Citrus Sinensis ID: 015981

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MKFAVKALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSIGGLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETPCGRRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATVYRKDATPIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRREHLAADVVSV
ccEEEEEcccccccEEEEECccccccccccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHcccccccccccccccccccccEEEEcccccccccccCEEccccccccccHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccccccccccccccccEEEccccccccccccccccccccccccEEECcccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccc
MKFAVKALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSIGGLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETPCGRRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATVYRKDATPIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRREH********
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MKFAVKALSSGKARAGVVHLGSCPSPIETPCLLLSTRKGLPIFISPDLLSSLPSPDSNLLQFSPLHFSEGPSPKTISSIGGLHQMVGLHEYGFAAVARDSIQCLPECGSTNKTGASFETPCGRRLIKPVEYMEMITSMKPNLWATLADEVPAWANNKRNKTSVDRTVKWLDECIARSPAGGAVFGSIVGGSNIEERKRCAQEVAVRNVSGYWIGGFGLGESMEERPSLLNAVTDNLPKDWPRMICGLGLPEEVLQGVAAGVDLFDSAYIYHLTIGGFALTFPLDRTEKNDYNYQLSDQGSDRTKINLRATVYRKDATPIVEDCCCYTCQNHTKAYINHLLNVHEMLAQILLEIHNTHHYLGFFRSIREAIKEGCFEQFQKKFVQSRREHLAADVVSV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Queuine tRNA-ribosyltransferase subunit qtrtd1 Interacts with qtrt1 to form an active queuine tRNA-ribosyltransferase. This enzyme exchanges queuine for the guanine at the wobble position of tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), thereby forming the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).probableQ28DX0
Queuine tRNA-ribosyltransferase subunit QTRTD1 Interacts with QTRT1 to form an active queuine tRNA-ribosyltransferase. This enzyme exchanges queuine for the guanine at the wobble position of tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), thereby forming the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).probableB8ZXI1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.2.-Pentosyltransferases.probable
2.4.2.29tRNA-guanine transglycosylase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ASH, chain A
Confidence level:very confident
Coverage over the Query: 1-281,302-387
View the alignment between query and template
View the model in PyMOL