Citrus Sinensis ID: 016015

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
cccccccHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHcHHHHHHHHcccccccccccEEcccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccEEEEcccccccccEEccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHcccccEEEEcccccccccccEEccccccHHHHcccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHccHHccHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHcccHHHEEEcccHHHHEEEccccEEEccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
mkvcfnsagkvtmidqvqhpsVMQKVAGQLLHSSLSqniqdyerptmyqrrgaygnysnaafqypivsaattdlsmvpstASAICvqapaekgfaGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEmiksgrlsepykgigdCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFagnlgsggaagASSLLFVYSLDYARTRLANDAKAakkggerqfNGLVDVYRKTMksdgiaglyrgfNISCVGIIVYRGLYfgmydslkpvvltgklqdsfFASFALGWLItngaglasypiDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGkkygsgga
MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDemiksgrlsepykGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDakaakkggerqfnglVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGkkygsgga
MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNlgsggaagassllFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRavagagvlagYDKLQLIVFGKKYGSGGA
*********KVTMIDQV********VAGQLLH******IQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAA**GGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKY*****
MKVCFNSAGKVTMIDQVQHPSV************LSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPS*****************FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD***********YKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAA****ERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYG****
MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKK******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MKVCFNSAGKVTMIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
O22342386 ADP,ATP carrier protein 1 N/A no 0.962 0.989 0.894 0.0
P40941385 ADP,ATP carrier protein 2 yes no 0.957 0.987 0.833 0.0
P25083386 ADP,ATP carrier protein, N/A no 0.962 0.989 0.830 1e-179
P31167381 ADP,ATP carrier protein 1 no no 0.954 0.994 0.837 1e-179
P27081386 ADP,ATP carrier protein, N/A no 0.947 0.974 0.828 1e-173
P04709387 ADP,ATP carrier protein 1 N/A no 0.964 0.989 0.786 1e-167
P12857387 ADP,ATP carrier protein 2 N/A no 0.964 0.989 0.784 1e-166
P31691382 ADP,ATP carrier protein, yes no 0.952 0.989 0.784 1e-165
O49447379 ADP,ATP carrier protein 3 no no 0.949 0.994 0.776 1e-159
Q41629331 ADP,ATP carrier protein 1 N/A no 0.816 0.978 0.864 1e-156
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/388 (89%), Positives = 361/388 (93%), Gaps = 6/388 (1%)

Query: 14  IDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVSA 69
           +DQVQHPSVMQKVAGQL  SS SQ+ Q Y      P +YQRR AYGNYSNAA Q+P+   
Sbjct: 1   MDQVQHPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPV--R 58

Query: 70  ATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD 129
           A  DLSMVPSTASAICVQAPAEKGF+ FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD
Sbjct: 59  AFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD 118

Query: 130 EMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLF 189
           EMIKSGRLSEPYKGIGDCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLF
Sbjct: 119 EMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLF 178

Query: 190 NFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV 249
           NFKKDRDGYWKWFAGNL SGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV
Sbjct: 179 NFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV 238

Query: 250 DVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALG 309
           DVYRKT+KSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPV+LTG +QDSFFASF LG
Sbjct: 239 DVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLG 298

Query: 310 WLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILR 369
           WLITNGA LASYPIDTVRRRMMMTSG+AVKYKSSLDAFSQILKNEG KSLFKGAG+NILR
Sbjct: 299 WLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILR 358

Query: 370 AVAGAGVLAGYDKLQLIVFGKKYGSGGA 397
           A+AGAGVLAGYDKLQLIVFGKKYGSGGA
Sbjct: 359 AIAGAGVLAGYDKLQLIVFGKKYGSGGA 386

Gossypium hirsutum (taxid: 3635)
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=AAC2 PE=1 SV=2 Back     alignment and function description
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1 Back     alignment and function description
>sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=AAC1 PE=1 SV=2 Back     alignment and function description
>sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3 Back     alignment and function description
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2 Back     alignment and function description
>sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1 Back     alignment and function description
>sp|O49447|ADT3_ARATH ADP,ATP carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=AAC3 PE=1 SV=1 Back     alignment and function description
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
255582238385 ADP,ATP carrier protein, putative [Ricin 0.959 0.989 0.902 0.0
3334115386 RecName: Full=ADP,ATP carrier protein 1, 0.962 0.989 0.894 0.0
224059642389 predicted protein [Populus trichocarpa] 0.967 0.987 0.884 0.0
225435480393 PREDICTED: ADP,ATP carrier protein, mito 0.969 0.979 0.847 0.0
2780194388 adenine nucleotide translocator [Lupinus 0.959 0.981 0.857 0.0
225450149385 PREDICTED: ADP,ATP carrier protein 1, mi 0.959 0.989 0.866 0.0
224057451385 predicted protein [Populus trichocarpa] 0.964 0.994 0.852 0.0
307135851390 adenine nucleotide translocator [Cucumis 0.964 0.982 0.867 0.0
449450237390 PREDICTED: ADP,ATP carrier protein 1, mi 0.964 0.982 0.859 0.0
356525661388 PREDICTED: ADP,ATP carrier protein 1, mi 0.962 0.984 0.856 0.0
>gi|255582238|ref|XP_002531911.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223528451|gb|EEF30484.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/389 (90%), Positives = 368/389 (94%), Gaps = 8/389 (2%)

Query: 13  MIDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVS 68
           M DQVQ+PSVMQKVAGQ LHSSLSQ+ Q +    +RP +YQRR AYGNY+NAAFQYP+  
Sbjct: 1   MADQVQYPSVMQKVAGQYLHSSLSQDFQGFDGSLQRPALYQRR-AYGNYTNAAFQYPMGC 59

Query: 69  AATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 128
           A   DLS+VP+TAS++CVQAP+EKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ
Sbjct: 60  A---DLSVVPTTASSVCVQAPSEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 116

Query: 129 DEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRL 188
           DEMIKSGRLSEPYKGIGDCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRL
Sbjct: 117 DEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRL 176

Query: 189 FNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL 248
           FNFKKD+DGYWKWFAGNL SGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL
Sbjct: 177 FNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL 236

Query: 249 VDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFAL 308
           VDVYRKT+ SDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTG LQDSFFASFAL
Sbjct: 237 VDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGNLQDSFFASFAL 296

Query: 309 GWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANIL 368
           GWLITNGAGLASYPIDTVRRRMMMTSGEAVKY+ SLDAFSQILKNEGAKSLFKGAGANIL
Sbjct: 297 GWLITNGAGLASYPIDTVRRRMMMTSGEAVKYRGSLDAFSQILKNEGAKSLFKGAGANIL 356

Query: 369 RAVAGAGVLAGYDKLQLIVFGKKYGSGGA 397
           RAVAGAGVLAGYDKLQLIVFGKKYGSGGA
Sbjct: 357 RAVAGAGVLAGYDKLQLIVFGKKYGSGGA 385

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|3334115|sp|O22342.1|ADT1_GOSHI RecName: Full=ADP,ATP carrier protein 1, mitochondrial; AltName: Full=ADP/ATP translocase 1; AltName: Full=Adenine nucleotide translocator 1; Short=ANT 1; Flags: Precursor gi|2463664|gb|AAB72047.1| adenine nucleotide translocator 1 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224059642|ref|XP_002299948.1| predicted protein [Populus trichocarpa] gi|222847206|gb|EEE84753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225435480|ref|XP_002285503.1| PREDICTED: ADP,ATP carrier protein, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|2780194|emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus] Back     alignment and taxonomy information
>gi|225450149|ref|XP_002279748.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224057451|ref|XP_002299232.1| predicted protein [Populus trichocarpa] gi|222846490|gb|EEE84037.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|307135851|gb|ADN33720.1| adenine nucleotide translocator [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|449450237|ref|XP_004142870.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356525661|ref|XP_003531442.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:2077778381 AAC1 "ADP/ATP carrier 1" [Arab 0.954 0.994 0.793 1.3e-162
TAIR|locus:2185041385 AAC2 "ADP/ATP carrier 2" [Arab 0.957 0.987 0.776 2.5e-161
TAIR|locus:2121363379 AAC3 "ADP/ATP carrier 3" [Arab 0.949 0.994 0.718 3e-140
UNIPROTKB|G4MKR0315 MGG_16149 "ADP,ATP carrier pro 0.763 0.961 0.714 5.6e-116
POMBASE|SPBC530.10c322 anc1 "mitochondrial adenine nu 0.745 0.919 0.716 5e-115
ASPGD|ASPL0000018215311 AN4064 [Emericella nidulans (t 0.755 0.964 0.713 1.3e-114
CGD|CAL0003655301 PET9 [Candida albicans (taxid: 0.748 0.986 0.694 1.8e-110
UNIPROTKB|Q5A516301 PET9 "Potential mitochondrial 0.748 0.986 0.694 1.8e-110
SGD|S000000126318 PET9 "Major ADP/ATP carrier of 0.765 0.955 0.668 6.3e-108
SGD|S000000289307 AAC3 "Mitochondrial inner memb 0.770 0.996 0.657 1.3e-107
TAIR|locus:2077778 AAC1 "ADP/ATP carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
 Identities = 307/387 (79%), Positives = 332/387 (85%)

Query:    13 MIDQVQHPSVMQKVAGQLLHSSLSQNIQ-DYERPTMYQRRGAYGNYSNAAFQYPIVSAAT 71
             M+DQVQHP++ QK AGQ + SS+S+++Q  Y+RP+MYQR   YGNYSNAAFQ+P  S   
Sbjct:     1 MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSR-- 58

Query:    72 TDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM 131
                 M+ +TAS + VQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM
Sbjct:    59 ----MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM 114

Query:   132 IKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 191
             IK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNF
Sbjct:   115 IKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 174

Query:   192 KKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGE-RQFNGLVD 250
             KKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKKGG  RQF+GLVD
Sbjct:   175 KKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVD 234

Query:   251 VYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGW 310
             VYRKT+K+DGIAGLYRGFNISCVGIIVYRGLYFG+YDS+KPV+LTG LQDSFFASFALGW
Sbjct:   235 VYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGW 294

Query:   311 LITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRX 370
             +ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILKNEGAKSLFKGAGANILR 
Sbjct:   295 VITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRA 354

Query:   371 XXXXXXXXXYDKLQLIVFGKKYGSGGA 397
                      YDKLQLIVFGKKYGSGGA
Sbjct:   355 VAGAGVLSGYDKLQLIVFGKKYGSGGA 381
GO:0005215 "transporter activity" evidence=IEA
GO:0005471 "ATP:ADP antiporter activity" evidence=ISS;IDA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005740 "mitochondrial envelope" evidence=TAS
GO:0015865 "purine nucleotide transport" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005507 "copper ion binding" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2185041 AAC2 "ADP/ATP carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121363 AAC3 "ADP/ATP carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MKR0 MGG_16149 "ADP,ATP carrier protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC530.10c anc1 "mitochondrial adenine nucleotide carrier Anc1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000018215 AN4064 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003655 PET9 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A516 PET9 "Potential mitochondrial inner membrane ATP/ADP translocator" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000000126 PET9 "Major ADP/ATP carrier of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000000289 AAC3 "Mitochondrial inner membrane ADP/ATP translocator" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49382ADT_KLULANo assigned EC number0.74170.75810.9868yesno
Q41630ADT2_WHEATNo assigned EC number0.84920.81610.9788N/Ano
P02723ADT_NEUCRNo assigned EC number0.77220.76320.9680N/Ano
P51881ADT2_MOUSENo assigned EC number0.55130.71530.9530yesno
Q5R5A1ADT2_PONABNo assigned EC number0.54390.70520.9395yesno
P18238ADT3_YEASTNo assigned EC number0.71330.77070.9967yesno
Q27238ADT1_ANOGANo assigned EC number0.56750.72540.9568yesno
P12857ADT2_MAIZENo assigned EC number0.78400.96470.9896N/Ano
O97470ADT_DICDINo assigned EC number0.51370.71530.9190yesno
Q09073ADT2_RATNo assigned EC number0.55130.71530.9530yesno
O22342ADT1_GOSHINo assigned EC number0.89430.96220.9896N/Ano
P27081ADT2_SOLTUNo assigned EC number0.82850.94710.9740N/Ano
P27080ADT_CHLRENo assigned EC number0.81120.75560.9740N/Ano
P31167ADT1_ARATHNo assigned EC number0.83720.95460.9947nono
O49447ADT3_ARATHNo assigned EC number0.77600.94960.9947nono
Q41629ADT1_WHEATNo assigned EC number0.86460.81610.9788N/Ano
P40941ADT2_ARATHNo assigned EC number0.83330.95710.9870yesno
P05141ADT2_HUMANNo assigned EC number0.55060.70520.9395yesno
P31691ADT_ORYSJNo assigned EC number0.78400.95210.9895yesno
P32007ADT3_BOVINNo assigned EC number0.54840.71280.9496yesno
P04709ADT1_MAIZENo assigned EC number0.78660.96470.9896N/Ano
Q09188ADT_SCHPONo assigned EC number0.77700.74550.9192yesno
P25083ADT1_SOLTUNo assigned EC number0.83030.96220.9896N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-121
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-27
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-18
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information 
 Score =  352 bits (904), Expect = e-121
 Identities = 166/295 (56%), Positives = 205/295 (69%), Gaps = 12/295 (4%)

Query: 97  FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM--IKSGRLSEPYKGIGDCFKRTMKD 154
           FA DFLMGG+SAA+SKTA APIERVK+LIQ QD +  IKSG++   Y GI +CF+R  K+
Sbjct: 7   FATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKV-PRYSGIVNCFRRVSKE 65

Query: 155 EGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLF-NFKKDRDGYWKWFAGNLGSGGAAG 213
           +G+++LWRGNTANVIRYFPTQA NFAFKDYFK +F  + +  D +WK+F  N+ SGG AG
Sbjct: 66  QGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTD-FWKFFGVNILSGGLAG 124

Query: 214 ASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCV 273
           ASSLL VY LD+ARTRLA+D     KGG+R+F GL D   K  K  G   LY+GF +S  
Sbjct: 125 ASSLLIVYPLDFARTRLASD---IGKGGDREFTGLFDCLMKISKQTGFLSLYQGFGVSVQ 181

Query: 274 GIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMT 333
           GIIVYRG YFG+YDS K ++       +    +A+   +T  AGL SYP DTVRRRMMM 
Sbjct: 182 GIIVYRGAYFGLYDSAKALLFGNDKNTNILYKWAVAQTVTILAGLISYPFDTVRRRMMMM 241

Query: 334 SG----EAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQ 384
           SG      ++Y  +LD + +ILKNEG    FKGA AN+LR   GA VL  YD+LQ
Sbjct: 242 SGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLRGAGGALVLVFYDELQ 296

Length = 300
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG1519297 consensus Predicted mitochondrial carrier protein 99.92
KOG2745321 consensus Mitochondrial carrier protein [General f 99.89
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
KOG1519297 consensus Predicted mitochondrial carrier protein 99.75
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.72
KOG2954427 consensus Mitochondrial carrier protein [General f 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.56
KOG2954427 consensus Mitochondrial carrier protein [General f 98.68
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=6.9e-60  Score=413.11  Aligned_cols=285  Identities=26%  Similarity=0.402  Sum_probs=250.5

Q ss_pred             hHHHHHHHHHHHHHHhhhcccHHHHHHHHHcCccccccCCCCCCCcchHHHHHHHhhhhchhhhcccchHHHHhhhhhhh
Q 016015           97 FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQA  176 (397)
Q Consensus        97 ~~~~~~ag~~ag~~~~~i~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gLyrG~~~~l~~~~~~~~  176 (397)
                      -+.++++|.+||+++++++||+|++|+|+|+++..   +...+.|+++.++++.|+|.||++|||||++|++++..+.++
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~---~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWg   81 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR---TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWG   81 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc---cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHH
Confidence            35667999999999999999999999999999432   123456999999999999999999999999999999999999


Q ss_pred             hHHhHHHHHHHHhcccCCCCCchhhhhhHhhHhHHHHHHHHHhhccHHHHHHHHhcchhhhhcCCCcccCcHHHHHHHHH
Q 016015          177 LNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTM  256 (397)
Q Consensus       177 ~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pldviktr~q~~~~~~~~~~~~~y~~~~~~~~~i~  256 (397)
                      +||.+||.+|+++.+..+...  ..+..++.+++.||+++.++|+|++|+|||++.|...   .....|++++|++++|+
T Consensus        82 iYF~~Y~~~K~~~~~~~~~~~--l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~---~~~~~Y~~~f~a~rki~  156 (299)
T KOG0764|consen   82 LYFFFYDFLKSFITEGFNSGL--LSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKN---VQSTAYKGMFDALRKIY  156 (299)
T ss_pred             HHHHHHHHHHHHHhcCCCccc--chHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccc---ccccccccHHHHHHHHH
Confidence            999999999999965544332  4567899999999999999999999999999998762   23368999999999999


Q ss_pred             HhhCcccccccchHHHHHHHHHHhHHHHHHHhhHHHHhcC--CCCc---chHHHHHHHHHHHHhhhhhcchHHHHHHhhc
Q 016015          257 KSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTG--KLQD---SFFASFALGWLITNGAGLASYPIDTVRRRMM  331 (397)
Q Consensus       257 ~~~G~~glyrG~~~~llr~~~~~~i~f~~ye~lk~~~~~~--~~~~---~~~~~~~~g~~ag~~~~~~t~Pldviktr~q  331 (397)
                      ++||++|||+|+.|.++... +.+++|.+||.+|..+.+.  ...+   +-...++.+.++.++|+.+|||++|+|+|||
T Consensus       157 k~EG~rgLY~GlVP~L~Gvs-hgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ  235 (299)
T KOG0764|consen  157 KEEGFRGLYKGLVPGLLGVS-HGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQ  235 (299)
T ss_pred             HHHhHHHHHhhhhhHhhhhc-hhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            99999999999999999754 9999999999999988432  2222   2356666677999999999999999999999


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHhhhhHH-HHHHHHHHHHHcCCC
Q 016015          332 MTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGV-LAGYDKLQLIVFGKK  391 (397)
Q Consensus       332 ~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~llr~~~~~~~-f~~ye~~~~~l~~~~  391 (397)
                      .++. ...|++.+++++++||+||++|||||+.++++|.+|.+.+ |.+||.+++.|....
T Consensus       236 ~~~~-~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~  295 (299)
T KOG0764|consen  236 DQSD-NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR  295 (299)
T ss_pred             hccc-CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence            8865 6789999999999999999999999999999999999998 999999999887654

>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-69
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-06
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (659), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/299 (48%), Positives = 183/299 (61%), Gaps = 16/299 (5%)
Query: 97  FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 156
           F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++G
Sbjct: 7   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 65
Query: 157 IVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXX 215
            ++ WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN          
Sbjct: 66  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 125
Query: 216 XXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGI 275
              FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GFN+S  GI
Sbjct: 126 SLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 183
Query: 276 IVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLI----TNGAGLASYPIDTVRRRMM 331
           I+YR  YFG+YD+ K     G L D       + W+I    T  AGL SYP DTVRRRMM
Sbjct: 184 IIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 238
Query: 332 MTSGEA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIV 387
           M SG     + Y  ++D + +I K+EG K+ FKGA +N+LR          YD+++  V
Sbjct: 239 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-140
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-41
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-23
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  400 bits (1030), Expect = e-140
 Identities = 156/296 (52%), Positives = 198/296 (66%), Gaps = 8/296 (2%)

Query: 96  GFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDE 155
            F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++
Sbjct: 6   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQH-ASKQISAEKQYKGIIDCVVRIPKEQ 64

Query: 156 GIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLGSGGAAGA 214
           G ++ WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNL SGGAAGA
Sbjct: 65  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124

Query: 215 SSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVG 274
           +SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GFN+S  G
Sbjct: 125 TSLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 182

Query: 275 IIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTS 334
           II+YR  YFG+YD+ K  +L          S+ +   +T  AGL SYP DTVRRRMMM S
Sbjct: 183 IIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS 241

Query: 335 GEA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 387
           G     + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD+++  V
Sbjct: 242 GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-58  Score=433.80  Aligned_cols=289  Identities=52%  Similarity=0.867  Sum_probs=244.7

Q ss_pred             chhHHHHHHHHHHHHHHhhhcccHHHHHHHHHcCccccccCCCCCCCcchHHHHHHHhhhhchhhhcccchHHHHhhhhh
Q 016015           95 AGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPT  174 (397)
Q Consensus        95 ~~~~~~~~ag~~ag~~~~~i~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gLyrG~~~~l~~~~~~  174 (397)
                      .+.+.++++|++||+++.++++|+|+||+|+|++...... .....|+++++++++|+++||++|||||+.+++++.+|.
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~-~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI-SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSC-CGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccccccc-ccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            4678899999999999999999999999999998642111 112358999999999999999999999999999999999


Q ss_pred             hhhHHhHHHHHHHHhccc-CCCCCchhhhhhHhhHhHHHHHHHHHhhccHHHHHHHHhcchhhhhcCCCcccCcHHHHHH
Q 016015          175 QALNFAFKDYFKRLFNFK-KDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYR  253 (397)
Q Consensus       175 ~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pldviktr~q~~~~~~~~~~~~~y~~~~~~~~  253 (397)
                      ++++|.+||.+|+.+... ...+.........+++|++||++++++++|+|+||+|+|++...  .+....|++++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~~  161 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNCIT  161 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC--CCcCcCCCCHHHHHH
Confidence            999999999999954332 22222223456789999999999999999999999999997531  122457899999999


Q ss_pred             HHHHhhCcccccccchHHHHHHHHHHhHHHHHHHhhHHHHhcCCCCcchHHHHHHHHHHHHhhhhhcchHHHHHHhhccc
Q 016015          254 KTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMT  333 (397)
Q Consensus       254 ~i~~~~G~~glyrG~~~~llr~~~~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~~  333 (397)
                      +|+++||++|||||+.++++|.+|+++++|.+||.+|+.+.+. .+.+....+++|+++|++++++++|+||||+|||.+
T Consensus       162 ~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~  240 (297)
T 1okc_A          162 KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ  240 (297)
T ss_dssp             HHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999977543 235677889999999999999999999999999987


Q ss_pred             CCC---CCCCCCHHHHHHHHHHhhCccccccchHHHHHHHhhhhHHHHHHHHHHHHH
Q 016015          334 SGE---AVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV  387 (397)
Q Consensus       334 ~~~---~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~llr~~~~~~~f~~ye~~~~~l  387 (397)
                      ...   ...|++++||+++|+++||++|||||+.|+++|..+++..|.+||.+|+++
T Consensus       241 ~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          241 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             TTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccceeeehHHHHHHhhC
Confidence            532   347999999999999999999999999999999755443499999998753
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 397
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-47
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  161 bits (407), Expect = 2e-47
 Identities = 151/291 (51%), Positives = 191/291 (65%), Gaps = 8/291 (2%)

Query: 97  FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 156
           F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++G
Sbjct: 6   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 64

Query: 157 IVALWRGNTANVIRYFPTQALNFAFKD-YFKRLFNFKKDRDGYWKWFAGNLGSGGAAGAS 215
            ++ WRGN ANVIRYFPTQALNFAFKD Y +           +W++FAGNL SGGAAGA+
Sbjct: 65  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124

Query: 216 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGI 275
           SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GFN+S  GI
Sbjct: 125 SLCFVYPLDFARTRLAADVG--KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 182

Query: 276 IVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSG 335
           I+YR  YFG+YD+ K ++           S+ +   +T  AGL SYP DTVRRRMMM SG
Sbjct: 183 IIYRAAYFGVYDTAKGML-PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 241

Query: 336 EA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKL 383
                + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD++
Sbjct: 242 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI 292

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.98
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=2.8e-53  Score=395.96  Aligned_cols=286  Identities=53%  Similarity=0.874  Sum_probs=251.4

Q ss_pred             cchhHHHHHHHHHHHHHHhhhcccHHHHHHHHHcCccccccCCCCCCCcchHHHHHHHhhhhchhhhcccchHHHHhhhh
Q 016015           94 FAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFP  173 (397)
Q Consensus        94 ~~~~~~~~~ag~~ag~~~~~i~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gLyrG~~~~l~~~~~  173 (397)
                      +.+++.+++||++|++++.+++||||+||+|+|++..... ......|+++++++++++++||+++||||+.+.+++..+
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC-CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            4588999999999999999999999999999999875432 223346899999999999999999999999999999999


Q ss_pred             hhhhHHhHHHHHHHHhcccCCCC-CchhhhhhHhhHhHHHHHHHHHhhccHHHHHHHHhcchhhhhcCCCcccCcHHHHH
Q 016015          174 TQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVY  252 (397)
Q Consensus       174 ~~~~~f~~ye~~k~~~~~~~~~~-~~~~~~~~~~~ag~~ag~~~~~~~~Pldviktr~q~~~~~~~~~~~~~y~~~~~~~  252 (397)
                      ..+++|.+||.+++.+....... +........+++|++||+++.++++|+|++|+|+|.+...  ......|.+..+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~--~~~~~~~~~~~~~~  159 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccc--cccccccccHHHHH
Confidence            99999999999999887665443 3334456788999999999999999999999999988642  23345788999999


Q ss_pred             HHHHHhhCcccccccchHHHHHHHHHHhHHHHHHHhhHHHHhcCCCCcchHHHHHHHHHHHHhhhhhcchHHHHHHhhcc
Q 016015          253 RKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMM  332 (397)
Q Consensus       253 ~~i~~~~G~~glyrG~~~~llr~~~~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~g~~ag~~~~~~t~Pldviktr~q~  332 (397)
                      ++++++||+++||+|+.+++++.+|+++++|.+||.+|+.+.+. ........++++.++++++++++||+||||+|||.
T Consensus       160 ~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~  238 (292)
T d1okca_         160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  238 (292)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc-cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999876443 34567788999999999999999999999999999


Q ss_pred             cCCC---CCCCCCHHHHHHHHHHhhCccccccchHHHHHHHhhhhHHHHHHHHH
Q 016015          333 TSGE---AVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKL  383 (397)
Q Consensus       333 ~~~~---~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~llr~~~~~~~f~~ye~~  383 (397)
                      +..+   ...|++++||+++|+++||+++||||+.|+++|.+|++.+|++||++
T Consensus       239 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~~~ye~l  292 (292)
T d1okca_         239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI  292 (292)
T ss_dssp             TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhhhHhhcC
Confidence            8643   34689999999999999999999999999999988876669999964
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure