Citrus Sinensis ID: 015989

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRASSVRGPSLSVRGGGVNMPSKTLAPCATPVELSTT
cHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccEEEEEEEcccccccccEEEccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccEEEEEEccccEEEEEEEccccccEEEEEcccccccccHHHHHHHHHcccccccEEEEEcccEEEEcEEccccccccHHcccccccccHHHHHcccccccccccEEEEEEEEEEEcccccEEEEEEcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccEEEEEEcccccccccccccccccEEEccccccccccccccccccccccc
cHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEHHHHHHHHHHHHHHccEccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccHcccccEEEEEEEEccEEEEEEcccccEEEEEccccccEEEEEEcccccccccHHHHHHHHHHcccccEEEEEEcccEEEEEEEEEEEccccHHcccccccccccHHHccccccccccEEcccccEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHccHHHHHHHHHccccccEEEEEEEEcccccccccccccccEEccccccccccccccccccccEcccc
MLSRLMNFLRAcwrpssdryvhtsadtagrqegllwykdngqhingEFSMAVVQANNlledqsqiesgplstlesgpygtfigiydghggpetsrYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVtkqwpmkpqiaavgscCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEmhsmhpddsqiVVLKHNVWRVKGLIQVSRSIGDVYLkkaeynreplyakfrlrepfrkpilssepsisahelqpfDQFLIFASDglwehlsnqdavdivqnhphsgsARRLVKAALQEAAKKREMRYSDLKkidrgvrrhfhdDITVIVVFLDSHlvsrassvrgpslsvrgggvnmpsktlapcatpvelstt
MLSRLMNFLRAcwrpssdryvhtsadtagrqEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGliqvsrsigdvylkkaeynreplyakfrlrepfrKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAkkremrysdlkkidrgvrrhfhDDITVIVVFLDSHLVsrassvrgpslsvrgggvnmpsktlapcatpvelstt
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRASSVRGPSLSVRGGGVNMPSKTLAPCATPVELSTT
****LMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLL***************SGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI***************QIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPIL*******AHELQPFDQFLIFASDGLWEHLSNQDAVDIV*****************************DLKKIDRGVRRHFHDDITVIVVFLDSHLVS************************************
***RLMNFLRAC**************************DNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVT**********AVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPH*****************KREMRYSDLKKIDRGVRRHFHDDITVIVVFL******************************************
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRASSVRGPSLSVRGGGVNMPSKTLAPCATPVELSTT
MLSRLMNFLRACWRPS*****************LLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSH***************************************
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SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRASSVRGPSLSVRGGGVNMPSKTLAPCATPVELSTT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
Q5Z8P0392 Probable protein phosphat yes no 0.982 0.994 0.805 0.0
Q9SD12379 Probable protein phosphat yes no 0.952 0.997 0.778 1e-178
Q10S32399 Probable protein phosphat no no 1.0 0.994 0.728 1e-178
Q5PNS9400 Probable protein phosphat no no 0.989 0.982 0.722 1e-177
Q9FKX4385 Probable protein phosphat no no 0.964 0.994 0.747 1e-174
Q7XCJ7393 Probable protein phosphat no no 0.984 0.994 0.695 1e-167
Q9LHJ9385 Probable protein phosphat no no 0.937 0.966 0.675 1e-153
Q94CL8384 Probable protein phosphat no no 0.911 0.942 0.653 1e-142
Q501F9370 Probable protein phosphat no no 0.914 0.981 0.601 1e-119
Q0V7V2384 Probable protein phosphat no no 0.919 0.950 0.530 1e-119
>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1 Back     alignment and function desciption
 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/390 (80%), Positives = 350/390 (89%)

Query: 1   MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
           M+  LMN LRACWRPSS+++    +D AGRQ+GLLWYKD GQH+NGEFSMAVVQANNLLE
Sbjct: 1   MIVTLMNLLRACWRPSSNQHARAGSDVAGRQDGLLWYKDTGQHVNGEFSMAVVQANNLLE 60

Query: 61  DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
           DQ QIESGPLS L+SGPYGTF+G+YDGHGGPET+ YINDHLF HLKRF SEQ S+S DV+
Sbjct: 61  DQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFHHLKRFASEQNSISADVL 120

Query: 121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
           KKAY+ATEDGFFS+VTKQWP+KPQIAAVGSCCLVGVI  G LY+AN+GDSR VLGR VKA
Sbjct: 121 KKAYEATEDGFFSVVTKQWPVKPQIAAVGSCCLVGVICGGILYVANVGDSRVVLGRHVKA 180

Query: 181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
           TGEVLA+QLS+EHNV IESVR+E+ SMHP+D  IVVLKHNVWRVKGLIQV RSIGD YLK
Sbjct: 181 TGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLK 240

Query: 241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
           ++E+NREPLYAKFRLREPF KPILSSEPSIS   LQP DQFLIFASDGLWEHL+NQ+AVD
Sbjct: 241 RSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVD 300

Query: 301 IVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLV 360
           IV + P +GSARRL+KAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDS LV
Sbjct: 301 IVHSSPRNGSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLV 360

Query: 361 SRASSVRGPSLSVRGGGVNMPSKTLAPCAT 390
           SRAS+ RGPS+S+RGGGVN+ S TLAP A+
Sbjct: 361 SRASTYRGPSVSLRGGGVNLRSNTLAPYAS 390

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function description
>sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1 Back     alignment and function description
>sp|Q94CL8|P2C48_ARATH Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1 Back     alignment and function description
>sp|Q501F9|P2C67_ARATH Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
224133996397 predicted protein [Populus trichocarpa] 1.0 1.0 0.879 0.0
255579574395 protein phosphatase 2c, putative [Ricinu 0.994 1.0 0.881 0.0
255560515397 protein phosphatase 2c, putative [Ricinu 1.0 1.0 0.851 0.0
224078369397 predicted protein [Populus trichocarpa] 0.989 0.989 0.857 0.0
359496811397 PREDICTED: LOW QUALITY PROTEIN: probable 1.0 1.0 0.833 0.0
224105139397 predicted protein [Populus trichocarpa] 0.989 0.989 0.839 0.0
4206122396 protein phosphatase 2C homolog [Mesembry 0.997 1.0 0.818 0.0
7768153397 protein phosphatase 2C (PP2C) [Fagus syl 1.0 1.0 0.816 0.0
356502653394 PREDICTED: probable protein phosphatase 0.989 0.997 0.826 0.0
225428074397 PREDICTED: probable protein phosphatase 1.0 1.0 0.816 0.0
>gi|224133996|ref|XP_002327730.1| predicted protein [Populus trichocarpa] gi|118486583|gb|ABK95130.1| unknown [Populus trichocarpa] gi|222836815|gb|EEE75208.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/397 (87%), Positives = 380/397 (95%)

Query: 1   MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
           MLSRL+NFLRACW PSSDRYVHT ++ AGRQ+GLLWYKD GQH+NGEFSMAVVQANNLLE
Sbjct: 1   MLSRLINFLRACWLPSSDRYVHTGSEAAGRQDGLLWYKDTGQHMNGEFSMAVVQANNLLE 60

Query: 61  DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
           DQSQIESGPLSTL+SGPYGTF+GIYDGHGGPETSRY+NDHLFQHLKRFTSEQQSMSVDVI
Sbjct: 61  DQSQIESGPLSTLDSGPYGTFVGIYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVI 120

Query: 121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
           +KAYQATE+GF SLVTKQWPMKPQIAAVGSCCLV VI  G LYIANLGDSRAVLGRLVKA
Sbjct: 121 RKAYQATEEGFLSLVTKQWPMKPQIAAVGSCCLVAVICGGILYIANLGDSRAVLGRLVKA 180

Query: 181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
           TGEVLAIQLSSEHNV IESVRQEMHS+HPDDSQIVVLKHNVWRVKGLIQ+SRSIGDVYLK
Sbjct: 181 TGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLK 240

Query: 241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
           KAE+NR PLYAKFRLREPF++PILSSEPSIS HELQP DQFLIFASDGLWEHLSNQ+AVD
Sbjct: 241 KAEFNRAPLYAKFRLREPFKRPILSSEPSISVHELQPHDQFLIFASDGLWEHLSNQEAVD 300

Query: 301 IVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLV 360
           IVQNHP +G ARRL+KAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITV VVFLD++LV
Sbjct: 301 IVQNHPRNGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVAVVFLDANLV 360

Query: 361 SRASSVRGPSLSVRGGGVNMPSKTLAPCATPVELSTT 397
           SRAS+V+GPS+SVRGGG+++P+KTL PCATP+E+++T
Sbjct: 361 SRASTVKGPSVSVRGGGIHLPAKTLVPCATPMEINST 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255579574|ref|XP_002530628.1| protein phosphatase 2c, putative [Ricinus communis] gi|223529801|gb|EEF31736.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255560515|ref|XP_002521272.1| protein phosphatase 2c, putative [Ricinus communis] gi|223539540|gb|EEF41128.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224078369|ref|XP_002305529.1| predicted protein [Populus trichocarpa] gi|222848493|gb|EEE86040.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359496811|ref|XP_003635344.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 60-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224105139|ref|XP_002313699.1| predicted protein [Populus trichocarpa] gi|118485969|gb|ABK94829.1| unknown [Populus trichocarpa] gi|222850107|gb|EEE87654.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|4206122|gb|AAD11430.1| protein phosphatase 2C homolog [Mesembryanthemum crystallinum] Back     alignment and taxonomy information
>gi|7768153|emb|CAB90634.1| protein phosphatase 2C (PP2C) [Fagus sylvatica] Back     alignment and taxonomy information
>gi|356502653|ref|XP_003520132.1| PREDICTED: probable protein phosphatase 2C 60-like [Glycine max] Back     alignment and taxonomy information
>gi|225428074|ref|XP_002279993.1| PREDICTED: probable protein phosphatase 2C 60 isoform 1 [Vitis vinifera] gi|359475009|ref|XP_003631567.1| PREDICTED: probable protein phosphatase 2C 60 isoform 2 [Vitis vinifera] gi|297744584|emb|CBI37846.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.952 0.997 0.778 1.7e-162
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.964 0.994 0.747 2.8e-160
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.989 0.982 0.722 1.8e-158
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.937 0.966 0.675 4e-138
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.911 0.942 0.653 6.6e-129
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.911 0.978 0.603 1e-114
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.861 0.890 0.569 4.3e-109
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.894 0.934 0.545 4.9e-101
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.906 0.916 0.526 6.2e-101
TAIR|locus:2041444856 POL "poltergeist" [Arabidopsis 0.425 0.197 0.365 1.5e-36
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1582 (562.0 bits), Expect = 1.7e-162, P = 1.7e-162
 Identities = 298/383 (77%), Positives = 341/383 (89%)

Query:     1 MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
             MLS LM  L AC  PSS      S+D+ G+Q+GLLWYKD GQH+ GEFSMAVVQANNLLE
Sbjct:     1 MLSTLMKLLSACLWPSSSS--GKSSDSTGKQDGLLWYKDFGQHLVGEFSMAVVQANNLLE 58

Query:    61 DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
             DQSQ+ESGPLSTL+SGPYGTFIGIYDGHGGPETSR++NDHLFQHLKRF +EQ SMSVDVI
Sbjct:    59 DQSQVESGPLSTLDSGPYGTFIGIYDGHGGPETSRFVNDHLFQHLKRFAAEQASMSVDVI 118

Query:   121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
             KKAY+ATE+GF  +VTKQWP KPQIAAVGSCCLVGVI  G LYIAN+GDSRAVLGR +KA
Sbjct:   119 KKAYEATEEGFLGVVTKQWPTKPQIAAVGSCCLVGVICGGMLYIANVGDSRAVLGRAMKA 178

Query:   181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
             TGEV+A+QLS+EHNV IESVRQEMHS+HPDDS IV+LKHNVWRVKGLIQ+SRSIGDVYLK
Sbjct:   179 TGEVIALQLSAEHNVSIESVRQEMHSLHPDDSHIVMLKHNVWRVKGLIQISRSIGDVYLK 238

Query:   241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
             KAE+N+EPLY K+R+REPF++PILS EP+I+ HE+QP D+FLIFASDGLWE +SNQ+AVD
Sbjct:   239 KAEFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVD 298

Query:   301 IVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLV 360
             IVQNHP +G ARRLVK ALQEAAKKREMRYSDLKKI+RGVRRHFHDDITV+++FLD++ V
Sbjct:   299 IVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDITVVIIFLDTNQV 358

Query:   361 SRASSVRGPSLSVRGGGVNMPSK 383
             S   SV+GP LS+RGGG+  P K
Sbjct:   359 S---SVKGPPLSIRGGGMTFPKK 378
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FKX4P2C79_ARATH3, ., 1, ., 3, ., 1, 60.74730.96470.9948nono
Q5PNS9P2C64_ARATH3, ., 1, ., 3, ., 1, 60.72260.98990.9825nono
Q5MFV5P2C34_ORYSI3, ., 1, ., 3, ., 1, 60.53090.83370.8710N/Ano
Q9SD12P2C46_ARATH3, ., 1, ., 3, ., 1, 60.77800.95210.9973yesno
Q5Z8P0P2C60_ORYSJ3, ., 1, ., 3, ., 1, 60.80510.98230.9948yesno
Q10S32P2C28_ORYSJ3, ., 1, ., 3, ., 1, 60.72861.00.9949nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-59
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-59
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 7e-39
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 4e-21
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-17
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-08
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  193 bits (492), Expect = 1e-59
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 65/287 (22%)

Query: 70  LSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKR---FTSEQQSMSVDVIKKAYQA 126
           + T +    G F G++DGHGG E +++++ +L + L        ++     + ++KA+ +
Sbjct: 28  VITPDLSDSGGFFGVFDGHGGSEAAKFLSKNLPEILAEELIKEKDELEDVEEALRKAFLS 87

Query: 127 TEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLA 186
           T++           ++   A  GS  +V +IS   LY+AN+GDSRAVL R  KA      
Sbjct: 88  TDEEI---------LEELEALSGSTAVVALISGNKLYVANVGDSRAVLCRNGKA------ 132

Query: 187 IQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNR 246
           +QL+ +H    E  R  + +                RV G++ +SR+IGD +LK      
Sbjct: 133 VQLTEDHKPSNEDERARIEAAGGFVIN--------GRVNGVLALSRAIGDFFLK------ 178

Query: 247 EPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHP 306
                          P +S+EP ++  EL   D FLI ASDGLW+ LSNQ+ VDIV+ H 
Sbjct: 179 ---------------PYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHL 223

Query: 307 HSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVV 353
                        +EAAK         + ID  + R   D+ITV+VV
Sbjct: 224 SK---------DPKEAAK---------RLIDLALARGSKDNITVVVV 252

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.84
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.76
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.71
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.48
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.37
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.15
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-63  Score=473.50  Aligned_cols=331  Identities=50%  Similarity=0.818  Sum_probs=296.2

Q ss_pred             ChHHHHHHHHhccCcCcccccCc--CCCcC-CCCCceeEeecCCCccccceeeeeeccCCcCcchhhcccCCCCCCCC-C
Q 015989            1 MLSRLMNFLRACWRPSSDRYVHT--SADTA-GRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLES-G   76 (397)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~-~   76 (397)
                      |++.++++.+.||+|........  +++.. .+.+++.|+++...+..|+++++..+.++.++|..-++.+....... +
T Consensus        17 ~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~   96 (390)
T KOG0700|consen   17 MKSTPMRLKRSCLRPIRRGESSSRSGSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEE   96 (390)
T ss_pred             hccccchhhhhccCCCccccccccccccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeecc
Confidence            67889999999999988764432  23333 37899999999999999999999999988778877665555443333 6


Q ss_pred             CceEEEEEecCCChhHHHHHHHHHHHHHHHH------------hhhh--------------------c-ccchHHHHHHH
Q 015989           77 PYGTFIGIYDGHGGPETSRYINDHLFQHLKR------------FTSE--------------------Q-QSMSVDVIKKA  123 (397)
Q Consensus        77 ~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~------------~~~~--------------------~-~~~~~~~l~~a  123 (397)
                      +++.|+||||||||.++++|++++|+.++..            +..+                    . .....++|.+|
T Consensus        97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A  176 (390)
T KOG0700|consen   97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA  176 (390)
T ss_pred             CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence            7889999999999999999999999999883            2222                    1 35678899999


Q ss_pred             HHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHH
Q 015989          124 YQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE  203 (397)
Q Consensus       124 ~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~r  203 (397)
                      |.+++++|.+.+.+.+...|++..+||||+|+++.++.|||||+|||||+|++..+..+...++|||.||+.+++.|++|
T Consensus       177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R  256 (390)
T KOG0700|consen  177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR  256 (390)
T ss_pred             HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998754444469999999999999999999


Q ss_pred             HHhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEccCCCeEEE
Q 015989          204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLI  283 (397)
Q Consensus       204 i~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLI  283 (397)
                      |+..||+++.+++.++  |||+|.|++||||||.+||++.++.+|++..|.+|.++++||++++|+|+.++|.+.|+|||
T Consensus       257 ir~eHPdd~~~vv~~~--~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLI  334 (390)
T KOG0700|consen  257 IRSEHPDDPHIVVNKH--WRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLI  334 (390)
T ss_pred             HHHhCCCCcceEeecc--ceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEE
Confidence            9999999999999887  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhhh
Q 015989          284 FASDGLWEHLSNQDAVDIVQN-----HPHSGSARRLVKAALQEAAKKREMRYSDL  333 (397)
Q Consensus       284 LaSDGlwd~ls~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l  333 (397)
                      ||||||||+|++||++++|..     .+.+++|++||+.|+..++++++|+|++|
T Consensus       335 lASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~r~s~l  389 (390)
T KOG0700|consen  335 LASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGMRLSDL  389 (390)
T ss_pred             EeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccccHhhc
Confidence            999999999999999999998     67789999999999999999999988765

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-19
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 5e-19
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-18
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-18
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-17
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-15
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-14
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-14
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-14
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-14
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-14
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-11
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 7e-11
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 7e-11
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-09
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-07
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 7e-07
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 2e-05
2j4o_A401 Structure Of Tab1 Length = 401 3e-04
2pom_A372 Tab1 With Manganese Ion Length = 372 4e-04
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 120/268 (44%), Gaps = 54/268 (20%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
           ++A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + 
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNEREVER 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA--------EYNREPL----YA 251
           +   HP +    V+K +  R+ GL+   R+ GDV  K +        E   + L    Y 
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 252 KFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV--------- 302
           KF     +  P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV         
Sbjct: 312 KFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHH 371
Query: 303 --------------QNH--------------PHSGSARRLVKAAL--QEAAKKREMRYSD 332
                         Q H                  +A  L++ A+   E       R S 
Sbjct: 372 QQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSK 431
Query: 333 LKKIDRGVRRHFHDDITVIVVFLDSHLV 360
           +  +   + R + DDIT+IVV  +SH+V
Sbjct: 432 MLSLPEELARMYRDDITIIVVQFNSHVV 459
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-85
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-06
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-82
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 4e-52
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 6e-52
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-50
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-49
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-49
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 7e-49
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-48
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 5e-48
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 6e-47
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 8e-39
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-31
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-08
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 4e-08
1txo_A237 Putative bacterial enzyme; serine/threonine protei 6e-08
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 4e-07
3rnr_A211 Stage II sporulation E family protein; structural 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  266 bits (681), Expect = 2e-85
 Identities = 88/387 (22%), Positives = 151/387 (39%), Gaps = 69/387 (17%)

Query: 41  GQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDH 100
            + +    +++++    LLE ++ +ESG        P   +    + +   E S+   + 
Sbjct: 85  SERLFYYIAVSLLPHETLLEIENAVESGRALL----PILQWHKHPNDYFSKEASKLYFNG 140

Query: 101 LFQHLKRFTSEQQSMSVDVIKKAY-----------QATEDGFFSLVTKQWPMKPQIAAVG 149
           L  + +         S D+  K              + E       +    +  ++A  G
Sbjct: 141 LRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSG 200

Query: 150 SCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHP 209
           +   V  +    L++AN GDSRA+LG   +  G   A+ LS++HN   E   Q +   HP
Sbjct: 201 ATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHP 259

Query: 210 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK------------KAEYNREPLYAKFRLRE 257
            +    V+K +  R+ GL+   R+ GDV  K              +   +  Y KF    
Sbjct: 260 KNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPN 317

Query: 258 PFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH------------ 305
               P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV  +            
Sbjct: 318 YHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAV 377

Query: 306 -------------------------PHSGSARRLVKAAL--QEAAKKREMRYSDLKKIDR 338
                                        +A  L++ A+   E       R S +  +  
Sbjct: 378 GGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPE 437

Query: 339 GVRRHFHDDITVIVVFLDSHLVSRASS 365
            + R + DDIT+IVV  +SH+V    +
Sbjct: 438 ELARMYRDDITIIVVQFNSHVVGAYQN 464
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.78
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.76
3f79_A255 Probable two-component response regulator; adaptor 99.62
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.54
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.02
3eq2_A394 Probable two-component response regulator; adaptor 98.11
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=2e-51  Score=415.96  Aligned_cols=308  Identities=29%  Similarity=0.440  Sum_probs=219.1

Q ss_pred             cceeeeeeccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhh------hh--------
Q 015989           46 GEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFT------SE--------  111 (397)
Q Consensus        46 ~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~------~~--------  111 (397)
                      -.|.....+.|..|||++.+...      ..++..||||||||||+.+|++|+++|+.+|...+      .+        
T Consensus        39 ~~~~s~~g~~R~~nED~~~v~~~------~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~  112 (467)
T 2pnq_A           39 LGFDSNRLPANAPIEDRRSATTC------LQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESG  112 (467)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEEE------SSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC--
T ss_pred             EEEEeeccCCCCCCCCceeeeec------cCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcc
Confidence            34666777889999999876321      11346899999999999999999999999886431      00        


Q ss_pred             --------------------------------------------cccchHHHHHHHHHHHHHHHHHHHhhhCC------C
Q 015989          112 --------------------------------------------QQSMSVDVIKKAYQATEDGFFSLVTKQWP------M  141 (397)
Q Consensus       112 --------------------------------------------~~~~~~~~l~~a~~~~~~~l~~~~~~~~~------~  141 (397)
                                                                  ....+.++|+++|.++|+.|.+.......      .
T Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~  192 (467)
T 2pnq_A          113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYL  192 (467)
T ss_dssp             --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred             ccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Confidence                                                        01156789999999999999876532100      0


Q ss_pred             CCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCCCCHHHHHHHHhcCCCCCCeEEEeCCe
Q 015989          142 KPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNV  221 (397)
Q Consensus       142 ~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~~~~~e~~ri~~~~~~~~~~~~~~~~~  221 (397)
                      .+....+|||+++++|.++++|||||||||+|+++. ..++.+.+++||.||++.++.|++||.+.|+.........+  
T Consensus       193 ~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~-~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--  269 (467)
T 2pnq_A          193 VLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--  269 (467)
T ss_dssp             HHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEE-CTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS--
T ss_pred             cccCCCCcceEEEEEEECCEEEEEECCCceEEEEEe-cCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec--
Confidence            112356999999999999999999999999999996 22334589999999999999999999999875432111222  


Q ss_pred             eeecCcccccccccccccccccc----------CC--chhhhhhccCCCCCCCccccCCceeEEEccCCCeEEEEEcCCC
Q 015989          222 WRVKGLIQVSRSIGDVYLKKAEY----------NR--EPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGL  289 (397)
Q Consensus       222 ~rv~G~l~vtRalGd~~~K~~~~----------~~--~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l~~~D~fLILaSDGl  289 (397)
                      .|++|.|++||||||..||....          ..  ...+.++.+|....+|+|+++|+|+.++|.++|.|||||||||
T Consensus       270 ~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGL  349 (467)
T 2pnq_A          270 DRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGL  349 (467)
T ss_dssp             SSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHH
T ss_pred             CccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCc
Confidence            39999999999999999986421          00  0011344456667789999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHcC-------CC------------------------------chHHHHHHHHHHHHH--HHhhhhhh
Q 015989          290 WEHLSNQDAVDIVQNH-------PH------------------------------SGSARRLVKAALQEA--AKKREMRY  330 (397)
Q Consensus       290 wd~ls~~ei~~iv~~~-------~~------------------------------~~~a~~Lv~~Al~~~--a~~~~~~~  330 (397)
                      ||+|+++|++++|...       .+                              +++|..|++.|+..+  ..-+..++
T Consensus       350 wd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~  429 (467)
T 2pnq_A          350 WETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERL  429 (467)
T ss_dssp             HTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC------------
T ss_pred             cccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHH
Confidence            9999999999999763       12                              567899999999876  21233455


Q ss_pred             hhhhccccccCCccCCceEEEEEEcCCccccc
Q 015989          331 SDLKKIDRGVRRHFHDDITVIVVFLDSHLVSR  362 (397)
Q Consensus       331 ~~l~~~~~~~~r~~~DNiTvivv~l~~~~~~~  362 (397)
                      ++|+.++++++|+++||||||||+|+.+.+.+
T Consensus       430 ~~ll~~~~~~~R~~~DdITViVv~~~~~~~~~  461 (467)
T 2pnq_A          430 SKMLSLPEELARMYRDDITIIVVQFNSHVVGA  461 (467)
T ss_dssp             -------------CCSCEEEEEEEECHHHHHH
T ss_pred             HhhhcCCccccccCCCCcEEEEEEeCchHhhh
Confidence            77899999999999999999999998776543
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 397
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-31
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 3e-17
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 2e-31
 Identities = 58/281 (20%), Positives = 106/281 (37%), Gaps = 46/281 (16%)

Query: 81  FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
           F  +YDGH G + ++Y  +HL  H+      + S     ++        GF  +      
Sbjct: 54  FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 113

Query: 141 M---KPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI 197
           M   K      GS  +  +IS    Y  N GDSR +L R  K          + +H    
Sbjct: 114 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV------HFFTQDHKPSN 167

Query: 198 ESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLRE 257
              ++ + +              + RV G + VSR++GD   K                 
Sbjct: 168 PLEKERIQNAGG--------SVMIQRVNGSLAVSRALGDFDYKCVHGK------------ 207

Query: 258 PFRKPILSSEPSISAHEL-QPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVK 316
              + ++S EP +   E  +  DQF+I A DG+W+ + N++  D V++            
Sbjct: 208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD------ 261

Query: 317 AALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDS 357
             L++   +          +D  + +   D+++VI++   +
Sbjct: 262 -DLEKVCNEV---------VDTCLYKGSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-50  Score=383.30  Aligned_cols=260  Identities=23%  Similarity=0.353  Sum_probs=209.7

Q ss_pred             ccccceeeeeeccCCcCcchhhcccCCCCCCCCCCceEEEEEecCCChhHHHHHHHHHHHHHHHHhhhhcc-------cc
Q 015989           43 HINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQ-------SM  115 (397)
Q Consensus        43 ~~~~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~-------~~  115 (397)
                      ..+|..++.  +.|+.|||++.+....   ....++..||||||||||+.+|++|+++|+..|.+......       ..
T Consensus        21 ~~~g~~s~~--G~R~~~ED~~~~~~~~---~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~   95 (295)
T d1a6qa2          21 LRYGLSSMQ--GWRVEMEDAHTAVIGL---PSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVEN   95 (295)
T ss_dssp             EEEEEEEEE--ETSSSCCEEEEEEEEE---TTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHH
T ss_pred             eEEEEEeCc--cCCCcccCeeEEEccc---CCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHH
Confidence            334444443  4577899998773221   12334578999999999999999999999999876443321       34


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccccceEEEEEEeCCeEEEEEcCCceEEEEeeeccCCcEEEEEccCCCCC
Q 015989          116 SVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNV  195 (397)
Q Consensus       116 ~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSRa~l~r~~~~~~~~~~~~LT~DH~~  195 (397)
                      +.++|+++|.++++.+.......    .....+|||+++++|.++++|||||||||+|++++      +.+++||.||++
T Consensus        96 ~~~al~~a~~~~~~~~~~~~~~~----~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~------~~~~~lT~dH~~  165 (295)
T d1a6qa2          96 VKNGIRTGFLEIDEHMRVMSEKK----HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN------RKVHFFTQDHKP  165 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----TCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET------TEEEEECCCCCT
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhc----cCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec------ccceeeccccCc
Confidence            56789999999999887665442    23367999999999999999999999999999997      899999999999


Q ss_pred             CCHHHHHHHHhcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceeEEEc
Q 015989          196 GIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHEL  275 (397)
Q Consensus       196 ~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~K~~~~~~~~~~~~~~~~~~~~~~~v~~~Pdi~~~~l  275 (397)
                      .++.|++||.+.|+.    +.    ..|++|.|++||||||..+|..+..            ...+++|+++|+|..+++
T Consensus       166 ~~~~E~~Ri~~~gg~----v~----~~r~~g~l~~tRa~Gd~~~k~~~~~------------~~~~~~v~~~Pdi~~~~~  225 (295)
T d1a6qa2         166 SNPLEKERIQNAGGS----VM----IQRVNGSLAVSRALGDFDYKCVHGK------------GPTEQLVSPEPEVHDIER  225 (295)
T ss_dssp             TSHHHHHHHHHTTCC----EE----TTEETTTBSCSBCEECGGGSCCTTC------------CGGGSSSBCCCEEEEEEC
T ss_pred             ccHHHHhhHhhcCCc----cc----ccccCCceeeeeccCcHHhhhcccc------------CcccccccccccceEEEe
Confidence            999999999998742    21    2389999999999999999876422            234578999999999998


Q ss_pred             c-CCCeEEEEEcCCCCCCCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceE
Q 015989          276 Q-PFDQFLIFASDGLWEHLSNQDAVDIVQN-----HPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT  349 (397)
Q Consensus       276 ~-~~D~fLILaSDGlwd~ls~~ei~~iv~~-----~~~~~~a~~Lv~~Al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiT  349 (397)
                      . ++|.|||||||||||+|+++|++++|+.     ..++.+|++|++.|+..+                     +.||||
T Consensus       226 ~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g---------------------s~DNiT  284 (295)
T d1a6qa2         226 SEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG---------------------SRDNMS  284 (295)
T ss_dssp             CTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT---------------------CCSCEE
T ss_pred             ecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcC---------------------CCCCeE
Confidence            6 5678999999999999999999999975     345678889988887543                     799999


Q ss_pred             EEEEEcCCc
Q 015989          350 VIVVFLDSH  358 (397)
Q Consensus       350 vivv~l~~~  358 (397)
                      ||||+|+..
T Consensus       285 vivv~~~~~  293 (295)
T d1a6qa2         285 VILICFPNA  293 (295)
T ss_dssp             EEEEECTTS
T ss_pred             EEEEeccCC
Confidence            999999864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure