Citrus Sinensis ID: 016028
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 396 | ||||||
| 224059428 | 334 | metal tolerance protein [Populus trichoc | 0.843 | 1.0 | 0.663 | 1e-126 | |
| 224168583 | 330 | metal tolerance protein [Populus trichoc | 0.833 | 1.0 | 0.668 | 1e-124 | |
| 359478906 | 382 | PREDICTED: metal tolerance protein B-lik | 0.959 | 0.994 | 0.619 | 1e-119 | |
| 356542164 | 388 | PREDICTED: metal tolerance protein B-lik | 0.931 | 0.951 | 0.551 | 1e-111 | |
| 297745995 | 367 | unnamed protein product [Vitis vinifera] | 0.871 | 0.940 | 0.567 | 1e-111 | |
| 356541207 | 370 | PREDICTED: metal tolerance protein B-lik | 0.931 | 0.997 | 0.587 | 1e-110 | |
| 449455080 | 386 | PREDICTED: metal tolerance protein B-lik | 0.959 | 0.984 | 0.551 | 1e-107 | |
| 449508507 | 386 | PREDICTED: metal tolerance protein B-lik | 0.959 | 0.984 | 0.548 | 1e-107 | |
| 255558944 | 346 | cation efflux protein/ zinc transporter, | 0.858 | 0.982 | 0.561 | 1e-95 | |
| 158828212 | 359 | Ztp14 [Cleome spinosa] | 0.828 | 0.913 | 0.512 | 1e-95 |
| >gi|224059428|ref|XP_002299844.1| metal tolerance protein [Populus trichocarpa] gi|222847102|gb|EEE84649.1| metal tolerance protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/342 (66%), Positives = 270/342 (78%), Gaps = 8/342 (2%)
Query: 55 CIFSKQENNTLESTERSKSAIKLFCLIIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDI 114
CIF KQEN TLES ERSKSA KL LIIF LI M VEVVGG KANSLAV+TDAAHLLTD+
Sbjct: 1 CIFPKQENFTLESEERSKSATKLSGLIIFYLIVMAVEVVGGVKANSLAVITDAAHLLTDV 60
Query: 115 AGFSISLFAVWASGWNATSQYSFGFNRFEILGALVSVQLIWLISGILVYEAVDRIVHKSP 174
AGFSISLFAVW SGW ATS SFG++R E+LGAL+SVQLIWLISG+L+YEA+DRI+HK+
Sbjct: 61 AGFSISLFAVWVSGWKATSHQSFGYSRLEVLGALLSVQLIWLISGVLIYEAIDRILHKNA 120
Query: 175 TVNGQLMFGVAAFGFLINIIMVTCIGHDHAHHACGHNHHIGGHVHGDDHGPHHEGEKLCA 234
VNG LMF +A FGF+IN IMV +GHDH+HHAC ++H H H EGE CA
Sbjct: 121 RVNGGLMFAIALFGFIINFIMVMWLGHDHSHHACHDHNHDHTHNH--------EGEDYCA 172
Query: 235 ATEENQTNLESNSPIETKMLNINLQGAYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLS 294
E +T L S +P +TK+ NIN+QGAY+HVMADLIQS GVMIAG I+W KP W +VDL
Sbjct: 173 TNEGEETKLVSGTPAKTKIWNINIQGAYVHVMADLIQSVGVMIAGAIIWAKPDWLVVDLI 232
Query: 295 CTLIFAAFALSTTVPMLKTIFVILMERTPSEINVARLQRDLECIKGVQTIHDLHVWAITV 354
CTL+F+ F L TT+PML+ IF ILMERTP EI+V RL+ L+CI+GVQ +H+LHVW+IT
Sbjct: 233 CTLLFSTFVLFTTLPMLRDIFCILMERTPHEIDVGRLESALKCIEGVQDVHNLHVWSITA 292
Query: 355 GKLVLSCHVIAEPAVSSSEILDKIRDYCQKTHRIYHVTVQIE 396
GKLVLSCHV+AEP SS EIL I +YC+K HRI+++T+QIE
Sbjct: 293 GKLVLSCHVMAEPGASSPEILRMIGEYCEKMHRIHNITIQIE 334
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224168583|ref|XP_002339166.1| metal tolerance protein [Populus trichocarpa] gi|222874545|gb|EEF11676.1| metal tolerance protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359478906|ref|XP_002280383.2| PREDICTED: metal tolerance protein B-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356542164|ref|XP_003539540.1| PREDICTED: metal tolerance protein B-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297745995|emb|CBI16051.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356541207|ref|XP_003539072.1| PREDICTED: metal tolerance protein B-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449455080|ref|XP_004145281.1| PREDICTED: metal tolerance protein B-like [Cucumis sativus] gi|449474024|ref|XP_004154052.1| PREDICTED: metal tolerance protein B-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449508507|ref|XP_004163331.1| PREDICTED: metal tolerance protein B-like [Cucumis sativus] gi|386783471|gb|AFJ24701.1| metal transport protein 4 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255558944|ref|XP_002520495.1| cation efflux protein/ zinc transporter, putative [Ricinus communis] gi|223540337|gb|EEF41908.1| cation efflux protein/ zinc transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|158828212|gb|ABW81090.1| Ztp14 [Cleome spinosa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 396 | ||||||
| TAIR|locus:2043117 | 375 | MTPB1 "AT2G29410" [Arabidopsis | 0.421 | 0.445 | 0.532 | 3.4e-92 | |
| TAIR|locus:2044382 | 398 | ZAT "AT2G46800" [Arabidopsis t | 0.426 | 0.424 | 0.532 | 4e-83 | |
| TAIR|locus:2099079 | 432 | MTPA2 "AT3G58810" [Arabidopsis | 0.411 | 0.377 | 0.485 | 1.7e-82 | |
| TAIR|locus:2079497 | 334 | MTPA1 "AT3G61940" [Arabidopsis | 0.358 | 0.425 | 0.514 | 3.7e-74 | |
| DICTYBASE|DDB_G0283629 | 543 | DDB_G0283629 "cation diffusion | 0.345 | 0.252 | 0.510 | 1e-62 | |
| WB|WBGene00011821 | 360 | cdf-2 [Caenorhabditis elegans | 0.358 | 0.394 | 0.387 | 7.8e-56 | |
| ZFIN|ZDB-GENE-060315-10 | 388 | slc30a8 "solute carrier family | 0.856 | 0.873 | 0.347 | 9.9e-55 | |
| GENEDB_PFALCIPARUM|PF07_0065 | 556 | PF07_0065 "zinc transporter, p | 0.393 | 0.280 | 0.428 | 4.1e-54 | |
| UNIPROTKB|Q8IBU1 | 556 | PF07_0065 "Zinc transporter, p | 0.393 | 0.280 | 0.428 | 4.1e-54 | |
| ZFIN|ZDB-GENE-041014-347 | 398 | slc30a2 "solute carrier family | 0.391 | 0.389 | 0.401 | 6.1e-54 |
| TAIR|locus:2043117 MTPB1 "AT2G29410" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 89/167 (53%), Positives = 126/167 (75%)
Query: 230 EKLCAATEENQTNLESNSPIETKMLNINLQGAYLHVMADLIQSAGVMIAGLILWVKPGWS 289
+++ A EE + N +K +NIN+QGAYLH MAD+IQS GVMI G I+WVKP W
Sbjct: 207 KEVVAEEEEEEMNPLKGEKSSSKEMNINIQGAYLHAMADMIQSLGVMIGGGIIWVKPKWV 266
Query: 290 IVDLSCTLIFAAFALSTTVPMLKTIFVILMERTPSEINVARLQRDLECIKGVQTIHDLHV 349
+VDL CTL+F+AFAL+ T+P+LK IF ILMER P ++++ +L+R L+ I GV+ ++DLHV
Sbjct: 267 LVDLICTLVFSAFALAATLPILKNIFGILMERVPRDMDIEKLERGLKRIDGVKIVYDLHV 326
Query: 350 WAITVGKLVLSCHVIAEPAVSSSEILDKIRDYCQKTHRIYHVTVQIE 396
W ITVG++VLSCH++ EP S EI+ +R++C+K++ IYH TVQ+E
Sbjct: 327 WEITVGRIVLSCHILPEPGASPKEIITGVRNFCRKSYGIYHATVQVE 373
|
|
| TAIR|locus:2044382 ZAT "AT2G46800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099079 MTPA2 "AT3G58810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079497 MTPA1 "AT3G61940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0283629 DDB_G0283629 "cation diffusion facilitator (CDF) family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00011821 cdf-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060315-10 slc30a8 "solute carrier family 30 (zinc transporter), member 8" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| GENEDB_PFALCIPARUM|PF07_0065 PF07_0065 "zinc transporter, putative" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8IBU1 PF07_0065 "Zinc transporter, putative" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-041014-347 slc30a2 "solute carrier family 30 (zinc transporter), member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 396 | |||
| TIGR01297 | 268 | TIGR01297, CDF, cation diffusion facilitator famil | 2e-67 | |
| COG1230 | 296 | COG1230, CzcD, Co/Zn/Cd efflux system component [I | 2e-62 | |
| pfam01545 | 273 | pfam01545, Cation_efflux, Cation efflux family | 2e-41 | |
| PRK03557 | 312 | PRK03557, PRK03557, zinc transporter ZitB; Provisi | 6e-37 | |
| COG0053 | 304 | COG0053, MMT1, Predicted Co/Zn/Cd cation transport | 1e-21 |
| >gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 2e-67
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 53/313 (16%)
Query: 88 MVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFNRFEILGA 147
M++++VGG + SLA++ DA H L+D+A +I+L A+ S A ++ FG R EIL A
Sbjct: 3 MLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAA 62
Query: 148 LVSVQLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIGHDHAHHA 207
L++ + +++ ++YEA++R+++ P ++G M VA G ++N+I+ + H
Sbjct: 63 LLNGLFLVVVALFILYEAIERLINPEPEIDGGTMLIVAIVGLIVNLILAL-----YLHRV 117
Query: 208 CGHNHHIGGHVHGDDHGPHHEGEKLCAATEENQTNLESNSPIETKMLNINLQGAYLHVMA 267
GH ++ L+ A LHV++
Sbjct: 118 -GHRLG-----------------------------------------SLALRAAALHVLS 135
Query: 268 DLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTVPMLKTIFVILMERTPSEIN 327
D + S GV+I L+++ GW D L+ + L T +LK +L++ P E +
Sbjct: 136 DALSSVGVLIGALLIYF--GWHWADPIAALLISLLILYTAFRLLKESINVLLDAAPDEED 193
Query: 328 VARLQRDLECIKGVQTIHDLHVWAITVGKLVLSCHVIAEPAVSSSEI----LDKIRDYCQ 383
+ +++ + I GV+ +HDLH+W I GKL L HV+ +P + + L+ R+ +
Sbjct: 194 LEEIKKAILSIPGVKGVHDLHIWRIGPGKLFLDVHVVVDPDLDLKQAHDIALEIEREILK 253
Query: 384 KTHRIYHVTVQIE 396
+ I HVT+Q+E
Sbjct: 254 RHPGIEHVTIQVE 266
|
This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence [Transport and binding proteins, Cations and iron carrying compounds]. Length = 268 |
| >gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family | Back alignment and domain information |
|---|
| >gnl|CDD|235130 PRK03557, PRK03557, zinc transporter ZitB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 396 | |||
| COG1230 | 296 | CzcD Co/Zn/Cd efflux system component [Inorganic i | 100.0 | |
| KOG1482 | 379 | consensus Zn2+ transporter [Inorganic ion transpor | 100.0 | |
| PRK03557 | 312 | zinc transporter ZitB; Provisional | 100.0 | |
| PRK09509 | 299 | fieF ferrous iron efflux protein F; Reviewed | 100.0 | |
| COG0053 | 304 | MMT1 Predicted Co/Zn/Cd cation transporters [Inorg | 100.0 | |
| TIGR01297 | 268 | CDF cation diffusion facilitator family transporte | 100.0 | |
| KOG1483 | 404 | consensus Zn2+ transporter ZNT1 and related Cd2+/Z | 100.0 | |
| KOG1484 | 354 | consensus Putative Zn2+ transporter MSC2 (cation d | 100.0 | |
| KOG1485 | 412 | consensus Mitochondrial Fe2+ transporter MMT1 and | 100.0 | |
| PF01545 | 284 | Cation_efflux: Cation efflux family; InterPro: IPR | 100.0 | |
| COG3965 | 314 | Predicted Co/Zn/Cd cation transporters [Inorganic | 99.94 | |
| KOG2802 | 503 | consensus Membrane protein HUEL (cation efflux sup | 99.84 | |
| COG0053 | 304 | MMT1 Predicted Co/Zn/Cd cation transporters [Inorg | 98.1 | |
| TIGR01297 | 268 | CDF cation diffusion facilitator family transporte | 97.9 | |
| PRK09509 | 299 | fieF ferrous iron efflux protein F; Reviewed | 97.83 | |
| PRK03557 | 312 | zinc transporter ZitB; Provisional | 97.05 | |
| COG1230 | 296 | CzcD Co/Zn/Cd efflux system component [Inorganic i | 95.36 | |
| KOG1485 | 412 | consensus Mitochondrial Fe2+ transporter MMT1 and | 95.29 | |
| PF01545 | 284 | Cation_efflux: Cation efflux family; InterPro: IPR | 89.29 | |
| PLN02601 | 303 | beta-carotene hydroxylase | 87.54 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 85.21 | |
| PF14535 | 96 | AMP-binding_C_2: AMP-binding enzyme C-terminal dom | 84.62 | |
| PF03780 | 108 | Asp23: Asp23 family; InterPro: IPR005531 This entr | 80.97 |
| >COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-54 Score=407.21 Aligned_cols=277 Identities=32% Similarity=0.606 Sum_probs=262.9
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhheecChHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcCcchHHHHHHH
Q 016028 69 ERSKSAIKLFCLIIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFNRFEILGAL 148 (396)
Q Consensus 69 ~~~~~~~~l~~~l~~n~~~~v~~l~~g~~s~S~aL~aDa~hsl~D~~s~~i~l~a~~~s~k~~~~~~pfG~~R~E~l~~l 148 (396)
.+.+.+|++++++++|++|+++|+++|+++||+||+||++||+.|+++.++++++.++++|+++++|||||.|+|.|+++
T Consensus 16 ~~~~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 16 DNPRNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 016028 149 VSVQLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIGHDHAHHACGHNHHIGGHVHGDDHGPHHE 228 (396)
Q Consensus 149 i~~~~l~~~~~~l~~esi~~li~~~~~~~~~~~~~i~~~~lv~n~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 228 (396)
+++++++.+++++++|+++||.+|. +++...|++++++|+++|+++++.+.++
T Consensus 96 ~nav~Li~~s~~I~~EAi~R~~~P~-~i~~~~ml~va~~GL~vN~~~a~ll~~~-------------------------- 148 (296)
T COG1230 96 LNALLLIVVSLLILWEAIQRLLAPP-PIHYSGMLVVAIIGLVVNLVSALLLHKG-------------------------- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-CCCccchHHHHHHHHHHHHHHHHHhhCC--------------------------
Confidence 9999999999999999999999997 5556999999999999999999999742
Q ss_pred cchhhhhhhhcccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHhhH
Q 016028 229 GEKLCAATEENQTNLESNSPIETKMLNINLQGAYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTV 308 (396)
Q Consensus 229 ~e~~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~l~s~~vlva~~l~~~~~~~~~~D~i~siii~~~i~~~~~ 308 (396)
+.+|.|+++.++|.++|+++|+++++++++++++ +|+|+||+++++++++++..++
T Consensus 149 -----------------------~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~-~w~~~Dpi~si~i~~lil~~a~ 204 (296)
T COG1230 149 -----------------------HEENLNMRGAYLHVLGDALGSVGVIIAAIVIRFT-GWSWLDPILSIVIALLILSSAW 204 (296)
T ss_pred -----------------------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCccchHHHHHHHHHHHHHHH
Confidence 2357899999999999999999999999999887 9999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccHHHHHHHHHcccCccceeeeEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHhhCCC
Q 016028 309 PMLKTIFVILMERTPSEINVARLQRDLECIKGVQTIHDLHVWAITVGKLVLSCHVIAEPAVSSSEILDKIRDYCQKTHRI 388 (396)
Q Consensus 309 ~~~~~~~~~Ll~~sp~~~~~~~i~~~l~~~~~V~~v~~l~~~~~~~~~~~v~v~I~v~~~~~~~~i~~~i~~~l~~~~~v 388 (396)
+++|++..+|++.+|+..+.+++++.+.+.|||.++||+|+|+++++...+++|+++++..+.+++.+++++++.++|++
T Consensus 205 ~l~k~s~~iLle~~P~~id~~~~~~~l~~~~~v~~vhdlHvWsi~~~~~~~t~Hv~v~~~~~~~~~~~~~~~~l~~~~~I 284 (296)
T COG1230 205 PLLKESLNILLEGVPEGIDIDKVREALLRIPGVASVHDLHVWSITGGEHALTLHVVVDEVADADAALDQIVRRLLEKYGI 284 (296)
T ss_pred HHHHHHHHHHhhcCCCccCHHHHHHHHhcCCCccceeecccCCCCCCceeEEEEEEecCccchHHHHHHHHHHHhhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999997777777899999999999999
Q ss_pred ceeEEeeC
Q 016028 389 YHVTVQIE 396 (396)
Q Consensus 389 ~~vtV~ve 396 (396)
.|+|||+|
T Consensus 285 ~hvTiQ~e 292 (296)
T COG1230 285 EHVTIQLE 292 (296)
T ss_pred ceEEEEec
Confidence 99999997
|
|
| >KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK03557 zinc transporter ZitB; Provisional | Back alignment and domain information |
|---|
| >PRK09509 fieF ferrous iron efflux protein F; Reviewed | Back alignment and domain information |
|---|
| >COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01297 CDF cation diffusion facilitator family transporter | Back alignment and domain information |
|---|
| >KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt | Back alignment and domain information |
|---|
| >COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01297 CDF cation diffusion facilitator family transporter | Back alignment and domain information |
|---|
| >PRK09509 fieF ferrous iron efflux protein F; Reviewed | Back alignment and domain information |
|---|
| >PRK03557 zinc transporter ZitB; Provisional | Back alignment and domain information |
|---|
| >COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt | Back alignment and domain information |
|---|
| >PLN02601 beta-carotene hydroxylase | Back alignment and domain information |
|---|
| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
|---|
| >PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B | Back alignment and domain information |
|---|
| >PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 396 | |||
| 3h90_A | 283 | Ferrous-iron efflux pump FIEF; membrane protein, z | 2e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 2e-19
Identities = 45/319 (14%), Positives = 101/319 (31%), Gaps = 53/319 (16%)
Query: 81 IIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFN 140
+ + +++++ + S++++ L DI +L V S A +SFG
Sbjct: 10 TAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHG 69
Query: 141 RFEILGALVSVQLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIG 200
+ E L AL I + L + ++ +P + + V + II+V+
Sbjct: 70 KAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVS--- 126
Query: 201 HDHAHHACGHNHHIGGHVHGDDHGPHHEGEKLCAATEENQTNLESNSPIETKMLNINLQG 260
+ S ++
Sbjct: 127 ---------FQRWVVRRT---------------------------QSQA--------VRA 142
Query: 261 AYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTVPMLKTIFVILME 320
LH +D++ + +++A + W GW D L + L + + M L++
Sbjct: 143 DMLHYQSDVMMNGAILLALGLSWY--GWHRADALFALGIGIYILYSALRMGYEAVQSLLD 200
Query: 321 RTPSEINVARLQRDLECIKGVQTIHDLHVWAITVGKLVLSCHVIAEPAVSSSE---ILDK 377
R + + + GV HDL + + H+ E ++ + + D+
Sbjct: 201 RALPDEERQEIIDIVTSWPGVSGAHDLRTRQSGPTRFI-QIHLEMEDSLPLVQAHMVADQ 259
Query: 378 IRDYCQKTHRIYHVTVQIE 396
+ + V + +
Sbjct: 260 VEQAILRRFPGSDVIIHQD 278
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 396 | |||
| 3j1z_P | 306 | YIIP, cation efflux family protein; zinc transport | 100.0 | |
| 3h90_A | 283 | Ferrous-iron efflux pump FIEF; membrane protein, z | 100.0 | |
| 3byp_A | 94 | CZRB protein; membrane protein, zinc transporter, | 99.35 | |
| 2zzt_A | 107 | Putative uncharacterized protein; cation diffusion | 99.22 | |
| 3j1z_P | 306 | YIIP, cation efflux family protein; zinc transport | 96.83 | |
| 3h90_A | 283 | Ferrous-iron efflux pump FIEF; membrane protein, z | 96.72 |
| >3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-53 Score=408.72 Aligned_cols=275 Identities=16% Similarity=0.178 Sum_probs=258.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhheecChHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcCcchHHHHHHHHHH
Q 016028 72 KSAIKLFCLIIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFNRFEILGALVSV 151 (396)
Q Consensus 72 ~~~~~l~~~l~~n~~~~v~~l~~g~~s~S~aL~aDa~hsl~D~~s~~i~l~a~~~s~k~~~~~~pfG~~R~E~l~~li~~ 151 (396)
..++..++++++|++++++|+++|+++||+||+|||+||++|+++.++++++.+.++||+|++|||||+|+|++++++++
T Consensus 10 ~vr~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~~ 89 (306)
T 3j1z_P 10 WVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQS 89 (306)
T ss_dssp CSSTTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHHH
Confidence 34667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCCCccch
Q 016028 152 QLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIGHDHAHHACGHNHHIGGHVHGDDHGPHHEGEK 231 (396)
Q Consensus 152 ~~l~~~~~~l~~esi~~li~~~~~~~~~~~~~i~~~~lv~n~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~e~ 231 (396)
++++++++++++|+++++++|++.....+++++++++++.|+.+++++++.
T Consensus 90 ~~l~~~~~~i~~eai~~l~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------------------------- 140 (306)
T 3j1z_P 90 AFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRA----------------------------- 140 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCGGGTTCCHHHHHHHHHHHHHHHHHHHHH-----------------------------
T ss_pred HHHHHHHHHHHHHhhhheecCCCccccccchhhhhhHhhhhHHHHHHHHHh-----------------------------
Confidence 999999999999999999999877777888999999999999999888754
Q ss_pred hhhhhhhcccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHhhHHHH
Q 016028 232 LCAATEENQTNLESNSPIETKMLNINLQGAYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTVPML 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~l~s~~vlva~~l~~~~~~~~~~D~i~siii~~~i~~~~~~~~ 311 (396)
+++.+|.+++++++|+++|+++|++++++.++.++ +|+|+||++++++++++++.+++++
T Consensus 141 ------------------~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~~--g~~~~Dpi~ai~Ia~~I~~~~~~l~ 200 (306)
T 3j1z_P 141 ------------------LAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQY--GWWWADGLFAVLIACYIGQQAFDLG 200 (306)
T ss_dssp ------------------HTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCCS--SSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------ccccCCHHHHHHHHhhcchhhhhhHHHHHHHHHHh--CcchhhhHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999998777654 8999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcccHHHHHHHHHcccCccceeeeEEEEeeCCeEEEEEEEEeCCCCC---HHHHHHHHHHHHHhhCCC
Q 016028 312 KTIFVILMERTPSEINVARLQRDLECIKGVQTIHDLHVWAITVGKLVLSCHVIAEPAVS---SSEILDKIRDYCQKTHRI 388 (396)
Q Consensus 312 ~~~~~~Ll~~sp~~~~~~~i~~~l~~~~~V~~v~~l~~~~~~~~~~~v~v~I~v~~~~~---~~~i~~~i~~~l~~~~~v 388 (396)
|++...|+|++|++++.++|++.+++.|||.++|++|+|+. |+++++++||++|++++ +|++.+++|++|++++++
T Consensus 201 ~~s~~~Ll~~~~~~~~~~~I~~~i~~~~~V~~vh~l~~~~~-G~~~~v~~hi~v~~~~sl~eah~i~~~ie~~l~~~~~~ 279 (306)
T 3j1z_P 201 YRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQA-GKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFED 279 (306)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHSTTBCCCCCBCCEEE-TTEEEEEECCEECTTSBHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHhCcccchhHHHHHHHHHhcCCCcceeeeEEEEEE-CCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999999999999999999999999997 56888999999999997 478999999999999999
Q ss_pred ceeEEeeC
Q 016028 389 YHVTVQIE 396 (396)
Q Consensus 389 ~~vtV~ve 396 (396)
.++|||+|
T Consensus 280 ~~v~Ihve 287 (306)
T 3j1z_P 280 AEVIIHQD 287 (306)
T ss_dssp CEEEECCE
T ss_pred CeEEEEeC
Confidence 99999987
|
| >3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A | Back alignment and structure |
|---|
| >3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A | Back alignment and structure |
|---|
| >2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} | Back alignment and structure |
|---|
| >3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 396 | ||||
| d2qfia2 | 204 | f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF { | 1e-18 | |
| d2qfia1 | 82 | d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF | 0.002 |
| >d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Cation efflux protein transmembrane domain-like superfamily: Cation efflux protein transmembrane domain-like family: Cation efflux protein transmembrane domain-like domain: Ferrous-iron efflux pump FieF species: Escherichia coli [TaxId: 562]
Score = 81.4 bits (200), Expect = 1e-18
Identities = 35/241 (14%), Positives = 76/241 (31%), Gaps = 49/241 (20%)
Query: 81 IIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFN 140
+ + +++++ + S++++ L DI +L V S A +SFG
Sbjct: 13 TAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHG 72
Query: 141 RFEILGALVSVQLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIG 200
+ E L AL I + L + ++ +P + + V + II+V+
Sbjct: 73 KAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQR 132
Query: 201 HDHAHHACGHNHHIGGHVHGDDHGPHHEGEKLCAATEENQTNLESNSPIETKMLNINLQG 260
+ ++
Sbjct: 133 WVVRRTQ-----------------------------------------------SQAVRA 145
Query: 261 AYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTVPMLKTIFVILME 320
LH +D++ + +++A + W GW D L + L + + M L++
Sbjct: 146 DMLHYQSDVMMNGAILLALGLSWY--GWHRADALFALGIGIYILYSALRMGYEAVQSLLD 203
Query: 321 R 321
R
Sbjct: 204 R 204
|
| >d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} Length = 82 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 396 | |||
| d2qfia2 | 204 | Ferrous-iron efflux pump FieF {Escherichia coli [T | 99.97 | |
| d2qfia1 | 82 | Ferrous-iron efflux pump FieF (YiiP) {Escherichia | 99.04 | |
| d3bypa1 | 82 | Putative Zinc transporter CzrB {Thermus thermophil | 99.02 | |
| d2cu6a1 | 91 | Hypothetical protein TTHB138 {Thermus thermophilus | 83.59 |
| >d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Cation efflux protein transmembrane domain-like superfamily: Cation efflux protein transmembrane domain-like family: Cation efflux protein transmembrane domain-like domain: Ferrous-iron efflux pump FieF species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.8e-38 Score=283.90 Aligned_cols=201 Identities=17% Similarity=0.253 Sum_probs=185.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhheecChHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcCcchHHHHHHHHHH
Q 016028 72 KSAIKLFCLIIFSLIAMVVEVVGGFKANSLAVMTDAAHLLTDIAGFSISLFAVWASGWNATSQYSFGFNRFEILGALVSV 151 (396)
Q Consensus 72 ~~~~~l~~~l~~n~~~~v~~l~~g~~s~S~aL~aDa~hsl~D~~s~~i~l~a~~~s~k~~~~~~pfG~~R~E~l~~li~~ 151 (396)
..+|.+++++++|++++++|+++|+++||.+|++|++|++.|+++.++++++.+.++||+|++|||||+|+|++++++.+
T Consensus 4 ~~~r~~~~~~~~n~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~ 83 (204)
T d2qfia2 4 LVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQS 83 (204)
T ss_dssp SSSTTSHHHHGGGTTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccCCcchhHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCCCccch
Q 016028 152 QLIWLISGILVYEAVDRIVHKSPTVNGQLMFGVAAFGFLINIIMVTCIGHDHAHHACGHNHHIGGHVHGDDHGPHHEGEK 231 (396)
Q Consensus 152 ~~l~~~~~~l~~esi~~li~~~~~~~~~~~~~i~~~~lv~n~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~e~ 231 (396)
++++++++++++|+++++++|+++.++.+++++++++++.+.++..+..+.
T Consensus 84 ~~l~~~~~~~~~~si~~l~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~----------------------------- 134 (204)
T d2qfia2 84 MFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWV----------------------------- 134 (204)
T ss_dssp TTTSSSTTGGGSSCTTSSTTTSSSSTTTSCCCCCGGGSSCGGGGTTTHHHH-----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------
Confidence 999999999999999999999877778888888888888888777776643
Q ss_pred hhhhhhhcccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHhhHHHH
Q 016028 232 LCAATEENQTNLESNSPIETKMLNINLQGAYLHVMADLIQSAGVMIAGLILWVKPGWSIVDLSCTLIFAAFALSTTVPML 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~l~s~~vlva~~l~~~~~~~~~~D~i~siii~~~i~~~~~~~~ 311 (396)
.++.+|++++++++|+++|+++|++++++.++.++ +|+|+||++++++++++++.+++++
T Consensus 135 ------------------~~~~~s~~~~a~~~~~~~D~~~s~~vii~~~~~~~--~~~~~D~i~aiii~~~i~~~~~~~~ 194 (204)
T d2qfia2 135 ------------------VRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWY--GWHRADALFALGIGIYILYSALRMG 194 (204)
T ss_dssp ------------------GGGCCSTTSGGGGGGHHHHTCCSSTTCCCTTSSCS--STTSSSSSSHHHHTTTTTTTTTTHH
T ss_pred ------------------hcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CchhhhHHHHHHHHHHHHHHHHHHH
Confidence 66788899999999999999999999987666554 7999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 016028 312 KTIFVILMER 321 (396)
Q Consensus 312 ~~~~~~Ll~~ 321 (396)
+++.+.|+|+
T Consensus 195 ~~~~~~Lld~ 204 (204)
T d2qfia2 195 YEAVQSLLDR 204 (204)
T ss_dssp HHTGGGSSCC
T ss_pred HHHHHHHhCc
Confidence 9999999986
|
| >d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|