Citrus Sinensis ID: 016042

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
Protein Sequence
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccEEEEcccccEEEEEEEEEHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccHcccHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEccccccccccccHHHHEEEEHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccEEEEEEccccEEccccccccccHccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccEcccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccEEEEccccccccccccEEEEEEEcccccccccccccccccccccccccccccccHccHcHHHccccHHHcccEEEEcccccccEEEcccccc
Coil and Loop (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLcgqwpifegtpiqRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYfccdrpnpvLQIIYLAIIGITYYFIAKssfsyipgyylsgfhrssrytSLLGVGIGVFFFLLtsfadpgtvkaenvsqyqsaypydniiytekecstckipkparskhcsicnrcvarfdhhcgwmnncigerNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGyhanlcrtntttnetVKWQDHMNWLRKVNEARASAAALKASIngmsserkppdskwktffrrspledsgavvknniydkgilhnvwevisppstrrsflrtkskss
Flexible Loop (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKasingmsserkppdskwktffrrspledsgavvknniydkgilhnvwevisppstrrsflrtkskss
Low Complexity Region (SEG)
MDVQWlliihglltllvvvSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQIllmvflavvslllasffGYHANLCRTNTTTNETVKWQDHMNWLRKVNEarasaaalkaSINGMSSERKPPDSKWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS
Disordered region (IsUnstruct)
**VQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVN*****************************FFR*****DSGAVVKNNIYDKGILHNVWEVI*****************
Disordered Region (DISOPRED)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKP*******************VVKNNIYDKGILHNVWEVI*****************
Disordered Region (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKASIN***********KWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISPP**************
Disordered Region (DISPRO)
*DVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISPPSTRRSFL*******
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	396	2.2.26 [Sep-21-2011]
Q3EBC2	397	Probable S-acyltransferas	yes	no	0.946	0.944	0.684	1e-155
O60069	356	Palmitoyltransferase swf1	yes	no	0.823	0.915	0.297	1e-31
Q7RWM9	429	Palmitoyltransferase SWF1	N/A	no	0.888	0.820	0.245	2e-28
Q5FVR1	343	Probable palmitoyltransfe	yes	no	0.454	0.524	0.391	3e-26
Q9D6H5	343	Probable palmitoyltransfe	yes	no	0.573	0.661	0.323	3e-26
Q6CG20	381	Palmitoyltransferase SWF1	yes	no	0.623	0.648	0.318	4e-25
Q58DT3	343	Probable palmitoyltransfe	yes	no	0.512	0.591	0.355	2e-24
Q9NPG8	344	Probable palmitoyltransfe	yes	no	0.452	0.520	0.355	2e-24
Q6BP23	377	Palmitoyltransferase SWF1	yes	no	0.679	0.713	0.268	9e-24
Q6FXC6	330	Palmitoyltransferase SWF1	yes	no	0.545	0.654	0.293	1e-22

>sp|Q3EBC2|ZDHC5_ARATH Probable S-acyltransferase At3g04970 OS=Arabidopsis thaliana GN=At3g04970 PE=2 SV=1

 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/387 (68%), Positives = 311/387 (80%), Gaps = 12/387 (3%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+   YTS 
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHK---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCS
Sbjct: 118 LAVIVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           ICNRCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV
Sbjct: 178 ICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           +ILTVYYG++ SFR LAP V+QWL+G+YNTQILLMVFLA+VSLLLA FF YHANLC TNT
Sbjct: 238 HILTVYYGVDKSFRSLAPRVIQWLVGTYNTQILLMVFLAIVSLLLAGFFAYHANLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTF---FRRSPLED 357
           TTNET KW+++++  +K      + A+  A   GMS E K P ++ K F    R S  E+
Sbjct: 298 TTNETFKWREYISLNKK---LSEAKASAAALKAGMSCELKKPSAESKCFGLCGRSSAREE 354

Query: 358 ---SGAVVKNNIYDKGILHNVWEVISP 381
              + A+ K N+YD+G   NV E++ P
Sbjct: 355 EVKADAIAKRNLYDRGSFQNVSEIVFP 381

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|O60069|SWF1_SCHPO Palmitoyltransferase swf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swf1 PE=3 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 174/373 (46%), Gaps = 47/373 (12%)

Query: 16  LVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAIL-SVEYFCCD 74
           L+V   L GQ P  + T I +++ F       Y L  + S + +   +A + S+  +   
Sbjct: 16  LMVFILLFGQIPKLKYTVIGKLNRFFMVTI-PYHLHVLDSRYADGRCSAAMRSLSNYVLY 74

Query: 75  RPNPVLQIIYLAII--GITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLL 132
           + NP++  +YLA+I  GI  +FI  SS +       S     S  TS+L   I ++   +
Sbjct: 75  KNNPLVVFLYLALITIGIASFFIYGSSLTQ----KFSIIDWISVLTSVLLPYISLY---I 127

Query: 133 TSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHH 192
            + ++PG +  +N ++    +PYD  I+   +CSTCK  KPARSKHC +CN CV +FDHH
Sbjct: 128 AAKSNPGKIDLKNWNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFDHH 187

Query: 193 CGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENS 252
           C W+NNC+G  N RYF  FLL  + L  + I+ LG+                 ++     
Sbjct: 188 CIWINNCVGLNNARYFFLFLLCTIQLLFHSILRLGY-----------------HFNALRD 230

Query: 253 FRKLAPHVVQWLLGSYNTQILLMVFLA--VVSLLLASFFGYHANLCRTNTTTNETVKWQD 310
            R+    +  W     +   L  VFL   + S+L+    GY   L     TTNE+ KW D
Sbjct: 231 MRQYPSFLRSWWFAIKSEGELGSVFLISLICSVLVLCLLGYEFFLVYAGYTTNESEKWSD 290

Query: 311 --HMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGAVVKNNIYD 368
             H+   RKV     + + L A     S++              + L  S + + +NIYD
Sbjct: 291 LAHLVKNRKVYMYYENGSQLLALDKDASND--------------AILVTSMSQI-DNIYD 335

Query: 369 KGILHNVWEVISP 381
            G  +N + ++ P
Sbjct: 336 NGFYNNFFSLVFP 348

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q7RWM9|SWF1_NEUCR Palmitoyltransferase SWF1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=swf-1 PE=3 SV=1

 Score =  127 bits (319), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 171/403 (42%), Gaps = 51/403 (12%)

Query: 13  LTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFC 72
           ++ +  V+F  G+ P    TPI  +H  +     +  L    ++   +   ++  +    
Sbjct: 14  ISFMTFVAFF-GRLPALRNTPISFLHRLIWIHLPNGILTVDRTLTNGRLTTSLTRLGRHL 72

Query: 73  CDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLL 132
               +P + I +  ++ +  Y        Y+P  +   F  + ++   + +     F  L
Sbjct: 73  WYDQHPTILIFFFLLLSVGEYL-------YLPVAW-PHFSFTHKFFGTIAILCPYIFLYL 124

Query: 133 TSFADPGTVKAENVSQYQSAYPYD-NIIYTEKECSTCKIPKPARSKHCSICNRCVARFDH 191
           +++ DPG + A+   +  + YPYD  + +    C TC + KPARSKHCSIC +CV R DH
Sbjct: 125 SAYTDPGVINAKTHVREMARYPYDFTLFHPGTSCETCHLLKPARSKHCSICKKCVGRMDH 184

Query: 192 HCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIEN 251
           HC ++NNC+G  N R+F+  LL    L LYG V    ++  +++     + L  ++    
Sbjct: 185 HCIFINNCVGANNQRWFILLLLSTAILTLYGGVLGLVIIRAKIQARFPYWTLMPWWTSTQ 244

Query: 252 SFRKLAPHVVQW-LLGSYNTQILLMV-----FLAVVSLLLASFFGYHANLCRTNTTTNET 305
           ++        +W LL S+  Q  + +        + + L+    GYH  L    TTTNE+
Sbjct: 245 AWNSGDLDFHRWLLLWSWGLQSGVAMGGVTLLALLTTPLVWGLLGYHLWLVYCGTTTNES 304

Query: 306 VKWQD---HMN------------------------WLRKVNEARASAAALKASINGMSSE 338
           +KWQD    M+                        W R   EA       +      SS 
Sbjct: 305 MKWQDWQAEMDEGGVYKRRMAADGSREKDLKVEPAWTRWPVEAEQIMVRTEDGKPPRSSH 364

Query: 339 RKPPDSKWKTFFRRSPLEDSGAVVKNNIYDKGILHNVWEVISP 381
           R P + +W+  +R   +E        N+YD G   N+ +V  P
Sbjct: 365 RLPGEGEWEAVWRLKDVE--------NLYDIGFWDNLVDVFLP 399

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5FVR1|ZDHC4_RAT Probable palmitoyltransferase ZDHHC4 OS=Rattus norvegicus GN=Zdhhc4 PE=2 SV=1

 Score =  120 bits (300), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 4/184 (2%)

Query: 123 VGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSI 181
           + + + FF LT   +PGT+   NV      Y +D +++ +   CSTC + KPARSKHC +
Sbjct: 108 LSVNLVFFTLTCSTNPGTITKTNVLLLLQVYEFDEVMFPKNSRCSTCDLRKPARSKHCRV 167

Query: 182 CNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVY 241
           C+RCV RFDHHC W+NNCIG  NT YF+ +LL  L      I  L      RL  +  +Y
Sbjct: 168 CDRCVHRFDHHCVWVNNCIGAWNTGYFLIYLL-TLTASAATIAILSAAFLLRLVAVSNLY 226

Query: 242 ILTVYYGIENSFRKL-APHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
             T Y      F+ +    ++Q L  ++   I L+ F+ V+SLLLA +  +   L  TN 
Sbjct: 227 QET-YLDDLGRFQAVDTGFLIQHLFLAFPRIIFLLGFVIVLSLLLAGYLCFALYLAATNQ 285

Query: 301 TTNE 304
           TTNE
Sbjct: 286 TTNE 289

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D6H5|ZDHC4_MOUSE Probable palmitoyltransferase ZDHHC4 OS=Mus musculus GN=Zdhhc4 PE=2 SV=1

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 5/232 (2%)

Query: 77  NPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFA 136
           +P   +++L + G+ Y       F Y        F         + + + + FF LT  A
Sbjct: 65  HPTFIVLHLLLQGLVYAEYTCEVFGYCREL---EFSLPYLLLPYVLLSVNLVFFTLTCAA 121

Query: 137 DPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICNRCVARFDHHCGW 195
           +PGT+   N S     Y +D++++ +   C TC + KPARSKHC +C+RCV RFDHHC W
Sbjct: 122 NPGTITKANESFLLQVYKFDDVMFPKNSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVW 181

Query: 196 MNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRK 255
           +NNCIG  NTRYF+ +LL                L  RL  +  +Y  T    + +    
Sbjct: 182 VNNCIGAWNTRYFLIYLLTLTASAATIATVTAAFLL-RLVTVSDLYQETYLDDVGHFQAV 240

Query: 256 LAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVK 307
               ++Q L  ++   + L+ F+ V+S+LLA +  +   L  TN TTNE  K
Sbjct: 241 DTVFLIQHLFLAFPRIVFLLGFVIVLSMLLAGYLCFALYLAATNQTTNEWYK 292

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6CG20|SWF1_YARLI Palmitoyltransferase SWF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SWF1 PE=3 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 29/276 (10%)

Query: 125 IGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICN 183
           I V  F+L +F+DPG +  +N +   + + +DN+++ E  ECSTCK  KPARSKH    N
Sbjct: 118 ILVVSFVLATFSDPGKITKQNHALLLNQFRFDNLMFLEDTECSTCKFTKPARSKHDRFTN 177

Query: 184 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 243
           +CVA+FDH+C W+NN +G  N R+F+ FLL +++   +G      +LAG    L+++ ++
Sbjct: 178 KCVAKFDHYCLWINNTVGLYNYRWFLFFLLGNVWTLCWGA-----LLAG----LKMIVMV 228

Query: 244 TVYYGIENSFRKLAPHVVQW---LLGSYNTQILLMVFLAVVSLLLA-SFFGYHANLCRTN 299
              Y  ++  + L     QW   ++ + N ++ ++  L+V +  LA +F   H       
Sbjct: 229 AAEY--KDHPKPLPSIFSQWWQVMITNENKRVGIIFLLSVSTGALACAFTAMHFYYIYLG 286

Query: 300 TTTNETVKWQDHMNWLRK--VNEARASAAALKASINGMSSERKPPDSKWKTFFRR----- 352
            TTNET KW D    + +  V   +     L  SI     E   P+       R      
Sbjct: 287 ATTNETDKWGDIHAAISEGSVWMFQKPGFKLDRSILLQKDEEGRPNRSLTAEEREYVAQN 346

Query: 353 ----SPLEDSGAVVKNNIYDKGILHNVWEVISPPST 384
               + L D   +V  NIYDKG L+N+  V+ P S 
Sbjct: 347 GLALTLLTDHKPIV--NIYDKGFLNNLKAVMFPNSA 380

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q58DT3|ZDHC4_BOVIN Probable palmitoyltransferase ZDHHC4 OS=Bos taurus GN=ZDHHC4 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 112/214 (52%), Gaps = 11/214 (5%)

Query: 125 IGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICN 183
           + + FF L+   +PGT+   N   +   Y +D +++ +   C TC + KPARSKHCS+CN
Sbjct: 110 VNLLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRKPARSKHCSVCN 169

Query: 184 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 243
           RCV RFDHHC W+NNCIG  NTRYF+++ L+ L      +  +  V   RL  +  VY+ 
Sbjct: 170 RCVHRFDHHCVWVNNCIGAWNTRYFLSY-LFTLTASAATMAVVSTVFLVRLVVMSDVYLQ 228

Query: 244 TVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTN 303
           T    + +        +VQ+L  ++   + L+ F+ V+S LL  +  +   L  TN TTN
Sbjct: 229 TYVDDLGHLQVVDTVFLVQYLFLTFPRIVFLVGFVVVLSFLLGGYLCFCLYLAATNQTTN 288

Query: 304 ETVK----WQDHMNWLRKVNEARASAAALKASIN 333
           E  K    W  H       + AR  AA  +A  N
Sbjct: 289 EWYKGDRAWCQHCP-----HVARPPAAEPQAYRN 317

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NPG8|ZDHC4_HUMAN Probable palmitoyltransferase ZDHHC4 OS=Homo sapiens GN=ZDHHC4 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 124 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSIC 182
           G+ +FFF LT   +PG +   N   +   Y +D +++ +   CSTC + KPARSKHCS+C
Sbjct: 109 GVNLFFFTLTCGTNPGIITKANELLFLHVYEFDEVMFPKNVRCSTCDLRKPARSKHCSVC 168

Query: 183 NRCVARFDHHCGWMNNCIGERNTRYFMAFLL-WHLFLCLYGIVALGFVLAGRLKELRVVY 241
           N CV RFDHHC W+NNCIG  N RYF+ ++L          IV+  F++   L  +  +Y
Sbjct: 169 NWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAIVSTTFLV--HLVVMSDLY 226

Query: 242 ILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTT 301
             T    + +        ++Q+L  ++   + ++ F+ V+S LL  +  +   L  TN T
Sbjct: 227 QETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFVLYLAATNQT 286

Query: 302 TNE 304
           TNE
Sbjct: 287 TNE 289

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6BP23|SWF1_DEBHA Palmitoyltransferase SWF1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SWF1 PE=3 SV=1

 Score =  111 bits (278), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 36/305 (11%)

Query: 12  LLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDY--FLRFVGS-VFGEKAINAILSV 68
           LL+ +++   + G  P F  TPI ++   +    +D   ++ +V S VFG K +      
Sbjct: 13  LLSAILISIVIFGNSPNFRNTPIYKLRLKILRWNHDIIAWINYVDSHVFGNKLV------ 66

Query: 69  EYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYL-SGFHRSSRYTSLLGVGIGV 127
                     ++ + Y+ ++    +      +  +P +   SGFH +    ++L + I  
Sbjct: 67  -----FYSGWLVPLFYIIVVSFCLHQFFTKVYKLLPLFVRKSGFHSTYIAFTILCIFIDT 121

Query: 128 FFFLLTSFADPGTVKAENVSQYQSAYPYDNIIY-TEKECSTCKIPKPARSKHCSICNRCV 186
           F   + +F++PG +   NV +  + +  + +I+  +  CSTC+I KPARSKHCSICN C+
Sbjct: 122 F---MATFSNPGKITTGNVDKVDNFFQNNELIFFADNYCSTCEIIKPARSKHCSICNNCI 178

Query: 187 ARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVY 246
             FDHHC W+NNC+G  N ++FM FL+ ++ L  YG    G++    +   +  +    Y
Sbjct: 179 MLFDHHCIWVNNCVGYYNYKWFMGFLIANINLLGYG----GYLCYQAMSSTKTEFPTLSY 234

Query: 247 YGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFF-GYHANLCRTNTTTNET 305
           +    S                N    +++ L V+ +++A  F G H        TTNE 
Sbjct: 235 WKTIIS------------TNDSNKATGVLLILCVIFIMIAVLFTGLHLRYLYLGVTTNEC 282

Query: 306 VKWQD 310
            KW +
Sbjct: 283 DKWSE 287

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6FXC6|SWF1_CANGA Palmitoyltransferase SWF1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWF1 PE=3 SV=1

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 57/273 (20%)

Query: 125 IGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIY-TEKECSTCKIPKPARSKHCSICN 183
           + +FF  ++    P +  A  +   +  YPYDN++Y  + EC TCK  KPARSKHC++CN
Sbjct: 96  LPLFFGSMSMIIKPDSSNAHQIGS-EKRYPYDNLLYFPQHECRTCKQVKPARSKHCTVCN 154

Query: 184 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 243
            C+   DHHC W+NNC+G  N  YF +FL  +L L  Y  + L F               
Sbjct: 155 SCIYLADHHCVWINNCVGMGNYMYFYSFLCSNLLLLSYSFIRLIF--------------- 199

Query: 244 TVYYGIENSFRKLAPHVVQWLLGSYNTQ-------ILLMVFLAVVSLLLASFFGYHANLC 296
                            +Q+   +YNT        ++L +     +++LA +  +   L 
Sbjct: 200 -----------------IQFNKSAYNTTPTGEKSLLILSILCGSFTVILAVYCYFVFELV 242

Query: 297 RTNTTTNETVKWQDHMNWLRKVNEARASAAA--LKASINGMSSERKPPDSKWKT------ 348
            +  TTNE  KWQ   +++   +  R       +K    G + E    DS   T      
Sbjct: 243 NSGMTTNEKDKWQMVHDYINTGDLVRDPEGKYFIKYQNGGNNYEFYSTDSYDGTQYTIVD 302

Query: 349 -FFRRSPLEDSGAVVKNNIYDKG-ILHNVWEVI 379
            F  +SP E +      NIYDKG  ++N+ E I
Sbjct: 303 YFTVKSPAEIT------NIYDKGNFINNLREFI 329

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
449461076	392	PREDICTED: probable S-acyltransferase At	0.987	0.997	0.762	0.0
356573040	392	PREDICTED: probable S-acyltransferase At	0.989	1.0	0.767	0.0
449506565	392	PREDICTED: LOW QUALITY PROTEIN: probable	0.987	0.997	0.759	0.0
225451106	393	PREDICTED: probable S-acyltransferase At	0.989	0.997	0.779	1e-180
356505896	392	PREDICTED: probable S-acyltransferase At	0.989	1.0	0.752	1e-178
255646844	392	unknown [Glycine max]	0.989	1.0	0.747	1e-177
255542486	393	zinc finger protein, putative [Ricinus c	0.989	0.997	0.769	1e-176
357512111	393	Palmitoyltransferase ZDHHC2 [Medicago tr	0.989	0.997	0.750	1e-174
42563512	397	DHHC-type zinc finger-containing protein	0.946	0.944	0.684	1e-153
297829012	398	zinc finger family protein [Arabidopsis	0.946	0.942	0.685	1e-153

>gi|449461076|ref|XP_004148269.1| PREDICTED: probable S-acyltransferase At3g04970-like [Cucumis sativus]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/395 (76%), Positives = 344/395 (87%), Gaps = 4/395 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG +TLLVVVSFLCGQWPIFEGTPIQRIH+F+T GAYDYFLRFVG +FG K
Sbjct: 1   MAVQWLLLCHGFVTLLVVVSFLCGQWPIFEGTPIQRIHHFITSGAYDYFLRFVGYLFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             NA+L+VE FCCDRPNP+LQ+IYLAIIG+TYY I  S+F Y+PGYYLSG HR   YTS 
Sbjct: 61  GTNAVLAVESFCCDRPNPILQVIYLAIIGVTYYIITMSTFQYVPGYYLSGIHR---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +GV  FLLTSF+DPGTV A+NV++Y SAYPYDNIIY+EKECSTCKIPKPARSKHCS
Sbjct: 118 LAVTVGVLLFLLTSFSDPGTVNADNVTRYLSAYPYDNIIYSEKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG VA+G VLAG+LKEL+V+
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCVYGTVAIGLVLAGQLKELKVI 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           Y+LTVYYGIENSF  LAP+VVQW+LGSYNTQ+LLMVFLA+VSLLL  FFGYHA LC TNT
Sbjct: 238 YVLTVYYGIENSFSGLAPYVVQWILGSYNTQLLLMVFLAIVSLLLGGFFGYHAKLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQ++++W RKVNEA+ASAAALK S++G+SSERKPP+SKW+T FRRS LE    
Sbjct: 298 TTNETFKWQEYLSWQRKVNEAKASAAALKTSMDGLSSERKPPESKWRTIFRRSRLEQV-Q 356

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKS 395
           VVKNN YD+G+LHN+ EVI P S+R SF R K KS
Sbjct: 357 VVKNNTYDRGLLHNIHEVIFPFSSRPSFSRRKPKS 391

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573040|ref|XP_003554673.1| PREDICTED: probable S-acyltransferase At3g04970-like [Glycine max]

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/396 (76%), Positives = 341/396 (86%), Gaps = 4/396 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V+WLL+ HGL+T +VVVSFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVEWLLVCHGLVTAVVVVSFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGPK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             +A+LSVEY+CCDRPNP+LQIIY+ IIG+TYYFIAKS F+YIPGYYLSG HR   YTS 
Sbjct: 61  CTDAVLSVEYYCCDRPNPLLQIIYIVIIGVTYYFIAKSCFAYIPGYYLSGIHR---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +G+  FLLTSF+DPGT+  ENV+ Y SAYPYDNIIY+EKECSTCKIPKPARSKHCS
Sbjct: 118 LAVVVGILLFLLTSFSDPGTINTENVAHYISAYPYDNIIYSEKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGE+NTRYFMAFLLWH  +CLYG VA+  VLAGRL+ELRVV
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGEKNTRYFMAFLLWHFLICLYGTVAIVLVLAGRLRELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
            ILTVYYGIENSF  LAP+VVQWLLGSYNTQILLMVFLA+V +LLA FFGYHA LC TNT
Sbjct: 238 DILTVYYGIENSFLDLAPNVVQWLLGSYNTQILLMVFLAIVGMLLAGFFGYHAKLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQD+M+W RK+ EA  SA ALK SI GMSSE++P  SKW+ FFR+SPLED   
Sbjct: 298 TTNETFKWQDYMDWQRKLKEANVSAEALKQSIGGMSSEKQPLLSKWRAFFRKSPLEDV-V 356

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS 396
           VVKNN+YDKG  HN+ EVISP STRRSF + K KSS
Sbjct: 357 VVKNNVYDKGFFHNIQEVISPFSTRRSFTQNKLKSS 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506565|ref|XP_004162784.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase At3g04970-like [Cucumis sativus]

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/395 (75%), Positives = 343/395 (86%), Gaps = 4/395 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG +TLLVVVSFLCGQWPIFEGTPIQRIH+F+T GAYDYFLRFVG +FG K
Sbjct: 1   MAVQWLLLCHGFVTLLVVVSFLCGQWPIFEGTPIQRIHHFITSGAYDYFLRFVGYLFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             NA+L+VE FCCDRPNP+LQ+IYLAIIG+TYY I  S+F Y+PGYYLSG HR   YTS 
Sbjct: 61  GTNAVLAVESFCCDRPNPILQVIYLAIIGVTYYIITMSTFQYVPGYYLSGIHR---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +GV  FLLTSF+DPGTV A+NV++Y SAYPYDNIIY+EKECSTCKIPKPARSKHCS
Sbjct: 118 LAVTVGVLLFLLTSFSDPGTVNADNVTRYLSAYPYDNIIYSEKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG VA+G VLAG+LKEL+V+
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCVYGTVAIGLVLAGQLKELKVI 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           Y+LTVYYGIENSF  LAP+VVQW+LGSYNTQ+LLMVFLA+VSLLL  FFGYHA LC TNT
Sbjct: 238 YVLTVYYGIENSFSGLAPYVVQWILGSYNTQLLLMVFLAIVSLLLGGFFGYHAKLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQ++++W RKVNEA+ASAAALK S++G+SSERKPP+SKW+T FRRS LE    
Sbjct: 298 TTNETFKWQEYLSWQRKVNEAKASAAALKTSMDGLSSERKPPESKWRTIFRRSRLEQV-Q 356

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKS 395
           VVKNN YD+G+LHN+ EV  P S+R SF R K KS
Sbjct: 357 VVKNNTYDRGLLHNIHEVXFPFSSRPSFSRRKPKS 391

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451106|ref|XP_002266567.1| PREDICTED: probable S-acyltransferase At3g04970 [Vitis vinifera] gi|298205009|emb|CBI34316.3| unnamed protein product [Vitis vinifera]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 308/395 (77%), Positives = 346/395 (87%), Gaps = 3/395 (0%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HGL TLLVVVSFLCGQWPIF+GT I+RIHYF+TFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGLATLLVVVSFLCGQWPIFQGTFIERIHYFITFGAYDYFLRFVGVVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             N ILSVE FCCDRPNP+LQ++YLAIIG TYYFI +S+FSYIPGYY+SG HR   YTSL
Sbjct: 61  GTNVILSVENFCCDRPNPILQVVYLAIIGATYYFIVQSTFSYIPGYYISGVHR---YTSL 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L VG+GV  FLLTSF+DPGTVKAENVS+Y SAYPYDNIIY+EKECSTC+IPKPARSKHCS
Sbjct: 118 LAVGVGVVLFLLTSFSDPGTVKAENVSKYLSAYPYDNIIYSEKECSTCRIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGERNTR+FMAFLLWH  LC+YG VA+G VLAGRLKEL+V+
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGERNTRFFMAFLLWHFLLCIYGTVAIGLVLAGRLKELKVI 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           +ILTVYYGIENSF  LAPHVVQWLLGSYNTQ+LLMVFLA+VSLLLA FF YHANLC TNT
Sbjct: 238 HILTVYYGIENSFASLAPHVVQWLLGSYNTQLLLMVFLAIVSLLLAGFFSYHANLCFTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KW+D++ W +K+NEA+AS AALKA I+G++ ERKPP+SKWK FFRRS LED   
Sbjct: 298 TTNETFKWEDYIRWQQKLNEAKASTAALKAGISGLNCERKPPESKWKAFFRRSRLEDVEP 357

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKS 395
           V KNNIYDKG L N+ E+I P S+R SF + KSKS
Sbjct: 358 VSKNNIYDKGFLRNLHEIIFPLSSRHSFSQAKSKS 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505896|ref|XP_003521725.1| PREDICTED: probable S-acyltransferase At3g04970-like [Glycine max]

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/396 (75%), Positives = 339/396 (85%), Gaps = 4/396 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V+WLL+ HGL+T +VVVSFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVEWLLVCHGLVTAVVVVSFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGPK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             +++LSVEY+CCDRPNP+LQIIY+ IIG+TYYF+AKS F+YIPGYYLSG HR   YTS 
Sbjct: 61  CTDSVLSVEYYCCDRPNPLLQIIYIVIIGVTYYFVAKSCFAYIPGYYLSGIHR---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +G+  FLLTSF+DPGT+  ENVS Y +AYPYDNIIY+EKECSTCKIPKPARSKHCS
Sbjct: 118 LAVAVGILLFLLTSFSDPGTINTENVSHYINAYPYDNIIYSEKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGE+NT+YFMAFLLWH  +CLYG VA+  VLAGRL+ELRVV
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGEKNTQYFMAFLLWHFLICLYGTVAIVLVLAGRLRELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
            ILTVYYGIENSF  LAP+VVQWLLGSYNTQILLMVFLA+V +LLA FFGYHA LC TNT
Sbjct: 238 DILTVYYGIENSFLDLAPNVVQWLLGSYNTQILLMVFLAIVGMLLAGFFGYHAKLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQD+M+W RK+ EA+ SA ALK SI GMS E++P  SK + FFR+SPLED   
Sbjct: 298 TTNETFKWQDYMDWQRKLKEAKVSAEALKQSIGGMSGEKQPLLSKCRAFFRKSPLEDV-V 356

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS 396
           VVKNN+YDKG   N+ EVISP STRRSF + K KSS
Sbjct: 357 VVKNNVYDKGFFLNIQEVISPFSTRRSFTQNKLKSS 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646844|gb|ACU23893.1| unknown [Glycine max]

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/396 (74%), Positives = 337/396 (85%), Gaps = 4/396 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V+WLL+ HGL+T +VVVSFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVEWLLVCHGLVTAVVVVSFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGPK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             +++LSVEY+CCDRPNP+LQIIY+ IIG+TYYF+AKS F+YIPGYYLSG HR   YTS 
Sbjct: 61  CTDSVLSVEYYCCDRPNPLLQIIYIVIIGVTYYFVAKSCFAYIPGYYLSGIHR---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +G+  FLLTSF+DPGT+  ENVS Y +AYPYDNIIY+EKECSTCKIPKPARSKHCS
Sbjct: 118 LAVAVGILLFLLTSFSDPGTINTENVSHYINAYPYDNIIYSEKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGE+NT+YFMAFLLWH  +CLYG VA+  VLAGRL+ELRVV
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGEKNTQYFMAFLLWHFLICLYGTVAIVLVLAGRLRELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
            IL VYYGIENSF  L P+VVQWLLGSYNTQILLMVFLA+V +LLA FFGYHA LC TNT
Sbjct: 238 DILIVYYGIENSFLDLVPNVVQWLLGSYNTQILLMVFLAIVGMLLAGFFGYHAKLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQD+M+W RK+ EA+ SA ALK SI GMS E++P  SK + FFR+SPLED   
Sbjct: 298 TTNETFKWQDYMDWQRKLKEAKVSAEALKQSIGGMSGEKQPLLSKCRAFFRKSPLEDV-V 356

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS 396
           VVKNN+YDKG   N+ EVISP STRRSF + K KSS
Sbjct: 357 VVKNNVYDKGFFLNIQEVISPFSTRRSFTQNKLKSS 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542486|ref|XP_002512306.1| zinc finger protein, putative [Ricinus communis] gi|223548267|gb|EEF49758.1| zinc finger protein, putative [Ricinus communis]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 304/395 (76%), Positives = 345/395 (87%), Gaps = 3/395 (0%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M+V+W+L+ HGL+TL++VV+FLCGQWPIF+GTPI+R+HYF+TFGAYD FLR V  VFG K
Sbjct: 1   MEVEWVLVCHGLITLIIVVAFLCGQWPIFQGTPIERLHYFITFGAYDRFLRGVAVVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             + +LS+E+F CDRPNP+LQIIYLAIIG TYYFIA SSFSYIPGYYLSG HR   Y SL
Sbjct: 61  GTHFVLSIEHFFCDRPNPILQIIYLAIIGATYYFIATSSFSYIPGYYLSGVHR---YISL 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +GV  FLLTSF+DPGTVK+ENVS+Y SAYPYD+IIYTEKECSTCK  KPARSKHCS
Sbjct: 118 LAVVVGVVLFLLTSFSDPGTVKSENVSEYLSAYPYDDIIYTEKECSTCKFRKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGE+NTRYF+AFLLWH  LC+YG +ALG VLAGRLKELRVV
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGEKNTRYFLAFLLWHFLLCVYGTIALGLVLAGRLKELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           YILTVYYGIENSFR LAPHVVQWLLGSYNTQILLMVFLA+VSLLLA FFGYHANLC TNT
Sbjct: 238 YILTVYYGIENSFRSLAPHVVQWLLGSYNTQILLMVFLAIVSLLLAGFFGYHANLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTFFRRSPLEDSGA 360
           TTNET KWQ+++ W RK+NEAR SAAALKASI+GMS E K P+SK + FFRRSPLE +  
Sbjct: 298 TTNETFKWQEYIGWQRKLNEARTSAAALKASISGMSGEAKHPESKCRAFFRRSPLEGAEV 357

Query: 361 VVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKS 395
           V+K N+YDKGI +N+ E+I P STR SFLR KSKS
Sbjct: 358 VIKRNMYDKGIFNNLGEIIFPLSTRPSFLRKKSKS 392

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512111|ref|XP_003626344.1| Palmitoyltransferase ZDHHC2 [Medicago truncatula] gi|355501359|gb|AES82562.1| Palmitoyltransferase ZDHHC2 [Medicago truncatula]

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 298/397 (75%), Positives = 340/397 (85%), Gaps = 5/397 (1%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V  LL+ HGL+T LVV+SFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVGLLLVCHGLVTALVVISFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             NA+LSVEY+CCDRPNP+LQIIYL II  TYYF   SSF+YIPGYYLS  H+   YTS 
Sbjct: 61  CTNAVLSVEYYCCDRPNPLLQIIYLVIISFTYYFAVNSSFAYIPGYYLSATHK---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
               +G+  FLLTSF DPGT+KAENVSQY +AYPYDNII+++KECSTCKIPKPARSKHCS
Sbjct: 118 FAAAVGILLFLLTSFTDPGTIKAENVSQYLAAYPYDNIIFSKKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           IC+RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG V +G +LAGRLKEL+VV
Sbjct: 178 ICDRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCMYGTVLIGLILAGRLKELKVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           YILTVYYGIENSF  LAPHVVQWLLGSYNTQILL+VF+A+V +LL  FFGYHA LC +NT
Sbjct: 238 YILTVYYGIENSFWDLAPHVVQWLLGSYNTQILLIVFVAIVGMLLGGFFGYHAKLCLSNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDS-KWKTFFRRSPLEDSG 359
           TTNET KWQD+MNW RK+ EA+ASAAALK SI+GM+SE++   S KW+ FFRRSPLED  
Sbjct: 298 TTNETFKWQDYMNWQRKLKEAQASAAALKQSISGMNSEKQSLSSNKWRAFFRRSPLEDV- 356

Query: 360 AVVKNNIYDKGILHNVWEVISPPSTRRSFLRTKSKSS 396
            VVKNN+Y+KG LHN+WE+ISP STR+SF +TK KS+
Sbjct: 357 VVVKNNVYNKGFLHNIWEIISPLSTRQSFTQTKLKSN 393

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563512|ref|NP_187148.2| DHHC-type zinc finger-containing protein [Arabidopsis thaliana] gi|122214962|sp|Q3EBC2.1|ZDHC5_ARATH RecName: Full=Probable S-acyltransferase At3g04970; AltName: Full=Probable palmitoyltransferase At3g04970; AltName: Full=Zinc finger DHHC domain-containing protein At3g04970 gi|332640648|gb|AEE74169.1| DHHC-type zinc finger-containing protein [Arabidopsis thaliana]

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/387 (68%), Positives = 311/387 (80%), Gaps = 12/387 (3%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+   YTS 
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHK---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCS
Sbjct: 118 LAVIVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           ICNRCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV
Sbjct: 178 ICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           +ILTVYYG++ SFR LAP V+QWL+G+YNTQILLMVFLA+VSLLLA FF YHANLC TNT
Sbjct: 238 HILTVYYGVDKSFRSLAPRVIQWLVGTYNTQILLMVFLAIVSLLLAGFFAYHANLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTF---FRRSPLED 357
           TTNET KW+++++  +K      + A+  A   GMS E K P ++ K F    R S  E+
Sbjct: 298 TTNETFKWREYISLNKK---LSEAKASAAALKAGMSCELKKPSAESKCFGLCGRSSAREE 354

Query: 358 ---SGAVVKNNIYDKGILHNVWEVISP 381
              + A+ K N+YD+G   NV E++ P
Sbjct: 355 EVKADAIAKRNLYDRGSFQNVSEIVFP 381

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829012|ref|XP_002882388.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297328228|gb|EFH58647.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/388 (68%), Positives = 311/388 (80%), Gaps = 13/388 (3%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYF+TFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFITFGAYDYFLRFVGLVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYY+   H+   YTS 
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYIGDVHK---YTSF 117

Query: 121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
           L V +G   FLLTSF+DPGTV AENVSQY SAYPYD+IIY++KECSTCKIPKPARSKHCS
Sbjct: 118 LTVIVGAILFLLTSFSDPGTVNAENVSQYISAYPYDDIIYSKKECSTCKIPKPARSKHCS 177

Query: 181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
           ICNRCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV
Sbjct: 178 ICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVV 237

Query: 241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNT 300
           +ILTVYYG++ SFR LAP V+QWL+G+YNTQILLMVFLA+VSLLLA FF YHANLC TNT
Sbjct: 238 HILTVYYGVDKSFRSLAPRVLQWLVGTYNTQILLMVFLAIVSLLLAGFFAYHANLCLTNT 297

Query: 301 TTNETVKWQDHMNWLRKVNEARASAAALKASINGMSSERKPPDSKWKTF--FRRSPLEDS 358
           TTNET KW+++++ L+K      + A+  A   GMS E K P +  K F    RS   + 
Sbjct: 298 TTNETFKWREYIS-LKK--RLSEAKASAAALKAGMSCESKKPTAASKCFGICGRSSAHEE 354

Query: 359 G-----AVVKNNIYDKGILHNVWEVISP 381
           G     A+VK N+YD+G   NV E++ P
Sbjct: 355 GKAKAEAIVKRNLYDRGSFQNVSEIVFP 382

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
TAIR|locus:2114895	397	AT3G04970 [Arabidopsis thalian	0.982	0.979	0.614	4.8e-133
DICTYBASE|DDB_G0283039	446	DDB_G0283039 "Probable palmito	0.537	0.477	0.370	2.4e-50
POMBASE|SPBC13G1.07	356	swf1 "palmitoyltransferase Swf	0.525	0.584	0.35	3.4e-32
ZFIN|ZDB-GENE-030131-9031	345	zdhhc4 "zinc finger, DHHC-type	0.449	0.515	0.363	4.1e-28
UNIPROTKB|G4NEA7	422	MGG_00810 "Palmitoyltransferas	0.699	0.656	0.256	5.6e-28
RGD|1308389	343	Zdhhc4 "zinc finger, DHHC-type	0.686	0.793	0.305	8.4e-28
UNIPROTKB|Q5FVR1	343	Zdhhc4 "Probable palmitoyltran	0.686	0.793	0.305	8.4e-28
UNIPROTKB|Q9NPG8	344	ZDHHC4 "Probable palmitoyltran	0.376	0.433	0.391	1.1e-27
SGD|S000002533	336	SWF1 "Palmitoyltransferase tha	0.270	0.318	0.451	2.3e-27
UNIPROTKB|Q58DT3	343	ZDHHC4 "Probable palmitoyltran	0.616	0.711	0.300	9.4e-27

TAIR|locus:2114895 AT3G04970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1304 (464.1 bits), Expect = 4.8e-133, P = 4.8e-133
 Identities = 247/402 (61%), Positives = 291/402 (72%)

Query:     1 MDVQWXXXXXXXXXXXXXXSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
             M VQW              SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct:     1 MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query:    61 AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSL 120
               + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+   YTS 
Sbjct:    61 GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHK---YTSF 117

Query:   121 LGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCS 180
             L V +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCS
Sbjct:   118 LAVIVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCS 177

Query:   181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV 240
             ICNRCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV
Sbjct:   178 ICNRCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVV 237

Query:   241 YILTVYYGIENSFRKLAPHVVQWLLGSYNTQIXXXXXXXXXXXXXXXXXGYHANLCRTNT 300
             +ILTVYYG++ SFR LAP V+QWL+G+YNTQI                  YHANLC TNT
Sbjct:   238 HILTVYYGVDKSFRSLAPRVIQWLVGTYNTQILLMVFLAIVSLLLAGFFAYHANLCLTNT 297

Query:   301 TTNETVKWQDHMNWLRKVNEXXXXXXXXXXSINGMSSERKPPDSKWKTFF---RRSPLED 357
             TTNET KW+++++  +K++E             GMS E K P ++ K F    R S  E+
Sbjct:   298 TTNETFKWREYISLNKKLSEAKASAAALKA---GMSCELKKPSAESKCFGLCGRSSAREE 354

Query:   358 ---SGAVVKNNIYDKGILHNVWEVISPPSTRRSFL-RTKSKS 395
                + A+ K N+YD+G   NV E++ P S+R S   ++K KS
Sbjct:   355 EVKADAIAKRNLYDRGSFQNVSEIVFPLSSRPSSSNKSKRKS 396

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0283039 DDB_G0283039 "Probable palmitoyltransferase ZDHHC4" [Dictyostelium discoideum (taxid:44689)]

 Score = 421 (153.3 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
 Identities = 80/216 (37%), Positives = 117/216 (54%)

Query:    20 SFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPV 79
             + L GQ        +  ++ FLT G  D+ + F      +K  N   S   +   +PN +
Sbjct:    21 TLLLGQSEFHRDGCVGSLYIFLTSGLQDWCVGFFARCCPKKLKNGSASCYNYFMYKPNRI 80

Query:    80 LQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPG 139
             LQ  YL ++   +YF     F YI G Y+S  H+   Y +   +   +F F+L+S + PG
Sbjct:    81 LQGFYLTLVLSGFYFFYFDCFPYIGGPYISSNHK---YGAFFAISFTLFTFVLSSNSTPG 137

Query:   140 TVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNC 199
              +   N   ++++YPYD  +Y +K C +C   KPARSKHC IC+RCV RFDHHC W+NNC
Sbjct:   138 YINDSNYKLFKNSYPYDRYLYIKKNCESCNFIKPARSKHCRICDRCVGRFDHHCPWINNC 197

Query:   200 IGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLK 235
             +GE N RYF+ F+     LC+YG    GF +   +K
Sbjct:   198 VGENNLRYFLLFVFSTSMLCMYGAYLCGFSMYSFMK 233

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

POMBASE|SPBC13G1.07 swf1 "palmitoyltransferase Swf1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 323 (118.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 77/220 (35%), Positives = 120/220 (54%)

Query:    22 LCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAIL-SVEYFCCDRPNPVL 80
             L GQ P  + T I +++ F       Y L  + S + +   +A + S+  +   + NP++
Sbjct:    22 LFGQIPKLKYTVIGKLNRFFMV-TIPYHLHVLDSRYADGRCSAAMRSLSNYVLYKNNPLV 80

Query:    81 QIIYLAII--GITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADP 138
               +YLA+I  GI  +FI  SS +       S     S  TS+L   I ++   + + ++P
Sbjct:    81 VFLYLALITIGIASFFIYGSSLTQ----KFSIIDWISVLTSVLLPYISLY---IAAKSNP 133

Query:   139 GTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNN 198
             G +  +N ++    +PYD  I+   +CSTCK  KPARSKHC +CN CV +FDHHC W+NN
Sbjct:   134 GKIDLKNWNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFDHHCIWINN 193

Query:   199 CIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELR 238
             C+G  N RYF  FLL  + L  + I+ LG+     L+++R
Sbjct:   194 CVGLNNARYFFLFLLCTIQLLFHSILRLGYHF-NALRDMR 232

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=ISO

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030100 "regulation of endocytosis" evidence=ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0090002 "establishment of protein localization to plasma membrane" evidence=IC

ZFIN|ZDB-GENE-030131-9031 zdhhc4 "zinc finger, DHHC-type containing 4" [Danio rerio (taxid:7955)]

 Score = 289 (106.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
 Identities = 68/187 (36%), Positives = 100/187 (53%)

Query:   129 FFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTE-KECSTCKIPKPARSKHCSICNRCVA 187
             F+L  S  DPGT+   N+S +   Y YD  ++ +  +CSTC++ KPARSKHC +CNRCV 
Sbjct:   117 FYLCCS-RDPGTLTKSNLSAHLKIYQYDEKLFQQGMKCSTCQLIKPARSKHCRVCNRCVQ 175

Query:   188 RFDHHCGWMNNCIGERNTRYFMAFLLWHLFLC-LYGIVALGFVLAGRLKELRVVYILTVY 246
             RFDHHC W+NNCIG +NTRYFM +LL    +C + G +A+       L+ +    +L  +
Sbjct:   176 RFDHHCVWVNNCIGAQNTRYFMLYLL---SVCAMAGNIAV-LTTDMLLQTVLRTGLLHAH 231

Query:   247 YGIENSFRKLA-P-HVVQWLLGSYNTQIXXXXXXXXXXXXXXXXXGYHANLCRTNTTTNE 304
             Y  E   ++ A P  ++Q L  ++   +                  +H  L   N T+NE
Sbjct:   232 YIDEQGIQQPAGPLFIIQHLFLTFPRIVFMLGFLVFVFFLLAGYCLFHFYLVLVNQTSNE 291

Query:   305 TVKWQDH 311
               K + H
Sbjct:   292 WFKAKGH 298

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G4NEA7 MGG_00810 "Palmitoyltransferase SWF1" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 282 (104.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
 Identities = 75/292 (25%), Positives = 128/292 (43%)

Query:    24 GQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQII 83
             G+ P+F  TP+  +H  L        L     +   K  ++++    F  +  +P + I 
Sbjct:    24 GRLPMFRHTPVSWLHRLLWVYIPRGVLALDQKLTSGKFGSSLMRFGRFMMNDRHPTVMIF 83

Query:    84 YLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLL--TSFADPGTV 141
             +  I+ I+       ++S +          ++    +L   + + ++ L   ++ DPG +
Sbjct:    84 FFLILAISESAALPKAWSQL----------TTMQQIILATSVFLPYYTLYKAAYTDPGYI 133

Query:   142 KAENVSQYQSAYPYD-NIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCI 200
               +N   + +AYPYD  I +    C TC + KP RSKHCSIC  C+ R DHHC ++N+C+
Sbjct:   134 TGDNHRAHMAAYPYDFTIFHPGSSCRTCGLLKPPRSKHCSICKHCIGRMDHHCIFINSCV 193

Query:   201 GERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHV 260
             G  N  +F+  LL   FLCLYG V    ++   ++     + +  + G       L  + 
Sbjct:   194 GAGNAHWFLLLLLSTAFLCLYGGVLCMSLIVRSIRRRAPGFEVLWWRGNFGDGMDLNSYF 253

Query:   261 VQWLLG-SYNTQIXXXXXXXXXXXXXX-XXXGYHANLCRTNTTTNETVKWQD 310
             V W  G +   Q+                  GY+        TTNE++KW D
Sbjct:   254 VLWSWGIADQVQLGAVGLLAILCSPLVWGLFGYNMWNVWGGVTTNESLKWSD 305

GO:0008150 "biological_process" evidence=ND

RGD|1308389 Zdhhc4 "zinc finger, DHHC-type containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 282 (104.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 88/288 (30%), Positives = 128/288 (44%)

Query:    32 TPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGIT 91
             T  QR+   +  GA     R     F ++A+  +L  + F     +P    ++L + G+ 
Sbjct:    25 TKSQRLKAVVLGGA-QVCARVTPQCF-QRAVQTLLH-QLF--HTRHPAFLALHLLLQGLV 79

Query:    92 YYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQS 151
             Y       FSY      S       Y  LL V +   FF LT   +PGT+   NV     
Sbjct:    80 YAEYTYEVFSYCRELEFSLPCLLLPYV-LLSVNL--VFFTLTCSTNPGTITKTNVLLLLQ 136

Query:   152 AYPYDNIIYTEKE-CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMA 210
              Y +D +++ +   CSTC + KPARSKHC +C+RCV RFDHHC W+NNCIG  NT YF+ 
Sbjct:   137 VYEFDEVMFPKNSRCSTCDLRKPARSKHCRVCDRCVHRFDHHCVWVNNCIGAWNTGYFLI 196

Query:   211 FLLW-HLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKL-APHVVQWLLGSY 268
             +LL          I++  F+L  RL  +  +Y  T Y      F+ +    ++Q L  ++
Sbjct:   197 YLLTLTASAATIAILSAAFLL--RLVAVSNLYQET-YLDDLGRFQAVDTGFLIQHLFLAF 253

Query:   269 NTQIXXXXXXXXXXXXXXXXXGYHANLCRTNTTTNETVK--WQDHMNW 314
                I                  +   L  TN TTNE  +  W    +W
Sbjct:   254 PRIIFLLGFVIVLSLLLAGYLCFALYLAATNQTTNEWYRGDWAWCQHW 301

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

UNIPROTKB|Q5FVR1 Zdhhc4 "Probable palmitoyltransferase ZDHHC4" [Rattus norvegicus (taxid:10116)]

 Score = 282 (104.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 88/288 (30%), Positives = 128/288 (44%)

Query:    32 TPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGIT 91
             T  QR+   +  GA     R     F ++A+  +L  + F     +P    ++L + G+ 
Sbjct:    25 TKSQRLKAVVLGGA-QVCARVTPQCF-QRAVQTLLH-QLF--HTRHPAFLALHLLLQGLV 79

Query:    92 YYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQS 151
             Y       FSY      S       Y  LL V +   FF LT   +PGT+   NV     
Sbjct:    80 YAEYTYEVFSYCRELEFSLPCLLLPYV-LLSVNL--VFFTLTCSTNPGTITKTNVLLLLQ 136

Query:   152 AYPYDNIIYTEKE-CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMA 210
              Y +D +++ +   CSTC + KPARSKHC +C+RCV RFDHHC W+NNCIG  NT YF+ 
Sbjct:   137 VYEFDEVMFPKNSRCSTCDLRKPARSKHCRVCDRCVHRFDHHCVWVNNCIGAWNTGYFLI 196

Query:   211 FLLW-HLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKL-APHVVQWLLGSY 268
             +LL          I++  F+L  RL  +  +Y  T Y      F+ +    ++Q L  ++
Sbjct:   197 YLLTLTASAATIAILSAAFLL--RLVAVSNLYQET-YLDDLGRFQAVDTGFLIQHLFLAF 253

Query:   269 NTQIXXXXXXXXXXXXXXXXXGYHANLCRTNTTTNETVK--WQDHMNW 314
                I                  +   L  TN TTNE  +  W    +W
Sbjct:   254 PRIIFLLGFVIVLSLLLAGYLCFALYLAATNQTTNEWYRGDWAWCQHW 301

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9NPG8 ZDHHC4 "Probable palmitoyltransferase ZDHHC4" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 61/156 (39%), Positives = 87/156 (55%)

Query:    59 EKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYT 118
             ++A++ +L   Y    R N    +++L + G+ Y       F Y     LS  +    Y 
Sbjct:    50 QRAVHGLL--HYLFHTR-NHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYL 106

Query:   119 SLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSK 177
              LLGV +  FFF LT   +PG +   N   +   Y +D +++ +   CSTC + KPARSK
Sbjct:   107 -LLGVNL--FFFTLTCGTNPGIITKANELLFLHVYEFDEVMFPKNVRCSTCDLRKPARSK 163

Query:   178 HCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 213
             HCS+CN CV RFDHHC W+NNCIG  N RYF+ ++L
Sbjct:   164 HCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVL 199

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

SGD|S000002533 SWF1 "Palmitoyltransferase that acts on transmembrane proteins" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 253 (94.1 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
 Identities = 51/113 (45%), Positives = 68/113 (60%)

Query:   142 KAENVSQYQSA----YPYDNIIYTEK-ECSTCKIPKPARSKHCSICNRCVARFDHHCGWM 196
             +AE+   ++S     YPYD ++Y    +CSTC+I KPARSKHCSICNRCV   DHHC W+
Sbjct:   108 RAEDSKDHKSGSTEEYPYDYLLYYPAIKCSTCRIVKPARSKHCSICNRCVLVADHHCIWI 167

Query:   197 NNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKEL-RVVYILTVYYG 248
             NNCIG+ N   F  FL+ ++F   Y  + L ++       L R V  LT+  G
Sbjct:   168 NNCIGKGNYLQFYLFLISNIFSMCYAFLRLWYISLNSTSTLPRAVLTLTILCG 220

GO:0018345 "protein palmitoylation" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA;ISM;ISS

GO:0017157 "regulation of exocytosis" evidence=IMP

GO:0016409 "palmitoyltransferase activity" evidence=ISS;IMP

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0032432 "actin filament bundle" evidence=IDA

GO:0030479 "actin cortical patch" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0030866 "cortical actin cytoskeleton organization" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IMP

GO:0030476 "ascospore wall assembly" evidence=IMP

GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane network" evidence=IDA

GO:0042144 "vacuole fusion, non-autophagic" evidence=IGI

UNIPROTKB|Q58DT3 ZDHHC4 "Probable palmitoyltransferase ZDHHC4" [Bos taurus (taxid:9913)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 76/253 (30%), Positives = 117/253 (46%)

Query:    64 AILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGV 123
             A+LSV ++     N    +++L + G+ Y       F        S ++    Y  L+  
Sbjct:    52 AMLSVLHYLFHTRNYTFVVLHLILQGMVYTEYTWEIFGLCQQLEFSLYYLFLPYLLLI-- 109

Query:   124 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSIC 182
              + + FF L+   +PGT+   N   +   Y +D +++ +   C TC + KPARSKHCS+C
Sbjct:   110 -VNLLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRKPARSKHCSVC 168

Query:   183 NRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYI 242
             NRCV RFDHHC W+NNCIG  NTRYF+++L + L      +  +  V   RL  +  VY+
Sbjct:   169 NRCVHRFDHHCVWVNNCIGAWNTRYFLSYL-FTLTASAATMAVVSTVFLVRLVVMSDVYL 227

Query:   243 LTVYYGIENSFRKLAPHVVQWLLGSYNTQIXXXXXXXXXXXXXXXXXGYHANLCRTNTTT 302
              T    + +        +VQ+L  ++   +                  +   L  TN TT
Sbjct:   228 QTYVDDLGHLQVVDTVFLVQYLFLTFPRIVFLVGFVVVLSFLLGGYLCFCLYLAATNQTT 287

Query:   303 NETVK----WQDH 311
             NE  K    W  H
Sbjct:   288 NEWYKGDRAWCQH 300

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3EBC2	ZDHC5_ARATH	2, ., 3, ., 1, ., -	0.6847	0.9469	0.9445	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006114001 SubName- Full=Chromosome chr14 scaffold_164, whole genome shotgun sequence; (393 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	396
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	1e-42
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	8e-25

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  146 bits (371), Expect = 1e-42
 Identities = 61/188 (32%), Positives = 83/188 (44%), Gaps = 26/188 (13%)

Query: 127 VFFFLLTSFADPGTVKAENVS-----QYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSI 181
           ++ +  T F DPG V           Q        +     K CSTC I KP RS HC +
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRV 60

Query: 182 CNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVY 241
           CNRCV RFDHHC W+NNCIG RN +YF+ FLL+     +  +V                 
Sbjct: 61  CNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVL---------------S 105

Query: 242 ILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTT 301
              + Y I N        +  +L+ S  + I+L+V      L L+    +H  L   N T
Sbjct: 106 FYYLVYLIRNI------ELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNIT 159

Query: 302 TNETVKWQ 309
           T E +K +
Sbjct: 160 TYEYIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  102 bits (257), Expect = 8e-25
 Identities = 61/209 (29%), Positives = 86/209 (41%), Gaps = 33/209 (15%)

Query: 94  FIAKSSFSYIPGYYLSGFHRS------SRYTSLLGVGIGVFFFLLTSFADPGTVKAEN-V 146
           FI     S I  Y L    +S           ++ + +  F +LL   +DPG +     +
Sbjct: 31  FIGLFLLSRIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITL 90

Query: 147 SQYQ---SAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGER 203
           S Y+   S    D    TE  CSTC I KP RS HCSICNRCV +FDHHC W+NNC+G R
Sbjct: 91  SGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFR 150

Query: 204 NTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQW 263
           N R+F  FLL+ + + L                  V+     Y     S R      + +
Sbjct: 151 NYRFFYQFLLYTILVALV-----------------VLLSTAYYIAGIFSIRHDTSLAICF 193

Query: 264 LLGSYNTQILLMVFLAVVSLLLASFFGYH 292
           L+          +   V  ++      + 
Sbjct: 194 LIFG------CSLLGVVFFIITTLLLLFL 216

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	396
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	99.98
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.95
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	89.58
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	87.83
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	85.31
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	80.53
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	80.35

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=5.2e-61  Score=442.65  Aligned_cols=287  Identities=39%  Similarity=0.614  Sum_probs=234.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHhcCCCCccCChhhHHHHHHHhhhhhhHHhhhhhhccchhhhhhhhccceeeccCCCcc
Q 016042            1 MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVL   80 (396)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~lfG~~p~~r~t~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~   80 (396)
                      ||++|++++|+..++++|+++|||+.|.|++||+ |.|+++..++|+++.+.|++.+        .+...++++.+||.+
T Consensus         1 Mdf~wllLf~lai~l~vVlilLcgq~p~lKgt~~-w~~~ff~~~ip~~llr~v~~y~--------~sl~~~~l~~tni~L   71 (341)
T KOG1312|consen    1 MDFLWLLLFYLAIVLGVVLILLCGQTPSLKGTAR-WGAQFFSCIIPECLLRAVHGYL--------RSLLFHTLNHTNIVL   71 (341)
T ss_pred             CchhHHHHHHHHHHHHHhhhhhcCCCcccccccc-cceeeEEECccHHHHHHHHHHH--------HHheeeeccCCChhH
Confidence            9999999999999999999999999999999999 9999999999999999998654        457788999999999


Q ss_pred             eeehhhhhhhhhhhhHhhhccccccccccccccchhHHHHHHHHHHHHHhHHhhccCCCcccCCCcccccccCCCCcccc
Q 016042           81 QIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIY  160 (396)
Q Consensus        81 ~i~yl~l~~~~~~~f~~~~~~~ip~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~DPG~i~~~~~~~~~~~~p~d~~~~  160 (396)
                      +++|.+++..   ...+..|-+.|.++++..+   ++....+++++++++.+++.+|||.++++|..+..+.||||..++
T Consensus        72 ~lvy~a~m~~---~~~~esfiy~~~l~lsl~~---~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if  145 (341)
T KOG1312|consen   72 HLVYQAMMYT---EYTWESFIYCQELELSLHY---LILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIF  145 (341)
T ss_pred             HHHHHHHHhh---hhhheeeEeccchhhhHHH---HHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceee
Confidence            9999998874   3345566677888888888   888888999999999999999999999999999999999999999


Q ss_pred             cc-ccccccCCCCCCCCccccccCccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhh
Q 016042          161 TE-KECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFV-LAGRLKELR  238 (396)
Q Consensus       161 ~~-~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~-l~~~~~~~~  238 (396)
                      .+ +.|+||++.||+||||||+|||||.||||||.|+|||||++|+|||++||+++..++.|+.+..+++ +....+..+
T Consensus       146 ~k~~kCSTCki~KPARSKHCsiCNrCV~rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi~ln~~sdl~q  225 (341)
T KOG1312|consen  146 PKNVKCSTCKIRKPARSKHCSICNRCVHRFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFIVLNVMSDLYQ  225 (341)
T ss_pred             cCCCccccccCCCccccccchHHHHHHHHhccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHheehhhccccch
Confidence            88 9999999999999999999999999999999999999999999999999999999999998888776 555555555


Q ss_pred             eeeeeeeeecccccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016042          239 VVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVK  307 (396)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k  307 (396)
                      ...+++.+++...+...+.+.    ++......++.+-+....+ ++++...+-+|+-++|+||+|...
T Consensus       226 ~v~ilt~~~g~~ks~~~L~~y----l~la~~~~v~~l~~~~~~~-~~~~Y~~f~~y~~~t~~~~~~W~~  289 (341)
T KOG1312|consen  226 EVYILTLGHGHVKSTVFLIQY----LFLAFPRIVFMLGFVVVLS-FLGGYLLFVLYLAATNQTTNEWYR  289 (341)
T ss_pred             heeeeeeeecchhhHHHHHHH----HHHHhccceeeeehhhhhh-HhHHHHHHHHHHHhccCCchhhhc
Confidence            666666666554443322222    1111111111111222222 256666677788888888887543

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.9e-40  Score=318.20  Aligned_cols=210  Identities=28%  Similarity=0.420  Sum_probs=145.3

Q ss_pred             CcceeehhhhhhhhhhhhHhhhc-cccccccccccccchhHHHHHHHHHHHHHhHHhhccCCCcccCCCcccccc-cCCC
Q 016042           78 PVLQIIYLAIIGITYYFIAKSSF-SYIPGYYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQS-AYPY  155 (396)
Q Consensus        78 p~~~i~yl~l~~~~~~~f~~~~~-~~ip~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~DPG~i~~~~~~~~~~-~~p~  155 (396)
                      +.++++++.+++++|++++.... ..+.   .........+....+.++..++|+.+.++|||.+|.+...+..+ +.+.
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~---~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~   89 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSIS---LTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLE   89 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHh---hhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCcccccc
Confidence            77778888888899988874421 1110   10111111334445666777889999999999999754332211 1111


Q ss_pred             -------Cc------cccccccccccCCCCCCCCccccccCccccccccccccccccccccchhhhHHHHHHHHHHHHHH
Q 016042          156 -------DN------IIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYG  222 (396)
Q Consensus       156 -------d~------~~~~~~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~  222 (396)
                             +.      .....|+|.+|+.+||+||||||+|+|||+||||||||+|||||.+|||+|++||+|+.+.++|.
T Consensus        90 ~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~  169 (307)
T KOG1315|consen   90 NGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYV  169 (307)
T ss_pred             ccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHH
Confidence                   11      11245899999999999999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHHhhhhheeeeeeeeecccccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 016042          223 IVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTT  302 (396)
Q Consensus       223 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~~~hl~li~~n~TT  302 (396)
                      ++.....+....+....                  +..     .......++.++...+++.+.+|+++|++||++|+||
T Consensus       170 lv~~~~~~~~~~~~~~~------------------~~~-----~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TT  226 (307)
T KOG1315|consen  170 LVTTLIGFTKYFQGGAG------------------PSS-----LLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTT  226 (307)
T ss_pred             HHHHHHHHHHHHhcccc------------------Cch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchh
Confidence            77665544332211000                  000     0011223334444567778888999999999999999


Q ss_pred             cccccchhhhH
Q 016042          303 NETVKWQDHMN  313 (396)
Q Consensus       303 ~E~~k~~~~~~  313 (396)
                      .|.+++..+..
T Consensus       227 iE~~~~~~~~~  237 (307)
T KOG1315|consen  227 IEAYKSPVFRS  237 (307)
T ss_pred             Hhhhccccccc
Confidence            99999886543

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=3.1e-39  Score=314.78  Aligned_cols=169  Identities=34%  Similarity=0.627  Sum_probs=114.7

Q ss_pred             HHHHHHHHHhHHhhcc---CCCcccCCC--cccccccCC------CCccccccccccccCCCCCCCCccccccCcccccc
Q 016042          121 LGVGIGVFFFLLTSFA---DPGTVKAEN--VSQYQSAYP------YDNIIYTEKECSTCKIPKPARSKHCSICNRCVARF  189 (396)
Q Consensus       121 ~~~~l~~~~~~~~~~~---DPG~i~~~~--~~~~~~~~p------~d~~~~~~~~C~tC~~~kP~RSkHC~~C~rCV~rf  189 (396)
                      +..++.+.....++++   |||.++++.  ..+..+.-+      -++...+.++|.+|+..||+|||||++||+||.||
T Consensus        61 if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rf  140 (299)
T KOG1311|consen   61 IFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRF  140 (299)
T ss_pred             HHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhccccccc
Confidence            3334444445555555   999999852  111111111      13334457999999999999999999999999999


Q ss_pred             ccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeeecccccccccchhHHHHHhhhhh
Q 016042          190 DHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYN  269 (396)
Q Consensus       190 DHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (396)
                      ||||||+|||||++|||||+.|+++..+.++|.+......+..........            +.....  .    ....
T Consensus       141 DHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~------------~~~~~~--~----~~~~  202 (299)
T KOG1311|consen  141 DHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVN------------LTPVLI--P----AGTF  202 (299)
T ss_pred             CCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc------------cccccc--c----hhHH
Confidence            999999999999999999999999999998888777665544322211100            000000  0    0011


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016042          270 TQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVK  307 (396)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k  307 (396)
                      ..+++.++.+++...+++++.+|++++.+|+||+|.++
T Consensus       203 ~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~  240 (299)
T KOG1311|consen  203 LSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIK  240 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhh
Confidence            12233344456666777899999999999999999655

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=5.8e-39  Score=288.43  Aligned_cols=161  Identities=38%  Similarity=0.675  Sum_probs=119.3

Q ss_pred             HHhHHhhccCCCcccCCCccc------------ccccCCCCccccccccccccCCCCCCCCccccccCcccccccccccc
Q 016042          128 FFFLLTSFADPGTVKAENVSQ------------YQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGW  195 (396)
Q Consensus       128 ~~~~~~~~~DPG~i~~~~~~~------------~~~~~p~d~~~~~~~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~W  195 (396)
                      ++|++++++|||++|..+.++            .....+.++.....++|.+|+..||+|||||+.||+||.||||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            357899999999999871111            00111223344567999999999999999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeeecccccccccchhHHHHHhhhhhhHHHHH
Q 016042          196 MNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQILLM  275 (396)
Q Consensus       196 innCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (396)
                      +|||||++|||+|++|+++..+.+++.++.....+...........           +.    .      ......++.+
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~------~~~~~~~~~~  140 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSS-----------FW----I------FSNFSSIFLL  140 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----------cc----c------chhhhHHHHH
Confidence            9999999999999999999999999988876665554332211100           00    0      0000113444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCccccccccch
Q 016042          276 VFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQ  309 (396)
Q Consensus       276 v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k~~  309 (396)
                      ++.++++++++.++++|++++++|+||+|.+||+
T Consensus       141 ~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  141 IISIFFFIFVGFLLIFQLYLILRNITTYERIKRK  174 (174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHcC
Confidence            4556677888899999999999999999998874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2e-37  Score=293.31  Aligned_cols=181  Identities=29%  Similarity=0.499  Sum_probs=128.4

Q ss_pred             ccccccccchhHHHHHHHHHHHHHhHHhhccCCCcccCCCcccccccCCCCccccccccccccCCCCCCCCccccccCcc
Q 016042          106 YYLSGFHRSSRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRC  185 (396)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~DPG~i~~~~~~~~~~~~p~d~~~~~~~~C~tC~~~kP~RSkHC~~C~rC  185 (396)
                      .+.+..+   .++..+...+.++.|+.|+++.||++|..+.++    .|-|..  -.++|..|+-+||||||||+.||||
T Consensus        44 s~~g~~n---~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe----~~~D~~--~lqfCk~CqgYKapRSHHCrkCnrC  114 (414)
T KOG1314|consen   44 SFLGVPN---QITFLLWTSMILYNYFNAIFTGPGFVPLGWKPE----NPKDEM--FLQFCKKCQGYKAPRSHHCRKCNRC  114 (414)
T ss_pred             chhhhHH---HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC----CChhHH--HHHHHhhccCcCCCccccchHHHHH
Confidence            3455566   666666777778899999999999999987664    233422  2589999999999999999999999


Q ss_pred             ccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeeecccccccccchhHHHHHh
Q 016042          186 VARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLL  265 (396)
Q Consensus       186 V~rfDHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (396)
                      |.+|||||||+|||||..||.||+.||++..+.|+-+.++.+..++..+.......     ++...     .|.+. .-.
T Consensus       115 vmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~-----~g~~h-----lp~v~-ft~  183 (414)
T KOG1314|consen  115 VMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIK-----YGLRH-----LPIVF-FTL  183 (414)
T ss_pred             HHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhh-----ccccc-----Cceee-ccH
Confidence            99999999999999999999999999999999999888777776666554432110     11110     01100 000


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016042          266 GSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETV  306 (396)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~  306 (396)
                      ......++.+.+...+.+.++.++..|+..|.+|+|.+|+.
T Consensus       184 ~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~w  224 (414)
T KOG1314|consen  184 SSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESW  224 (414)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHH
Confidence            00001111111222344556678889999999999999963

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=4.5e-34  Score=277.63  Aligned_cols=171  Identities=32%  Similarity=0.539  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHHHhHHhhccCCCcccCCCccc----ccccCCCCccccccccccccCCCCCCCCccccccCccccccccc
Q 016042          117 YTSLLGVGIGVFFFLLTSFADPGTVKAENVSQ----YQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHH  192 (396)
Q Consensus       117 ~~~~~~~~l~~~~~~~~~~~DPG~i~~~~~~~----~~~~~p~d~~~~~~~~C~tC~~~kP~RSkHC~~C~rCV~rfDHH  192 (396)
                      +...++..+...++++..++|||..++++...    ..+....++....+++|.+|+.+||+|||||+.|||||+|||||
T Consensus        60 i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHH  139 (309)
T COG5273          60 ILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHH  139 (309)
T ss_pred             hhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhhccCcc
Confidence            33344455667789999999999998543221    11122223444568999999999999999999999999999999


Q ss_pred             cccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeeecccccccccchhHHHHHhhhhhhHH
Q 016042          193 CGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQWLLGSYNTQI  272 (396)
Q Consensus       193 C~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (396)
                      |||+|||||.+|||+|++||+++.....+.++.....+........                  .+..  +.    ...+
T Consensus       140 C~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--~~----~~li  195 (309)
T COG5273         140 CPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRH------------------DTSL--AI----CFLI  195 (309)
T ss_pred             CcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC------------------ChHH--HH----HHHH
Confidence            9999999999999999999999987777666655554433221110                  0000  00    0011


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHhcCccccccccchhh
Q 016042          273 LL-MVFLAVVSLLLASFFGYHANLCRTNTTTNETVKWQDH  311 (396)
Q Consensus       273 ~~-~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k~~~~  311 (396)
                      .. ..+..++.+.+..++.+|.+++..|+||.|..+-.+.
T Consensus       196 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~  235 (309)
T COG5273         196 FGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRG  235 (309)
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccc
Confidence            11 1223345666778899999999999999998765554

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.98  E-value=3.2e-32  Score=250.87  Aligned_cols=142  Identities=30%  Similarity=0.618  Sum_probs=97.9

Q ss_pred             ccccccccCCCCCCCCccccccCccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhee
Q 016042          161 TEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV  240 (396)
Q Consensus       161 ~~~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~  240 (396)
                      ...+|.+|+-+||||+||||+||+||++|||||||+|||||.+|||||++|++++.+.+.|.++...+.....+......
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~  180 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEI  180 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            35799999999999999999999999999999999999999999999999999999999998877665554443322111


Q ss_pred             eeeeeeecc-cccccccchhHHHHHhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016042          241 YILTVYYGI-ENSFRKLAPHVVQWLLGSYNTQIL-LMVFLAVVSLLLASFFGYHANLCRTNTTTNETVK  307 (396)
Q Consensus       241 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k  307 (396)
                         +.|-+. ..-..  .+.+...--....+.+. +.++++.+.++++++..+|.++|.+|.|.+|..+
T Consensus       181 ---tay~~d~~h~~P--p~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~  244 (309)
T KOG1313|consen  181 ---TAYASDVAHVAP--PPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLI  244 (309)
T ss_pred             ---ccccCcccccCC--ChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHH
Confidence               111010 00000  01111110011112222 2333344666788899999999999999999554

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.95  E-value=1.7e-28  Score=249.20  Aligned_cols=110  Identities=39%  Similarity=0.628  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHhHHhhccCCCcccCCCcccc--cccCCCCcccccc-ccccccCCCCCCCCccccccCccccccccccc
Q 016042          118 TSLLGVGIGVFFFLLTSFADPGTVKAENVSQY--QSAYPYDNIIYTE-KECSTCKIPKPARSKHCSICNRCVARFDHHCG  194 (396)
Q Consensus       118 ~~~~~~~l~~~~~~~~~~~DPG~i~~~~~~~~--~~~~p~d~~~~~~-~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~  194 (396)
                      ..++.++..++.+.+..-+|||+++.......  .+..+.-+....+ ++|.+|.+.||.|||||++|||||+|||||||
T Consensus       373 ~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCP  452 (600)
T KOG0509|consen  373 CFIISVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCP  452 (600)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCC
Confidence            33344444555666777799999987543221  1122222222234 69999999999999999999999999999999


Q ss_pred             cccccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 016042          195 WMNNCIGERNTRYFMAFLLWHLFLCLYGIVALG  227 (396)
Q Consensus       195 WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~  227 (396)
                      |++||||.+|||+|+.|+++....+.+.++...
T Consensus       453 wi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~  485 (600)
T KOG0509|consen  453 WIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCL  485 (600)
T ss_pred             ccccccCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998877766655543

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=89.58  E-value=4.9  Score=39.59  Aligned_cols=166  Identities=16%  Similarity=0.146  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHHHHHhHHhhccCCCccc-----CCCcccccccCCCCcc-------c---cccccccccCCCCCCCCcccc
Q 016042          116 RYTSLLGVGIGVFFFLLTSFADPGTVK-----AENVSQYQSAYPYDNI-------I---YTEKECSTCKIPKPARSKHCS  180 (396)
Q Consensus       116 ~~~~~~~~~l~~~~~~~~~~~DPG~i~-----~~~~~~~~~~~p~d~~-------~---~~~~~C~tC~~~kP~RSkHC~  180 (396)
                      .+....++...++..+.+.-.-||.-.     ++..++..+..+++..       .   .+.+.|++|+.=-...-|||.
T Consensus        62 ~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHHC~  141 (309)
T COG5273          62 FIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCP  141 (309)
T ss_pred             hhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhhccCccCc
Confidence            444455566666666666666666331     1222333333333221       1   134799999999999999999


Q ss_pred             ccCccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhee-eeeeeeecccccccccchh
Q 016042          181 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV-YILTVYYGIENSFRKLAPH  259 (396)
Q Consensus       181 ~C~rCV~rfDHHC~WinnCVG~~N~r~Fl~fL~~~~~~~~y~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  259 (396)
                      .=|+||.+-.|           +=.-.|++++.+..+..++........+...-...... ..+               .
T Consensus       142 Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------i  195 (309)
T COG5273         142 WINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLAICFL---------------I  195 (309)
T ss_pred             ccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHH---------------H
Confidence            99999998655           56678888886655544444333332222111111110 000               0


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016042          260 VVQWLLGSYNTQILLMVFLAVVSLLLASFFGYHANLCRTNTTTNETVK  307 (396)
Q Consensus       260 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~~~hl~li~~n~TT~E~~k  307 (396)
                      ...+..+......+.+.+......++.....++.+.+.++.++-|...
T Consensus       196 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  243 (309)
T COG5273         196 FGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFP  243 (309)
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccc
Confidence            000111111111222222233445556677888999999999988654

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=87.83  E-value=0.56  Score=49.47  Aligned_cols=89  Identities=17%  Similarity=-0.011  Sum_probs=63.9

Q ss_pred             HHhHHhhccCCCcccCCCcccccccCCCCccccccccccccCCCCCCCCccccccCccccccccccccccccccccchhh
Q 016042          128 FFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRY  207 (396)
Q Consensus       128 ~~~~~~~~~DPG~i~~~~~~~~~~~~p~d~~~~~~~~C~tC~~~kP~RSkHC~~C~rCV~rfDHHC~WinnCVG~~N~r~  207 (396)
                      ..++..+.-+||++-.-+..-.... +--+...-...|.+|....+.+-++|..|-.++..+++||+|+. ||+.+|-..
T Consensus       292 ~~~~~~~~~~~g~i~~~~~~w~i~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~  369 (600)
T KOG0509|consen  292 GLFYFISSWLPGVIFLINSLWLIKG-LALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFD  369 (600)
T ss_pred             HHHHHHHhhccchhhhhhhHHHHhh-hhhhhhhhheeccchhhccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhh
Confidence            3455666789999876554211111 11112234579999999999999999999999999999999999 999999875


Q ss_pred             h-HHHHHHHHHH
Q 016042          208 F-MAFLLWHLFL  218 (396)
Q Consensus       208 F-l~fL~~~~~~  218 (396)
                      | +.|+++..++
T Consensus       370 ~~~~~i~~~l~~  381 (600)
T KOG0509|consen  370 FHYCFIISVLAY  381 (600)
T ss_pred             hHHHHHHHHHHH
Confidence            4 4455554433

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=85.31  E-value=4.3  Score=39.55  Aligned_cols=33  Identities=24%  Similarity=0.454  Sum_probs=30.4

Q ss_pred             CCccccccCccccccccccccccccccccchhh
Q 016042          175 RSKHCSICNRCVARFDHHCGWMNNCIGERNTRY  207 (396)
Q Consensus       175 RSkHC~~C~rCV~rfDHHC~WinnCVG~~N~r~  207 (396)
                      +.|+|+.|+..+...-|||..=|+||-+.-|+=
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC  144 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHC  144 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCC
Confidence            379999999999999999999999999988863

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=80.53  E-value=1  Score=31.47  Aligned_cols=25  Identities=28%  Similarity=0.778  Sum_probs=22.4

Q ss_pred             cccccccccCCCCCCCCccccccCc
Q 016042          160 YTEKECSTCKIPKPARSKHCSICNR  184 (396)
Q Consensus       160 ~~~~~C~tC~~~kP~RSkHC~~C~r  184 (396)
                      ...+.|..|...-|+|+..|+.||.
T Consensus        12 ~~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         12 FNKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             hcccchhcccCCCCccccccccCCC
Confidence            3568999999999999999998886

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=80.35  E-value=11  Score=33.24  Aligned_cols=29  Identities=24%  Similarity=0.604  Sum_probs=19.2

Q ss_pred             ccccccCCCCCCCCccccccCcccccccc
Q 016042          163 KECSTCKIPKPARSKHCSICNRCVARFDH  191 (396)
Q Consensus       163 ~~C~tC~~~kP~RSkHC~~C~rCV~rfDH  191 (396)
                      +.|+.|+.-...+-|||..-|.||.+--|
T Consensus        63 ~HC~~C~~CV~~~DHHC~w~~~cIG~~N~   91 (174)
T PF01529_consen   63 HHCRVCNRCVLRFDHHCPWLGNCIGRRNH   91 (174)
T ss_pred             eeccccccccccccccchhhccccccccH
Confidence            56666666666666777777777666544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	396
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	80.36

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=80.36  E-value=0.54  Score=31.10  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=21.7

Q ss_pred             ccccccccCCCCCCCCccccccCc
Q 016042          161 TEKECSTCKIPKPARSKHCSICNR  184 (396)
Q Consensus       161 ~~~~C~tC~~~kP~RSkHC~~C~r  184 (396)
                      ..+.|..|...-|+|+..|+.|+.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            468999999999999999998875