosyltrnasferase implicated 97.42
PRK15460 478 cpsB mannose-1-phosphate guanyltransferase; Provis 97.36
PRK00560196 molybdopterin-guanine dinucleotide biosynthesis pr 97.29
TIGR02665186 molyb_mobA molybdopterin-guanine dinucleotide bios 97.15
COG0836333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 97.14
PRK00317193 mobA molybdopterin-guanine dinucleotide biosynthes 97.09
COG1211230 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt 97.08
COG1210291 GalU UDP-glucose pyrophosphorylase [Cell envelope 97.03
PRK14490369 putative bifunctional molybdopterin-guanine dinucl 96.88
PRK14500346 putative bifunctional molybdopterin-guanine dinucl 96.88
COG4750231 LicC CTP:phosphocholine cytidylyltransferase invol 96.48
TIGR03584222 PseF pseudaminic acid CMP-transferase. The sequenc 95.87
COG2068199 Uncharacterized MobA-related protein [General func 95.3
PF14134513 DUF4301: Domain of unknown function (DUF4301) 91.26
COG1212247 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase 86.98
KOG1462433 consensus Translation initiation factor 2B, gamma 81.48
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information 
Probab=100.00  E-value=4.8e-113  Score=873.25  Aligned_cols=395  Identities=90%  Similarity=1.458  Sum_probs=370.1

Q ss_pred             hHHHHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcc
Q 015957            2 DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAA   81 (397)
Q Consensus         2 ~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~   81 (397)
                      ++.++|+++|+++|++||||||+||||||||||+++||||+||++|++|||||++++||+++|+++.+..+. .+.++++
T Consensus        99 ~~~~~~~~~Gl~~I~~gkvavvlLAGGqGTRLG~~~PKg~~~Iglps~kslfql~~e~I~~lq~la~~~~~~-~~~~~~~  177 (493)
T PLN02435         99 EDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAQASSE-GPGRPVT  177 (493)
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEeCCCcccccCCCCCccceecCCCCCCcHHHHHHHHHHHHHHHHHhhccc-ccCCCCc
Confidence            456789999999999999999999999999999999999999999999999999999999999998765421 0125788


Q ss_pred             eeEEEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHH
Q 015957           82 IHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM  161 (397)
Q Consensus        82 ipl~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l  161 (397)
                      ||||||||+.||+.|++||++|+|||++++||+||+|+++||++.+|+++|+++++++|+|+||||+|.+|+++|+|++|
T Consensus       178 IPl~IMTS~~T~~~T~~ff~~~~~FGl~~~~V~fF~Q~~~P~~~~dg~i~l~~~~~i~~~P~GnGgiy~aL~~sG~Ld~l  257 (493)
T PLN02435        178 IHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAKAPDGNGGVYAALKSSRLLEDM  257 (493)
T ss_pred             eeEEEeCCcchhHHHHHHHHhCCCCCCCccceEEEecCCcceECCCCCcccCCCcccccCCCCCcHHHHHHHHCCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccC
Q 015957          162 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQ  241 (397)
Q Consensus       162 ~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~  241 (397)
                      +++|++|+||+|+||+|++++||.|+||++.+++++++||++|++|+|+||++|+.+.+|+++||||+|+++++++.+++
T Consensus       258 ~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~d~~~kVv~K~~~~EkvG~i~~~~~~g~~~vvEYsEl~~~~~~~~~~  337 (493)
T PLN02435        258 ASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAINQ  337 (493)
T ss_pred             HhcCCEEEEEEecccccccccCHHHHHHHHhcCCceEEEeeecCCCCCceeEEEEecCCCCEEEEEeccCCHHHHhccCc
Confidence            99999999999999999999999999999999999999999999999999999996558999999999999999888776


Q ss_pred             CCCceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCCCcchhhhhHHHhhhcccCCceeEEEEecCcccc
Q 015957          242 ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFA  321 (397)
Q Consensus       242 ~~g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~~~~~~klE~fi~D~~~~~~~~~~~~v~R~~~Fs  321 (397)
                      ++|++.|++||||+|+||++||+++++..+..+|||+|+|||||+++.+||+|||+||||+|++++++.+++|+|++|||
T Consensus       338 ~~g~L~~~~gnI~~h~fs~~fL~~~~~~~~~~l~~H~A~Kkip~~~~~~ngiK~E~FiFDvf~~a~~~~~~eV~R~~EFa  417 (493)
T PLN02435        338 QTGRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPSTALFEVLREEEFA  417 (493)
T ss_pred             cccccccchhhHHHhhccHHHHHHHHHhhhhcCCceeeccccCccCCCcceEEeeeeeecchhhcCceEEEEEchhhccC
Confidence            67999999999999999999999998766667999999999999999899999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeecCCCCCCCcEEeCcccceeCCcchhhhcCcEecCCccccC
Q 015957          322 PVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIGF  397 (397)
Q Consensus       322 PvKn~~~~~~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~~~~~~~~~p~~~~~  397 (397)
                      ||||++|.+.|||+|||++|+++|++||+++|+.+.++.+.....|||||++||+||||+.+++|++|+.|.+++|
T Consensus       418 PlKN~~g~~~Dsp~tar~~l~~~~~~wl~~aG~~~~~~~~~~~~~vEisP~~sY~gE~L~~~~~~~~~~~~~~~~~  493 (493)
T PLN02435        418 PVKNANGSNFDTPESARLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEISF  493 (493)
T ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCEecCCccccCCcEEeCCceeeCCCCchhhcCCCeecCceeecC
Confidence            9999999888999999999999999999999998754332223469999999999999999999999999999876

>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>PLN02917 CMP-KDO synthetase Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B Back     alignment and domain information
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety Back     alignment and domain information
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00454 conserved hypothetical protein TIGR00454 Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase Back     alignment and domain information
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] Back     alignment and domain information
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB Back     alignment and domain information
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] Back     alignment and domain information
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional Back     alignment and domain information
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional Back     alignment and domain information
>PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional Back     alignment and domain information
>COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03584 PseF pseudaminic acid CMP-transferase Back     alignment and domain information
>COG2068 Uncharacterized MobA-related protein [General function prediction only] Back     alignment and domain information
>PF14134 DUF4301: Domain of unknown function (DUF4301) Back     alignment and domain information
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
1jv1_A505 Crystal Structure Of Human Agx1 Complexed With Udpg 2e-90
1jvd_A522 Crystal Structure Of Human Agx2 Complexed With Udpg 2e-89
1vm8_A534 Crystal Structure Of Udp-N-Acetylglucosamine Pyroph 3e-87
2yqc_A486 Crystal Structure Of Uridine-Diphospho-N-Acetylgluc 3e-82
3oc9_A405 Crystal Structure Of Putative Udp-N-Acetylglucosami 1e-54
2i5k_A488 Crystal Structure Of Ugp1p Length = 488 7e-05
3r2w_A528 Crystal Strucutre Of Udp-Glucose Pyrophosphorylase 1e-04
>pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 Back     alignment and structure 
Iteration: 1

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 190/420 (45%), Positives = 251/420 (59%), Gaps = 38/420 (9%)
Query: 2   DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61
           D+ + W   GL  IS  K+AVLLL+GGQGTRLG + PKG  ++GLPS K+LFQ+QAERIL
Sbjct: 85  DQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERIL 144
Query: 62  CVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTI 121
            +Q++A     E        I WYIMTS  T ++T+++F  HKYFGL+ + V FFQQG +
Sbjct: 145 KLQQVA-----EKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGML 199
Query: 122 PCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRV 181
           P +S DG+ I+E   KV+ APDGNGG+Y AL +  ++EDM  RGI  I  Y VDN LV+V
Sbjct: 200 PAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV 259
Query: 182 ADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQ 241
           ADP F+G+ I KG   GAKVV K  P E               VVEYSE+  SLA+A  +
Sbjct: 260 ADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGV--YQVVEYSEI--SLATAQKR 315
Query: 242 ET-GRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI--HGQTV------G 292
            + GRL F   N+  H FT+ FL  V N  E    +H+A+KKIP +   GQ +      G
Sbjct: 316 SSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNG 375
Query: 293 FKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSN-FDTPDSARLLVLRLHTRWVIA 351
            K+E+F+FD F +A    ++EVLRE+EF+P+KNA+  N  D P +AR  ++ LH  WV+ 
Sbjct: 376 IKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLN 435
Query: 352 AGGFL----------------THSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 395
           AGG                   + VP+     E+SPL SYAGE LE+    + FHAP  I
Sbjct: 436 AGGHFIDENGSRLPAIPRLKDANDVPIQC---EISPLISYAGEGLESYVADKEFHAPLII 492
>pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 Back     alignment and structure
>pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 Back     alignment and structure
>pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 Back     alignment and structure
>pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 Back     alignment and structure
>pdb|2I5K|A Chain A, Crystal Structure Of Ugp1p Length = 488 Back     alignment and structure
>pdb|3R2W|A Chain A, Crystal Strucutre Of Udp-Glucose Pyrophosphorylase Of Homo Sapiens Length = 528 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 1e-141
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 1e-141
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 1e-140
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 2e-94
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 5e-90
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 5e-88
3ogz_A 630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 1e-86
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 6e-86
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 2e-84
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 Back     alignment and structure
 Score =  410 bits (1055), Expect = e-141
 Identities = 175/410 (42%), Positives = 246/410 (60%), Gaps = 25/410 (6%)

Query: 2   DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61
           D  + W ++GLKAI +G++AVLL++GGQGTRLGSS PKGC NI LPS KSLFQ+QAE+IL
Sbjct: 86  DILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKIL 145

Query: 62  CVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTI 121
            +++LA Q            I+WYIMTS  T +AT  +F  + YFGL S QV FF QGT+
Sbjct: 146 KIEQLAQQYLKSTKKPI---INWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTL 202

Query: 122 PCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVR 180
           PC +  G + ++E    + ++PDGNGG+Y ALK + +L+D+ ++GIK+I  Y VDN LV+
Sbjct: 203 PCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVK 262

Query: 181 VADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAIN 240
           VADP F+G+ I K      KVVRK    E VG+ V         V+EYSE+   LA+  +
Sbjct: 263 VADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKD 322

Query: 241 -QETGRLRFCWSNVCLHMFTLDFLNQVAN---GLEKDSVYHLAEKKIPSIHGQT------ 290
            Q++ +L    +N+  H ++++FLN++       +K   +H+A+KKIPS++ +       
Sbjct: 323 PQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKP 382

Query: 291 ---VGFKLEQFIFDAFPYAPST--ALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLH 345
               G KLEQFIFD FP          EV R +EF+P+KNA+G+  DTP + R   L   
Sbjct: 383 TEPNGIKLEQFIFDVFPSVELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRNHYLERS 442

Query: 346 TRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 395
           ++WVI  GG + +        VEV    SY GE LE +  G+ F     I
Sbjct: 443 SKWVIQNGGVIDNQG-----LVEVDSKTSYGGEGLEFV-NGKHFKNGDII 486
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 100.0
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 100.0
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 100.0
3ogz_A 630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 100.0
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 100.0
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 100.0
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 100.0
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 100.0
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 100.0
3st8_A 501 Bifunctional protein GLMU; acetyltransferase, pyro 99.7
3oam_A252 3-deoxy-manno-octulosonate cytidylyltransferase; c 99.27
4ecm_A269 Glucose-1-phosphate thymidylyltransferase; HET: DA 99.22
1fxo_A293 Glucose-1-phosphate thymidylyltransferase; rhamnos 99.12
1mc3_A296 Glucose-1-phosphate thymidylyltransferase; glucose 99.12
1lvw_A295 Glucose-1-phosphate thymidylyltransferase; protein 99.08
3juk_A281 UDP-glucose pyrophosphorylase (GALU); transfer; HE 99.06
4fce_A 459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 99.03
3pnn_A303 Conserved domain protein; structural genomics, PSI 99.01
3k8d_A264 3-deoxy-manno-octulosonate cytidylyltransferase; K 99.01
1hm9_A 468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 98.98
2v0h_A 456 Bifunctional protein GLMU; cell WALL, magnesium, c 98.97
3tqd_A256 3-deoxy-manno-octulosonate cytidylyltransferase; c 98.95
3brk_X420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 98.94
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 98.94
2qh5_A308 PMI, ALGA, mannose-6-phosphate isomerase; structur 98.92
1tzf_A259 Glucose-1-phosphate cytidylyltransferase; nucleoti 98.92
1yp2_A451 Glucose-1-phosphate adenylyltransferase small subu 98.86
2e3d_A302 UTP--glucose-1-phosphate uridylyltransferase; UDP- 98.77
2pa4_A323 UTP-glucose-1-phosphate uridylyltransferase; phosp 98.77
1h7e_A245 3-deoxy-manno-octulosonate cytidylyltransferase; n 98.74
4fcu_A253 3-deoxy-manno-octulosonate cytidylyltransferase; s 98.73
2y6p_A234 3-deoxy-manno-octulosonate cytidylyltransferase; l 98.72
2ux8_A297 Glucose-1-phosphate uridylyltransferase; UGPG, GAL 98.71
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 98.65
2x65_A336 Mannose-1-phosphate guanylyltransferase; nucleotid 98.64
1vic_A262 3-deoxy-manno-octulosonate cytidylyltransferase; s 98.64
1ezi_A228 CMP-N-acetylneuraminic acid synthetase; homodimer, 98.51
2cu2_A337 Putative mannose-1-phosphate guanylyl transferase; 98.43
3f1c_A246 Putative 2-C-methyl-D-erythritol 4-phosphate cytid 98.4
1qwj_A229 Cytidine monophospho-N-acetylneuraminic acid synth 98.37
2xwl_A223 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 98.32
3q80_A231 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; 98.3
2ggo_A401 401AA long hypothetical glucose-1-phosphate thymid 98.29
2vsh_A236 TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly 98.28
2xme_A232 CTP-inositol-1-phosphate cytidylyltransferase; CDP 98.27
1vgw_A231 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; 98.23
2waw_A199 MOBA relate protein; unknown function; HET: PGE; 1 98.23
3rsb_A196 Adenosylcobinamide-phosphate guanylyltransferase; 98.21
2wee_A197 MOBA-related protein; unknown function; 1.65A {Myc 98.16
3d5n_A197 Q97W15_sulso; NESG, SSR125, structural genomics, P 98.15
1vpa_A234 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 98.14
1i52_A236 4-diphosphocytidyl-2-C-methylerythritol synthase; 98.07
3ngw_A208 Molybdopterin-guanine dinucleotide biosynthesis P 97.92
2dpw_A232 Hypothetical protein TTHA0179; transferase, struct 97.91
2yc3_A228 2-C-methyl-D-erythritol 4-phosphate cytidylyltran 97.82
1w55_A371 ISPD/ISPF bifunctional enzyme; biosynthetic pathwa 97.7
2e8b_A201 Probable molybdopterin-guanine dinucleotide biosy 97.63
2px7_A236 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 97.53
1e5k_A201 Molybdopterin-guanine dinucleotide biosynthesis pr 97.44
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Back     alignment and structure
Probab=100.00  E-value=1.1e-105  Score=806.11  Aligned_cols=376  Identities=35%  Similarity=0.595  Sum_probs=353.8

Q ss_pred             HHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeE
Q 015957            5 ERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHW   84 (397)
Q Consensus         5 ~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~ipl   84 (397)
                      ++|+++|+++|++||||||+||||+|||||++.||+|+||+++++|||||+++++|+++|+++.++..  +  .++.|||
T Consensus        21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~--~--~~~~Ip~   96 (405)
T 3oc9_A           21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSH--Q--KNVMIHW   96 (405)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHC--C--SCCCCEE
T ss_pred             HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhcc--c--cCCCCCE
Confidence            58999999999999999999999999999999999999999999999999999999999999876421  1  3577999


Q ss_pred             EEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHHHHC
Q 015957           85 YIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATR  164 (397)
Q Consensus        85 ~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l~~~  164 (397)
                      +||||++||+.|++||++|+|||+++++|++|.|+++||++.+|+++++++++++|+|+||||+|.+|+++|+|++|.++
T Consensus        97 ~IMtS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~  176 (405)
T 3oc9_A           97 FLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEK  176 (405)
T ss_dssp             EEEECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHH
T ss_pred             EEEeCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccCCCC
Q 015957          165 GIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETG  244 (397)
Q Consensus       165 G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~~~g  244 (397)
                      |++|+||+|+||+|++++||.|+|||++++++++++|++|+.|+|++|+||+.  +|+++||||+|+|++ ++.. ..+|
T Consensus       177 Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~--dg~~~vvEysei~~e-~e~~-~~~g  252 (405)
T 3oc9_A          177 GIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKE--QERIKVVEYTELTDE-LNKQ-LSNG  252 (405)
T ss_dssp             TCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGCCTT-TTCB-CTTS
T ss_pred             CCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEE--CCeeEEEEEeeCCHH-Hhhc-CCCC
Confidence            99999999999988999999999999999999999999999999999999997  799999999999999 5443 3578


Q ss_pred             ceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCC--------CcchhhhhHHHhhhcccCCceeEEEEec
Q 015957          245 RLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPSTALFEVLR  316 (397)
Q Consensus       245 ~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~--------~~~~~klE~fi~D~~~~~~~~~~~~v~R  316 (397)
                      .+.|+++|||+|+|+++||++++   +.+||||+|+|||||.|.        .+||+|||+||||+|++++++.+++|+|
T Consensus       253 ~l~fn~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~R  329 (405)
T 3oc9_A          253 EFIYNCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQR  329 (405)
T ss_dssp             CBSSCEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECCH
T ss_pred             ceeeccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEECh
Confidence            89999999999999999999988   357999999999999862        3799999999999999999999999999


Q ss_pred             CccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeecCCCCCCCcEEeCcccceeCCcchhhhcCcEecCCccc
Q 015957          317 EEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI  395 (397)
Q Consensus       317 ~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~eisp~~sy~gE~l~~~~~~~~~~~p~~~  395 (397)
                      ++||+||||++|.+.|||+|||++|+++|++|++++|+++.++.+   ..|||||++||+||||+. ++|++|+.|.++
T Consensus       330 ~~eF~PlKn~~g~~~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~---~~~Eispl~sy~ge~l~~-~~~~~~~~p~~~  404 (405)
T 3oc9_A          330 FIEFSALKNSLNESFDNVNTVKRDWYRLNIYYLKKAGAIVDDSKS---PICEISFRKSFEEEGLKE-FKGKTIQLPFIL  404 (405)
T ss_dssp             HHHCCBCCCCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEEECSSC---CCEEECTTTCSSSGGGGG-GTTCEEESCEEE
T ss_pred             HhcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEcCCCC---ccEEeCcccccCccCccc-cCCcEecCcccc
Confidence            999999999999999999999999999999999999999875432   369999999999999998 699999999875
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 Back     alignment and structure
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* Back     alignment and structure
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... Back     alignment and structure
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 Back     alignment and structure
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 Back     alignment and structure
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Back     alignment and structure
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} Back     alignment and structure
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} Back     alignment and structure
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* Back     alignment and structure
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A Back     alignment and structure
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} Back     alignment and structure
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Back     alignment and structure
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* Back     alignment and structure
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* Back     alignment and structure
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A Back     alignment and structure
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 Back     alignment and structure
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 Back     alignment and structure
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 Back     alignment and structure
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* Back     alignment and structure
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* Back     alignment and structure
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* Back     alignment and structure
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Back     alignment and structure
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} Back     alignment and structure
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} Back     alignment and structure
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A Back     alignment and structure
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} Back     alignment and structure
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 Back     alignment and structure
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A Back     alignment and structure
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} Back     alignment and structure
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 Back     alignment and structure
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* Back     alignment and structure
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* Back     alignment and structure
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} Back     alignment and structure
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} Back     alignment and structure
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 397
d1jv1a_501 c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor 1e-156
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 6e-96
d1w55a1205 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, 5e-05
d1w77a1226 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl- 3e-04
d2oi6a2248 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate 0.002
d1i52a_225 c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt 0.002
d2cu2a2268 c.68.1.20 (A:1-268) Putative mannose-1-phosphate g 0.003
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]

 Score =  447 bits (1150), Expect = e-156
 Identities = 189/416 (45%), Positives = 247/416 (59%), Gaps = 30/416 (7%)

Query: 2   DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 61
           D+ + W   GL  IS  K+AVLLL+GGQGTRLG + PKG  ++GLPS K+LFQ+QAERIL
Sbjct: 85  DQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERIL 144

Query: 62  CVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTI 121
            +Q++A +            I WYIMTS  T ++T+++F  HKYFGL+ + V FFQQG +
Sbjct: 145 KLQQVAEKYYGNKC-----IIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGML 199

Query: 122 PCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRV 181
           P +S DG+ I+E   KV+ APDGNGG+Y AL +  ++EDM  RGI  I  Y VDN LV+V
Sbjct: 200 PAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV 259

Query: 182 ADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQ 241
           ADP F+G+ I KG   GAKVV K  P E VGV  R    G   VVEYSE+  + A     
Sbjct: 260 ADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--VDGVYQVVEYSEISLATAQK-RS 316

Query: 242 ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIH--GQTV------GF 293
             GRL F   N+  H FT+ FL  V N  E    +H+A+KKIP +   GQ +      G 
Sbjct: 317 SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGI 376

Query: 294 KLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNF-DTPDSARLLVLRLHTRWVIAA 352
           K+E+F+FD F +A    ++EVLRE+EF+P+KNA+  N  D P +AR  ++ LH  WV+ A
Sbjct: 377 KMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNA 436

Query: 353 GGFLTHSVPLYATG-------------VEVSPLCSYAGENLEAICRGRTFHAPCEI 395
           GG                          E+SPL SYAGE LE+    + FHAP  I
Sbjct: 437 GGHFIDENGSRLPAIPRLKDANDVPIQCEISPLISYAGEGLESYVADKEFHAPLII 492
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Length = 205 Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 226 Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 248 Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Length = 225 Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Length = 268 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
d1jv1a_501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 100.0
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 100.0
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 99.5
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 99.46
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 99.27
d1g97a2250 N-acetylglucosamine 1-phosphate uridyltransferase 99.26
d2oi6a2248 N-acetylglucosamine 1-phosphate uridyltransferase 99.22
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 99.12
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 99.1
d1jyka_229 CTP:phosphocholine cytidylytransferase LicC {Strep 98.67
d1w77a1226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.64
d1tzfa_259 Glucose-1-phosphate cytidylyltransferase RfbF {Sal 98.62
d1i52a_225 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.58
d1vpaa_221 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.47
d1vgwa_226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 98.29
d1e5ka_188 Molybdenum cofactor biosynthesis protein MobA {Esc 98.04
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 97.94
d2dpwa1231 Uncharacterized protein TTHA0179 {Thermus thermoph 97.63
d1eyra_225 CMP acylneuraminate synthetase {Neisseria meningit 96.13
d1vh1a_246 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 95.64
d1qwja_228 CMP acylneuraminate synthetase {Mouse (Mus musculu 95.49
d1h7ea_245 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 94.8
d1vica_255 CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn 93.84
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]

Probab=100.00  E-value=8.6e-105  Score=819.07  Aligned_cols=387  Identities=48%  Similarity=0.787  Sum_probs=362.7

Q ss_pred             hHHHHHHHHhHhhccCCCEEEEEecCCCCCcCCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcc
Q 015957            2 DERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAA   81 (397)
Q Consensus         2 ~~~~~~~~~G~~~i~~gkvavviLaGG~GTRLg~~~PKg~~~i~l~~~ksll~~~~~~i~~l~~l~~~~~~~~~~~~~~~   81 (397)
                      ++.++|+++|+++|++||||||+||||+|||||+++|||++||++++++||||+++++|+++++++.++..     +++.
T Consensus        85 ~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~~~-----~~~~  159 (501)
T d1jv1a_          85 DQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG-----NKCI  159 (501)
T ss_dssp             GGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS-----SCCC
T ss_pred             HHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHhcC-----CCCC
Confidence            45689999999999999999999999999999999999999999999999999999999999999877652     5788


Q ss_pred             eeEEEecCccchHHHHHHHhhcCCCCCCCCcEEEEEcCCeeeeecCCcccccCCCccccccCCCchHhHHHhhCchHHHH
Q 015957           82 IHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM  161 (397)
Q Consensus        82 ipl~IMtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~i~~~P~G~Ggi~~~L~~sg~l~~l  161 (397)
                      |||+||||+.||++|++||++|+|||+++++|++|+|+++||++.+|+++++++++++|+|+||||+|.+|+++|++++|
T Consensus       160 iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG~ld~l  239 (501)
T d1jv1a_         160 IPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDM  239 (501)
T ss_dssp             CCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHH
T ss_pred             ceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceECCCCCcccCCCCcccccCCCchHHHHHHHHCCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCceEEEEEcCCCccccccccccchhhhccCCcEEEEEeecCCCCcccceEEEeCCCCceEEEEeccCChhhhhhccC
Q 015957          162 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQ  241 (397)
Q Consensus       162 ~~~G~eyv~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~kv~~k~~p~e~vGvl~~~~~~g~~~vvEy~el~~~~~~~~~~  241 (397)
                      .++|++|++|+||||+|++++||.|+|||+.+++++++||++|+.|+|++|++|+.  +|+++||||+|+|++.+++++ 
T Consensus       240 ~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~--dg~~~vvEysel~~~~~~~~~-  316 (501)
T d1jv1a_         240 EQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATAQKRS-  316 (501)
T ss_dssp             HHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHHHCBC-
T ss_pred             HHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE--CCeEEEEEeccCCHHHHhhcc-
Confidence            99999999999999999999999999999999999999999999999999999998  799999999999999988765 


Q ss_pred             CCCceeeeccceeeeEeehHHHHHHhhccccCccceeeccccCCCCC--------CcchhhhhHHHhhhcccCCceeEEE
Q 015957          242 ETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPSTALFE  313 (397)
Q Consensus       242 ~~g~~~f~~~Ni~~~~~~l~~L~~~~~~~~~~lp~h~a~kkip~~~~--------~~~~~klE~fi~D~~~~~~~~~~~~  313 (397)
                      ++|++.|+++|||+|||+++||+++++.....+|||+|+|||||.|.        .+||+|||+||||+|++++++.+++
T Consensus       317 ~~g~l~f~~~Ni~~~~fsl~fl~~~~~~~~~~l~~hva~Kki~~~d~~~~~~~p~~~n~iklE~fifD~~~~~~~~~~~~  396 (501)
T d1jv1a_         317 SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYE  396 (501)
T ss_dssp             TTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSSEEEEE
T ss_pred             CCCcccccccceeheeeEHHHHHHHHHhcccCCCceEeccccCccCCCCCcccCCCCcchhHHHHHHHHHHhccceEEEE
Confidence            58999999999999999999999999866668999999999998762        4789999999999999999999999


Q ss_pred             EecCccccccccCCCC-CCCCHHHHHHHHHHHHHHHHHHcCceeecCCC-------------CCCCcEEeCcccceeCCc
Q 015957          314 VLREEEFAPVKNANGS-NFDTPDSARLLVLRLHTRWVIAAGGFLTHSVP-------------LYATGVEVSPLCSYAGEN  379 (397)
Q Consensus       314 v~R~~~FsPvKn~~~~-~~dsp~ta~~~l~~~~~~~l~~~g~~~~~~~~-------------~~~~~~eisp~~sy~gE~  379 (397)
                      |+|++||+||||++|. +.|||+||+.+|+++|++||.++|+.+.++..             .....|||||++||.|||
T Consensus       397 V~R~~eFaPvKN~~~~~~~dsp~ta~~~l~~~~~~wl~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~EIsp~~sy~GEg  476 (501)
T d1jv1a_         397 VLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRLKDANDVPIQCEISPLISYAGEG  476 (501)
T ss_dssp             ECHHHHCCBCCSCTTSSSSSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCSSCCCCSTTCCCCCEEECTTTCSSSCS
T ss_pred             EchhhccccccCCCCCCCCCCHHHHHHHHHHHhHHHHHHcCCeEecccccccccccccccccCCCceEEECCcccccccC
Confidence            9999999999999885 57999999999999999999999998853210             112359999999999999


Q ss_pred             chhhhcCcEecCCcccc
Q 015957          380 LEAICRGRTFHAPCEIG  396 (397)
Q Consensus       380 l~~~~~~~~~~~p~~~~  396 (397)
                      |+.+++|++|+.|++|.
T Consensus       477 L~~~~~~~~~~~p~~l~  493 (501)
T d1jv1a_         477 LESYVADKEFHAPLIID  493 (501)
T ss_dssp             CHHHHTTCEECSSEEEE
T ss_pred             HHHhhCCCEecCceEEc
Confidence            99999999999999874
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]} Back     information, alignment and structure
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} Back     information, alignment and structure
>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure